Metagenome Family F090528

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090528
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	104 residues
Representative Sequence	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTW
Number of Associated Samples	98
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.37 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.074 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.28% β-sheet: 0.00% Coil/Unstructured: 42.72%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08281	Sigma70_r4_2	93.52
PF03706	LPG_synthase_TM	2.78
PF06739	SBBP	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	2.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.04 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.04 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	83.33 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	80.56 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.56 %
Unclassified	root	N/A	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11616784	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300004114\|Ga0062593_101713920	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300004157\|Ga0062590_101963316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300004463\|Ga0063356_104036004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300004479\|Ga0062595_100483735	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300004643\|Ga0062591_100863139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300004643\|Ga0062591_101615485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005093\|Ga0062594_101551608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300005093\|Ga0062594_101819371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300005328\|Ga0070676_10131733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1582	Open in IMG/M
3300005329\|Ga0070683_100203258	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300005333\|Ga0070677_10122601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300005334\|Ga0068869_100196321	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300005340\|Ga0070689_100076759	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300005343\|Ga0070687_100438554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300005347\|Ga0070668_100106375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2229	Open in IMG/M
3300005353\|Ga0070669_101359223	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005356\|Ga0070674_100540880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300005356\|Ga0070674_100695219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300005440\|Ga0070705_100168756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1471	Open in IMG/M
3300005440\|Ga0070705_100908465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300005444\|Ga0070694_101010748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300005445\|Ga0070708_101429683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300005526\|Ga0073909_10250714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300005535\|Ga0070684_100253152	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300005544\|Ga0070686_101834420	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005549\|Ga0070704_100829615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300005563\|Ga0068855_101721844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300005564\|Ga0070664_100400079	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005578\|Ga0068854_100187662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1618	Open in IMG/M
3300005578\|Ga0068854_100621426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300005614\|Ga0068856_100807473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300005844\|Ga0068862_101440417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300006237\|Ga0097621_101323933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300006852\|Ga0075433_11433109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300006880\|Ga0075429_101200043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300006881\|Ga0068865_100306528	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300009092\|Ga0105250_10491914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300009098\|Ga0105245_12065012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300009100\|Ga0075418_12227079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300009162\|Ga0075423_11362063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300009174\|Ga0105241_10532725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1052	Open in IMG/M
3300009176\|Ga0105242_11028090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300009176\|Ga0105242_11921297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009553\|Ga0105249_12852415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010042\|Ga0126314_10537364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300010045\|Ga0126311_10914311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300010375\|Ga0105239_10257775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1960	Open in IMG/M
3300010397\|Ga0134124_11075812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300010399\|Ga0134127_11961972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300012511\|Ga0157332_1068547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300012897\|Ga0157285_10005238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2358	Open in IMG/M
3300012905\|Ga0157296_10004720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2017	Open in IMG/M
3300012908\|Ga0157286_10336191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012909\|Ga0157290_10095094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300012910\|Ga0157308_10214213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012911\|Ga0157301_10288005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300012914\|Ga0157297_10182462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300012914\|Ga0157297_10370772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300012915\|Ga0157302_10174764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300013100\|Ga0157373_11472797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300013102\|Ga0157371_10127999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1806	Open in IMG/M
3300014325\|Ga0163163_10325680	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300014745\|Ga0157377_11706857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300014968\|Ga0157379_12203819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300015077\|Ga0173483_10227841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300015200\|Ga0173480_10959966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300015374\|Ga0132255_105712592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300017654\|Ga0134069_1383795	Not Available	507	Open in IMG/M
3300019361\|Ga0173482_10471144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300021445\|Ga0182009_10661025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300022883\|Ga0247786_1068481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300025899\|Ga0207642_10183342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1142	Open in IMG/M
3300025909\|Ga0207705_10596983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300025927\|Ga0207687_10558416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300025930\|Ga0207701_10992831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300025932\|Ga0207690_10653461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300025937\|Ga0207669_10453065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300025942\|Ga0207689_10124896	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300025945\|Ga0207679_10444788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300025949\|Ga0207667_11561546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300025960\|Ga0207651_11044664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300025961\|Ga0207712_11869589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300026023\|Ga0207677_11158902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300028380\|Ga0268265_10443157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300028380\|Ga0268265_11292362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300028704\|Ga0307321_1027250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300028707\|Ga0307291_1143970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300028711\|Ga0307293_10304985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300028712\|Ga0307285_10038065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300028715\|Ga0307313_10212493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300028720\|Ga0307317_10028770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1728	Open in IMG/M
3300028720\|Ga0307317_10061744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1213	Open in IMG/M
3300028721\|Ga0307315_10183557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300028754\|Ga0307297_10226094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300028778\|Ga0307288_10039683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300028791\|Ga0307290_10135651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300028793\|Ga0307299_10059802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1408	Open in IMG/M
3300028812\|Ga0247825_11393120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028876\|Ga0307286_10371182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300031547\|Ga0310887_10353188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300031562\|Ga0310886_10175605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1149	Open in IMG/M
3300032013\|Ga0310906_10236295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300032075\|Ga0310890_10773090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300032211\|Ga0310896_10121748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1199	Open in IMG/M
3300033550\|Ga0247829_10960590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300033550\|Ga0247829_11431160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300034354\|Ga0364943_0249869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.41%
Host-Associated	Host-Associated	42.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.41%
Plants	Host-Associated → Plants	42.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.89%
Roots	Host-Associated → Plants → Roots	1.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_116167841	3300000891	Soil	MKNDSTLDYLRRLNPVPQAASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQS
Ga0062593_1017139201	3300004114	Soil	MKNDSTLDYLRRLNPVPQAASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTA
Ga0062590_1019633162	3300004157	Soil	MKNDPTLAYLRRLNPVPEAASVDGAELFERITSLPRDERSAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTA
Ga0063356_1040360042	3300004463	Arabidopsis Thaliana Rhizosphere	MKNDPTLAYLRRLNPVPEAASVDGAELFERITSLPRDERSAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPTVTKQEYKTAQSELTLPPGV
Ga0062595_1004837352	3300004479	Soil	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQ
Ga0062591_1008631392	3300004643	Soil	MKNESTLAYLRRLNPVPEAPSLDAAGLFDRITSLPHDERSAPRRSTARRRVALVAVGLAVMALLATTALAISGWFGDVVKPPVTRQEYRNAQDVLTLPPGATWR
Ga0062591_1016154851	3300004643	Soil	MKNDSTLAYLRRLNPVPQAGAVDGAELFEQITSLPRDERPAPTRSGRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQS
Ga0062594_1015516082	3300005093	Soil	MKNDSTFAYLRRLNPVSEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGD
Ga0062594_1018193711	3300005093	Soil	MNDSTLAYLRRMNPVPEAASADGAELYDRITSLPQDEPLRTRRSPYRRRVALVAIGLVVMALLATTALAISGWFGDVVKPPVTRQEYRNAQEVLTLPPGATWPELNVDPNSVTSRGGGGSSA
Ga0070676_101317331	3300005328	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGV
Ga0070683_1002032583	3300005329	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPG
Ga0070677_101226011	3300005333	Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPEL
Ga0068869_1001963211	3300005334	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGATWPALNVDPNSVTSRGGGGSSAVMIAM
Ga0070689_1000767591	3300005340	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAARRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSR
Ga0070687_1004385541	3300005343	Switchgrass Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKP
Ga0070668_1001063753	3300005347	Switchgrass Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNID
Ga0070669_1013592231	3300005353	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVT
Ga0070674_1005408802	3300005356	Miscanthus Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDV
Ga0070674_1006952191	3300005356	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAV
Ga0070705_1001687561	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVDPNSVTSRGGGGSSAVM
Ga0070705_1009084651	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQGASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNA
Ga0070694_1010107481	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVD
Ga0070708_1014296832	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTW
Ga0073909_102507142	3300005526	Surface Soil	MKNDSTLAYLRRLNPVPEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGG
Ga0070684_1002531521	3300005535	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAARRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVT
Ga0070686_1018344201	3300005544	Switchgrass Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVT
Ga0070704_1008296152	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSDLALPPGVTWPELNVDPN
Ga0068855_1017218441	3300005563	Corn Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVM
Ga0070664_1004000793	3300005564	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVD
Ga0068854_1001876624	3300005578	Corn Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVDPNSVTSRGGGG
Ga0068854_1006214262	3300005578	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYLNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVM
Ga0068856_1008074732	3300005614	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTW
Ga0068862_1014404171	3300005844	Switchgrass Rhizosphere	MNDSTLAYLRRMNPVPEAASADGAELYDRITSLPQDEPLRTRRSPYRRRVALVAIGLVVMALLATTALAISGWFGDVVKPPVTRQEYRNAQDVLTLPPGATWPELNVDPNSVTSRGGGGS
Ga0097621_1013239332	3300006237	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNV
Ga0075433_114331091	3300006852	Populus Rhizosphere	MKNDSTLAYLRRLNPVPQAASGDGAELFERITSLPQERPAPRRSTARRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQS
Ga0075429_1012000432	3300006880	Populus Rhizosphere	MKNDSTLAYLRRVNPVPHAASVDGAELFERITSLPQERPAPRRSTARRRVALVAVALAATAILATTAFAVANWFGDV
Ga0068865_1003065283	3300006881	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVMIAM
Ga0105250_104919142	3300009092	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTKQEYKTAQSELTLPPGVTWPELNV
Ga0105245_120650122	3300009098	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQD
Ga0075418_122270791	3300009100	Populus Rhizosphere	MNDSTLAYLRRMNPIPEAASIDGAELYDRITSLPQDEPLGTRRAPYRRRVALVAVGLVVMALLATTALAISGWFGDVVKPPVTRQEYRNAQDVLTLPP
Ga0075423_113620632	3300009162	Populus Rhizosphere	MKNDSTLARLRRLNPVPEAASVEGGELYTRITSLPPDERLAPRRPAHRRRIALVAVALILMALLATTAFAISGLFGDVVEPPVTR
Ga0105241_105327253	3300009174	Corn Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVDPNSVTSRGGGGSSAVMV
Ga0105242_110280902	3300009176	Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVD
Ga0105242_119212972	3300009176	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAAPVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYL
Ga0105249_128524152	3300009553	Switchgrass Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQEYRNAQDMLTL
Ga0126314_105373641	3300010042	Serpentine Soil	MKNDSTLAYLRRLNPVREAAPVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDAVKPPVTRQEYRNAQDVLTLPPGATWPDLNVDPNSVTSR
Ga0126311_109143111	3300010045	Serpentine Soil	MKNDSTLAYLRRLNPVREAAPVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDAVKPPVTRQEYRNAQDVLTLPPGATWPDLNVDPNSVTSRGGGGAQAV
Ga0105239_102577751	3300010375	Corn Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVDPNSVTSRGGGGSSAVMVAMGSWECY
Ga0134124_110758122	3300010397	Terrestrial Soil	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGSSAVMVAMGSWEC
Ga0134127_119619721	3300010399	Terrestrial Soil	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQEYRNAQDMLTLPPGATWRELNLDPNS
Ga0157332_10685471	3300012511	Soil	MKNDSTLARLRRLNPVPEAASVEGGELYTRITSLPPDERLAPRRPAHRRRIALVAVALILMALLATTAFAISGLFGDVVEPPVTRQEYRNAQDVLTLPPGATWPALEVPSNSVTARGGGGSYA
Ga0157285_100052385	3300012897	Soil	MKNDSTLDYLRRLNPVPQTASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVK
Ga0157296_100047201	3300012905	Soil	MKNDSTLAYLRRLNPVPKAASVDGADLFERIISLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQE
Ga0157286_103361912	3300012908	Soil	MKNDSTLAYLRRLNPVPEAAPVDGAELFELITSLPRDERSVAHRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQ
Ga0157290_100950942	3300012909	Soil	MKNDSTLDYLRRLNPVPQAASVDGAELFEQITSLPQDERPTARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSV
Ga0157308_102142131	3300012910	Soil	MKNDSTLAYLRRLNPVPEAPFLDGADLFDRITSLPRDERSAPRRSTARRRVALVAVGLAVMALLATTALAISGWFGDVVRPPVTRQEYRNAQDVLTLPPGATWRELNLDPNSVTSRGGGGSYAVMAAMSS
Ga0157301_102880051	3300012911	Soil	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELA
Ga0157297_101824622	3300012914	Soil	MKNDSTLAYLRRLNPVPKAASVDGADLFERIISLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQS
Ga0157297_103707722	3300012914	Soil	MKNDSTLAYLRRLNPVPEAPSLDGADLFDRITSLPRDERSAPRRSTARRRVALVAVGLAVMALLATTALAISGWFGD
Ga0157302_101747642	3300012915	Soil	MKNDPTLAYLRGLNPLPQAALVAGGELFDRITSHAPDERLRARRPVYRRRIALVAVGLAVTALLATTALAISGWFGDVVKPPVTRQEYRNAQDVLTLPPGA
Ga0157373_114727972	3300013100	Corn Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVEPVVTKQEYETAQGELTLPP
Ga0157371_101279993	3300013102	Corn Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQD
Ga0163163_103256803	3300014325	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPG
Ga0157377_117068571	3300014745	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAARRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPSVTRQEYR
Ga0157379_122038191	3300014968	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQE
Ga0173483_102278412	3300015077	Soil	MKNDSTLDYLRRLNPVPQAASVDGAELFEQITSLPQDERPAARRSPNRRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSEL
Ga0173480_109599661	3300015200	Soil	MKNDSTLAYLRRLNPVPQAGSVDGAELFEQITSLPRDERPAPRRSGRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPPVTRQEYRNAQDELALP
Ga0132255_1057125922	3300015374	Arabidopsis Rhizosphere	MKNDSALAYLRRLNPVPQAASVDGAELFEQITSLPQDERAGARRSPNRRRIALVAVALAATAVLATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVD
Ga0134069_13837951	3300017654	Grasslands Soil	MKIDSTLAYLRRMNPVPEVASVDGAELFDRITSLAQDGRRPARRAQHRRRLALAAVALVVMALLATTALAVSGWFGDVVKPPVTRQEYRNAQDVLTLPPGATWPDLNVAPNSVTSRGGGGAYAVM
Ga0173482_104711442	3300019361	Soil	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTR
Ga0182009_106610251	3300021445	Soil	MKNDSTLAYLRRLNPAPEAASVDGAELFERITSLPQEAKPSARRAPYRRRFALAAVALVVMALLATTAFAISGWFGDVVKPPVTKQEYRNAQDELTLPPGATWPELNVPQNTVTS
Ga0247786_10684812	3300022883	Soil	MKNDSTLAYLRRLNPVPKAASVDGADLFERIISLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGSSAVMIAM
Ga0207642_101833421	3300025899	Miscanthus Rhizosphere	MKNDSTFAYLRRLNPVPQAASVDGAELFEQITSLPQDERAAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELRLPPGVTWPELNVDPNSVTSRGGGGSSAVMVAMGSWECYW
Ga0207705_105969832	3300025909	Corn Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALP
Ga0207687_105584162	3300025927	Miscanthus Rhizosphere	MKNDSTLARLRRLNPVPEAASVEGGELYTRITSLPPDERLAPRRPAHRRRIALVAVALILMALLATTAFAISGLFGDVVEPPVTRQEYRNAQDVLTLPPGATWPDLEVPSNSVTARGGGGSYAVMIAI
Ga0207701_109928311	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQEYRNAQDMLTLPPGEAARHRG
Ga0207690_106534611	3300025932	Corn Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGATWPALNVDPNS
Ga0207669_104530653	3300025937	Miscanthus Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQEYRNAQ
Ga0207689_101248963	3300025942	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAPRRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVMIAMSSWECYWVDA
Ga0207679_104447881	3300025945	Corn Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPSVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVMIA
Ga0207667_115615462	3300025949	Corn Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVMIAMSSWECYWVDAI
Ga0207651_110446642	3300025960	Switchgrass Rhizosphere	MKNDSTLAYLRRLNPVPQAASVDGAELFDQITSLPQDARPAARRSAARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPSVTRQEYRNAQDELALPPGVTWPALNVDPNSVTSRGGGGSSAVMIAMSSWECYW
Ga0207712_118695891	3300025961	Switchgrass Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQE
Ga0207677_111589022	3300026023	Miscanthus Rhizosphere	MKNDSTLAYLRRLNPVPRAASVDGAELFDQITSLPQDARSAPRRSGARRRVALVAVGLAVMAILATTAFAVANWFGDVVKPPVTRQEYRNAQDELALPPGATWPALNVDPN
Ga0268265_104431571	3300028380	Switchgrass Rhizosphere	MKNDSTLAYLRRMNPVPEAASSVDGAELLDRITSLPHDEPLRARRSPHRRRVALVAVGLVVMALLATTALAISGWFGDVVEPPVTKQEYRNAQDMLTLPPGATWRELNLDPNSVT
Ga0268265_112923621	3300028380	Switchgrass Rhizosphere	MNDSTLAYLRRMNPVPEAASADGAELYDRITSLPQDEPLRTRRSPYRRRVALVAIGLVVMALLATTALAISGWFGDVVKPPVTRQEYRNAQEVLTLP
Ga0307321_10272501	3300028704	Soil	MKNDSTLAYLRRLNPVSEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGSSAVMIAMGSWECY
Ga0307291_11439701	3300028707	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFG
Ga0307293_103049852	3300028711	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDVVKPPVTRQEYRNAQD
Ga0307285_100380653	3300028712	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDVVKPPVTRQEYRNAQDVLALPPGAVWPDLNVDPNS
Ga0307313_102124931	3300028715	Soil	MKNDSTLAYLRRMNPLPQPAPVDGADLYDRITALPPDERLTARRSGHRRRIALAAVALAAMALLATTAFALSGWFGDVV
Ga0307317_100287704	3300028720	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDVVKPPVTRQE
Ga0307317_100617445	3300028720	Soil	MKNDSTLAYLRRMNPLPQPAPVDGADLYDRITALPPDERLTARRSGHRRRIALAAVALAAMALLATTAFALSGWFGDVVKPAVTKQEYKAAQGELTLPPGTTWPSL
Ga0307315_101835572	3300028721	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDVVKPPVTRQEYRNAQDV
Ga0307297_102260942	3300028754	Soil	MKNDSTLAYLRRLNPVPDAASVDGAELFERITSRPRDERPARRRSAMRRRVALVAVALAATAILATTAFAVANWFGDVVKPPVTKQEYKTAQSELTLPPGVTWPELNVD
Ga0307288_100396837	3300028778	Soil	MKNDSTLAYLRRLNPVSEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGV
Ga0307290_101356512	3300028791	Soil	MNDSTLSYLRRLNPVPEAPSVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTALAISGWFGDVVKPP
Ga0307299_100598021	3300028793	Soil	MKNDSTLAYLRRLNPVSEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPPVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGSSA
Ga0247825_113931201	3300028812	Soil	MKNDSTLAYLRRLNPVPQAASVDGAELFERITSLPQERPAPRRSTARRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLP
Ga0307286_103711822	3300028876	Soil	MKNDSTLAYLRRLNPVPKAASVDGADLFERITSLPRDARPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSR
Ga0310887_103531881	3300031547	Soil	MKNDSTLAYLRRLNPVPQAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPPVTKQE
Ga0310886_101756053	3300031562	Soil	MKNDSTLAYLRRLNPVPEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPPVTKQEYKTAQSELTLPPGVTWPELNVDPN
Ga0310906_102362953	3300032013	Soil	MKTDSTLAYLRRLNPVPQAASVDGAELFEQITSLPQDERSAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGSSAVMIAMGSWECYWADA
Ga0310890_107730901	3300032075	Soil	MKTDSTLAYLRRLNPVPQAASVDGAELFEQITSLPQDERSAARRSPNRRRIALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTA
Ga0310896_101217483	3300032211	Soil	MKNDSTLAYLRRLNPVPEAASVDGAELFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVV
Ga0247829_109605902	3300033550	Soil	MKNDSTLAYLRRVNPVPHAASVDGAELFERITSLPQERPAPRRSTARRRVALVAVALAATAILATTAFAVANWFGDVVKPAVTKQEYKTAQSELTLPPGVTWPELNVDPNSVTSRGGGGS
Ga0247829_114311602	3300033550	Soil	MKNDSTLAYLRRLNPVPEAASVDGAKLFERITSLPRDERPAPRRSATRRRVALVAVGLAVMALLATTAFAVANWFG
Ga0364943_0249869_3_323	3300034354	Sediment	MKNDSTLAYLRRLNPVPEAASVDGAELFERITSLPRDERPALRRSATRRRVALVAVGLAVMALLATTAFAVANWFGDVVKPPVTKQEYKTAQSELTLPPGVTWPELN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences