Metagenome Family F090381

Overview

Basic Information

• Family ID: F090381
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 45 residues
• Representative Sequence: MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
• Number of Associated Samples: 80
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 77.78 %
• % of genes near scaffold ends (potentially truncated): 22.22 %
• % of genes from short scaffolds (< 2000 bps): 74.07 %
• Associated GOLD sequencing projects: 75
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (67.593 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.444 % of family members)
• Environment Ontology (ENVO): Unclassified (51.852 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (60.185 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 24.32%
  β-sheet: 18.92%
  Coil/Unstructured: 56.76%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01327	Pep_deformylase	53.70
PF01503	PRA-PH	11.11
PF12850	Metallophos_2	4.63
PF00303	Thymidylat_synt	2.78
PF13394	Fer4_14	1.85
PF02463	SMC_N	1.85
PF13476	AAA_23	1.85
PF07659	DUF1599	0.93
PF04984	Phage_sheath_1	0.93
PF00082	Peptidase_S8	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	53.70
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	2.78
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
All Organisms	root	All Organisms	32.41 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Viruses	superkingdom	All Organisms → Viruses	28.70 %
cellular organisms	root	All Organisms → cellular organisms	3.70 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.70 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.78 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.78 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.85 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.78 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.85 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002408|B570J29032_109139106	Not Available	608
3300002408|B570J29032_109283383	Not Available	670
3300002408|B570J29032_109421351	Not Available	752
3300002835|B570J40625_100903889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764
3300003497|JGI25925J51416_10055979	Not Available	1029
3300003986|Ga0063233_10211827	Not Available	596
3300004448|Ga0065861_1174383	All Organisms → Viruses → Predicted Viral	1434
3300005517|Ga0070374_10430619	Not Available	662
3300005527|Ga0068876_10006814	Not Available	7737
3300005527|Ga0068876_10160727	All Organisms → cellular organisms → Bacteria	1317
3300005581|Ga0049081_10107553	Not Available	1037
3300005581|Ga0049081_10119116	Not Available	977
3300005581|Ga0049081_10139291	Not Available	892
3300005582|Ga0049080_10074980	All Organisms → Viruses → Predicted Viral	1158
3300005584|Ga0049082_10023224	All Organisms → Viruses → Predicted Viral	2153
3300005584|Ga0049082_10076188	All Organisms → Viruses → Predicted Viral	1177
3300005662|Ga0078894_10175745	All Organisms → Viruses → Predicted Viral	1932
3300005662|Ga0078894_10303945	Not Available	1447
3300005662|Ga0078894_10597820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	983
3300005662|Ga0078894_11257909	Not Available	624
3300005941|Ga0070743_10224781	Not Available	613
3300006484|Ga0070744_10067431	Not Available	1041
3300006484|Ga0070744_10088208	Not Available	898
3300006641|Ga0075471_10000468	Not Available	24175
3300007549|Ga0102879_1047065	All Organisms → Viruses → Predicted Viral	1387
3300007550|Ga0102880_1043058	Not Available	1215
3300007559|Ga0102828_1098299	Not Available	711
3300007590|Ga0102917_1303764	Not Available	550
3300007597|Ga0102919_1241179	Not Available	564
3300007600|Ga0102920_1024365	Not Available	1830
3300007618|Ga0102896_1001021	Not Available	9916
3300007620|Ga0102871_1043060	Not Available	1338
3300007630|Ga0102903_1055419	Not Available	1107
3300007716|Ga0102867_1153044	Not Available	625
3300008055|Ga0108970_11307357	Not Available	1084
3300008107|Ga0114340_1046184	Not Available	3571
3300008107|Ga0114340_1058223	All Organisms → Viruses → Predicted Viral	1667
3300008107|Ga0114340_1229828	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	586
3300008110|Ga0114343_1193126	Not Available	597
3300008111|Ga0114344_1167643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	732
3300008113|Ga0114346_1105348	All Organisms → Viruses → Predicted Viral	1283
3300008113|Ga0114346_1192796	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	822
3300008116|Ga0114350_1163836	Not Available	598
3300008117|Ga0114351_1187975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1093
3300008120|Ga0114355_1144141	Not Available	856
3300008267|Ga0114364_1154980	Not Available	624
3300009050|Ga0102909_1065987	Not Available	893
3300009159|Ga0114978_10880785	Not Available	501
3300009161|Ga0114966_10218066	Not Available	1197
3300009163|Ga0114970_10002389	Not Available	14014
3300009163|Ga0114970_10562369	Not Available	616
3300009180|Ga0114979_10816358	Not Available	522
3300010885|Ga0133913_10504609	Not Available	3187
3300011010|Ga0139557_1006831	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2351
3300011268|Ga0151620_1015965	All Organisms → Viruses → Predicted Viral	2643
3300011268|Ga0151620_1039300	Not Available	1586
3300012347|Ga0157142_1008355	Not Available	1757
3300013004|Ga0164293_10691920	Not Available	654
3300013005|Ga0164292_10621492	Not Available	696
3300017774|Ga0181358_1135001	Not Available	856
3300017774|Ga0181358_1169876	Not Available	732
3300017784|Ga0181348_1291300	Not Available	550
3300019784|Ga0181359_1000726	Not Available	7806
3300019784|Ga0181359_1005684	All Organisms → Viruses → Predicted Viral	4092
3300019784|Ga0181359_1041646	Not Available	1779
3300019784|Ga0181359_1070156	Not Available	1328
3300019784|Ga0181359_1173218	Not Available	720
3300020048|Ga0207193_1232171	Not Available	1416
3300020141|Ga0211732_1007082	Not Available	8232
3300020151|Ga0211736_10678335	Not Available	818
3300020159|Ga0211734_10790414	Not Available	875
3300020160|Ga0211733_11086081	All Organisms → Viruses → Predicted Viral	1704
3300020205|Ga0211731_10474085	Not Available	759
3300020506|Ga0208091_1015253	Not Available	921
3300020539|Ga0207941_1029352	Not Available	770
3300020544|Ga0207937_1059713	Not Available	503
3300020564|Ga0208719_1038445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	894
3300021961|Ga0222714_10011579	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7490
3300021961|Ga0222714_10120653	Not Available	1620
3300021961|Ga0222714_10654370	Not Available	518
3300023174|Ga0214921_10019599	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	7305
3300024346|Ga0244775_10001872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	23644
3300024346|Ga0244775_10137994	All Organisms → Viruses	2061
3300024346|Ga0244775_10156684	All Organisms → Viruses → Predicted Viral	1921
3300025732|Ga0208784_1014249	All Organisms → Viruses → Predicted Viral	2657
3300027220|Ga0208927_1022386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1238
3300027244|Ga0208173_1068127	Not Available	619
3300027581|Ga0209651_1003922	Not Available	5145
3300027608|Ga0208974_1017039	All Organisms → Viruses → Predicted Viral	2288
3300027608|Ga0208974_1142786	Not Available	613
3300027644|Ga0209356_1007886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	3829
3300027754|Ga0209596_1075063	All Organisms → Viruses → Predicted Viral	1667
3300027756|Ga0209444_10210756	Not Available	698
3300027816|Ga0209990_10011693	Not Available	5355
3300031758|Ga0315907_10079136	All Organisms → Viruses	2837
3300031758|Ga0315907_10114099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2309
3300031758|Ga0315907_11199219	Not Available	531
3300031784|Ga0315899_10936986	Not Available	777
3300031787|Ga0315900_11044848	Not Available	532
3300031951|Ga0315904_10615271	Not Available	931
3300032092|Ga0315905_10559759	All Organisms → Viruses → Predicted Viral	1041
3300033992|Ga0334992_0052418	Not Available	2316
3300033994|Ga0334996_0007892	Not Available	7150
3300034013|Ga0334991_0012339	Not Available	5359
3300034022|Ga0335005_0681108	Not Available	546
3300034082|Ga0335020_0006198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	7552
3300034104|Ga0335031_0013426	Not Available	6017
3300034104|Ga0335031_0140833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1674

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Plants	Host-Associated → Plants	0.93%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.93%
Marine	Environmental → Aquatic → Marine	23.15%
Leaf	Host-Associated → Plants → Leaf	0.93%

Type

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.26%
Lake	Environmental → Aquatic → Freshwater → Lake	31.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.48%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.78%
Coastal	Environmental → Aquatic → Marine → Coastal	2.78%
Ice	Environmental → Aquatic → Freshwater → Ice	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.56%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.48%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.44%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.04%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.19%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.26%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.48%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.48%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental
3300003986	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)	Environmental
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental
3300012347	Freshwater microbial communities from Fish Creek, Ontario, Canada - S48	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental
3300020544	Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)	Environmental
3300020564	Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion (SPAdes)	Environmental
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental
3300024346	Whole water sample coassembly	Environmental
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental
3300027220	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 (SPAdes)	Environmental
3300027244	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 (SPAdes)	Environmental
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1091391063	3300002408	Freshwater	MNQWIEEKDGKQYWYQQYSKSEMELLKKYHVAISRMTKLNFDRIIK*
B570J29032_1092833832	3300002408	Freshwater	MNQWIEEKEGKHYWCQHFSKDELILLKKYHTAINRMTKLDYSRIMK*
B570J29032_1094213512	3300002408	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHIAISRLTKLNFDRIIK*
B570J40625_1009038891	3300002835	Freshwater	SMNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK*
JGI25925J51416_100559792	3300003497	Freshwater Lake	MNQWVEKKGDKWYWFQQYSKAELILLKKYHTAINRMTKLDYSRIIK*
Ga0063233_102118271	3300003986	Freshwater Lake	MNQWVEEKDGKQYWCQQYSKAEMELLKKYHTAINRMTKLDYSRIIK*
Ga0065861_11743833	3300004448	Marine	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHEAISRMTKLNFDRIMK*
Ga0070374_104306192	3300005517	Freshwater Lake	MNQWIEEKDGKQYWCQYFSKDELILLKKYHTAINRMTKLDYSRIIK*
Ga0068876_100068146	3300005527	Freshwater Lake	MNQWVQKKDDKWYWCQEYSKDEMALLRKYHVTISRMTKLNFDRIVK*
Ga0068876_101607273	3300005527	Freshwater Lake	MNQWVQKKDDKWYWFQQYSKDEMALLRKYHVAMSRMTKLNFDRIIK*
Ga0049081_101075532	3300005581	Freshwater Lentic	MNQWVEIRDGKSYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK*
Ga0049081_101191162	3300005581	Freshwater Lentic	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHIAISRLTKLNFDRIIK*
Ga0049081_101392912	3300005581	Freshwater Lentic	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK*
Ga0049080_100749802	3300005582	Freshwater Lentic	MNQWIEEKDGKQYWCQRYSKAEMELLKKYHVAMSRMTKLNFDRIVK*
Ga0049082_100232241	3300005584	Freshwater Lentic	SMNQWIEEKDGKQYWCQYFSKDELILLKKYHTAINRMTKLDYSRIIK*
Ga0049082_100761881	3300005584	Freshwater Lentic	MNQWVEEKDGKQYWYQQYSKAEMKLLKKYHVAISRMTKLNFDRIVK*
Ga0078894_101757452	3300005662	Freshwater Lake	MNQWVQKKDDKWYWYQQYSKDEMALLRKYRVAISRLTKLNFDRIMK*
Ga0078894_103039453	3300005662	Freshwater Lake	VNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK*
Ga0078894_105978203	3300005662	Freshwater Lake	MTQWIEAIDGKQYWCQHFPKDELVLLKKYHSAINRLTKLDYSRIIKWDHA*
Ga0078894_112579092	3300005662	Freshwater Lake	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK*
Ga0070743_102247812	3300005941	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIVK*
Ga0070744_100674313	3300006484	Estuarine	MNQWVEKKDGKYYWYQQFPKNEMKLLKRYHVAMGRMTKLDYSRIIK*
Ga0070744_100882082	3300006484	Estuarine	MTQWIEEKDGKQYWCQQYSKAEMELLKKYHTAMSRMTKLDYSRIIK*
Ga0075471_1000046811	3300006641	Aqueous	MNQWVQKKDDKWYWYQEYSKEEVTLLRKYHVAISRMTKLNFDRIVK*
Ga0102879_10470653	3300007549	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLRKYHVAISRMTKLNFDRIVK*
Ga0102880_10430582	3300007550	Estuarine	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIVK*
Ga0102828_10982992	3300007559	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIIK*
Ga0102917_13037641	3300007590	Estuarine	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIVK*
Ga0102919_12411792	3300007597	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDR
Ga0102920_10243652	3300007600	Estuarine	MNQWVEEKDGKQYWYQQYSKAEMELLKKYRVAISRLTKLNFDRIIK*
Ga0102896_10010211	3300007618	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYRVAISRLTKLNFDRIIK*
Ga0102871_10430601	3300007620	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRI
Ga0102903_10554192	3300007630	Estuarine	MNQWIEEKDGKQYWCQQYSKAEMELLKKYHTAMSRMTKLDYSRIIK*
Ga0102867_11530442	3300007716	Estuarine	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISIMTKLNFDRIIK*
Ga0108970_113073572	3300008055	Estuary	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK*
Ga0114340_10461849	3300008107	Freshwater, Plankton	QWIQKKDDKWYWYQQYSKAEMELLKKYHAAISRMTKLNFDRIIK*
Ga0114340_10582233	3300008107	Freshwater, Plankton	MNQWVEKKDSKWYWYQQFSRDEMALLRKYHTAISRMTKLNFDRIVK*
Ga0114340_12298282	3300008107	Freshwater, Plankton	MNQWVQKKDDKWYWFQQYSKDEMALLRKYHVAISRMTKLNFDRIIK*
Ga0114343_11931262	3300008110	Freshwater, Plankton	MNQWIEEKDGKQYWYQQYSKAEMELLKKYRVAISRMTKLNFDRIMK*
Ga0114344_11676432	3300008111	Freshwater, Plankton	KKDDKWYWFQQYSKDEMALLRKYHVAISRMTKLNFDRIIK*
Ga0114346_11053484	3300008113	Freshwater, Plankton	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK*
Ga0114346_11927962	3300008113	Freshwater, Plankton	MNQWVQKKDDKWYWYQEYSKEEMALLRKYHVAMSRMTKLNFDRIVK*
Ga0114350_11638361	3300008116	Freshwater, Plankton	NQWVQKKDDKWYWCQEYSKDEMALLRKYHVAISRMTKLNFDRIVK*
Ga0114351_11879751	3300008117	Freshwater, Plankton	KDSKWYWYQQFSRDEMALLRKYHTAISRMTKLNFDRIVK*
Ga0114355_11441413	3300008120	Freshwater, Plankton	MNQWVQKKDDKWYWCQEYSKDEMALLRKYHVAISRMTKLNFDRIVK*
Ga0114364_11549802	3300008267	Freshwater, Plankton	VNQWVEEKDGKQYWYQQYSKAEMELLKKYRVAISRMTKLNFDRIMK*
Ga0102909_10659873	3300009050	Estuarine	EEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK*
Ga0114978_108807852	3300009159	Freshwater Lake	MNQWVEKKDGKYYWYQQFPKNEMKLLKRYRVTIGRMTKLDYSRIIK*
Ga0114966_102180662	3300009161	Freshwater Lake	MIQWIEEKDGKQYWFQSFSKDELVLLKRYHTAINRMTKLDYSRIIK*
Ga0114970_1000238914	3300009163	Freshwater Lake	MTQWIEDMDGKQYWCQHFPKDELVLLKKYHSAINRLTKLDYSRIIKWDHA*
Ga0114970_105623691	3300009163	Freshwater Lake	MTQWVQAIDGKQYWCQSFSKDELVLLKKYHNAISRLTKLD
Ga0114979_108163581	3300009180	Freshwater Lake	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIMK*
Ga0133913_105046092	3300010885	Freshwater Lake	MNQWIEEKDGKQYWCQHFSKDELMLLKKYHTAISRLTKLDYSRIIK*
Ga0139557_10068312	3300011010	Freshwater	MTQWVEEKDGKQYWCQSFSKDELVLLKKYHTAINRMTKLNYSRIIR*
Ga0151620_10159652	3300011268	Freshwater	VNQWIEAKEGKWYWFQQFSKAEMELLKKYRVQIGRMTNTNFDRIMK*
Ga0151620_10393002	3300011268	Freshwater	MNQWVEEKDGKQYWYQQYSKDEMALLRKYRVAISRMTKLNFDRIMK*
Ga0157142_10083552	3300012347	Freshwater	MNQWVETRDGKSYLYQQFPKAEMELLKKYHKVIGRMLKIDFSRIMK*
Ga0164293_106919202	3300013004	Freshwater	MNQWIEEKDGKQYWYQQYSKAEMELLRKYHVAISRMTKLNFDRIIK*
Ga0164292_106214922	3300013005	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLRKYHVAISRMTKLNFDRIVK*
Ga0181358_11350011	3300017774	Freshwater Lake	MNQWVEKKDGKYYWYQQFPKNEMKLLKRYRVTIGRMTKLDYSRIIK
Ga0181358_11698761	3300017774	Freshwater Lake	DCSMNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIVK
Ga0181348_12913002	3300017784	Freshwater Lake	QYWCQQYSKAEMELLKKYHTAINRMTKLDYSRIIK
Ga0181359_10007267	3300019784	Freshwater Lake	MNQWVEKKGDKWYWFQQYSKAELILLKKYHTAINRMTKLDYSRIIK
Ga0181359_10056849	3300019784	Freshwater Lake	MNQWIEEKDGKQYWYQQYSKAEMELLRKYHVAISRMTKLNFDRIIK
Ga0181359_10416462	3300019784	Freshwater Lake	MNQWIEEKDGKQYWCQYFSKDELILLKKYHTAINRMTKLDYSRIIK
Ga0181359_10701563	3300019784	Freshwater Lake	MNQWVEEKDGKQYWCQQYSKAEMELLKKYHTAINRMTKLDYSRIIK
Ga0181359_11732183	3300019784	Freshwater Lake	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIVK
Ga0207193_12321712	3300020048	Freshwater Lake Sediment	VNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK
Ga0211732_100708211	3300020141	Freshwater	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHTAISRMTKLNFDRIMK
Ga0211736_106783352	3300020151	Freshwater	MNQWIEEKDGKQYWYQQYSKTEMELLKKYHVPISRMTKLNFDRIIK
Ga0211734_107904142	3300020159	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIVK
Ga0211733_110860812	3300020160	Freshwater	MNQWVEEKDGKQYWYQQYSKDEMALLRKYRAAISRMTKLNFDRIMK
Ga0211731_104740852	3300020205	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMKLLKKYHTAISRMTKLNFDRIMK
Ga0208091_10152532	3300020506	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
Ga0207941_10293522	3300020539	Freshwater	MNQWIEEKDGKQYWYQQYSKSEMELLKKYHVAISRMTKLNFDRIIK
Ga0207937_10597132	3300020544	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHIAISRLTKLNFDRIIK
Ga0208719_10384451	3300020564	Freshwater	GKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
Ga0222714_100115792	3300021961	Estuarine Water	MNQWIEEKDGKQYWCQHFLKNELILLKKYHTAINRMTKLDYSRIIK
Ga0222714_101206533	3300021961	Estuarine Water	MNQWVQKKDDKWYWYQQYSKEEMALLRKYHVAISRMTKLNFDRIIK
Ga0222714_106543701	3300021961	Estuarine Water	VNQWIEAKEGKWYWFQQFSKAEMELLKKYRVQIGRMTNTNFDRIMK
Ga0214921_100195993	3300023174	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYYVAISRMTKLNFDRIMK
Ga0244775_100018722	3300024346	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIVK
Ga0244775_101379942	3300024346	Estuarine	MTQWIEEKDGKQYWCQQYSKAEMELLKKYHTAMSRMTKLDYSRIIK
Ga0244775_101566842	3300024346	Estuarine	MNQWVEKKDGKYYWYQQFPKNEMKLLKRYHVAMGRMTKLDYSRIIK
Ga0208784_10142494	3300025732	Aqueous	MNQWVQKKDDKWYWYQEYSKEEVTLLRKYHVAISRMTKLNFDRIVK
Ga0208927_10223861	3300027220	Estuarine	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIIK
Ga0208173_10681272	3300027244	Estuarine	NQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRLTKLNFDRIVK
Ga0209651_100392210	3300027581	Freshwater Lake	DGKQYWCQQYSKAEMELLKKYHTAINRMTKLDYSRIIK
Ga0208974_10170392	3300027608	Freshwater Lentic	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHIAISRLTKLNFDRIIK
Ga0208974_11427862	3300027608	Freshwater Lentic	MNQWVEIRDGKSYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
Ga0209356_10078861	3300027644	Freshwater Lake	MNQWVEKKGDKWYWFQQYSKAELILLKKYHTAINRMTKLDYSR
Ga0209596_10750632	3300027754	Freshwater Lake	MIQWIEEKDGKQYWFQSFSKDELVLLKRYHTAINRMTKLDYSRIIK
Ga0209444_102107562	3300027756	Freshwater Lake	MNQWVEKKDGKQYWCQQYSKAEMELLKKYHTAINRMTKLDYSRIIK
Ga0209990_100116933	3300027816	Freshwater Lake	MNQWVQKKDDKWYWCQEYSKDEMALLRKYHVTISRMTKLNFDRIVK
Ga0315907_100791362	3300031758	Freshwater	MNQWVQKKDDKWYWFQQYSKDEMALLRKYHVAISRMTKLNFDRIIK
Ga0315907_101140993	3300031758	Freshwater	MNQWIEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK
Ga0315907_111992191	3300031758	Freshwater	MNQWVQKKDDKWYWFQQYSKDEMALLRKYHVAMSRMTKLNFD
Ga0315899_109369863	3300031784	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIMK
Ga0315900_110448481	3300031787	Freshwater	MNQWVEKKDSKWYWYQQFSRDEMALLRKYHTAISRMTKLNFDRIVK
Ga0315904_106152711	3300031951	Freshwater	MNQWIEEKDGKQYWYQRYSKAEMKLLKKYHIAISRMTKLNFDRIIK
Ga0315905_105597591	3300032092	Freshwater	MNQWVEEKDGKQYWYQQYSKAEMELLKKYHVAISRMTKLNFD
Ga0334992_0052418_2209_2316	3300033992	Freshwater	QYWYQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
Ga0334996_0007892_3465_3605	3300033994	Freshwater	MNQWIEEKDGKQYWCQQYSKAEMELLKKYHVAISRMTKLNFDRIIK
Ga0334991_0012339_3139_3279	3300034013	Freshwater	MNQWVQKKDDKWYWYQEYSKEEMALLRKYHVAISRMTKLNFDRIMK
Ga0335005_0681108_401_541	3300034022	Freshwater	MNQWIEEKDGKQYWYQQYSKAEMELLRKYHVAISRMTKLNFDRIVK
Ga0335020_0006198_49_189	3300034082	Freshwater	MNQWIQEIEGKLYWCQRFSKAEFILLKKYHIAFSRLTKLDYSRILK
Ga0335031_0013426_5471_5611	3300034104	Freshwater	MTQWIEEKDGKHYWCQRFSKDEIVLLKKYHTAINRLTKLDYTRVIL
Ga0335031_0140833_298_438	3300034104	Freshwater	MNQWVQKKDDKWYWYQEYSKEEMALLRKYHVAMSRMTKLNFDRIIK