Metagenome / Metatranscriptome Family F090459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090459
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	53 residues
Representative Sequence	MGTKLFWRLYFWWGIRQARKRRIAREAELAKRPLMTNDEYWEKVHNDRTNNL
Number of Associated Samples	56
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	35.24 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	62.96 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (44.444 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (53.704 % of family members)
Environment Ontology (ENVO)	Unclassified (53.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.75% β-sheet: 0.00% Coil/Unstructured: 46.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02543	Carbam_trans_N	21.30
PF16861	Carbam_trans_C	16.67
PF09834	DUF2061	9.26
PF10902	WYL_2	7.41
PF13155	Toprim_2	1.85
PF03796	DnaB_C	1.85
PF01583	APS_kinase	1.85
PF02739	5_3_exonuc_N	1.85
PF02773	S-AdoMet_synt_C	0.93
PF07883	Cupin_2	0.93
PF13394	Fer4_14	0.93
PF01048	PNP_UDP_1	0.93
PF13207	AAA_17	0.93
PF02348	CTP_transf_3	0.93
PF13578	Methyltransf_24	0.93
PF00793	DAHP_synth_1	0.93
PF10276	zf-CHCC	0.93
PF04055	Radical_SAM	0.93
PF07728	AAA_5	0.93
PF08007	JmjC_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	21.30
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	1.85
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.85
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	1.85
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.85
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.93
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.93
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
cellular organisms	root	All Organisms → cellular organisms	38.89 %
Viruses	superkingdom	All Organisms → Viruses	16.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.89 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.15 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.85 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.85 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	1.85 %
SAR86 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	1.85 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.85 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	1.85 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.85 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	12.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1.85 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.85 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001778\|ACM18_1032715	All Organisms → cellular organisms → Bacteria → Proteobacteria	2489	Open in IMG/M
3300001822\|ACM39_105986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1216	Open in IMG/M
3300001830\|ACM40_1015163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300003621\|JGI26083J51738_10058959	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300005934\|Ga0066377_10000256	Not Available	12110	Open in IMG/M
3300006025\|Ga0075474_10000397	Not Available	16140	Open in IMG/M
3300006025\|Ga0075474_10000647	Not Available	13649	Open in IMG/M
3300006026\|Ga0075478_10000132	Not Available	25691	Open in IMG/M
3300006026\|Ga0075478_10003105	Not Available	5993	Open in IMG/M
3300006026\|Ga0075478_10007422	Not Available	3801	Open in IMG/M
3300006357\|Ga0075502_1694685	Not Available	1339	Open in IMG/M
3300006400\|Ga0075503_1656404	Not Available	1426	Open in IMG/M
3300007539\|Ga0099849_1027130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	2463	Open in IMG/M
3300007539\|Ga0099849_1043018	Not Available	1900	Open in IMG/M
3300007539\|Ga0099849_1227293	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010296\|Ga0129348_1001856	Not Available	7642	Open in IMG/M
3300010296\|Ga0129348_1001977	Not Available	7432	Open in IMG/M
3300010296\|Ga0129348_1074402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	1210	Open in IMG/M
3300010296\|Ga0129348_1120090	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	919	Open in IMG/M
3300010297\|Ga0129345_1092217	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300010300\|Ga0129351_1007368	All Organisms → cellular organisms → Bacteria → Proteobacteria	4569	Open in IMG/M
3300010300\|Ga0129351_1046838	Not Available	1772	Open in IMG/M
3300010300\|Ga0129351_1237731	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300017758\|Ga0181409_1012086	Not Available	2856	Open in IMG/M
3300017818\|Ga0181565_10009163	Not Available	7498	Open in IMG/M
3300017818\|Ga0181565_10027410	Not Available	4200	Open in IMG/M
3300017818\|Ga0181565_10055740	All Organisms → cellular organisms → Bacteria → Proteobacteria	2848	Open in IMG/M
3300017818\|Ga0181565_10114043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	1907	Open in IMG/M
3300017818\|Ga0181565_10219497	Not Available	1301	Open in IMG/M
3300017818\|Ga0181565_10219610	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300017818\|Ga0181565_10242194	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300017818\|Ga0181565_10427841	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300017818\|Ga0181565_10455651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	836	Open in IMG/M
3300017818\|Ga0181565_10860524	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300017818\|Ga0181565_10919800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	545	Open in IMG/M
3300017949\|Ga0181584_10102915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1951	Open in IMG/M
3300017949\|Ga0181584_10252792	Not Available	1141	Open in IMG/M
3300017951\|Ga0181577_10006093	Not Available	9201	Open in IMG/M
3300017951\|Ga0181577_10096847	Not Available	2047	Open in IMG/M
3300017951\|Ga0181577_10255699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300017952\|Ga0181583_10009194	Not Available	7229	Open in IMG/M
3300017952\|Ga0181583_10194680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300017952\|Ga0181583_10353845	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300017956\|Ga0181580_10007641	Not Available	8718	Open in IMG/M
3300017956\|Ga0181580_10019131	All Organisms → cellular organisms → Bacteria	5383	Open in IMG/M
3300017956\|Ga0181580_10039265	All Organisms → cellular organisms → Bacteria → Proteobacteria	3625	Open in IMG/M
3300017956\|Ga0181580_10455443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300017956\|Ga0181580_10781265	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	602	Open in IMG/M
3300017957\|Ga0181571_10016661	Not Available	5370	Open in IMG/M
3300017957\|Ga0181571_10089894	Not Available	2079	Open in IMG/M
3300017958\|Ga0181582_10438797	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300017962\|Ga0181581_10103932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1953	Open in IMG/M
3300017964\|Ga0181589_10553198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	737	Open in IMG/M
3300017968\|Ga0181587_10119724	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300017968\|Ga0181587_10843173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	570	Open in IMG/M
3300018049\|Ga0181572_10117684	Not Available	1748	Open in IMG/M
3300018049\|Ga0181572_10405776	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300018418\|Ga0181567_10794987	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	599	Open in IMG/M
3300018421\|Ga0181592_10276489	Not Available	1223	Open in IMG/M
3300018421\|Ga0181592_10461443	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300018421\|Ga0181592_10640117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	717	Open in IMG/M
3300018423\|Ga0181593_10183678	Not Available	1659	Open in IMG/M
3300019765\|Ga0194024_1000448	All Organisms → cellular organisms → Bacteria	8155	Open in IMG/M
3300019765\|Ga0194024_1111560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300020189\|Ga0181578_10024622	All Organisms → cellular organisms → Bacteria → Proteobacteria	4281	Open in IMG/M
3300020189\|Ga0181578_10195304	Not Available	1014	Open in IMG/M
3300020207\|Ga0181570_10162603	Not Available	1212	Open in IMG/M
3300021335\|Ga0213867_1002242	All Organisms → cellular organisms → Bacteria	8590	Open in IMG/M
3300021335\|Ga0213867_1024401	All Organisms → Viruses → Predicted Viral	2442	Open in IMG/M
3300021335\|Ga0213867_1043348	Not Available	1742	Open in IMG/M
3300021335\|Ga0213867_1096424	Not Available	1063	Open in IMG/M
3300021335\|Ga0213867_1191221	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	684	Open in IMG/M
3300021356\|Ga0213858_10010336	Not Available	4406	Open in IMG/M
3300021364\|Ga0213859_10002126	Not Available	8796	Open in IMG/M
3300021364\|Ga0213859_10006360	Not Available	5275	Open in IMG/M
3300021368\|Ga0213860_10492008	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300021373\|Ga0213865_10002727	Not Available	11048	Open in IMG/M
3300021373\|Ga0213865_10083202	All Organisms → Viruses → Predicted Viral	1729	Open in IMG/M
3300021425\|Ga0213866_10059958	All Organisms → Viruses → Predicted Viral	2137	Open in IMG/M
3300021425\|Ga0213866_10297031	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300021425\|Ga0213866_10359485	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	718	Open in IMG/M
3300021425\|Ga0213866_10522590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	563	Open in IMG/M
3300021959\|Ga0222716_10338856	Not Available	894	Open in IMG/M
3300022050\|Ga0196883_1049008	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300022187\|Ga0196899_1001131	Not Available	13369	Open in IMG/M
3300022925\|Ga0255773_10253870	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	750	Open in IMG/M
3300022934\|Ga0255781_10293676	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300022935\|Ga0255780_10189980	Not Available	1074	Open in IMG/M
3300022935\|Ga0255780_10415222	Not Available	593	Open in IMG/M
3300022937\|Ga0255770_10078207	Not Available	1966	Open in IMG/M
3300022937\|Ga0255770_10088581	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300023081\|Ga0255764_10215125	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	938	Open in IMG/M
3300023084\|Ga0255778_10303353	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300023087\|Ga0255774_10495473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	522	Open in IMG/M
3300023105\|Ga0255782_10282375	Not Available	784	Open in IMG/M
3300023108\|Ga0255784_10367841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	693	Open in IMG/M
3300023115\|Ga0255760_10404407	Not Available	631	Open in IMG/M
3300023119\|Ga0255762_10167338	Not Available	1247	Open in IMG/M
3300023170\|Ga0255761_10045994	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	3028	Open in IMG/M
3300025674\|Ga0208162_1020508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	2556	Open in IMG/M
3300025674\|Ga0208162_1036944	All Organisms → Viruses → Predicted Viral	1734	Open in IMG/M
3300025674\|Ga0208162_1111274	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300025695\|Ga0209653_1004232	Not Available	9322	Open in IMG/M
3300026085\|Ga0208880_1000001	Not Available	236366	Open in IMG/M
3300027917\|Ga0209536_100829933	Not Available	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.15%
Freshwater	Environmental → Aquatic → Freshwater	1.85%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	55.56%
Coastal	Environmental → Aquatic → Marine → Coastal	35.19%
Oceanic	Environmental → Aquatic → Marine → Oceanic	5.56%
River	Environmental → Aquatic → Freshwater → River	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Strait	Environmental → Aquatic → Marine → Strait	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	53.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	35.19%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.85%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	53.70%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	13.89%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	13.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.41%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	2.78%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.85%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300001822	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM39, ROCA_DNA108_2.0um_23a	Environmental	Open in IMG/M
3300001830	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM40, ROCA_DNA028_0.2um_3l	Environmental	Open in IMG/M
3300003621	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACM18_10327154	3300001778	Marine Plankton	MDTKLFWRLYFWWGIRQARKRRIAREAEMANRPTMTNDEYWEKVHNDRTNNL*
ACM39_1059863	3300001822	Marine Plankton	YFWWGIRQARKRRIAREAEMANRPTMTNDEYWEKVHNDRTNNL*
ACM40_10151632	3300001830	Marine Plankton	MDIKKRIMDTKLFWRLYFWWGIRQARKRGMANRPTMTNDEYWEKVHNDRTNNL*
JGI26083J51738_100589592	3300003621	Marine	MKKHLREYIMSTKLFWRLYFWWGIRQAGKRRKAKEAEIAKRPQMTNDEYWEKVHNDRNNNL*
Ga0066377_1000025616	3300005934	Marine	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAREAEMANRPTMTNDEYWEKVHNDRTNNL*
Ga0075474_1000039711	3300006025	Aqueous	MDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHNDRTNNL*
Ga0075474_1000064712	3300006025	Aqueous	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREAELAKRPLMTNDEYWEKVHNDRTNNL*
Ga0075478_1000013229	3300006026	Aqueous	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHNDRTNNL*
Ga0075478_100031051	3300006026	Aqueous	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREAELAKRPTMTNDEYWEKVHNDRTNNL*
Ga0075478_100074221	3300006026	Aqueous	RLYFWWGIRQARKRRIAREAELAKRPLMTNDEYWEKVHNDRTNNL*
Ga0075502_16946851	3300006357	Aqueous	MGTKLFWRLYFWWGIRQARKRRIAREAELAKRPLMTNDEYWEKVHNDRTNNL*
Ga0075503_16564044	3300006400	Aqueous	MDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHN
Ga0099849_10271302	3300007539	Aqueous	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL*
Ga0099849_10430182	3300007539	Aqueous	MGTKLFWRLYFWWGIRQARKRRLAREAEIAKRPLMTNDEYWEKVHNDRTNNL*
Ga0099849_12272932	3300007539	Aqueous	MKKWLMDTKLFWRLYFWWGIRQARKRRIAQEVEVAKRPAMDNDDYWDMVHRRKQND*
Ga0129348_10018562	3300010296	Freshwater To Marine Saline Gradient	MKKWFMGTKLFWKLYFWWGIRQAMKERKRKEAENAKREPMSNDDYWDMVHRRKQND*
Ga0129348_100197710	3300010296	Freshwater To Marine Saline Gradient	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRNNNL*
Ga0129348_10744022	3300010296	Freshwater To Marine Saline Gradient	MKKWLMDTKLFWRLYFWWGIRQARKRRIAWEAEVAKRPQMTNDEYWDMVHRRKQND*
Ga0129348_11200902	3300010296	Freshwater To Marine Saline Gradient	MGTKLFWRLYFWWGIRQARKRRIENEKRLAAMPKLSIEEYWEKVHNDRNNNI*
Ga0129345_10922172	3300010297	Freshwater To Marine Saline Gradient	MQTKLFWRLYFWWGIRQAGKRRKAKEAQMAKRPRMTNDEYWEKVHNDRNRNL*
Ga0129351_10073686	3300010300	Freshwater To Marine Saline Gradient	MDTKLFWKLYFWWGIRQARKRRIAHETEIAKRPLMTNDEYWEKVHNDRTNNL*
Ga0129351_10468385	3300010300	Freshwater To Marine Saline Gradient	MDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHNDRTNSL*
Ga0129351_12377311	3300010300	Freshwater To Marine Saline Gradient	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKV
Ga0181409_10120863	3300017758	Seawater	WKLWFWYGIRKAMKERKAKEAENAKKPRMTNDEYWEKVHNDRNNNV
Ga0181565_100091636	3300017818	Salt Marsh	MKKWLMGTKLFWRLYFWWGIRQARKRRIAYEEKQKTMPQLDTEQYWEKVHNDRTNNL
Ga0181565_100274104	3300017818	Salt Marsh	MKKLLMDTKLFWKLYFWWGIRQARKRREAWEAEVAKRPAMDNDEYWDMVHRRKQHD
Ga0181565_100557405	3300017818	Salt Marsh	MDIKKYIMSTKLFWRLYFWWGIRQARKRRLAWEAELAKRPAMDNDEYWEKVHNDRNRDL
Ga0181565_101140433	3300017818	Salt Marsh	MSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0181565_102194972	3300017818	Salt Marsh	MDIKKRIMQTKLFWRLYFWWGIRQARKRRLAREAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0181565_102196102	3300017818	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRIAQEAEVAKRPAMDNDDYWDMVHRKRQIKE
Ga0181565_102421942	3300017818	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRIAQEVEVAKRPAMDNDDYWDMVHRRKEHD
Ga0181565_104278412	3300017818	Salt Marsh	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAWEEEVAKRPAMDNDDYWDMVHRRNHND
Ga0181565_104556511	3300017818	Salt Marsh	MDIKKRIMQTKLFWRLYFWWGIRQAGKRRKAKEAQMAKRPRMTNDEYWEKVHNDRNRNL
Ga0181565_108605242	3300017818	Salt Marsh	MDIKKRIMETKLFWRLYFWWGIRQARKRRLAWEAELKTRPQLDTEQYWEKVHNDRNRNL
Ga0181565_109198001	3300017818	Salt Marsh	MDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHNDRNRD
Ga0181584_101029152	3300017949	Salt Marsh	MDIKKRIMGTKLFWRLYFWWGIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0181584_102527922	3300017949	Salt Marsh	YIMSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0181577_100060938	3300017951	Salt Marsh	MGTKLFWRLYFWWGIRQARKRRIAYEEKQKTMPQLDTEQYWEKVHNDRTNNL
Ga0181577_100968473	3300017951	Salt Marsh	MDIKKRIMDTKLFWRLYFWWSIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0181577_102508111	3300017951	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRLAWEAKQKLAPRLDTEQYWEMVHSKKQIDNE
Ga0181577_102556992	3300017951	Salt Marsh	MDTKLFWQLYFWWGIRQARKRRIAWEEEVAKRPAMDNDDYWDMVHRRNHND
Ga0181583_100091942	3300017952	Salt Marsh	MSTKLFWRLYFWWGIRQARKRRLAWEAELAKRPAMDNDEYWEKVHNDRNRDL
Ga0181583_101946802	3300017952	Salt Marsh	MKKWLMDTKLFWRLYFWWGIRQARKRRIAQEAEVAKRPAMDNDDYWDMVHRKRQIKE
Ga0181583_103538452	3300017952	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRIAWEEEVAKRPAMDNDDYWDMVHRRNHND
Ga0181580_1000764114	3300017956	Salt Marsh	MSTKLFWRLYFWWGIRQARKRRLAWEAEIAKRPAMDNDEYWEKVHNDRNRDL
Ga0181580_1001913111	3300017956	Salt Marsh	MGTKLFWRLYFWWGIRQARKRRIEREAEIAKRPAMDNDEYWEKVHNDRTNNL
Ga0181580_100392654	3300017956	Salt Marsh	MQTKLFWRLYFWWGIRQARKRRLAREAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0181580_104554433	3300017956	Salt Marsh	MSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRNRDL
Ga0181580_107812651	3300017956	Salt Marsh	MDIKKRIMDTKLFWQLYFWWGIRQARKRRIAWEEEVAKRPAMDNDDYWDMVHRRNHND
Ga0181571_1001666112	3300017957	Salt Marsh	MDIKKYIMSTKLFWRLYFWWGIRQARKRRLAWEAEIAKRPAMDNDEYWEKVHNDRNRDL
Ga0181571_100898942	3300017957	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRIAQEVEVAKRPAMDNDDYWDMVHRRKEHE
Ga0181582_104387972	3300017958	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRIAQAAEVAKRPAMDNDDYWDMVHRRKQND
Ga0181581_101039322	3300017962	Salt Marsh	MDIKKRIMGTKLFWRLYFWWSIRQARKRRLAREAELAKRPLMTNDEYWEKVQNDRTNNL
Ga0181589_105531983	3300017964	Salt Marsh	MDIKKYIMSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKV
Ga0181587_101197243	3300017968	Salt Marsh	MQTKLFWRLYFWWGIRQAGKRRKAKEAQMAKRPRMTNDEYWEKVHNDRNRNL
Ga0181587_103038391	3300017968	Salt Marsh	MDTKLFWRLYFWWGIRQARKRRLAWEAKQKLAPRLDTEQYWEMVHSKKQI
Ga0181587_108431732	3300017968	Salt Marsh	MKKWLMDTKLFWRLYFWWGIRQARKRRIAQEVEVAKRPAMDNDDYWDMVHRRKEHD
Ga0181572_101176841	3300018049	Salt Marsh	DIKKRIMQTKLFWRLYFWWGIRQAGKRRKAKEAQMAKRPRMTNDEYWEKVHNDRNRNL
Ga0181572_104057762	3300018049	Salt Marsh	MGTKLFWRLYFWWGIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0181567_107949872	3300018418	Salt Marsh	IRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0181592_102764891	3300018421	Salt Marsh	KYIMSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0181592_104614431	3300018421	Salt Marsh	MDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHNDRN
Ga0181592_106401171	3300018421	Salt Marsh	WLMDTKLFWRLYFWWGIRQARKRRIAQEAEVAKRPAMDNDDYWDMVHRKRQIKE
Ga0181593_101836782	3300018423	Salt Marsh	MKKWLMGTKLFWRLYFWWSIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0194024_10004488	3300019765	Freshwater	MGTKLFWRLYFWWGIRQARKRRIENEKRLAAMPKLSIEEYWEKVHNDRNNNI
Ga0194024_11115602	3300019765	Freshwater	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0181578_100246222	3300020189	Salt Marsh	METKLFWRLWLWWGIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0181578_101953041	3300020189	Salt Marsh	TKLFWRLYFWWGIRQARKRRLAWEAELAKRPAMDNDEYWEKVHNDRNRDL
Ga0181570_101626032	3300020207	Salt Marsh	MDIKKRIMETKLFWKLYFWWGIRQARKRRIAWEEEVAKRPAMDNDDYWDMVHRRNHND
Ga0213867_10022423	3300021335	Seawater	MKKWLMGTKLFWRLYFWWGIRQARKRRIAQAAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213867_10244012	3300021335	Seawater	MDTKLFWRLYFWWGIRQARKRRIAWEAELAKRPAMDNDDYWDMVHRRKQND
Ga0213867_10433484	3300021335	Seawater	MDTKLFWRLYFWWGIRQARKRRLAREAELKTRPQLDTEQYWEKVHNDRINNL
Ga0213867_10964241	3300021335	Seawater	MKKWIMDTKLFWKLYFWWGIRQARKRRIAQEAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213867_11912212	3300021335	Seawater	MKKWLMDTKLFWRLYFWWGIRQARKRRIAREAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213858_100103361	3300021356	Seawater	MKKWLMDTKLFWRLYFWWGIRQARKRRIAWEAEVAKRPAMDNDDYWD
Ga0213859_1000212613	3300021364	Seawater	MYRFKSRIMDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHNDRNRDL
Ga0213859_1000636010	3300021364	Seawater	MDTKLFWKLYFWWGIRQARKRRIAQEAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213860_104920082	3300021368	Seawater	MDIKKRIMETKLFWRLYFWWGIRQARKRRLAREAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0213865_100027273	3300021373	Seawater	MKKWLMDTKLFWRLYFWWGIRQARKRRIAWEAELAKRPAMDNDEYWDMVHRRKQND
Ga0213865_100832021	3300021373	Seawater	MDTKLFWRLYFWWGIRQARKRRIAWEAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213866_100599582	3300021425	Seawater	MDTKLFWRLYFWWGIRQARKRRIAWEAELAKRPAMDNDEYWDMVHRRKQND
Ga0213866_102970311	3300021425	Seawater	MDTKLFWRLYFWWGIRQARKRRIAREAEVAKRPAMDNDDYWDMVHRRKQND
Ga0213866_103594852	3300021425	Seawater	MGTKLFWRLYFWWGIRQARKRRLAQEAKKKTMPQLDTEQYWEKVHNDRNHNL
Ga0213866_105225902	3300021425	Seawater	MKKWLMDTKLFWRLYFWWGIRQARKRRIAWEAEVAKRPAMDNDDYWDMVHRRKQND
Ga0222716_103388562	3300021959	Estuarine Water	MNKLKAYVMDTKLFWRLYFWWGIRQARKRRIAWEEEMAKRPRMTNDEYWDMVNRRKQND
Ga0196883_10490081	3300022050	Aqueous	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0196899_100113112	3300022187	Aqueous	MDTKLFWRLYFWWGIRQARKRRIAHEAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0255773_102538701	3300022925	Salt Marsh	CRDEETRSVHLQMKKWLMGTKLFWRLYFWWGIRQARKRRIAYEEKQKTMPQLDTEQYWEKVHNDRTNNL
Ga0255781_102936762	3300022934	Salt Marsh	METKLFWRLYFWWGIRQARKRRLAWEAELKTRPQLDTEQYWEKVHNDRNRNL
Ga0255780_101899802	3300022935	Salt Marsh	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAQAAEVAKRPAMDNDDYWDMVHRRKQND
Ga0255780_104152221	3300022935	Salt Marsh	RIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0255770_100782071	3300022937	Salt Marsh	KRIMGTKLFWRLYFWWSIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0255770_100885813	3300022937	Salt Marsh	MDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHNDRNRDL
Ga0255764_102151254	3300023081	Salt Marsh	MDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHN
Ga0255778_103033531	3300023084	Salt Marsh	MDIKKYIMSTKLFWRIYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0255774_104954733	3300023087	Salt Marsh	MDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKV
Ga0255782_102823752	3300023105	Salt Marsh	KKRIMGTKLFWRLYFWWGIRQARKRRLAREAELAKRPLMTNDEYWEKVHNDRTNNL
Ga0255784_103678412	3300023108	Salt Marsh	FWRLYFWWGIRQARKRRLAWEAELKTRPQLDTEQYWEKVHNDRNRNL
Ga0255760_104044071	3300023115	Salt Marsh	SRIMDTKLFWRIYFWWGIRQARKRRIAWEEKQKTMPQLDTEQYWEKVHNDRNRDL
Ga0255762_101673382	3300023119	Salt Marsh	FWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRTNNL
Ga0255761_100459949	3300023170	Salt Marsh	KQTLMYRFKQYVMGTKLFWRLYFWWGIRQARKRRIEREAEIAKRPAMDNDEYWEKVHNDRTNNL
Ga0255761_105635321	3300023170	Salt Marsh	MDTKLFWRLYFWWGIHQARKRRLAWEAKQKSSPRLDTEQYWEMVHSKKQIDNE
Ga0208162_10205083	3300025674	Aqueous	MKKWLMGTKLFWRLYFWWGIRQARKRRIAREVEMAKRPTMTNDEYWEKVHNDRNNNL
Ga0208162_10369441	3300025674	Aqueous	MGTKLFWKLYFWWGIRQAMKERKRKEAENAKREPMSNDDYWDMVHRRKQND
Ga0208162_11112741	3300025674	Aqueous	MGTKLFWRLYFWWGIRQARKRRLAREAEIAKRPLMTNDEYWEKVHNDRTNNL
Ga0209653_10042328	3300025695	Marine	MKKHLREYIMSTKLFWRLYFWWGIRQAGKRRKAKEAEIAKRPQMTNDEYWEKVHNDRNNN
Ga0208880_1000001251	3300026085	Marine	MDIKKRIMDTKLFWRLYFWWGIRQARKRRIAREAEMANRPTMTNDEYWEKVHNDRTNNL
Ga0209536_1008299333	3300027917	Marine Sediment	MGTKLFWRLYFWWGIRQARKRRIAQAAEVAKRPAMDNDDYWDMVHRRKQND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences