Metagenome Family F090555

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090555
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	136 residues
Representative Sequence	EDETDFVFLLNDKQSMKQLDWEGDDEFSYKGEMYDVIEKKIEDARPNDPVRQGKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Number of Associated Samples	87
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.74 %
% of genes near scaffold ends (potentially truncated)	62.04 %
% of genes from short scaffolds (< 2000 bps)	70.37 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.593 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (10.185 % of family members)
Environment Ontology (ENVO)	Unclassified (64.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (87.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 23.53% Coil/Unstructured: 51.47%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07715	Plug	40.74
PF12368	Rhodanese_C	11.11
PF00581	Rhodanese	5.56
PF08625	Utp13	4.63
PF01804	Penicil_amidase	1.85
PF13715	CarbopepD_reg_2	0.93
PF05635	23S_rRNA_IVP	0.93
PF03629	SASA	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.59 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.59 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.59 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	64.81 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	64.81 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	64.81 %
Unclassified	root	N/A	32.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.41 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	30.56 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.70 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	3.70 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	30.56 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.70 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3.70 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	30.56 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3.70 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.78 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	30.56 %
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	2.78 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.78 %
Terrimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	30.56 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.78 %
Algoriphagus hitonicola	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus hitonicola	1.85 %
Terrimonas ferruginea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	1.85 %
Algoriphagus vanfongensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus vanfongensis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_100805336	Not Available	935	Open in IMG/M
3300004157\|Ga0062590_100325113	Not Available	1214	Open in IMG/M
3300005290\|Ga0065712_10354847	Not Available	746	Open in IMG/M
3300005330\|Ga0070690_100247303	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1260	Open in IMG/M
3300005330\|Ga0070690_100268096	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1214	Open in IMG/M
3300005334\|Ga0068869_100003605	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9502	Open in IMG/M
3300005334\|Ga0068869_100352388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1200	Open in IMG/M
3300005334\|Ga0068869_100377697	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1161	Open in IMG/M
3300005335\|Ga0070666_10014345	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5044	Open in IMG/M
3300005339\|Ga0070660_100944539	Not Available	728	Open in IMG/M
3300005340\|Ga0070689_100027999	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4255	Open in IMG/M
3300005340\|Ga0070689_100867622	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	797	Open in IMG/M
3300005340\|Ga0070689_101388545	Not Available	634	Open in IMG/M
3300005365\|Ga0070688_100540160	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	885	Open in IMG/M
3300005366\|Ga0070659_100757353	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	842	Open in IMG/M
3300005441\|Ga0070700_100857870	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	736	Open in IMG/M
3300005456\|Ga0070678_100563241	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1013	Open in IMG/M
3300005457\|Ga0070662_100102017	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2173	Open in IMG/M
3300005466\|Ga0070685_10007501	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5582	Open in IMG/M
3300005545\|Ga0070695_101245010	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus vanfongensis	613	Open in IMG/M
3300005547\|Ga0070693_100143207	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1507	Open in IMG/M
3300005547\|Ga0070693_100809180	Not Available	695	Open in IMG/M
3300005548\|Ga0070665_100051272	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4139	Open in IMG/M
3300005578\|Ga0068854_102066279	Not Available	526	Open in IMG/M
3300005616\|Ga0068852_100398209	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005617\|Ga0068859_100031855	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5296	Open in IMG/M
3300005618\|Ga0068864_100056889	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3379	Open in IMG/M
3300005719\|Ga0068861_100121446	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2108	Open in IMG/M
3300005834\|Ga0068851_10154107	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1258	Open in IMG/M
3300005840\|Ga0068870_10420749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	874	Open in IMG/M
3300005841\|Ga0068863_100158471	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2168	Open in IMG/M
3300005842\|Ga0068858_100235749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1735	Open in IMG/M
3300005843\|Ga0068860_100485311	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1232	Open in IMG/M
3300006237\|Ga0097621_100059282	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3133	Open in IMG/M
3300006358\|Ga0068871_100641955	Not Available	968	Open in IMG/M
3300006358\|Ga0068871_100953765	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	797	Open in IMG/M
3300006358\|Ga0068871_102127819	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus hitonicola	534	Open in IMG/M
3300007076\|Ga0075435_100763695	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	841	Open in IMG/M
3300009093\|Ga0105240_10297977	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1846	Open in IMG/M
3300009176\|Ga0105242_11308123	Not Available	749	Open in IMG/M
3300009553\|Ga0105249_11250483	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	814	Open in IMG/M
3300010375\|Ga0105239_10146086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2637	Open in IMG/M
3300010400\|Ga0134122_10334531	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1313	Open in IMG/M
3300010400\|Ga0134122_10626892	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	998	Open in IMG/M
3300010401\|Ga0134121_10087447	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2599	Open in IMG/M
3300011119\|Ga0105246_10269178	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1361	Open in IMG/M
3300012212\|Ga0150985_117768188	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1223	Open in IMG/M
3300012519\|Ga0157352_1104914	Not Available	506	Open in IMG/M
3300012910\|Ga0157308_10289317	Not Available	595	Open in IMG/M
3300012914\|Ga0157297_10517659	Not Available	505	Open in IMG/M
3300012957\|Ga0164303_11136495	Not Available	567	Open in IMG/M
3300012958\|Ga0164299_11356634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus hitonicola	547	Open in IMG/M
3300012989\|Ga0164305_11771329	Not Available	557	Open in IMG/M
3300013296\|Ga0157374_10008954	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	8578	Open in IMG/M
3300013297\|Ga0157378_10739552	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1006	Open in IMG/M
3300013297\|Ga0157378_11418647	Not Available	738	Open in IMG/M
3300013308\|Ga0157375_10089359	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3137	Open in IMG/M
3300014325\|Ga0163163_10145555	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2413	Open in IMG/M
3300014745\|Ga0157377_10046273	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2433	Open in IMG/M
3300014968\|Ga0157379_10147133	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2125	Open in IMG/M
3300014969\|Ga0157376_10524817	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1168	Open in IMG/M
3300015077\|Ga0173483_10442206	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	679	Open in IMG/M
3300015371\|Ga0132258_11129610	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1981	Open in IMG/M
3300015371\|Ga0132258_11393782	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1771	Open in IMG/M
3300015372\|Ga0132256_102649066	Not Available	601	Open in IMG/M
3300015373\|Ga0132257_101598847	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	834	Open in IMG/M
3300017792\|Ga0163161_10069789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2569	Open in IMG/M
3300021445\|Ga0182009_10036890	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1996	Open in IMG/M
3300021445\|Ga0182009_10210239	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	951	Open in IMG/M
3300022883\|Ga0247786_1039068	Not Available	941	Open in IMG/M
3300025903\|Ga0207680_10100173	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300025908\|Ga0207643_10192927	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1237	Open in IMG/M
3300025919\|Ga0207657_10925352	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	671	Open in IMG/M
3300025919\|Ga0207657_11346754	Not Available	538	Open in IMG/M
3300025920\|Ga0207649_11344563	Not Available	565	Open in IMG/M
3300025923\|Ga0207681_10509549	Not Available	986	Open in IMG/M
3300025931\|Ga0207644_10412226	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1106	Open in IMG/M
3300025931\|Ga0207644_11086790	Not Available	672	Open in IMG/M
3300025932\|Ga0207690_10830750	Not Available	764	Open in IMG/M
3300025933\|Ga0207706_10140229	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2127	Open in IMG/M
3300025936\|Ga0207670_10121987	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300025936\|Ga0207670_10624817	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	886	Open in IMG/M
3300025936\|Ga0207670_11193752	Not Available	644	Open in IMG/M
3300025938\|Ga0207704_10099949	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1931	Open in IMG/M
3300025942\|Ga0207689_10001613	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	21369	Open in IMG/M
3300025942\|Ga0207689_11404471	Not Available	585	Open in IMG/M
3300025944\|Ga0207661_12173454	Not Available	501	Open in IMG/M
3300025945\|Ga0207679_10265562	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1466	Open in IMG/M
3300025960\|Ga0207651_10444656	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1111	Open in IMG/M
3300025986\|Ga0207658_10034916	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3598	Open in IMG/M
3300026023\|Ga0207677_10036709	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3197	Open in IMG/M
3300026035\|Ga0207703_10390580	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1289	Open in IMG/M
3300026075\|Ga0207708_10919984	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	757	Open in IMG/M
3300026089\|Ga0207648_10251427	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1576	Open in IMG/M
3300026095\|Ga0207676_11366274	Not Available	704	Open in IMG/M
3300026118\|Ga0207675_101339529	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	736	Open in IMG/M
3300026118\|Ga0207675_101589592	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	674	Open in IMG/M
3300026142\|Ga0207698_10059726	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	2962	Open in IMG/M
3300026142\|Ga0207698_10660330	Not Available	1037	Open in IMG/M
3300028381\|Ga0268264_12204112	Not Available	559	Open in IMG/M
3300033412\|Ga0310810_10218309	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2133	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	69.44%
Environmental	Environmental	30.56%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	69.44%
Terrestrial	Environmental → Terrestrial	30.56%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	32.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.41%
Soil	Environmental → Terrestrial → Soil	30.56%
Roots	Host-Associated → Plants → Roots	4.63%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	26.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.52%
Loam	Environmental → Terrestrial → Soil → Loam	15.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	26.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	10.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	10.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1008053362	3300004114	Soil	MREAIRMQSYSEHETDFAFSVNDMRLLDQFDWEGDDEFSFNGEMYDVIEKKTENGKLIIRSIADERETALLNKVKDHWNQNEKTNKVADELFQMLQSLFHSPKTEMMVLIKPTVNRNHFISLPLPSQAKTIPTPPPRSELS*
Ga0062590_1003251131	3300004157	Soil	MREAIRLQSYSQDETDFVFSLNDKQGMKQLDWEGDDEFSFNGEMYDVIEKKTGNGKLIIRSIADKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS*
Ga0065712_103548472	3300005290	Miscanthus Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC*WVLVFQKRSFI
Ga0070690_1002473032	3300005330	Switchgrass Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0070690_1002680961	3300005330	Switchgrass Rhizosphere	MRAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFLLPLQVIKIPTPPPRC*
Ga0068869_1000036052	3300005334	Miscanthus Rhizosphere	MRAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFSLPLQVIKIPTPPPRC*
Ga0068869_1003523881	3300005334	Miscanthus Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIP
Ga0068869_1003776972	3300005334	Miscanthus Rhizosphere	DEFSFNGEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC*
Ga0070666_100143453	3300005335	Switchgrass Rhizosphere	MVLKKLIVICLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0070660_1009445392	3300005339	Corn Rhizosphere	LRQEGIKAEMRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0070689_1000279994	3300005340	Switchgrass Rhizosphere	MAQLAWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC*
Ga0070689_1008676221	3300005340	Switchgrass Rhizosphere	TYSEDETDFIFSLNDKQGIKQLDWEGDDEFSFNDEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC*
Ga0070689_1013885452	3300005340	Switchgrass Rhizosphere	MKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0070687_1007768861	3300005343	Switchgrass Rhizosphere	EMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0070688_1005401602	3300005365	Switchgrass Rhizosphere	SMAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC*
Ga0070659_1007573532	3300005366	Corn Rhizosphere	HSMDQLDWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADKRETALLNTLRGHWDQNEKSNKVADELFQLLQSMFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC*
Ga0070700_1008578702	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DRHSMDQLDWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNSIRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC*
Ga0070678_1005632412	3300005456	Miscanthus Rhizosphere	NITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMRQLDWEGDDEFSYKGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0070662_1001020171	3300005457	Corn Rhizosphere	IFYLRQEGIKAEMRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0070685_100075014	3300005466	Switchgrass Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0070695_1012450101	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DKQGMKQLDWEGDDEFSFNGEMYDVIEKKTGNGKLIIRSIADKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS*
Ga0070693_1001432072	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMRQLDWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0070693_1008091801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MQTYSEGETDFIFSLTDKLAMKQLDWEGDDEFSFNGDMYDVIEKRTENGKLVIRAIADKQETALLNKAKDHWNQNEKGNKVADELFQLLQSLFHSTKTEQLVLIKPSADKISFVSFLLPLRVKKIPTPPPRSHSS*
Ga0070665_1000512722	3300005548	Switchgrass Rhizosphere	MAQLAWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0068854_1020662791	3300005578	Corn Rhizosphere	MVLKKLIVICLLVCFLLNITGYHIIFYLRQEQIKTEMRAAIRMRTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVRQGKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLHSLFHS
Ga0068852_1003982092	3300005616	Corn Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSS
Ga0068859_1000318554	3300005617	Switchgrass Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC*
Ga0068864_1000568893	3300005618	Switchgrass Rhizosphere	MRQAIRLQNYYEHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC*
Ga0068861_1001214462	3300005719	Switchgrass Rhizosphere	GEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0068851_101541072	3300005834	Corn Rhizosphere	YSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0068870_104207491	3300005840	Miscanthus Rhizosphere	DDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0068863_1001584712	3300005841	Switchgrass Rhizosphere	MRAAIRMQTYSEDETDFVFSIDDKRSMSELGWEGNDEFRFNGEMYDVIEKKTENARPNDSVGQGKLIIRAIADKRETALLNKAKDHWNENEKSNKVADELFQLLQSLFHSSKTEELVFNKPSVNRIPFISTPLPSQVKKIPTPPPRV*
Ga0068858_1002357492	3300005842	Switchgrass Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLNKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0068860_1004853112	3300005843	Switchgrass Rhizosphere	KQLDWEGDDEFSFNGEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC*
Ga0097621_1000592821	3300006237	Miscanthus Rhizosphere	VICLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMRQLDWEGDDEFSYKGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0068871_1006419551	3300006358	Miscanthus Rhizosphere	MVLKKLIVICLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEEL
Ga0068871_1009537651	3300006358	Miscanthus Rhizosphere	MRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0068871_1021278191	3300006358	Miscanthus Rhizosphere	SEDETDFVFLLNDKQSMRQLDWEGDDEFSYKGEMYDVIESKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0075435_1007636952	3300007076	Populus Rhizosphere	WEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0105251_101783751	3300009011	Switchgrass Rhizosphere	KGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEVFVLIKPLVHRIPFISFLLPLQVIKIPTPPPRC*
Ga0105240_102979771	3300009093	Corn Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKTEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0105242_113081232	3300009176	Miscanthus Rhizosphere	YLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0105249_112504831	3300009553	Switchgrass Rhizosphere	LAVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLDWEGEDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0105239_101460863	3300010375	Corn Rhizosphere	MRTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSANRIPFISLPLPSQVKKIPTPPPRV*
Ga0134122_103345312	3300010400	Terrestrial Soil	IVIFLSVCFLLNITGYHIIFYLRQEAIKADMRQAIRMQAYSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLNKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0134122_106268921	3300010400	Terrestrial Soil	MVLKKLIVILLSLCFLSNITGYHIIFYFSQEKIKSEMREAIRMQTYSEGETDFIFSLTDKQAMKQLDWEGDDEFSFNGDMYDVIEKRTENGKLVIRAIADKQETALLNKAKDHWNQNEKSNKVADELFQLLQSLFHSTKTEQLVLIKPSADKISFVSFLLPLGVKKISTPPPRSYSS*
Ga0134121_100874471	3300010401	Terrestrial Soil	TEMRAAIRMQTYSEDETDFVFLLNDKQSMNQLNWEGDDEFSYKGEMYDVIEKKIEDARPNDPVRQGKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0105246_102691781	3300011119	Miscanthus Rhizosphere	NDKQSMKQLDWEGDDEFSFNGEMYDVIERKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0150985_1177681882	3300012212	Avena Fatua Rhizosphere	YHIIFYLRHEGIKTEMREVIRMQTYNENETDFVFSLNDKKAMKQLEWEGDDEFSFNGDMYDVIEKNTDNGKLIIRALADKKETALLNNTKDKWSHEEKSNKVTDELFQLLQSLFHSTRTEELVFIKPLENRTAFISLPLPSQLKKIPTPPPRTWLS*
Ga0157352_11049141	3300012519	Unplanted Soil	LDWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNSIRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC*
Ga0157308_102893171	3300012910	Soil	AIGLKSYNQDETDFVFSLNDKKGMKQLDWEGDDELSFNGEMYDVIEKKTGNGKLIIRSITDKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS*
Ga0157297_105176591	3300012914	Soil	FRQEGIKAEMREAIRLQSYSQDETDFVFSLNDKQGMKQLDWEGDDEFSFNGEMYDVIEKKTGNGKLIIRSIADKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS*
Ga0164303_111364951	3300012957	Soil	KRSMSGLDWEGNDEFRFNGEMYDVIEKKTENARPNDSVGQGKLIIRAIADKRETALLNKAKDHWNENEKSNKVADELFQLLQSLFHSSKTEELVFNKPSSNRASFISLPLPSQVKKIPTPPPRC*
Ga0164299_113566341	3300012958	Soil	QEEIKSEMRAAIRLQSYSEHETDFAFSLNERHAMDQLDWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNAIRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC*
Ga0164305_117713291	3300012989	Soil	YLRQEQIKTEMRAAIRMQIYSEDETDFVFLLNDKQSMRQLDWEGDDEFSYKGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLNKVKDDWNQNEKSNKVADELFQLLQSLFHSSKAEEFVLIKPSVNRISFISLSLPSQVKKIPTPPPRV*
Ga0157374_100089542	3300013296	Miscanthus Rhizosphere	MVLKKLIVICLLVCFLLNITGYHIIFYLRQEQIKTEMRVAIRMRTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0157378_107395521	3300013297	Miscanthus Rhizosphere	WEGDDEFSFNGEMYDVIEKKTENGKRIIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC*
Ga0157378_114186471	3300013297	Miscanthus Rhizosphere	LRQEQIKTEMRAAIRMRTYSEDETDFVFLLNEKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0157378_126012671	3300013297	Miscanthus Rhizosphere	MYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKRLVHRMSFISSSLPSQVIKIPTPPPRCWSRLNLSNGYNY*
Ga0157375_100893594	3300013308	Miscanthus Rhizosphere	YLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0163163_101455551	3300014325	Switchgrass Rhizosphere	HETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC*
Ga0157377_100462732	3300014745	Miscanthus Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSTKQLNWEGDDEFSFNGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0157379_101471332	3300014968	Switchgrass Rhizosphere	MVLKKLIVISLAVCFLLNITGYHIIFYLRQEQIKTEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLNKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV*
Ga0157376_105248172	3300014969	Miscanthus Rhizosphere	LKKLIVIFLLVCFLLNITGYHIIFYLQQEQIKAEMREAIRMQTYSEHETDFVFSIDDKRSMSELGWEGNDEFRFNGEMYDVIEKKTENARPNDSVGQGKLIIRAIADKRETALLNKAKDHWNENEKSNKVADELFQLLQSLFHSSKTEELVFNKPSVNRIPFISTPLPSQVKKIPTPPPRV*
Ga0173483_104422062	3300015077	Soil	EFSFNGEMYDVIEKKTGNGKLIIRSIADKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS*
Ga0132258_111296101	3300015371	Arabidopsis Rhizosphere	MVKNLIVIFLSLCFLLNISGYHFIFYLKQEAIKAEMREAIRMQTYSEHETDFSFSVNDKRSMDQLAWEGDDEFKFNGEMYDVIEKKIDNGKLVIRSIADRRETALLNKVKDHWNQNEKSNKVADELFKLLQSLFHSSNGEELVFIKPLVNKISFVSFALPSEVIKIPTPPPRSQQ
Ga0132258_113937822	3300015371	Arabidopsis Rhizosphere	VKKLIVIFLSLCFLLNITGYQVIFYLRQQEIKAEMREAIRMQAYSEHETDFSFSVNDRHWMDQLDWQGKGEFCFNGEMYDVIEKKIENGKMIIRSIADQRETALLNKAKDQWNQSEKSNRAAGELFQVLQSLFHASKTDEVVYIKPLKDNILFISPQLPSQVKQIPTPPPRC*
Ga0132256_1026490661	3300015372	Arabidopsis Rhizosphere	ETDFSVSVNDKHSMDQLDWEGDDEFSFNGEMYDVIEKRIENGNLIIRAIADKREMALLNKVKDHWNQSEKSNKVADELFQLLQSLFHSSKAEELLFIKPLVDRNSFISLPLPSQVKQIPTPPPRC*
Ga0132257_1015988472	3300015373	Arabidopsis Rhizosphere	DFVFSLNDKQDMKQLDWEGNDEFSYNGEMYDVIEKKTEDGKLIIRSIADKRETALLNKAKDHWSQNEKSNKVADELFQLLQSLFHSPKTEELVLIKPSVNMVSFISLQLPSQVKKIPTPPPKGVIS*
Ga0163161_100697893	3300017792	Switchgrass Rhizosphere	EDETDFVFLLNDKQSMKQLDWEGDDEFSYKGEMYDVIEKKIEDARPNDPVRQGKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0182009_100368902	3300021445	Soil	MALKKLIAIIISCCFLLDIIGYHIIFYLRQEGIKAEMREAIRMQTKSELETDFVFDLNDKRAMKQLNWEGDDEFSFNGEMYDVIEKKIENAGLNDLGQRKLIIRALADKKETTLINNSKNKWGHDEKSNKAADDLFQLLQSLFHSSTTDEFAVIRPLANKFYFISPLLPLPVKKILTPPPQAC
Ga0182009_102102391	3300021445	Soil	MRAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFLLP
Ga0247786_10390681	3300022883	Soil	MREAIRLQSYSQDETDFVFSLNDKQGMKQLDWEGDDEFSFNGEMYDVIEKKTGNGKLIIRSIADKQETTLLNDAKDHWNQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPLS
Ga0207656_102441952	3300025321	Corn Rhizosphere	GEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207680_101001732	3300025903	Switchgrass Rhizosphere	MVLKKLIVICLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKP
Ga0207643_101929272	3300025908	Miscanthus Rhizosphere	MVLKKLITIFLCVCFLLNITGYHIIFYVQREQIKAEMREAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDARPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207657_109253522	3300025919	Corn Rhizosphere	ETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDQWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC
Ga0207657_113467541	3300025919	Corn Rhizosphere	LSDKQGIKQLDWEGDDEFSFNGEMYDVIEKKTENGKRIIRAIADQQETALLKKAKDHWDQNEKSNKVADELFQLLQSLFHSPKTEDLVLIKPSVNMVSVISLRLPCQVKKIPTPPPRSPL
Ga0207649_113445632	3300025920	Corn Rhizosphere	DEFSFNGEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC
Ga0207681_105095492	3300025923	Switchgrass Rhizosphere	MRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC
Ga0207659_102332021	3300025926	Miscanthus Rhizosphere	IEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC
Ga0207644_104122262	3300025931	Switchgrass Rhizosphere	INDGKSMAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSITDKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC
Ga0207644_110867901	3300025931	Switchgrass Rhizosphere	EMREAICMQAYSEDETDFVFSVDDKRSMSGLDWEGNDEFRFNGEMYDVIEKKTENARPNDSVGQGKLIIRAIADKRETALLNKAKDHWNENEKSNKVADELFQLLQSLFHSSKTEELVFNKPSVNRIPFISTPLPSQVKKVPTPPPRV
Ga0207690_108307502	3300025932	Corn Rhizosphere	MRAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADKRETALLNTLRGHWNQNEKSNKVADELFQLLQSMFHPSRTEELVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC
Ga0207706_101402292	3300025933	Corn Rhizosphere	IFYLRQEGIKAEMRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC
Ga0207670_101219872	3300025936	Switchgrass Rhizosphere	MREAIRLQNYNEHETDFSFSINNRKSMAQLAWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC
Ga0207670_106248172	3300025936	Switchgrass Rhizosphere	RAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFLLPLQVIKIPTPPPRC
Ga0207670_111937522	3300025936	Switchgrass Rhizosphere	SMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207704_100999491	3300025938	Miscanthus Rhizosphere	LNDKQGIKQLDWEGDDEFSFNGEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAEC
Ga0207689_1000161311	3300025942	Miscanthus Rhizosphere	MRAAIRLQSYNAQETDFVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFSLPLQVIKIPTPPPRC
Ga0207689_114044711	3300025942	Miscanthus Rhizosphere	MRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIP
Ga0207661_121734541	3300025944	Corn Rhizosphere	DEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDQWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC
Ga0207679_102655622	3300025945	Corn Rhizosphere	MRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIERKIEDARTNNPVRQGKLIIRSIADKQETTLLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207651_104446562	3300025960	Switchgrass Rhizosphere	DDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207658_100349164	3300025986	Switchgrass Rhizosphere	MAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC
Ga0207677_100367094	3300026023	Miscanthus Rhizosphere	MRQLDWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPR
Ga0207703_103905802	3300026035	Switchgrass Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLNKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207708_109199842	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DFAFSVNDRHSMDQLDWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNSIRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC
Ga0207648_102514271	3300026089	Miscanthus Rhizosphere	NDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFISLQLPSQVRTIPTPPPRC
Ga0207648_108730332	3300026089	Miscanthus Rhizosphere	DEFSLKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRIPFISFLLPLQVIKIPTPPPRC
Ga0207676_113662742	3300026095	Switchgrass Rhizosphere	EGIKAEMRQAIRLQNYYEHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKQIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNRISFISLQLPSQVRTIPTPPPRC
Ga0207675_1013395292	3300026118	Switchgrass Rhizosphere	YSEDETDFVFLLNDKQSMKQLNWEGDDEFSYKGEMYDVIEKKIEDAPPNDPVGQAKLIIRSIADKQETALLDKVKDHWNQNEKSNKVADELFQLLQSLFHSSKAEELVLIKPSVNRIPFISLPLPSQVKKIPTPPPRV
Ga0207675_1015895921	3300026118	Switchgrass Rhizosphere	FVFSVNDRRVMDQLGWEGDDEFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNSIRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKPLVHRMSFISSSLPSQVIKIPTPPPRC
Ga0207698_100597263	3300026142	Corn Rhizosphere	MVLKKLIVIFLLVCFLLNITGYHIIFYLRQEQIKAEMRAAIRMQTYSEDETDFVFLLNDKQSMKQLNWEGDDEFSFNGEMYDVIEKKIEDARPNDPVGQAKLVIRSIADKQETALLDKVKDHWNQNEKSN
Ga0207698_106603301	3300026142	Corn Rhizosphere	MRQAIRLQNYNDHETDFSFSINDGKSMAQLDWEGDDEFRFNGEMYDVIDKKIENGKLIIRSIADKRETALLNKVKDHWNQNEKSNKVADELFQMLQSLFHSSKTDELVLIKPSVNSISFI
Ga0268266_108981471	3300028379	Switchgrass Rhizosphere	EFSFKGEMYDVIEKKIEDGKLIIRSIADRRETALLNALRGHWNQNEKSNKVADELFQLLQSLFHSSRTEEFVLIKRLVHRMSFISSSLPSQVIKIPTPPPRC
Ga0268264_122041122	3300028381	Switchgrass Rhizosphere	GIKQLDWEGDDEFSFNGEMYDVIEKKTENGKRVIRAIADQQETALLKKAKDHWDQNEKSNKAADELYHLLQSLFHSSGTEEFVFIKPSVNKISFISLQLPSEVTKIPTPPPRAECC
Ga0310810_102183092	3300033412	Soil	MREAIRMQSYSEHETDFAFSVNDMRLLDQFDWEGDDEFSFNGEMYDVIEKKTENGKLIIRSIADERETALLNKVKDHWNQNEKTNKVADELFQMLQSLFHSPKTEMMVLIKPTVNRNHFISLPLPSQAKTIPTPPPRSELS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090555

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences