NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090453

Metagenome / Metatranscriptome Family F090453

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090453
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 104 residues
Representative Sequence MRTLSIVAVVGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA
Number of Associated Samples 93
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 55.56 %
% of genes near scaffold ends (potentially truncated) 36.11 %
% of genes from short scaffolds (< 2000 bps) 82.41 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (52.778 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.889 % of family members)
Environment Ontology (ENVO) Unclassified
(51.852 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(61.111 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 0.00%    β-sheet: 51.92%    Coil/Unstructured: 48.08%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF13561adh_short_C2 29.63
PF02424ApbE 12.04
PF12840HTH_20 9.26
PF00149Metallophos 3.70
PF01909NTP_transf_2 3.70
PF01794Ferric_reduct 1.85
PF01784NIF3 0.93
PF13385Laminin_G_3 0.93
PF08327AHSA1 0.93
PF00924MS_channel 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1477FAD:protein FMN transferase ApbEPosttranslational modification, protein turnover, chaperones [O] 12.04
COG0327Putative GTP cyclohydrolase 1 type 2, NIF3 familyCoenzyme transport and metabolism [H] 0.93
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.93
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 0.93
COG3323PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 familyFunction unknown [S] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.78 %
All OrganismsrootAll Organisms47.22 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005093|Ga0062594_101785144Not Available647Open in IMG/M
3300005164|Ga0066815_10095429Not Available553Open in IMG/M
3300005329|Ga0070683_100553036Not Available1100Open in IMG/M
3300005330|Ga0070690_101054185Not Available643Open in IMG/M
3300005337|Ga0070682_100044558Not Available2747Open in IMG/M
3300005338|Ga0068868_100066355All Organisms → cellular organisms → Bacteria2869Open in IMG/M
3300005339|Ga0070660_100174631Not Available1737Open in IMG/M
3300005340|Ga0070689_101161289Not Available692Open in IMG/M
3300005341|Ga0070691_10414619Not Available762Open in IMG/M
3300005345|Ga0070692_10055931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2065Open in IMG/M
3300005366|Ga0070659_100092868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2421Open in IMG/M
3300005439|Ga0070711_100628839All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300005440|Ga0070705_100137139Not Available1605Open in IMG/M
3300005441|Ga0070700_100023539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei3603Open in IMG/M
3300005444|Ga0070694_101373352Not Available596Open in IMG/M
3300005518|Ga0070699_101529022Not Available612Open in IMG/M
3300005535|Ga0070684_100022734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5234Open in IMG/M
3300005539|Ga0068853_100100684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2555Open in IMG/M
3300005544|Ga0070686_100021934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3800Open in IMG/M
3300005544|Ga0070686_101422215Not Available582Open in IMG/M
3300005547|Ga0070693_100329428Not Available1039Open in IMG/M
3300005577|Ga0068857_100083377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2856Open in IMG/M
3300005614|Ga0068856_100059482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3774Open in IMG/M
3300005616|Ga0068852_100328673All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300005618|Ga0068864_100553901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1112Open in IMG/M
3300005718|Ga0068866_10222220All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300005718|Ga0068866_10509749Not Available798Open in IMG/M
3300005841|Ga0068863_100858249Not Available907Open in IMG/M
3300005887|Ga0075292_1015925All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300006358|Ga0068871_100432549Not Available1177Open in IMG/M
3300006575|Ga0074053_11544321Not Available589Open in IMG/M
3300006575|Ga0074053_11995996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300006576|Ga0074047_11913294Not Available602Open in IMG/M
3300006578|Ga0074059_12149479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M
3300006579|Ga0074054_11751708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria603Open in IMG/M
3300006604|Ga0074060_11996696Not Available576Open in IMG/M
3300006605|Ga0074057_11578931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria741Open in IMG/M
3300006606|Ga0074062_12705470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria795Open in IMG/M
3300006881|Ga0068865_101791394Not Available555Open in IMG/M
3300006903|Ga0075426_11133017Not Available593Open in IMG/M
3300009094|Ga0111539_12178277Not Available643Open in IMG/M
3300009098|Ga0105245_10102053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2656Open in IMG/M
3300009148|Ga0105243_10186305All Organisms → cellular organisms → Bacteria1809Open in IMG/M
3300009148|Ga0105243_11651735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300009174|Ga0105241_10362121Not Available1262Open in IMG/M
3300009176|Ga0105242_10156261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1993Open in IMG/M
3300009176|Ga0105242_11279385Not Available756Open in IMG/M
3300009177|Ga0105248_11966235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300009545|Ga0105237_11086652All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300009551|Ga0105238_10403567Not Available1360Open in IMG/M
3300010373|Ga0134128_10540440Not Available1298Open in IMG/M
3300010399|Ga0134127_10146343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani2139Open in IMG/M
3300010399|Ga0134127_10818353Not Available981Open in IMG/M
3300010400|Ga0134122_10444062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1158Open in IMG/M
3300011106|Ga0151489_1501603Not Available575Open in IMG/M
3300011106|Ga0151489_1648249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300011107|Ga0151490_1182240Not Available530Open in IMG/M
3300011107|Ga0151490_1709744Not Available533Open in IMG/M
3300011119|Ga0105246_11092402All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300012955|Ga0164298_11188042Not Available577Open in IMG/M
3300012957|Ga0164303_10727707Not Available672Open in IMG/M
3300012961|Ga0164302_10157417Not Available1346Open in IMG/M
3300012984|Ga0164309_11280541Not Available619Open in IMG/M
3300012985|Ga0164308_11134960Not Available702Open in IMG/M
3300012986|Ga0164304_10086769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1827Open in IMG/M
3300012989|Ga0164305_11517630Not Available595Open in IMG/M
3300013307|Ga0157372_10904687Not Available1024Open in IMG/M
3300013307|Ga0157372_11158431Not Available894Open in IMG/M
3300013308|Ga0157375_10040518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4490Open in IMG/M
3300014745|Ga0157377_10077173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1939Open in IMG/M
3300014968|Ga0157379_10911084Not Available834Open in IMG/M
3300014969|Ga0157376_10214818All Organisms → cellular organisms → Bacteria1778Open in IMG/M
3300015371|Ga0132258_10538493All Organisms → cellular organisms → Bacteria2925Open in IMG/M
3300015371|Ga0132258_10784872Not Available2401Open in IMG/M
3300015371|Ga0132258_10943232All Organisms → cellular organisms → Bacteria2180Open in IMG/M
3300015373|Ga0132257_100010322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9327Open in IMG/M
3300015374|Ga0132255_101044203Not Available1227Open in IMG/M
3300025899|Ga0207642_10197711Not Available1108Open in IMG/M
3300025919|Ga0207657_10572350Not Available882Open in IMG/M
3300025921|Ga0207652_10513270Not Available1079Open in IMG/M
3300025927|Ga0207687_10120550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1961Open in IMG/M
3300025927|Ga0207687_10588407Not Available937Open in IMG/M
3300025934|Ga0207686_10902358All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300025936|Ga0207670_10433705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1057Open in IMG/M
3300025938|Ga0207704_10186792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1503Open in IMG/M
3300025938|Ga0207704_10461077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae1016Open in IMG/M
3300025944|Ga0207661_10054995Not Available3190Open in IMG/M
3300026023|Ga0207677_10862709All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300026075|Ga0207708_10000955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria21664Open in IMG/M
3300026078|Ga0207702_10631792Not Available1052Open in IMG/M
3300026121|Ga0207683_11007232All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300026142|Ga0207698_10158169All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300028589|Ga0247818_10565402Not Available780Open in IMG/M
3300028589|Ga0247818_10565745Not Available779Open in IMG/M
3300028744|Ga0307318_10186774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium716Open in IMG/M
3300028784|Ga0307282_10337458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria728Open in IMG/M
3300028814|Ga0307302_10697029Not Available505Open in IMG/M
3300028875|Ga0307289_10153673Not Available946Open in IMG/M
3300028880|Ga0307300_10040650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1294Open in IMG/M
3300028889|Ga0247827_10206681All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300030336|Ga0247826_11305304Not Available584Open in IMG/M
3300031200|Ga0307496_10118815Not Available534Open in IMG/M
3300031226|Ga0307497_10166801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria928Open in IMG/M
3300031366|Ga0307506_10248726Not Available675Open in IMG/M
3300031938|Ga0308175_101184032Not Available849Open in IMG/M
3300033550|Ga0247829_10628654Not Available893Open in IMG/M
3300033551|Ga0247830_10881719All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300033551|Ga0247830_11072023Not Available643Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.04%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.41%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.56%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005887Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062594_10178514423300005093SoilMRHIRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0066815_1009542913300005164SoilSASDGSVVNHPNHAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPTPGNGVVSSTGFSLVVSASGKVKIICPAHPGNA*
Ga0070683_10055303613300005329Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG*
Ga0070690_10105418513300005330Switchgrass RhizosphereLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0070682_10004455823300005337Corn RhizosphereMRTLPIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0068868_10006635513300005338Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPHTDTAKKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0070660_10017463133300005339Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG*
Ga0070689_10116128913300005340Switchgrass RhizosphereIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0070691_1041461923300005341Corn, Switchgrass And Miscanthus RhizosphereGRGEQNGAPRRLSCMRHMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0070692_1005593113300005345Corn, Switchgrass And Miscanthus RhizosphereEQNGAPRRLSCMRHMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG*
Ga0070659_10009286843300005366Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCPANPGNG*
Ga0070711_10062883923300005439Corn, Switchgrass And Miscanthus RhizosphereMRHVRTLSIVAVIGTACWVSASEVAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0070705_10013713923300005440Corn, Switchgrass And Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0070700_10002353973300005441Corn, Switchgrass And Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVK
Ga0070694_10137335213300005444Corn, Switchgrass And Miscanthus RhizosphereHMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0070699_10152902223300005518Corn, Switchgrass And Miscanthus RhizosphereMRHIRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGHVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0070684_10002273473300005535Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG*
Ga0068853_10010068443300005539Corn RhizosphereTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG*
Ga0070686_10002193453300005544Switchgrass RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0070686_10142221523300005544Switchgrass RhizosphereARRHRLSGMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0070693_10032942813300005547Corn, Switchgrass And Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVRVGDKVVCVTRSAAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0068857_10008337773300005577Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGERVEVGDKILCVTRDGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCP
Ga0068856_10005948273300005614Corn RhizosphereMRTLPIVAVIGTACWVSASEGAAVPHTETAKKTIRLTPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0068852_10032867323300005616Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLTPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0068864_10055390123300005618Switchgrass RhizosphereMRTLSIVAVVGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0068866_1022222023300005718Miscanthus RhizosphereMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0068866_1050974923300005718Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCPANPGNG*
Ga0068863_10085824923300005841Switchgrass RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKV
Ga0075292_101592533300005887Rice Paddy SoilRREQNGAPRRLSGMRHMRALSIVAVIGTACWVSASEGSAVPHTAQAEKTIRLKPGHYVFHLGGRVRVGDKIVCVTRTGAPGGGGFVPKAGHGVGSSTGFSLVVLESGKVKIACPAHPGNA
Ga0068871_10043254923300006358Miscanthus RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKI
Ga0074053_1154432123300006575SoilMRHTRTLSIVAVVGMACWVSASLGSAVTNATGAVKTIRLKPGHYTFHLGGRVKVGDKVVCVTRNGKPAGGGFVPRPGHGVGSSTGFSLFVSASGKVK
Ga0074053_1199599623300006575SoilMRHIRTLAIVAVVGMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKIICPAHPGNA*
Ga0074047_1191329413300006576SoilMRHIRTLAIVTVVGMACWVSASLGSAVTHADGARKTIRLKPGHYTFHLGGRVKVGDKVVCVTRNGDPAGGGFVPKRGHGVGSSTGFSLFVSASGKVKITCPAHPGNA*
Ga0074059_1214947923300006578SoilMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKKTIRLEPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKIT
Ga0074054_1175170813300006579SoilMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPTPGNGVVSSTGFSLVVSASGKVKITCPAHPGNA*
Ga0074060_1199669613300006604SoilMRHIRTLAIVAVVGMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASAKVRIICPAHPGNA*
Ga0074057_1157893123300006605SoilMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVWVTRNGRPAGGGFVPTPGNGVASSTGFSLVVSASGKVKIICPAHPGNA*
Ga0074062_1270547023300006606SoilMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKKTIRLEPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVRIICPAHPGNA*
Ga0068865_10179139423300006881Miscanthus RhizosphereRRLSGMRHIRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0075426_1113301713300006903Populus RhizosphereACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0111539_1217827723300009094Populus RhizosphereVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGAKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0105245_1010205313300009098Miscanthus RhizosphereGTACWVSASEGAAVPHTETAKKTIRLTPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0105243_1018630543300009148Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0105243_1165173523300009148Miscanthus RhizosphereMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0105241_1036212133300009174Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0105242_1015626143300009176Miscanthus RhizosphereMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0105242_1127938523300009176Miscanthus RhizosphereMRHIRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0105248_1196623513300009177Switchgrass RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0105237_1108665223300009545Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0105238_1040356723300009551Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKVVCVTRSAAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA*
Ga0134128_1054044023300010373Terrestrial SoilMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG*
Ga0134127_1014634343300010399Terrestrial SoilRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0134127_1081835313300010399Terrestrial SoilMRTLSIVAVIGTACWVSASEGAAVPHTETAKKIIRLKPGHYVFHLGGHVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSES
Ga0134122_1044406233300010400Terrestrial SoilCWVSASEGSAVPHTDTAKKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0151489_150160313300011106SoilMRHIRTLSIVAVVGMACWVSASLGSAVTHADGARKTIRLKPGHYRFHLGGRVKVGDKIVCVTQNGGPAGGGFVPKRGHGVGSSTGFSLFVSASGKVKVTCPAHPGNA*
Ga0151489_164824923300011106SoilMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASAKVRIICPAHPGNA*
Ga0151490_118224013300011107SoilRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPTPGNGVVSSTGFSLVVSASGKVKIICPAHPGNA*
Ga0151490_170974413300011107SoilMRHTRTLSIVAVVGMACWVSASLGSAVTHADGARKTIRLKPGHYRFHLGGRVKVGDKIVCVTQNGGPAGGGFVPKRGHGVGSSTGFSLFVSASGKVKITCPAHPGNA*
Ga0105246_1109240223300011119Miscanthus RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0164298_1118804213300012955SoilMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLRPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVSKPGHGVASSTGFSLVVLEAGKVKITCPANPGNA*
Ga0164303_1072770713300012957SoilMACWVSASDGSVVNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0164302_1015741723300012961SoilMRHMRTLSIVAVIGMACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVDDQSVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG*
Ga0164309_1128054113300012984SoilVVGTACWVSASLGSGVTHASGAVKAIRLKPGRYTFHLGGRVKVGDRVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVLASGKVRITCPAHPGNA*
Ga0164308_1113496023300012985SoilMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG*
Ga0164304_1008676933300012986SoilREQNARRHRLSGMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA*
Ga0164305_1151763013300012989SoilMRHIRTLSIVAVVGTACWVSASLGSGVTHASGAVKTIRLKPGRYTFHLGGRVKVGDRVVCVTRNGRPAGGGFVPKPGNGIGSSTGFSLVVSESGKVRITCPAHP
Ga0157372_1090468733300013307Corn RhizosphereCWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVTITCPAHPGNA*
Ga0157372_1115843123300013307Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0157375_1004051873300013308Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA*
Ga0157377_1007717333300014745Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPDTDTAKKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA*
Ga0157379_1091108423300014968Switchgrass RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKI
Ga0157376_1021481833300014969Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYTLHLGGRVEVGDKILCVTRDGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCPANPGNG*
Ga0132258_1053849343300015371Arabidopsis RhizosphereMRHIRTLSIVAVVGAACWVSASLGSAVTHANGAVKTIRLKPGHYTFHLGGRVKVGDRVLCVTRKGRPAGGGFVPKPGNGVGSSTGFSLVVSESGKVKITCPAHPGNA*
Ga0132258_1078487243300015371Arabidopsis RhizosphereMRTLSVAAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG*
Ga0132258_1094323223300015371Arabidopsis RhizosphereMACWVSASDGSVVNHPNDAKQTIRLKPGHYTFHLGGRVHVGDKIVCVTRSGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVRITCPAHPGNA*
Ga0132257_100010322133300015373Arabidopsis RhizosphereMRTLSVAAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFDLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLDSGTVKITCPANPGNG*
Ga0132255_10104420323300015374Arabidopsis RhizosphereMRHIRTLSIVAVVGAACWVSASVGSGVTHANGAVKTIRLKPGHYTFHLGGRVKVGDKVVCVTRNGKPAGGGFVPKPGNGVASSTGFSLVVLASGKVKITCPAHPGNA*
Ga0207642_1019771123300025899Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA
Ga0207657_1057235013300025919Corn RhizosphereGRREQNGAPRRLSCMRHMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLTPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGN
Ga0207652_1051327023300025921Corn RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTEAAKKTIRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA
Ga0207687_1012055013300025927Miscanthus RhizosphereRRREQNGPRRRLSGMRHIRTLSIVAVIGTACWVSASEGSAVPHTDTAQKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGN
Ga0207687_1058840733300025927Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA
Ga0207686_1090235813300025934Miscanthus RhizosphereGDHLVPGRRSPREQNARRHRLSGMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKVVCVTGNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA
Ga0207670_1043370513300025936Switchgrass RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLEPGHYVFHLGGRVRVGDKIVCVTQSGAPAGGGFVPKPGHGVASSTGFSLVVLEAGKVKITCPAHPGNA
Ga0207704_1018679213300025938Miscanthus RhizosphereNGPRRRLSGMRHIRTLSIVAVIGTACWVSASEGSAVPDTDTAKKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA
Ga0207704_1046107723300025938Miscanthus RhizosphereMRHVRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLTPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG
Ga0207661_1005499533300025944Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGERVEVGDKILCVTRAGGPAGGGFVEEPGHGVGSSTGFQLTVSPAGTARITCPANPGNG
Ga0207677_1086270923300026023Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGSAVPHTDTAKKTVRLKPGHYVFHLGGRVKVGDKIVCVTRGGAPAGGGFVPKPGHGIGSSTGFTLFVSESGKVTITCPAHPGNA
Ga0207708_1000095593300026075Corn, Switchgrass And Miscanthus RhizosphereMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGERVEVGDKILCVTRDGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCPANPGNG
Ga0207702_1063179223300026078Corn RhizosphereMRTLPIVAVIGTACWVSASEGAAVPHTETAKKTIRLTPGHYVFHLGGRVRVGDKIVCVTRGGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAHPGNA
Ga0207683_1100723223300026121Miscanthus RhizosphereMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKETIRLKPGHYTFHLGGRVHVGDKVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPAHPGNA
Ga0207698_1015816923300026142Corn RhizosphereMRTLSIVAVIGTACWVSASEGAAAPHTETAKKPIRLKPGHYVFHLGERVEVGDKILCVTRDGGPAGGGFVEEPGHGVGSSTGFQLTVSPGGTVRITCPANPGNG
Ga0247818_1056540223300028589SoilMRTLSIVAVIGMACWVSASEGAAVPHAETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG
Ga0247818_1056574513300028589SoilMRHIRTLSIVAVVGAACWVSASLGSGVTHANGAVNTIRLKPGHYTFHLGGRVKVGDRVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVFASGKVKITCPAHPGNA
Ga0307318_1018677423300028744SoilMRHIRTLSIVAVVGMACWASVSDGSAVSHTSKASKTIRLTPGRYTFHLGGRVKVGDKVLCRTRNGAPAGGGFVPKPGNGVASSTGFSLVVSASGKVKITCPANPGNA
Ga0307282_1033745823300028784SoilMRHIRILVIVAAVATACWASVSDGSVVTHTNAAMKTIRLKPGHYVFHLGGRVKVGDKILCVTRDGDPAGGGFVPKRGHGVSSSTGFSLFVFASGKVTITCPADPGNA
Ga0307302_1069702913300028814SoilMRHLRTLSIVAVVGMACWVSTSLGSAVTHANSAVKTIRLKPGHYTFLLGGRVRVGDKVVCVTRSGMPAGGGFVPKPGNGVASSTGFSLVVLASGKVKVTCPAHPGNA
Ga0307289_1015367313300028875SoilMRHLRTLSIVAVVGMACWVSASLGSAVTHANSAVKTIRLKPGHYTFLLGGRVRVGDKVVCVTRSGMPAGGGFVPKPGNGVASSTGFSLVVLASGKVKVTCPAHPGNA
Ga0307300_1004065013300028880SoilMRHLRTLSIVAVVGMACWVSASLGSAVTHANSAVKTIRLKPGHYTFHLGGRVRVGDKVVCVTRSGMSAGGGFVPKPGNGVASSTGFSLVVLAS
Ga0247827_1020668133300028889SoilRGRGEQNGAPRRLSCMRHMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLRPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAQPGNA
Ga0247826_1130530423300030336SoilMRTLSVAAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAQPG
Ga0307496_1011881513300031200SoilGMACWVSTSDGSVVNQPNHAKNTIRLGPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGVVPKPGNGVASSTGFSLVVFASGKVKITCPAHPGNA
Ga0307497_1016680123300031226SoilMRHIRTLAIVAVVGMACWVSASDGSVVNHPNDAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVSASGKVRIICPAHPGNA
Ga0307506_1024872623300031366SoilEQNARRRRLSGMRHIRTLAIVAVVGMACWVSASDGSVVNHPNHAKKTIRLKPGHYTFHLGGRVHVGDKIVCVTRNGGPAGGGVVPKPGNGVASSTGFSLVVFASGKVKITCPAHPGNA
Ga0308175_10118403223300031938SoilMRTLSIVAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFDLGGRVRVGDKIVWVTRSGAPPAAASCRSPGTVSRLAGTVRITCPANPGNG
Ga0247829_1062865423300033550SoilMRTLSVAAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGTVRITCPANPGNG
Ga0247830_1088171913300033551SoilMRHMRTLSVAAVIGTACWVSASEGAAVPHTETAKKTIRLKPGHYVFHLGGRVRVGDKIVCVTRSGAPAGGGFVPKPGHGVASSTGFSLVVLESGKVKITCPAQPGNA
Ga0247830_1107202313300033551SoilMRHIRTLSIVAVVGAACWVSASLGSGVTHANGAVNTIRLKPGHYTFHLGGRVKVGDRVVCVTRNGRPAGGGFVPKPGNGVASSTGFSLVVLASGKVRITCPAHPGNA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.