Metagenome / Metatranscriptome Family F090410

Basic Information
Family ID	F090410
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	43 residues
Representative Sequence	MSKPTESWTGQYAAFNEALKYMYARQKGEEKSIYTPWPKFNDAA
Number of Associated Samples	97
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	95.37 %
% of genes from short scaffolds (< 2000 bps)	87.96 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (87.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.148 % of family members)
Environment Ontology (ENVO)	Unclassified (61.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (67.593 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.72% β-sheet: 0.00% Coil/Unstructured: 65.28%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08299	Bac_DnaA_C	15.74
PF03167	UDG	10.19
PF00149	Metallophos	0.93
PF00871	Acetate_kinase	0.93
PF01832	Glucosaminidase	0.93
PF03819	MazG	0.93
PF00271	Helicase_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	15.74
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	10.19
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	10.19
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	10.19
COG0282	Acetate kinase	Energy production and conversion [C]	0.93
COG3426	Butyrate kinase	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.37 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.89 %
Viruses	superkingdom	All Organisms → Viruses	6.48 %
Unclassified	root	N/A	4.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.93 %

Name	Rank	Taxonomy	Distribution
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	85.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.93 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	85.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.93 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.93 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	85.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.93 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	85.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
unclassified Campylobacterota	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	85.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.56 %
Unclassified	root	N/A	4.63 %
Epsilonproteobacteria bacterium JGI 0002006-B18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000973\|BBAY93_10127255	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	644	Open in IMG/M
3300001213\|JGIcombinedJ13530_108329954	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	968	Open in IMG/M
3300001344\|JGI20152J14361_10062051	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	903	Open in IMG/M
3300001934\|GOS2267_101705	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300002488\|JGI25128J35275_1088496	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	631	Open in IMG/M
3300003270\|JGI26113J46593_1028111	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	613	Open in IMG/M
3300004113\|Ga0065183_10791319	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	505	Open in IMG/M
3300006425\|Ga0075486_1826406	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	794	Open in IMG/M
3300006734\|Ga0098073_1023350	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	910	Open in IMG/M
3300006737\|Ga0098037_1213481	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	628	Open in IMG/M
3300006750\|Ga0098058_1199877	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	520	Open in IMG/M
3300006752\|Ga0098048_1133010	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	745	Open in IMG/M
3300006790\|Ga0098074_1017114	All Organisms → Viruses → Predicted Viral	2236	Open in IMG/M
3300006924\|Ga0098051_1147127	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	623	Open in IMG/M
3300006929\|Ga0098036_1041036	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1444	Open in IMG/M
3300006947\|Ga0075444_10304083	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	615	Open in IMG/M
3300007540\|Ga0099847_1103082	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	868	Open in IMG/M
3300007559\|Ga0102828_1164598	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	560	Open in IMG/M
3300007667\|Ga0102910_1017240	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1620	Open in IMG/M
3300008470\|Ga0115371_10289923	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1338	Open in IMG/M
3300009135\|Ga0118736_10183777	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	638	Open in IMG/M
3300009172\|Ga0114995_10838495	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	504	Open in IMG/M
3300009425\|Ga0114997_10574318	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	596	Open in IMG/M
3300009428\|Ga0114915_1183173	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	582	Open in IMG/M
3300009432\|Ga0115005_10665697	Not Available	835	Open in IMG/M
3300009512\|Ga0115003_10613753	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	634	Open in IMG/M
3300009593\|Ga0115011_10578767	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	902	Open in IMG/M
3300009593\|Ga0115011_11001789	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	707	Open in IMG/M
3300009786\|Ga0114999_10780885	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	707	Open in IMG/M
3300010149\|Ga0098049_1263468	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	523	Open in IMG/M
3300010153\|Ga0098059_1158774	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	889	Open in IMG/M
3300010153\|Ga0098059_1329576	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	581	Open in IMG/M
3300010392\|Ga0118731_114935307	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1401	Open in IMG/M
3300011013\|Ga0114934_10542924	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	513	Open in IMG/M
3300011268\|Ga0151620_1164362	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	679	Open in IMG/M
3300012954\|Ga0163111_10162000	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1903	Open in IMG/M
3300013101\|Ga0164313_10571893	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	937	Open in IMG/M
3300017713\|Ga0181391_1096790	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	668	Open in IMG/M
3300017742\|Ga0181399_1036223	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1322	Open in IMG/M
3300017744\|Ga0181397_1112865	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	709	Open in IMG/M
3300017744\|Ga0181397_1115299	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	700	Open in IMG/M
3300017762\|Ga0181422_1141411	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	740	Open in IMG/M
3300017763\|Ga0181410_1130679	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	713	Open in IMG/M
3300017768\|Ga0187220_1179442	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	639	Open in IMG/M
3300017769\|Ga0187221_1077160	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1038	Open in IMG/M
3300017772\|Ga0181430_1151413	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	674	Open in IMG/M
3300017782\|Ga0181380_1232270	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	614	Open in IMG/M
3300017782\|Ga0181380_1254359	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	582	Open in IMG/M
3300017952\|Ga0181583_10735769	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	584	Open in IMG/M
3300017956\|Ga0181580_10126117	All Organisms → Viruses → Predicted Viral	1853	Open in IMG/M
3300017967\|Ga0181590_10144523	All Organisms → Viruses → Predicted Viral	1825	Open in IMG/M
3300020175\|Ga0206124_10382512	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	526	Open in IMG/M
3300020182\|Ga0206129_10000164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	114890	Open in IMG/M
3300020410\|Ga0211699_10273616	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	655	Open in IMG/M
3300020430\|Ga0211622_10254350	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	752	Open in IMG/M
3300020438\|Ga0211576_10611414	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	541	Open in IMG/M
3300020452\|Ga0211545_10119982	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1231	Open in IMG/M
3300021368\|Ga0213860_10404561	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	590	Open in IMG/M
3300022057\|Ga0212025_1029076	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	926	Open in IMG/M
3300022187\|Ga0196899_1162211	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	614	Open in IMG/M
3300022308\|Ga0224504_10457219	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	532	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10005892	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3469	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10062717	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1166	Open in IMG/M
3300023116\|Ga0255751_10080439	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2096	Open in IMG/M
3300023170\|Ga0255761_10576746	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	514	Open in IMG/M
3300023172\|Ga0255766_10141289	All Organisms → Viruses → Predicted Viral	1387	Open in IMG/M
3300024229\|Ga0233402_1024198	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1325	Open in IMG/M
3300024328\|Ga0228635_1048271	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1151	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10206741	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	767	Open in IMG/M
3300024555\|Ga0255280_1043096	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	931	Open in IMG/M
3300025057\|Ga0208018_116739	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	908	Open in IMG/M
3300025097\|Ga0208010_1112906	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	550	Open in IMG/M
3300025110\|Ga0208158_1077069	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	797	Open in IMG/M
3300025647\|Ga0208160_1078958	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	885	Open in IMG/M
3300025873\|Ga0209757_10210935	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	615	Open in IMG/M
3300026203\|Ga0207985_1129348	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	583	Open in IMG/M
3300027631\|Ga0208133_1005031	All Organisms → cellular organisms → Bacteria	3956	Open in IMG/M
3300027631\|Ga0208133_1165363	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	509	Open in IMG/M
3300027736\|Ga0209190_1170035	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	925	Open in IMG/M
3300027742\|Ga0209121_10182147	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	771	Open in IMG/M
3300027780\|Ga0209502_10429906	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	533	Open in IMG/M
3300027791\|Ga0209830_10247267	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	811	Open in IMG/M
3300027791\|Ga0209830_10418823	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	566	Open in IMG/M
3300027858\|Ga0209013_10227817	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1107	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10027566	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2289	Open in IMG/M
3300027978\|Ga0209165_10164486	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	768	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10024250	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2268	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10041825	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1754	Open in IMG/M
3300028136\|Ga0228608_1039553	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1381	Open in IMG/M
3300031167\|Ga0308023_1063668	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	698	Open in IMG/M
3300031566\|Ga0307378_10157886	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2278	Open in IMG/M
3300031566\|Ga0307378_10347073	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1383	Open in IMG/M
3300031566\|Ga0307378_10859767	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	756	Open in IMG/M
3300031578\|Ga0307376_10211530	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1320	Open in IMG/M
3300031602\|Ga0307993_1104999	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	711	Open in IMG/M
3300031659\|Ga0307986_10147555	All Organisms → Viruses → Predicted Viral	1095	Open in IMG/M
3300031688\|Ga0308011_10186838	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	625	Open in IMG/M
3300031703\|Ga0308002_1065172	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	808	Open in IMG/M
3300031851\|Ga0315320_10495723	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	825	Open in IMG/M
3300032212\|Ga0316207_10030258	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3192	Open in IMG/M
3300032373\|Ga0316204_10651518	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	768	Open in IMG/M
3300033742\|Ga0314858_009827	All Organisms → Viruses → Predicted Viral	1901	Open in IMG/M
3300033742\|Ga0314858_199820	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	513	Open in IMG/M
3300034105\|Ga0335035_0694174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	523	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.37%
Terrestrial	Environmental → Terrestrial	3.70%
Algae	Host-Associated → Algae	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.81%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Soil	Environmental → Terrestrial → Soil	3.70%
Sediment	Environmental → Aquatic → Sediment	1.85%
Green Algae	Host-Associated → Algae → Green Algae	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.00%
Coastal	Environmental → Aquatic → Marine → Coastal	15.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.04%
Strait	Environmental → Aquatic → Marine → Strait	11.11%
Inlet	Environmental → Aquatic → Marine → Inlet	4.63%
Clay	Environmental → Terrestrial → Soil → Clay	3.70%
Lake	Environmental → Aquatic → Freshwater → Lake	1.85%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.85%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.85%
Oil Seeps	Environmental → Aquatic → Marine → Oil Seeps	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
River	Environmental → Aquatic → Freshwater → River	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment	0.93%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	24.07%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.04%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	11.11%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.48%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.63%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.70%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.85%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.85%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Oil Seeps → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.93%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.15%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	11.11%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.48%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.48%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.56%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.63%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.63%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.70%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.70%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	1.85%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.85%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.85%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.85%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.85%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.85%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.85%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.85%
Marine	Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.93%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.93%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.93%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.93%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	0.93%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001934	Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300003270	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020	Environmental	Open in IMG/M
3300004113	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)	Environmental	Open in IMG/M
3300006425	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental	Open in IMG/M
3300009135	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 382 cmbsf	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022308	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24	Environmental	Open in IMG/M
3300023112 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300024229	Seawater microbial communities from Monterey Bay, California, United States - 54D	Environmental	Open in IMG/M
3300024328	Seawater microbial communities from Monterey Bay, California, United States - 44D	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300024555	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025057	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026203	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84 (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027742	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027858	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027978	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)	Environmental	Open in IMG/M
3300027996 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MG	Environmental	Open in IMG/M
3300028136	Seawater microbial communities from Monterey Bay, California, United States - 9D	Environmental	Open in IMG/M
3300031167	Marine microbial communities from water near the shore, Antarctic Ocean - #418	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031602	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031688	Marine microbial communities from water near the shore, Antarctic Ocean - #177	Environmental	Open in IMG/M
3300031703	Marine microbial communities from water near the shore, Antarctic Ocean - #34	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032212	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-week pyrite	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090410

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY93_101272551	3300000973	Macroalgal Surface	MTKIKPAWDGQYQSFNEALKYMLARQSGKEKSIQTPWPKFNDAITDGLEWN
JGIcombinedJ13530_1083299543	3300001213	Wetland	MSKPEKAWNGQYASFNEALKYMQKRAAGQEKSIYTP
JGI20152J14361_100620511	3300001344	Pelagic Marine	MAKPTEGWVGQYAAFNEALKYMQGRQNGTEKSIYTPWPKFN
GOS2267_1017053	3300001934	Marine	MSRPKPAWVGQYEAFNDALKYMYARSKGDEKSIFTPWPKFN
JGI25128J35275_10884962	3300002488	Marine	MSKKAWDGQYQSFNEALRYMLDRQSGKEKSIYTPWSKFNDAVTDGL
JGI26113J46593_10281112	3300003270	Marine	MGKPTPAWVGQYTAFNDALKYMYARSTGEEKSIYTPWPKFNDAATDGLEWNT
Ga0065183_107913192	3300004113	Pelagic Marine	MGKTDKSWVGQHAAFSEALKYMNARQKGEEKSIYTPWPKFNDAATDGLE
Ga0075486_18264063	3300006425	Aqueous	MSKFQKAWAGQYNAFNEALKYMQKRQTGEEKSIYTPW
Ga0098073_10233503	3300006734	Marine	MSKPEEAWVGQYAAFNDALKYMYKRANGEEKSIYTPW
Ga0098037_12134813	3300006737	Marine	MSKKSEPSWEGQYAAFNEALKYMYKRQTGEEKSIYTPWPKFNDATTDG
Ga0098058_11998772	3300006750	Marine	MKEEWQSQHIDFNEALKYMKRRQQGIEKSIYTPWPKFND
Ga0098048_11330101	3300006752	Marine	MSKVKPAWDGQYQSFNEALKYMLARQSGKEKSIQTPWPK
Ga0098074_10171146	3300006790	Marine	MKEAWHGQYQSFNEALKYMLDRQSGKEKSIQTPWPKFNDAVTDG
Ga0098051_11471271	3300006924	Marine	MSKAWHGQHTAFQEALRYMLDRQSGKEKSIYTPWHKFNDAVTDGL
Ga0098036_10410364	3300006929	Marine	MSKIKPAWDGQYQAFNEALKYMLARQNGTEKSIQTPWPKFNDAVTDGLEWNT
Ga0075444_103040832	3300006947	Marine	MTDKKAWGGQYTAFNEALKYMLDRQSGKEKSIQTPWPKFNDAITDGLEWNTLT
Ga0070753_13615473	3300007346	Aqueous	MQIKHEWQSQHVDYNEALKYMKRRQEGTEKSIYTPWPKFNDAA
Ga0099847_11030823	3300007540	Aqueous	MSKTKESWAGQHTAFNEALKYMFRRSTGEEKSIYTPWPKFND
Ga0102828_11645983	3300007559	Estuarine	MSKPTESWIGQYAAFNEALKYMYKRQTGEEKSIYTP
Ga0102910_10172401	3300007667	Estuarine	MKKTSEAWVGQYAAFNEALKYMYRRSTGEEKSIYTPWPKFNDA
Ga0115371_102899231	3300008470	Sediment	MSKTNKSWVGQHAAFSEALKYMNARQKGEEKSIYTPWPKFN
Ga0118736_101837771	3300009135	Marine Sediment	MKKTSEAWVGQYAAFNEALKYMYARSTGEEKSIYTPWPK
Ga0114995_108384951	3300009172	Marine	MKKTSEAWVGQYAAFNEALKYMFKRSTGEEKSIYTPWPKFNDAATDGL
Ga0114997_105743181	3300009425	Marine	MSNKEWGGQYGSFNEALKYMLDRQSGKEKSIQTPWPKFNDAITDGLEWNT
Ga0114915_11831732	3300009428	Deep Ocean	MSKPTPAWVGQYTAFNDALKYMYARSTGDEKSIYTPWPKFNDAATDGLEWN
Ga0115005_106656975	3300009432	Marine	MSKPTPAWVGQYTAFNDALKYMYARSTGAEKSIYTPWPKFN
Ga0115003_106137532	3300009512	Marine	MSKPTEGWVGQYAAFNEALKYMQGRQNGTEKSIYTPWPKFNDAATDGLEWNTL
Ga0115011_105787673	3300009593	Marine	MSKVKPAWDGQYQSFNEALKYMLARQSGKEKSIQTPWPKFNDAVTDGLEW
Ga0115011_110017891	3300009593	Marine	MKAEKAWVGKHGSFNEALKYMQRRQQGIEKSIYTPWPKFNDAATDGLEWNT
Ga0114999_107808852	3300009786	Marine	MKKTSEAWVGQYAAFNEALKYMFKRSTGEEKSIYTPWP
Ga0098049_12634683	3300010149	Marine	MSKVKEEWIGQFSAFNEALKYMSKRANGEEKSIYTPWAKFNDATTDGL
Ga0098059_11587743	3300010153	Marine	MSTVKPAWDGQYQAFNDALKYMLARQSGKEKSIQTPWPKFNDAITDG
Ga0098059_13295761	3300010153	Marine	MSKVKPAWDGQYQAFNEALKYMLARQSGQEKSIQTPWPKF
Ga0118731_1149353074	3300010392	Marine	MGKTDKSWVGQHAAFSEALKYMNARQKGEEKSIYTPWPKFNDAA
Ga0114934_105429242	3300011013	Deep Subsurface	MSKAWNGQYQSFNEALKYMLDRQSGKEKSIQTPWPKFNDAVTD
Ga0151620_11643622	3300011268	Freshwater	MSKPEKAWNGQYASFNEALKYMQKRAAGQEKSIYTPWPKFNDATTDGLEWNTLTV
Ga0163111_101620001	3300012954	Surface Seawater	MKKKPSWVGQYAAFNEALKYMYARSTGEEKSIYTPWP
Ga0164313_105718933	3300013101	Marine Sediment	MSKPKPAWVGQYQAFNDALKYMYARSTGEEKSIYTP
Ga0181391_10967903	3300017713	Seawater	MSKAQKAWAGQYQAFNEALKYMNNRMHGEERSILTPWSKFND
Ga0181399_10362231	3300017742	Seawater	MSKAQKAWAGQYQAFNEALKYMNNRMHGEERSILTPWSKFNDAGTDGIE
Ga0181397_11128652	3300017744	Seawater	MKKTSEAWVGQYAAFNEALKYMFKRSTGEEKSIYTPWPKFNDAATDGIEWNT
Ga0181397_11152991	3300017744	Seawater	MKNKPSWIGQYAAFNEALKYMYARSTGEEKSIYTPWPKF
Ga0181422_11414112	3300017762	Seawater	MGKPTPAWVGQYTAFNDALKYMYARSTGEEKSIYTPWPKFN
Ga0181410_11306792	3300017763	Seawater	MSDNAWGGQYTAFNEALKYMLDRQSGKEKSIQTPWPKFND
Ga0187220_11794422	3300017768	Seawater	MSNKAWNGQYQSFNEALKYMLDRQSGKEKSIYTPWPKFNDAVTDGL
Ga0187221_10771601	3300017769	Seawater	MSKAQKAWAGQYQAFNEALKYMNNRMHGEERSILTPC
Ga0181430_11514132	3300017772	Seawater	MSNDKLWNGQYTAFNEALKYMLDRQSGKEKSIQTP
Ga0181380_12322702	3300017782	Seawater	MKKTSEAWVGQYAAFNEALKYMYRRSTGEEKSIYTPWP
Ga0181380_12543591	3300017782	Seawater	MSKVDKAWDGQYTAFNEALKYMHNRQQGKEKSVLTPWPKFNDAATD
Ga0181583_107357693	3300017952	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWP
Ga0181580_101261171	3300017956	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWPKFNDATTDGLEWNTLTV
Ga0181590_101445235	3300017967	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWPKFNDATTDGL
Ga0181585_105153761	3300017969	Salt Marsh	MQVKKEWQSQNIDFNDALNYMKRRQEGTEKSIYTPWPKFNDAGTDG
Ga0206124_103825121	3300020175	Seawater	MSKPTPAWVGQYTAFNDALKYMYARSTGDEKSIYTP
Ga0206129_100001641	3300020182	Seawater	MSKPTPAWVGQYTAFNDALKYMYARSTGDEKSIYTPWPKFND
Ga0211699_102736161	3300020410	Marine	MSKIKPAWDGQYQAFNEALKYMLARQSGKEKSIQT
Ga0211622_102543502	3300020430	Marine	MSKKPAWNGQYESFNEALKYMFQRQSGEEKSIYTPWPKFNDATTDGLEWNTLTV
Ga0211576_106114141	3300020438	Marine	MSDNAWGGQYTAFNEALKYMLDRQSGKEKSIQTPWPKFNDAITDGLEWNTLTV
Ga0211545_101199823	3300020452	Marine	MKKKESWVGQYAAFNEALKYMYARSTGEEKSIYTPWPK
Ga0213860_104045612	3300021368	Seawater	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWPKFNDATTDG
Ga0212025_10290761	3300022057	Aqueous	MSNIEQAWNGQHTAFQDALKYMLNRQTGKEKSIYTPWPKFNDATTDGLEWNS
Ga0212026_10398623	3300022069	Aqueous	MQRKHEWQSQHVDYNEALKYMKRRQEGTEKSIYTPWPK
Ga0196899_11622111	3300022187	Aqueous	MSKPTPGWGGQFSAFKEALKYMSARQSGEEKSIYTPWPKFN
Ga0224504_104572192	3300022308	Sediment	MSKAQEEWAGQYTAFNEALKYMTKRANGEEKSIYTPWAKFNDATTDGLEWNT
(restricted) Ga0233411_100058921	3300023112	Seawater	MSRPTEGWVGQYAAFNEALKYMQGRQNGTEKSIYTPWPKFNDAATDGL
(restricted) Ga0233411_100627171	3300023112	Seawater	MSKTKKHWEGQYDSFNVALKYMLDRQTGIEKSIFTPWHKFNDAG
Ga0255751_100804391	3300023116	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWPKFNDATTDGLEW
Ga0255761_105767461	3300023170	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYTPWPKFND
Ga0255766_101412891	3300023172	Salt Marsh	MSKPTEEWVGQYASFNDALKYMVKRANGEEKSIYT
Ga0233402_10241984	3300024229	Seawater	MSKTKESWSGQHTAFNEALKYMFRRSTGEEKSIYTPWPKFNDATTDGLEWNTLTV
Ga0228635_10482711	3300024328	Seawater	MGKPTPAWVGQYTAFNDALKYMYARSTGEEKSIYTPWPKFNDAATDG
(restricted) Ga0255045_102067412	3300024528	Seawater	MKKTSEAWVGQYAAFNEALKYMYRRSTGEEKSIYTPWPKFNDAA
Ga0255280_10430961	3300024555	Freshwater	MSKPEKAWNGQYASFNEALKYMQKRAAGQEKSIYTPWPKFND
Ga0208018_1167393	3300025057	Marine	MSKPEEAWVGQYAAFNDALKYMYKRANGEEKSIYTP
Ga0208010_11129061	3300025097	Marine	MNKLKPQWGGQYQNFNDALKYMLDRQNGDEKSIFTPWPKFNDAGTDGLEWNTLT
Ga0208158_10770692	3300025110	Marine	MSKIKPAWDGQYQSFNEALKYMLARQSGKEKSIQTPWPKFNDAITDGLEWN
Ga0208160_10789581	3300025647	Aqueous	MSKPTESWIGQYAAFNDALKYMHARSVGEEKSIYTPWPKFNDAT
Ga0209757_102109351	3300025873	Marine	MSKVKPAWDGQYQAFNEALKYMLARQSGKEKSIQTPWPKFND
Ga0207985_11293482	3300026203	Marine	MSKTNDAWIGQYAAFNEALKYMYKRSTGEEKSIYTPWPKFNDATTDG
Ga0208133_100503111	3300027631	Estuarine	MSKPTESWIGQYAAFNEALKYMYKRQTGEEKSIYT
Ga0208133_11653631	3300027631	Estuarine	MSKPTESWIGQYAAFNEALKYMYKRQTGEEKSIYTPWPKFNDATTDGLEW
Ga0209190_11700351	3300027736	Freshwater Lake	MSKPTESWIGQYAAFNDALKYMYKRQTGEEKSIYTPWPK
Ga0209121_101821471	3300027742	Marine	MKKTSEAWVGQYAAFNEALKYMYRRSTGEEKSIYTPWPKFN
Ga0209502_104299061	3300027780	Marine	MSKSTGAWIGQFAAFNEALKYMYARQKGEEKSIYTPWPKFNDAA
Ga0209830_102472671	3300027791	Marine	MSNEKPWNGQYTAFNEALKYMLDRQSGKEKSIQTPWLK
Ga0209830_104188233	3300027791	Marine	MGKTDKSWVGQHAAFSEALKYMSARSKGEEKSIYTPWPKFNDAATDGLEWN
Ga0209013_102278173	3300027858	Marine	MKKKESWIGQYAAFNEALKYMHARSTGDEKSIYTPWPKFNDAATD
(restricted) Ga0233415_100275665	3300027861	Seawater	MSNKSGSWVGQYAAFNEALKYMYARQKGEEKSIYTPW
Ga0209165_101644861	3300027978	Marine Sediment	MSKTKESWVGQYTAFNEALKYMFRRSTGEEKSIYTPWPKFN
(restricted) Ga0233413_100242501	3300027996	Seawater	MSKPTPAWVGQYTAFNDALKYMYARSTGDEKSIYTPWPKFNDAATDGLE
(restricted) Ga0233413_100418255	3300027996	Seawater	MWNGQHTAFQEALRYMLDRQSGKEKSIYTPWPKFNDAITDGLEWN
Ga0228608_10395534	3300028136	Seawater	MSKTKESWSGQHTAFNEALKYMFRRSTGEEKSIYTPWPKFN
Ga0308023_10636681	3300031167	Marine	MGKTENAWVGQYSNFNEALKYMLARSNGEEKSIYTPWPKFNDAATD
Ga0307378_101578861	3300031566	Soil	MSKATEAWIGQYAAFNEALKYMRGRQNGTEKSIYTPW
Ga0307378_103470731	3300031566	Soil	MSRQKPAWGGQNESFNEALKYMLNRQKGLEKSIYT
Ga0307378_108597673	3300031566	Soil	MSRPKPAWVGQYEAFNDALKYMYARSTGDEKSIYTPWPKFNDACTDGLE
Ga0307376_102115305	3300031578	Soil	MSKPTESWIGQYAAFNEALKYMYKRQTGEEKSIYTPWPK
Ga0307993_11049991	3300031602	Marine	MSKPQESWVGQHAAFSEALKYMNARQKGEEKSIYTPWPKFNDAATD
Ga0307986_101475554	3300031659	Marine	MSRPTEEWVGQYAAFNEALKYMKGRQEGTEKSIYTPWPKFNDAA
Ga0308011_101868381	3300031688	Marine	MSKPQESWVGQHAAFSEALKYMNARQKGEEKSIYTPWPKFNDAAT
Ga0308002_10651723	3300031703	Marine	MTDKKAWGGQYTAFNEALKYMLDRQSGKEKSIQTPWPKFNDA
Ga0315320_104957231	3300031851	Seawater	MKKTSEAWVGQYAAFNEALKYMFKRSTGEEKSIYTPWPKFNDAATDGIEWNTL
Ga0315315_101983981	3300032073	Seawater	MKEQWESQHSDFNEALKYMKRRQQGLEKSIFTPWPK
Ga0316207_100302581	3300032212	Microbial Mat	MKKKESWVGQYAAFNEALKYMYARSTGEEKSIYTPWPKFNDAATDGIE
Ga0316204_106515181	3300032373	Microbial Mat	MAKPTEGWVGQYAAFNEALKYMQGRQNGTEKSIYTPWPKF
Ga0314858_009827_3_134	3300033742	Sea-Ice Brine	MSKPTESWTGQYAAFNEALKYMYARQKGEEKSIYTPWPKFNDAA
Ga0314858_199820_387_512	3300033742	Sea-Ice Brine	MKNKPSWIGQYAAFNDALKYMYARSTGDEKSIYTPWPKFNDA
Ga0335035_0694174_413_523	3300034105	Freshwater	MSKLQQEWAGQYTAFNDAIKYMINRASGEEKSIYTPW

Hidden Markov Model


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