NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090550

Metagenome Family F090550

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090550
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 64 residues
Representative Sequence MKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHEKPAEEE
Number of Associated Samples 87
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.65 %
% of genes near scaffold ends (potentially truncated) 37.96 %
% of genes from short scaffolds (< 2000 bps) 76.85 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.370 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere
(6.481 % of family members)
Environment Ontology (ENVO) Unclassified
(42.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.630 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00578AhpC-TSA 28.70
PF08534Redoxin 18.52
PF00171Aldedh 6.48
PF03631Virul_fac_BrkB 3.70
PF02618YceG 2.78
PF03840SecG 1.85
PF13515FUSC_2 1.85
PF01797Y1_Tnp 1.85
PF13604AAA_30 0.93
PF00005ABC_tran 0.93
PF04390LptE 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 6.48
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 6.48
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 6.48
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 3.70
COG1559Endolytic transglycosylase MltG, terminates peptidoglycan polymerizationCell wall/membrane/envelope biogenesis [M] 2.78
COG1314Protein translocase subunit SecGIntracellular trafficking, secretion, and vesicular transport [U] 1.85
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 1.85
COG2980Outer membrane lipoprotein LptE/RlpB (LPS assembly)Cell wall/membrane/envelope biogenesis [M] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.37 %
UnclassifiedrootN/A4.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12676208All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis1045Open in IMG/M
3300000955|JGI1027J12803_100266102All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1922Open in IMG/M
3300002090|JGI24806J26614_1002447All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis6289Open in IMG/M
3300004114|Ga0062593_100029029All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3110Open in IMG/M
3300004114|Ga0062593_100198322All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1595Open in IMG/M
3300004463|Ga0063356_100006600All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea10192Open in IMG/M
3300004480|Ga0062592_102536396All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium516Open in IMG/M
3300004643|Ga0062591_101978887All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes600Open in IMG/M
3300005294|Ga0065705_10053088All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes956Open in IMG/M
3300005328|Ga0070676_10010464All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae5035Open in IMG/M
3300005328|Ga0070676_11521342All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium516Open in IMG/M
3300005330|Ga0070690_100070374All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae2272Open in IMG/M
3300005330|Ga0070690_100218011All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales1336Open in IMG/M
3300005331|Ga0070670_100672374All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes930Open in IMG/M
3300005332|Ga0066388_100197383All Organisms → cellular organisms → Bacteria2630Open in IMG/M
3300005332|Ga0066388_100872777All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea1482Open in IMG/M
3300005332|Ga0066388_101072496All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300005332|Ga0066388_105378027All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes649Open in IMG/M
3300005333|Ga0070677_10328840All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes785Open in IMG/M
3300005333|Ga0070677_10873482All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes518Open in IMG/M
3300005335|Ga0070666_10891603All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes657Open in IMG/M
3300005340|Ga0070689_100103000All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales2262Open in IMG/M
3300005340|Ga0070689_100719803All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes873Open in IMG/M
3300005340|Ga0070689_101150927All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes695Open in IMG/M
3300005364|Ga0070673_101882083All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes567Open in IMG/M
3300005367|Ga0070667_100017537All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5935Open in IMG/M
3300005367|Ga0070667_100262058All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300005446|Ga0066686_10938195All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga566Open in IMG/M
3300005450|Ga0066682_10185076All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1332Open in IMG/M
3300005456|Ga0070678_102318353All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes509Open in IMG/M
3300005459|Ga0068867_100226777All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1508Open in IMG/M
3300005544|Ga0070686_100491723All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes950Open in IMG/M
3300005569|Ga0066705_10519584All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes743Open in IMG/M
3300005576|Ga0066708_10892333All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes555Open in IMG/M
3300005834|Ga0068851_10828351All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes576Open in IMG/M
3300006046|Ga0066652_100047340All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3215Open in IMG/M
3300006237|Ga0097621_100173449All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1860Open in IMG/M
3300006237|Ga0097621_100793442All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae877Open in IMG/M
3300006237|Ga0097621_102086532All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes542Open in IMG/M
3300006358|Ga0068871_100743357All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae901Open in IMG/M
3300006358|Ga0068871_101963978All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium557Open in IMG/M
3300006854|Ga0075425_100376888All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1634Open in IMG/M
3300006854|Ga0075425_100740472All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300006871|Ga0075434_100706737All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1025Open in IMG/M
3300006903|Ga0075426_11513938All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium510Open in IMG/M
3300006954|Ga0079219_11869210All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae565Open in IMG/M
3300009545|Ga0105237_10704649All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1016Open in IMG/M
3300009553|Ga0105249_10519719All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1237Open in IMG/M
3300010358|Ga0126370_10726921All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes876Open in IMG/M
3300010358|Ga0126370_12668160All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium500Open in IMG/M
3300010359|Ga0126376_11789129All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes652Open in IMG/M
3300010360|Ga0126372_10337466All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1345Open in IMG/M
3300010362|Ga0126377_12047263All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300010362|Ga0126377_12396763All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium604Open in IMG/M
3300010373|Ga0134128_12051574All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes630Open in IMG/M
3300010376|Ga0126381_105071410All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium504Open in IMG/M
3300010397|Ga0134124_11804333All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes646Open in IMG/M
3300010397|Ga0134124_12006577All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes616Open in IMG/M
3300010399|Ga0134127_11581199All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes729Open in IMG/M
3300010400|Ga0134122_10436730All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1167Open in IMG/M
3300010937|Ga0137776_1676600All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes740Open in IMG/M
3300011438|Ga0137451_1000408All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae12937Open in IMG/M
3300012201|Ga0137365_10055701All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae2987Open in IMG/M
3300012212|Ga0150985_104953104All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1747Open in IMG/M
3300012212|Ga0150985_119446733All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1505Open in IMG/M
3300012350|Ga0137372_10053706All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea3546Open in IMG/M
3300012353|Ga0137367_10465540All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium892Open in IMG/M
3300012354|Ga0137366_11248346All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes503Open in IMG/M
3300012960|Ga0164301_11548652All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes548Open in IMG/M
3300012961|Ga0164302_10275093All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1084Open in IMG/M
3300013102|Ga0157371_10254426All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1265Open in IMG/M
3300013296|Ga0157374_11021518All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes846Open in IMG/M
3300013297|Ga0157378_10298203All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae1559Open in IMG/M
3300013306|Ga0163162_13212377All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium524Open in IMG/M
3300013308|Ga0157375_10132808All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2610Open in IMG/M
3300014166|Ga0134079_10689698All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium519Open in IMG/M
3300014301|Ga0075323_1055038All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes784Open in IMG/M
3300014969|Ga0157376_10112882All Organisms → cellular organisms → Bacteria2395Open in IMG/M
3300014969|Ga0157376_11640999All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes678Open in IMG/M
3300015373|Ga0132257_100793211All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1182Open in IMG/M
3300015374|Ga0132255_100177595All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2996Open in IMG/M
3300017792|Ga0163161_10542664All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes952Open in IMG/M
3300017927|Ga0187824_10108112All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes899Open in IMG/M
3300018068|Ga0184636_1017463All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2165Open in IMG/M
3300018482|Ga0066669_10100599All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2006Open in IMG/M
3300018482|Ga0066669_10104370All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300019888|Ga0193751_1032915All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2404Open in IMG/M
3300020021|Ga0193726_1000601All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes36353Open in IMG/M
3300021478|Ga0210402_10326182All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1423Open in IMG/M
3300022883|Ga0247786_1060683All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes777Open in IMG/M
3300022898|Ga0247745_1091657Not Available518Open in IMG/M
3300025901|Ga0207688_10716389All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium633Open in IMG/M
3300025903|Ga0207680_10488898All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes876Open in IMG/M
3300025904|Ga0207647_10791181All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium511Open in IMG/M
3300025905|Ga0207685_10457163All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes665Open in IMG/M
3300025930|Ga0207701_10020754All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter6294Open in IMG/M
3300025936|Ga0207670_10021393All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3990Open in IMG/M
3300025938|Ga0207704_11033099All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes696Open in IMG/M
3300025940|Ga0207691_10409407All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1156Open in IMG/M
3300025981|Ga0207640_10443090All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1068Open in IMG/M
3300031716|Ga0310813_10203623All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1624Open in IMG/M
3300031740|Ga0307468_100900021All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae767Open in IMG/M
3300031940|Ga0310901_10575984All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes513Open in IMG/M
3300033004|Ga0335084_10263972All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1783Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.48%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere6.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.63%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.63%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere4.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.63%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.93%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.93%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002090Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDAEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1267620823300000789SoilMKLQSFIINLLIIIFFALISYGLTGSIAVKSSMGIILSLVSLGATITFLCLLPKLHQQPSDEEKTDG*
JGI1027J12803_10026610233300000955SoilMNLPLIISRLLIIIFFALISYGLTGSIAVRSTMGTVLAIISLGATVVFLYLLPKLYEAPKEEERASE*
JGI24806J26614_100244753300002090SoilMNPLLIISRLLIIVFFGLISYGLTGSIAVKSTIGIILAIVSLGAAIVFVYLLPKLYQQPNEEDRSNEAI*
Ga0062593_10002902913300004114SoilMKLPSIITNLLAIIFFGLISYGLTGSIAVKSTMGIILALIGLGAGIVFLYLLPK
Ga0062593_10019832223300004114SoilMKLPSFIINLIVVVFFALISYGLTASIAVKSTMGIILALVSLGATITFLCLLPKLKQQPGEEEGTEG*
Ga0063356_10000660033300004463Arabidopsis Thaliana RhizosphereMKLPSFIINVFIVVFFALISYGLTGSIAVKSTMGIILSLVSLGATIAFVCLLPKLHEQPVDEEKADG*
Ga0062592_10253639613300004480SoilMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLVATITFVCLLPKLYRQSAEEDKTEG*
Ga0062591_10197888723300004643SoilMKLPSIITNLLAIIFFGLISYGLTGSIAVKSTMGIILALIGLGAGIVFLYLLPKLYQQSGEEERADG*
Ga0065705_1005308813300005294Switchgrass RhizosphereMKLSSFLIKLLVIAFFALISYGLAGSIAVRSTMGNILALISLGATITFLYLLAKLKQQYGEEERTDG*
Ga0070676_1001046443300005328Miscanthus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG*
Ga0070676_1152134213300005328Miscanthus RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIF
Ga0070690_10007037433300005330Switchgrass RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE*
Ga0070690_10021801123300005330Switchgrass RhizosphereMKLQSLIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0070670_10067237423300005331Switchgrass RhizosphereMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0066388_10019738323300005332Tropical Forest SoilMNLSLIIGRVLIIFFFALISYGLTGSIAVKSTTGIILAVISLGATAVFLYLLPKLYEQRPEEGE*
Ga0066388_10087277733300005332Tropical Forest SoilMNFPLIISRLLIIGFFALISYGLTASIAVKSTMGVILAIISLAASVVFLYLLPKLFQQPNEEEVSEG*
Ga0066388_10107249613300005332Tropical Forest SoilKNRLMNLPLIIGRLLMIVFFALISYGLTGSIAVKSTMGIVLSIISLGATAVFLYLLPKLYEVPKEEERAPE*
Ga0066388_10537802723300005332Tropical Forest SoilMKVPSFIINLIVIVFFALISYGLTGSIAVKSMMGIILASVSLIATVCCLFLLPKLYHNPSEEETTES*
Ga0070677_1032884013300005333Miscanthus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLY
Ga0070677_1087348223300005333Miscanthus RhizosphereYHRQKHSLMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0070666_1089160323300005335Switchgrass RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFL
Ga0070689_10010300033300005340Switchgrass RhizosphereVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATFLYLLPKLKEQPREEDRTDA*
Ga0070689_10071980323300005340Switchgrass RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQ
Ga0070689_10115092713300005340Switchgrass RhizosphereSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG*
Ga0070673_10188208323300005364Switchgrass RhizosphereLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG*
Ga0070667_10001753713300005367Switchgrass RhizosphereLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE*
Ga0070667_10026205813300005367Switchgrass RhizosphereMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHEKPAEEE*
Ga0066686_1093819513300005446SoilMNLLLIIIRLLTIIFFALISYGLTGSIAVKSPMGIILAIISLGATVVFLYLLPKL
Ga0066682_1018507633300005450SoilMNLLLIIIRLLTIIFFALISYGLTGSIAVKSPMGIILAIISLGATVVFLYLLPKLYQQPSDED*
Ga0070678_10231835323300005456Miscanthus RhizosphereMKLPSFIINLLLIIFFALISYGLTGSIAVKSTMGIILSLISLGATITFAYLLPKLYQQTSDDE*
Ga0068867_10022677733300005459Miscanthus RhizosphereMKFSSLVINLAVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE*
Ga0070684_10075020223300005535Corn RhizosphereMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCL
Ga0068853_10086614713300005539Corn RhizosphereMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLC
Ga0070686_10049172313300005544Switchgrass RhizosphereNLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE*
Ga0066705_1051958413300005569SoilNISYPYAYAHQRDFKNRLMKLPLLISRLLVIIFFALISYGLTGSIAVRSTLGIILAVISLGAAVVFLYLLPKLYQQSNEEDQKDDFRLRI*
Ga0066708_1089233323300005576SoilNLLLIIIRLLTIIFFALISYGLTGSIAVKSPMGIILAIISLGATVVFLYLSPKLYQQPSDED*
Ga0068851_1082835123300005834Corn RhizosphereMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEE
Ga0066652_10004734053300006046SoilMNLPLIIGHLLIIIFFALISYGLTANIAVKSTMGVVLAIVSLGATVVFLYLLPKLYEPPREKERLLE*
Ga0097621_10017344933300006237Miscanthus RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPR
Ga0097621_10079344213300006237Miscanthus RhizosphereMKLSSFITNLLVIVFFALISYGLTGSIAVKSTMGIVLALVSLGATITFLYLLPKLSEQPREEEGTDDN*
Ga0097621_10208653213300006237Miscanthus RhizosphereIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG*
Ga0068871_10074335723300006358Miscanthus RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLP
Ga0068871_10196397823300006358Miscanthus RhizosphereMKLPSFIINLLLIIFFALISYGLTGSIAVKSTMGIILSLISLGATITFAYLLPKLYQQPSDDE*
Ga0075425_10037688833300006854Populus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLVATITFVCL
Ga0075425_10074047213300006854Populus RhizosphereLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLSKLHEKPAEEE*
Ga0075434_10070673723300006871Populus RhizosphereMRSIPKMNPLLIISRLLIIAFFALISYALTGSIAVKNTMGTILGIISLGAAIVFLYLLPKLYQQPTDEERAEG*
Ga0075426_1151393813300006903Populus RhizosphereMKLPLLISRLLVIIFFALISYGLTGSIAVRSVLGIILAIISLGAAVIFLYLLPKLYQQSNEEEDQKDDFRLRI*
Ga0079219_1186921013300006954Agricultural SoilIIFFGLISYGLTGSIAVKSTMGIILALIGLGAGIVFLYLLPKLYQQPAEEERADG*
Ga0105237_1070464913300009545Corn RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYL
Ga0105249_1051971913300009553Switchgrass RhizosphereMKFSSLVINLAVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATFLYLL
Ga0126370_1072692123300010358Tropical Forest SoilMNLRIIITRLGIIIFFGLISYGLTGSIAVKSTLGIILAIVSLSAAVVFLYLLPKLYQQPNEEER*
Ga0126370_1266816023300010358Tropical Forest SoilMKLPSFIVNLLIIVFFGLISYGLTGSIAAKSTMGIILALISLGATVTFLYLLPKLHQQPAEEERTEG*
Ga0126376_1178912923300010359Tropical Forest SoilMKLSSFIINVLIIAFFALVTYGLTGSIAVKSTMGIILALVSLAAAAMFLYLLPKLYQQPREEEKTEG*
Ga0126372_1033746623300010360Tropical Forest SoilMNLPLIIGRLLMIVFFALISYGLTGSIAVKSTMGIVLSIISLGATIVFLYLLPKLYEAPREEDRAPE*
Ga0126377_1204726313300010362Tropical Forest SoilMKLPSFVINLIVIVFFALISYGLTGSIAVKSTMGIILALVSLGATITFLCLLPKLRQQPGEEEGTER*
Ga0126377_1239676323300010362Tropical Forest SoilMKLSSFIINLILIVVFALISYGLTGSIAVKSTMGVILALISLGATITFVCLLPKLKQQPGEEEGTEG*
Ga0134128_1205157413300010373Terrestrial SoilKHSLMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0126381_10507141013300010376Tropical Forest SoilMNLRLIITRIGIIIFFGLISYGLTGSIAVKSTLGIILAIVSLSAAGVFLYLLPKLYQQPEEE
Ga0134124_1180433323300010397Terrestrial SoilSKHSLMKLPSFIINLIVVVFFALISYGLTASIAVKSTMGIILALVSLGATITFLCLLPKLKQQPGEEEGTEG*
Ga0134124_1200657723300010397Terrestrial SoilKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0134127_1158119923300010399Terrestrial SoilMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLVATITFVCLLPKLYRQPAEEDKTEG*
Ga0134122_1043673033300010400Terrestrial SoilMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFAYLLPKLYQHPADKE
Ga0137776_167660023300010937SedimentMNLYLFISRLLVIVVFALISYSLTGSIAVRSTMGIILAVVSLSATAVFLYLLPKLYQRPNGEDARESR*
Ga0137451_1000408123300011438SoilMNLRLIIGRIFTIAVFAVISYLLTSSIAERSVMGIILAVISLGATVMFLYLLPKLYQQPESEDETSEV*
Ga0137365_1005570133300012201Vadose Zone SoilMRSIQRMNPLLIISRLLIIVFFALISYGLTGSIAVKSTLGTILAIISLGAAIVFLYLLPKLYQQPTEEDQL*
Ga0150985_10495310423300012212Avena Fatua RhizosphereMKLPSFIINLLIIIFLALITYGLTGSIAVKSTMGIILSLISLVATITFAYLLPKLYQQPADEERTDGELGN*
Ga0150985_11944673323300012212Avena Fatua RhizosphereMKLPSFIINLLLIVFFALISYGLTGSIAVKSTMGIILSLISLVATITFAYLLPKLYQQPDEEKTDG*
Ga0137372_1005370623300012350Vadose Zone SoilMNPLLIISRLLIIVFFALISYGLTGSIAVKSTLGTILAIISLGAAIVFLYLLPKLYQQPTEEDQL*
Ga0137367_1046554023300012353Vadose Zone SoilMRSIPKVNLLLIISRLLIIVFFGLISYGLTGSIAVKSTMGTILAIISLGAAIVFLYLLPKLYQQPTDKEKADG*
Ga0137366_1124834613300012354Vadose Zone SoilMNPLLIISRLLIIVFFALISYGLTGSIAVKSTLGTILAIISLGAAIVFLYLLPKLYRQPTDEERAER*
Ga0164301_1154865223300012960SoilIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG*
Ga0164302_1027509323300012961SoilMKLQSFIINLVVIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHEKPAEEE*
Ga0157371_1025442613300013102Corn RhizosphereMKFSSLVINLAVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATF
Ga0157374_1102151813300013296Miscanthus RhizosphereMKFSSLVINLAVIVFFALISHGLTGSIAVKSTIGIVLALVSLGATATFLYLLPKLKEQ
Ga0157378_1029820333300013297Miscanthus RhizosphereMKLQSFIINLVVIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0163162_1321237723300013306Switchgrass RhizosphereMKFSSLVINLAVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATFLYLLPKLKEQPREEDRTDA*
Ga0157375_1013280823300013308Miscanthus RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATFLYLLPKLKEQPREEE*
Ga0134079_1068969823300014166Grasslands SoilMNLPLIIGRLLIIIFFALISYGLTANIAVKSTMGVVLAIVSLGATVVFLYLLPKLYEPPREKERLSE*
Ga0075323_105503823300014301Natural And Restored WetlandsMKLPLFFSRLLVIVFFAIISYSLTGSIAVRSTMGIVLAIVSLGAAIVFLYLLPKLYQQPNEEENYGE*
Ga0157376_1011288213300014969Miscanthus RhizosphereHRQKHSLMKLQSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLPKLHQKSAEEE*
Ga0157376_1164099923300014969Miscanthus RhizosphereMKLQSFIINLLLIIFFALISYGLTGSIAVKSTMGIILSLISLGATITFAYLLPKLYQQTSDDE*
Ga0132257_10079321123300015373Arabidopsis RhizosphereMKLPSLFINLLIIIFFALISYGLTGSIAVKSTMGIILAMVSLGATIMFLYLLPKLKQQPTEEEADG*
Ga0132255_10017759523300015374Arabidopsis RhizosphereMKLPSLFINLLTIIFFALISYGLTGSIAVKSTMGIILAMVSLGATIMFLYLLPKLKQQPTEEEGADG*
Ga0163161_1054266413300017792Switchgrass RhizosphereFMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE
Ga0187824_1010811223300017927Freshwater SedimentMNFRLFGTRLLVIVFFGLISYSLTGSIAVGSTMGIILAIVSLGATIVFLYLLPKLYQQPSEEEK
Ga0187785_1045311823300017947Tropical PeatlandMNLSLFISRLLVIVFFALISYSLTGSIAVRSTMGIILAVVSLVAAAVFLYL
Ga0184636_101746333300018068Groundwater SedimentMNLRLIIGRIFTIAVFAVISYLLTSSIAERSVMGIILAVISLGATVMFLYLLPKLYQQPESEDETSEV
Ga0066669_1010059913300018482Grasslands SoilMNLLLIIIRLLTIIFFALISYGLTGSIAVKSPMGIILAIISLGATVVFLYLLPKLYQQPSDED
Ga0066669_1010437013300018482Grasslands SoilMKLPLLISRLLVIIFFELISYGLTGSIAVRSILGIILAVINLGAAVVFLYLLPKLYQQSN
Ga0193751_103291533300019888SoilMNFPVIIIRLLTIAFFALISYVLTGSIAVRSTTGVILAIISLGATVMFLYLLPKLYQQPNEEERSNG
Ga0193726_1000601113300020021SoilMKPSLLMLRLLAIVFFALISYGLTGSIAVKSWTGTILAIVSLGATIIFLYLLPKLYNNPNDEESSAR
Ga0210402_1032618223300021478SoilMNFPVIIIRLLTIAFFALISYGLIGSIAVRSTTGVILAIISLGATVMFLYLLPKLYQQPNEEERSNG
Ga0247786_106068323300022883SoilMKLPSFIINLIVVVFFALISYGLTASIAVKSTMGIILALVSLGATITFLCLLPKLKQQPG
Ga0247745_109165723300022898SoilMKLPSFIINLIVVVFFALISYGLTASIAVKSTMGIILALVSLGATITFLCLLPKLKQQPGEEEGTEG
Ga0207688_1071638923300025901Corn, Switchgrass And Miscanthus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG
Ga0207680_1048889823300025903Switchgrass RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEDRTDA
Ga0207647_1079118113300025904Corn RhizosphereITLPQSKHSLMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQSAEEDKTEG
Ga0207685_1045716313300025905Corn, Switchgrass And Miscanthus RhizosphereINLVVIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFLCLLSKLHEKPAEEE
Ga0207701_1002075433300025930Corn, Switchgrass And Miscanthus RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAAKSTMGIVLALVSLGATVIFLYLLPKLKEQPREEE
Ga0207670_1002139333300025936Switchgrass RhizosphereMKFSSLVINLIVIVFFALISYGLTGSIAVKSTIGIVLALVSLGATATFLYLLPKLKEQPREEDRTDA
Ga0207704_1103309913300025938Miscanthus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLVATITFVCLLPKLYRQPAEEDKTEG
Ga0207691_1040940723300025940Miscanthus RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLGATITFVCLLPKLYRQPAEEDKTEG
Ga0207640_1040245323300025981Corn RhizosphereMKLPSFIINLLIIIFFALISYGLTGSIAVKSTMGIILSLVSLVATITFV
Ga0207640_1044309033300025981Corn RhizosphereKLPSFIINLIVVVFFALISYGLTASIAVKSTMGIILALVSLGATITFLCLLPKLKQQPGEEEGTEG
Ga0310813_1020362333300031716SoilMKLPSIITNLLAIIFFGLISYGLTGSIAVKSTMGIILALIGLGAGIVFLYLLPKLYQQSGEEERADG
Ga0307468_10090002123300031740Hardwood Forest SoilMKLSSFIINLLVIAFFALISYGLTGSIAVRSTMGIVLALVSLGATIMFLYLLPKLKQQPGEEERTDG
Ga0310901_1057598413300031940SoilLIIFFALISYGLTGSIAVKSTMGIILSLISLGATITFAYLLPKLYQQPADEERREGEF
Ga0335084_1026397233300033004SoilMNLSLFISRFLVIVVFALISYSLTGSIVVKSTMGIILAIVSLGATAVFLYLLPKLYQHPNEEERAQR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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