Metagenome / Metatranscriptome Family F090464

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090464
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	44 residues
Representative Sequence	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIAN
Number of Associated Samples	58
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (60.185 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (86.111 % of family members)
Environment Ontology (ENVO)	Unclassified (86.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.19% Coil/Unstructured: 73.81%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00155	Aminotran_1_2	28.70
PF04304	DUF454	19.44
PF14279	HNH_5	5.56
PF02622	DUF179	2.78
PF13640	2OG-FeII_Oxy_3	2.78
PF13759	2OG-FeII_Oxy_5	2.78
PF13186	SPASM	1.85
PF08007	JmjC_2	0.93
PF14743	DNA_ligase_OB_2	0.93
PF13455	MUG113	0.93
PF02195	ParBc	0.93
PF01844	HNH	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2832	Uncharacterized membrane protein YbaN, DUF454 family	Function unknown [S]	19.44
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	2.78
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
All Organisms	root	All Organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Viruses	superkingdom	All Organisms → Viruses	6.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.70 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	4.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	4.63 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	2.78 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	4.63 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	2.78 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	4.63 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	2.78 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	4.63 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	2.78 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	4.63 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	2.78 %
Crocinitomicaceae bacterium TMED45	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006025\|Ga0075474_10002213	All Organisms → cellular organisms → Bacteria	8198	Open in IMG/M
3300006357\|Ga0075502_1019479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	667	Open in IMG/M
3300006810\|Ga0070754_10077088	All Organisms → Viruses → Predicted Viral	1689	Open in IMG/M
3300006867\|Ga0075476_10033707	All Organisms → Viruses → Predicted Viral	2137	Open in IMG/M
3300007345\|Ga0070752_1292069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	623	Open in IMG/M
3300016747\|Ga0182078_10496314	Not Available	571	Open in IMG/M
3300016754\|Ga0182072_1350961	Not Available	513	Open in IMG/M
3300016787\|Ga0182080_1749792	Not Available	1619	Open in IMG/M
3300017818\|Ga0181565_10086693	Not Available	2228	Open in IMG/M
3300017818\|Ga0181565_10134415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300017818\|Ga0181565_10303472	Not Available	1071	Open in IMG/M
3300017818\|Ga0181565_10311610	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300017949\|Ga0181584_10143329	Not Available	1606	Open in IMG/M
3300017951\|Ga0181577_10017927	All Organisms → cellular organisms → Bacteria	5206	Open in IMG/M
3300017951\|Ga0181577_10242172	Not Available	1189	Open in IMG/M
3300017952\|Ga0181583_10012534	Not Available	6174	Open in IMG/M
3300017952\|Ga0181583_10017443	All Organisms → cellular organisms → Bacteria	5226	Open in IMG/M
3300017952\|Ga0181583_10110846	Not Available	1868	Open in IMG/M
3300017952\|Ga0181583_10168095	Not Available	1456	Open in IMG/M
3300017952\|Ga0181583_10225757	Not Available	1218	Open in IMG/M
3300017952\|Ga0181583_10362489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	909	Open in IMG/M
3300017952\|Ga0181583_10608527	Not Available	657	Open in IMG/M
3300017952\|Ga0181583_10807063	Not Available	551	Open in IMG/M
3300017956\|Ga0181580_10002634	Not Available	14581	Open in IMG/M
3300017956\|Ga0181580_10133900	Not Available	1788	Open in IMG/M
3300017956\|Ga0181580_10158419	All Organisms → Viruses → Predicted Viral	1616	Open in IMG/M
3300017956\|Ga0181580_10250654	Not Available	1222	Open in IMG/M
3300017957\|Ga0181571_10403889	Not Available	846	Open in IMG/M
3300017957\|Ga0181571_10688941	Not Available	611	Open in IMG/M
3300017957\|Ga0181571_10847240	Not Available	540	Open in IMG/M
3300017958\|Ga0181582_10135119	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300017958\|Ga0181582_10371721	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	917	Open in IMG/M
3300017958\|Ga0181582_10662853	Not Available	632	Open in IMG/M
3300017962\|Ga0181581_10014969	Not Available	5826	Open in IMG/M
3300017962\|Ga0181581_10127765	Not Available	1729	Open in IMG/M
3300017962\|Ga0181581_10281779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1073	Open in IMG/M
3300017964\|Ga0181589_10112559	Not Available	1960	Open in IMG/M
3300017967\|Ga0181590_10043660	All Organisms → cellular organisms → Bacteria → Proteobacteria	3592	Open in IMG/M
3300017967\|Ga0181590_10164741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1687	Open in IMG/M
3300017967\|Ga0181590_10335729	Not Available	1089	Open in IMG/M
3300017967\|Ga0181590_11141520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	500	Open in IMG/M
3300017968\|Ga0181587_10970140	Not Available	523	Open in IMG/M
3300017969\|Ga0181585_10264212	Not Available	1209	Open in IMG/M
3300017985\|Ga0181576_10285047	Not Available	1055	Open in IMG/M
3300017986\|Ga0181569_10864661	Not Available	589	Open in IMG/M
3300018048\|Ga0181606_10262760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	970	Open in IMG/M
3300018048\|Ga0181606_10586095	Not Available	574	Open in IMG/M
3300018049\|Ga0181572_10048599	All Organisms → cellular organisms → Bacteria → Proteobacteria	2812	Open in IMG/M
3300018418\|Ga0181567_10042110	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3211	Open in IMG/M
3300018418\|Ga0181567_10433581	Not Available	867	Open in IMG/M
3300018421\|Ga0181592_10107036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2169	Open in IMG/M
3300018421\|Ga0181592_10131953	Not Available	1917	Open in IMG/M
3300018421\|Ga0181592_10157649	All Organisms → Viruses → Predicted Viral	1726	Open in IMG/M
3300018421\|Ga0181592_10200521	Not Available	1492	Open in IMG/M
3300018421\|Ga0181592_10334159	Not Available	1087	Open in IMG/M
3300018421\|Ga0181592_10391295	Not Available	984	Open in IMG/M
3300018421\|Ga0181592_10531096	Not Available	808	Open in IMG/M
3300018423\|Ga0181593_10705546	Not Available	715	Open in IMG/M
3300018424\|Ga0181591_10070417	All Organisms → cellular organisms → Bacteria → Proteobacteria	2907	Open in IMG/M
3300018424\|Ga0181591_10156663	Not Available	1820	Open in IMG/M
3300018424\|Ga0181591_10272485	Not Available	1300	Open in IMG/M
3300018424\|Ga0181591_10390129	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300018424\|Ga0181591_10471571	Not Available	921	Open in IMG/M
3300018426\|Ga0181566_10008560	All Organisms → cellular organisms → Bacteria	8216	Open in IMG/M
3300018426\|Ga0181566_10551622	Not Available	805	Open in IMG/M
3300018428\|Ga0181568_10062396	Not Available	3152	Open in IMG/M
3300018428\|Ga0181568_10442073	Not Available	1042	Open in IMG/M
3300019272\|Ga0182059_1298464	Not Available	668	Open in IMG/M
3300020053\|Ga0181595_10092399	Not Available	1500	Open in IMG/M
3300020055\|Ga0181575_10081282	All Organisms → cellular organisms → Bacteria → Proteobacteria	2017	Open in IMG/M
3300020189\|Ga0181578_10309933	Not Available	724	Open in IMG/M
3300020207\|Ga0181570_10006392	Not Available	8247	Open in IMG/M
3300021356\|Ga0213858_10045181	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300021356\|Ga0213858_10401134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	644	Open in IMG/M
3300021364\|Ga0213859_10035845	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300021368\|Ga0213860_10037483	Not Available	2051	Open in IMG/M
3300021368\|Ga0213860_10124943	Not Available	1130	Open in IMG/M
3300021425\|Ga0213866_10134479	Not Available	1322	Open in IMG/M
3300022071\|Ga0212028_1108680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300022934\|Ga0255781_10151201	Not Available	1196	Open in IMG/M
3300022934\|Ga0255781_10181798	Not Available	1051	Open in IMG/M
3300022935\|Ga0255780_10053236	Not Available	2618	Open in IMG/M
3300022935\|Ga0255780_10105173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300022935\|Ga0255780_10124869	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300022935\|Ga0255780_10295263	Not Available	772	Open in IMG/M
3300022935\|Ga0255780_10323162	Not Available	720	Open in IMG/M
3300022937\|Ga0255770_10019003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4968	Open in IMG/M
3300022939\|Ga0255754_10063034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2111	Open in IMG/M
3300022939\|Ga0255754_10249135	Not Available	865	Open in IMG/M
3300023081\|Ga0255764_10309416	Not Available	720	Open in IMG/M
3300023084\|Ga0255778_10043410	All Organisms → cellular organisms → Bacteria → Proteobacteria	2895	Open in IMG/M
3300023084\|Ga0255778_10189371	Not Available	1037	Open in IMG/M
3300023084\|Ga0255778_10209033	Not Available	965	Open in IMG/M
3300023087\|Ga0255774_10005364	Not Available	8978	Open in IMG/M
3300023087\|Ga0255774_10137769	Not Available	1343	Open in IMG/M
3300023105\|Ga0255782_10019882	All Organisms → cellular organisms → Bacteria → Proteobacteria	4031	Open in IMG/M
3300023115\|Ga0255760_10008968	Not Available	8144	Open in IMG/M
3300023116\|Ga0255751_10157946	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300023117\|Ga0255757_10191756	Not Available	1092	Open in IMG/M
3300023117\|Ga0255757_10296499	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	791	Open in IMG/M
3300023170\|Ga0255761_10562381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	524	Open in IMG/M
3300023172\|Ga0255766_10017341	Not Available	5293	Open in IMG/M
3300023172\|Ga0255766_10250472	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	931	Open in IMG/M
3300023176\|Ga0255772_10536345	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	554	Open in IMG/M
3300023180\|Ga0255768_10018826	Not Available	5833	Open in IMG/M
3300025810\|Ga0208543_1062077	Not Available	911	Open in IMG/M
3300025815\|Ga0208785_1002922	All Organisms → cellular organisms → Bacteria	7131	Open in IMG/M
3300034374\|Ga0348335_003868	All Organisms → cellular organisms → Bacteria	9789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	86.11%
Coastal	Environmental → Aquatic → Marine → Coastal	13.89%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	86.11%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.89%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	86.11%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.33%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.56%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016754	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016787	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019272	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075474_100022131	3300006025	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLSAGTVVLI
Ga0075502_10194793	3300006357	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAG
Ga0070754_100770885	3300006810	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLI
Ga0075476_100337071	3300006867	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANG
Ga0070752_12920692	3300007345	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIA
Ga0182078_104963142	3300016747	Salt Marsh	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGTTF
Ga0182072_13509612	3300016754	Salt Marsh	MAILSSTNPNRPQRGKRSVKLSGEASPQEIPLTAGTVTLIANGSGTTFTLANGQEG
Ga0182080_17497921	3300016787	Salt Marsh	MAITRNINPNRPQRGKRSVKLTGEASPQEIPLTAGTVVLIAN
Ga0181565_100866931	3300017818	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSGTT
Ga0181565_101344155	3300017818	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAG
Ga0181565_103034724	3300017818	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVL
Ga0181565_103116101	3300017818	Salt Marsh	MAILSSTNPNRPQRGKRSVRVSGEASPQEIPLTAGTVVLIANGSGTTFTLANGQEGQMMT
Ga0181584_101433295	3300017949	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLSAGT
Ga0181577_1001792711	3300017951	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLSAG
Ga0181577_102421721	3300017951	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLI
Ga0181583_100125341	3300017952	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGTTFTLAN
Ga0181583_1001744311	3300017952	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLTAGTVTLIAN
Ga0181583_101108464	3300017952	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGS
Ga0181583_101680953	3300017952	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTL
Ga0181583_102257574	3300017952	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTV
Ga0181583_103624891	3300017952	Salt Marsh	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANG
Ga0181583_106085273	3300017952	Salt Marsh	MAIVRNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIA
Ga0181583_108070632	3300017952	Salt Marsh	MAILSSTNPNRPQRGKRSVRVSGEASPQEIPLTAGTVVLIANGSGTTFTLANGQEGQM
Ga0181580_100026341	3300017956	Salt Marsh	MAILSSTNPNRPQRGKRSVKLSGEASPQEIPLTAGTVTLIANGSGTTFTLANGQEGQ
Ga0181580_101339004	3300017956	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLIANGAGTTFTLANGQE
Ga0181580_101584191	3300017956	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAG
Ga0181580_102506541	3300017956	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVT
Ga0181571_104038893	3300017957	Salt Marsh	MAILSSINPNRPQRGKRSVKLRGETSPQEIPLYAGTVMLIANGSGT
Ga0181571_106889413	3300017957	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAG
Ga0181571_108472401	3300017957	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAGT
Ga0181582_101351191	3300017958	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLI
Ga0181582_103717212	3300017958	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAG
Ga0181582_106628531	3300017958	Salt Marsh	MAILSSTNPNRPQRGKRSVKLRGETSPQEIPLYAGTVMLIANGSGTTFTLANG
Ga0181581_1001496913	3300017962	Salt Marsh	MAISSNINPNRPQRGKRTVKLTGEASPQEIPLYAGTVTLIANGAG
Ga0181581_101277651	3300017962	Salt Marsh	MAISSNISPNRPQRGKRSVKLTGEASPQEIPLYAG
Ga0181581_102817793	3300017962	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIAN
Ga0181589_101125591	3300017964	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANG
Ga0181590_100436601	3300017967	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGT
Ga0181590_101647411	3300017967	Salt Marsh	MAISSSINPNRPQRGKRSVKLTGEASPQEIPLYAGTV
Ga0181590_103357293	3300017967	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSGTTFTLANGEEGQ
Ga0181590_111415201	3300017967	Salt Marsh	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGSGTTF
Ga0181587_109701402	3300017968	Salt Marsh	MANVRNINPNRPQRGKRSVKRTGEASPQEIPLSAGTVTLIANGSGTT
Ga0181585_102642121	3300017969	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLIANGAGTTFTLAN
Ga0181576_102850474	3300017985	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGS
Ga0181569_108646611	3300017986	Salt Marsh	MAILSNINPNRPQRGKRSVKLSGEASPQEIPLSAGTVMLIANGSGT
Ga0181606_102627604	3300018048	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVMLIANGSGTTFTLANGEEG
Ga0181606_105860951	3300018048	Salt Marsh	MAILSSINPKTPTRGKRSVRVSGETSPQEIPLSAGTVVLIANGSGTTFT
Ga0181572_100485996	3300018049	Salt Marsh	MAILSSINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGT
Ga0181567_100421104	3300018418	Salt Marsh	MAIVRNINPNRPQRGKRSIKLTGEASPQEIPLTAGTVTLIANGSG
Ga0181567_104335811	3300018418	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGSGTTF
Ga0181592_101070361	3300018421	Salt Marsh	MAILSSINPNRPQRGKRSMRLSGEASPQEIPLSAGTV
Ga0181592_101319531	3300018421	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLIANGAGTTFTLANGQEGQMMTFGAS
Ga0181592_101576491	3300018421	Salt Marsh	MAILSNVNPNRPQRGKRSVRLSGEASPQEIPLYACTVVLIANGA
Ga0181592_102005211	3300018421	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSGTTFTLA
Ga0181592_103341593	3300018421	Salt Marsh	MAIVRNINPNRPQRGKRSIKLTGEASPQEIPLTAGTVTLIANGSGTTFTLA
Ga0181592_103912953	3300018421	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLTAGTVT
Ga0181592_105310961	3300018421	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLI
Ga0181593_107055463	3300018423	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLIAGTVT
Ga0181591_100704171	3300018424	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVV
Ga0181591_101566634	3300018424	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLIANGAGTTFTLANGQEGQMMTFVASS
Ga0181591_102724854	3300018424	Salt Marsh	MAILSSINPNRPQRGKRSVKLSGEASPQEIPLSAGTVMLIANASGT
Ga0181591_103901292	3300018424	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVL
Ga0181591_104715711	3300018424	Salt Marsh	MAIFSNTNPNRTERGKRSGRLSGEASPPEIPLYAGTV
Ga0181566_1000856016	3300018426	Salt Marsh	MAITSNINPKRPQRGKRSVKLTGEASPQEIPLTAGTV
Ga0181566_105516223	3300018426	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLSAGTVTL
Ga0181568_100623965	3300018428	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQGIPLYAGTVVLIANGSGTAFTLANGEE
Ga0181568_104420734	3300018428	Salt Marsh	MAILSSINPKTPTRGKRSVRVSGEASPQEIPLYAGTVVLIA
Ga0182059_12984643	3300019272	Salt Marsh	MAIVRNTNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIAN
Ga0181595_100923993	3300020053	Salt Marsh	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLSAGTVVLIANGSGT
Ga0181575_100812825	3300020055	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSG
Ga0181578_103099333	3300020189	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLTAG
Ga0181570_100063921	3300020207	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSGTTF
Ga0213858_100451814	3300021356	Seawater	MAILSSINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVL
Ga0213858_104011341	3300021356	Seawater	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGAGTTFTL
Ga0213859_100358451	3300021364	Seawater	MAILSSINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIAKA
Ga0213860_100374834	3300021368	Seawater	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGAGTTFT
Ga0213860_101249432	3300021368	Seawater	MAILSSINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIAKAAGTTF
Ga0213866_101344793	3300021425	Seawater	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVV
Ga0212028_11086801	3300022071	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLSAGTVVLIANGSGTTFTLANGQEGQMM
Ga0255781_101512015	3300022934	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIA
Ga0255781_101817981	3300022934	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGA
Ga0255780_100532361	3300022935	Salt Marsh	MAISSSINPNRPQRGKRSVKLTGEASPQEIPLYAGTVT
Ga0255780_101051735	3300022935	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTL
Ga0255780_101248694	3300022935	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTV
Ga0255780_102952631	3300022935	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLSAGTVT
Ga0255780_103231623	3300022935	Salt Marsh	MAIVSNINPNRPQRGKRSVKLTGEASPQEIPLSAGTVT
Ga0255770_100190039	3300022937	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVT
Ga0255754_100630341	3300022939	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIA
Ga0255754_102491353	3300022939	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTV
Ga0255764_103094161	3300023081	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLIAGTVTL
Ga0255778_100434101	3300023084	Salt Marsh	MAIVRNINPNRPQRGKRSVKLTGEASPQEIPLTAGTVTLIANGSGTT
Ga0255778_101893714	3300023084	Salt Marsh	MAVLSNINPNRPQRGKRSVRLSGEASPQEIPLTAG
Ga0255778_102090333	3300023084	Salt Marsh	MAISSNINPNRPQRGKRSVKLTGEASPQEIPLYAGTVTLIANGAGTTFTLANGQEG
Ga0255774_1000536425	3300023087	Salt Marsh	MAILSSINPNRPQRGKRSVKLSGEASPQEIPLSAGTVMLIANGSGTTF
Ga0255774_101377693	3300023087	Salt Marsh	MAILSSTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGS
Ga0255782_100198828	3300023105	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGAGTTFTLANGQ
Ga0255760_1000896816	3300023115	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLTAGTVTLIANGS
Ga0255751_101579462	3300023116	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLI
Ga0255757_101917561	3300023117	Salt Marsh	MAVLSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGTTFTLAN
Ga0255757_102964991	3300023117	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLTAGTVTLIANGSGTT
Ga0255761_105623812	3300023170	Salt Marsh	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIAN
Ga0255766_1001734110	3300023172	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIANGSGTTFTLANGE
Ga0255766_102504721	3300023172	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANAAGT
Ga0255772_105363451	3300023176	Salt Marsh	MAIVRNVNPNRPQRGKRSVKLTGEASPQEIPLSAGTVTLIA
Ga0255768_1001882613	3300023180	Salt Marsh	MAILSNTNPNRPQRGKRSVRLSGEASPQEIPLYAGTVVLIANGSGTTFT
Ga0208543_10620773	3300025810	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGTTFT
Ga0208785_10029221	3300025815	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLTAGTVVLIANGSGTTFTL
Ga0348335_003868_1_123	3300034374	Aqueous	MAILSNINPNRPQRGKRSVRLSGEASPQEIPLSAGTVVLIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090464

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences