Metagenome / Metatranscriptome Family F090361

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090361
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	73 residues
Representative Sequence	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Number of Associated Samples	102
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.05 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.037 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 89.19% β-sheet: 0.00% Coil/Unstructured: 10.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03729	DUF308	5.56
PF03358	FMN_red	2.78
PF01553	Acyltransferase	1.85
PF13586	DDE_Tnp_1_2	0.93
PF07729	FCD	0.93
PF09084	NMT1	0.93
PF13701	DDE_Tnp_1_4	0.93
PF02371	Transposase_20	0.93
PF01694	Rhomboid	0.93
PF13358	DDE_3	0.93
PF00128	Alpha-amylase	0.93
PF00702	Hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	5.56
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.93
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.93
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.93
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.93
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.93
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.30 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.30 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.30 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.89 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.89 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.41 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	53.70 %
Unclassified	root	N/A	28.70 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	48.15 %
Unclassified	root	N/A	28.70 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	42.59 %
Unclassified	root	N/A	28.70 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.70 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	22.22 %
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.70 %
Mycobacterium sp. 155	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	22.22 %
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402HC94I	Not Available	517	Open in IMG/M
3300000956\|JGI10216J12902_118282224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961	Open in IMG/M
3300002070\|JGI24750J21931_1040534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	706	Open in IMG/M
3300002245\|JGIcombinedJ26739_101555049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	558	Open in IMG/M
3300003219\|JGI26341J46601_10003360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	5299	Open in IMG/M
3300005328\|Ga0070676_10175789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1388	Open in IMG/M
3300005334\|Ga0068869_101510281	Not Available	596	Open in IMG/M
3300005337\|Ga0070682_100422429	Not Available	1013	Open in IMG/M
3300005347\|Ga0070668_101585923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	599	Open in IMG/M
3300005353\|Ga0070669_100809631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	796	Open in IMG/M
3300005355\|Ga0070671_101172622	Not Available	676	Open in IMG/M
3300005367\|Ga0070667_100641192	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005436\|Ga0070713_101459456	Not Available	664	Open in IMG/M
3300005440\|Ga0070705_100417899	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300005441\|Ga0070700_100403360	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005456\|Ga0070678_102237795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	519	Open in IMG/M
3300005457\|Ga0070662_100694464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	860	Open in IMG/M
3300005457\|Ga0070662_100774866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	814	Open in IMG/M
3300005536\|Ga0070697_100578027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	986	Open in IMG/M
3300005539\|Ga0068853_100115351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2390	Open in IMG/M
3300005549\|Ga0070704_101279802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	670	Open in IMG/M
3300005616\|Ga0068852_101664994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	660	Open in IMG/M
3300005617\|Ga0068859_101784517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	679	Open in IMG/M
3300005844\|Ga0068862_101446818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300005983\|Ga0081540_1227171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	661	Open in IMG/M
3300009036\|Ga0105244_10372371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	658	Open in IMG/M
3300009093\|Ga0105240_11287826	Not Available	771	Open in IMG/M
3300009098\|Ga0105245_12844053	Not Available	536	Open in IMG/M
3300009143\|Ga0099792_10703014	Not Available	654	Open in IMG/M
3300009148\|Ga0105243_11365897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	728	Open in IMG/M
3300009176\|Ga0105242_10080058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2730	Open in IMG/M
3300009177\|Ga0105248_10938611	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300009545\|Ga0105237_11976936	Not Available	591	Open in IMG/M
3300010046\|Ga0126384_11557361	Not Available	621	Open in IMG/M
3300010159\|Ga0099796_10298820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	682	Open in IMG/M
3300010371\|Ga0134125_11296034	Not Available	795	Open in IMG/M
3300010375\|Ga0105239_10900739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1015	Open in IMG/M
3300010399\|Ga0134127_10195529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1876	Open in IMG/M
3300010400\|Ga0134122_11025584	Not Available	811	Open in IMG/M
3300010401\|Ga0134121_12951761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300010403\|Ga0134123_11903442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	651	Open in IMG/M
3300012685\|Ga0137397_10624264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300012685\|Ga0137397_10850276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	677	Open in IMG/M
3300012902\|Ga0157291_10102863	Not Available	780	Open in IMG/M
3300012903\|Ga0157289_10165431	Not Available	695	Open in IMG/M
3300012908\|Ga0157286_10003833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2560	Open in IMG/M
3300012908\|Ga0157286_10183093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	694	Open in IMG/M
3300012911\|Ga0157301_10103970	Not Available	839	Open in IMG/M
3300012913\|Ga0157298_10152189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	693	Open in IMG/M
3300012922\|Ga0137394_11429743	Not Available	552	Open in IMG/M
3300012948\|Ga0126375_11409326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	591	Open in IMG/M
3300012951\|Ga0164300_10273256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	870	Open in IMG/M
3300012961\|Ga0164302_11859915	Not Available	510	Open in IMG/M
3300013102\|Ga0157371_10512394	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300013296\|Ga0157374_12678890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	526	Open in IMG/M
3300014745\|Ga0157377_11180784	Not Available	591	Open in IMG/M
3300015201\|Ga0173478_10691632	Not Available	544	Open in IMG/M
3300015242\|Ga0137412_11200977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	532	Open in IMG/M
3300017792\|Ga0163161_11150228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	669	Open in IMG/M
3300018465\|Ga0190269_11057602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300019356\|Ga0173481_10117528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1049	Open in IMG/M
3300019361\|Ga0173482_10333620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	680	Open in IMG/M
3300020579\|Ga0210407_10144890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1828	Open in IMG/M
3300021363\|Ga0193699_10253399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	733	Open in IMG/M
3300021401\|Ga0210393_10562658	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300021404\|Ga0210389_10020822	All Organisms → cellular organisms → Bacteria	5066	Open in IMG/M
3300021475\|Ga0210392_10051608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2535	Open in IMG/M
3300021479\|Ga0210410_11834773	Not Available	501	Open in IMG/M
3300023071\|Ga0247752_1086967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	528	Open in IMG/M
3300025315\|Ga0207697_10281228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	737	Open in IMG/M
3300025321\|Ga0207656_10282781	Not Available	818	Open in IMG/M
3300025893\|Ga0207682_10264225	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300025898\|Ga0207692_10478805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	787	Open in IMG/M
3300025899\|Ga0207642_10240321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1022	Open in IMG/M
3300025905\|Ga0207685_10154137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300025908\|Ga0207643_10414748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	853	Open in IMG/M
3300025916\|Ga0207663_10070523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2252	Open in IMG/M
3300025926\|Ga0207659_10481897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1048	Open in IMG/M
3300025928\|Ga0207700_11665249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	563	Open in IMG/M
3300025931\|Ga0207644_11663444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	535	Open in IMG/M
3300025936\|Ga0207670_11122128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	664	Open in IMG/M
3300025939\|Ga0207665_10472609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	965	Open in IMG/M
3300025942\|Ga0207689_10997873	Not Available	706	Open in IMG/M
3300025981\|Ga0207640_10563114	Not Available	959	Open in IMG/M
3300026035\|Ga0207703_10380694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1305	Open in IMG/M
3300026067\|Ga0207678_11054096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	720	Open in IMG/M
3300026075\|Ga0207708_10159012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1783	Open in IMG/M
3300026088\|Ga0207641_10905774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	876	Open in IMG/M
3300026088\|Ga0207641_11296518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	729	Open in IMG/M
3300026118\|Ga0207675_101291638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	750	Open in IMG/M
3300026142\|Ga0207698_11333971	Not Available	732	Open in IMG/M
3300027812\|Ga0209656_10000968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	18532	Open in IMG/M
3300027812\|Ga0209656_10270920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300027825\|Ga0209039_10018908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3563	Open in IMG/M
3300028597\|Ga0247820_10696599	Not Available	708	Open in IMG/M
3300028608\|Ga0247819_10846591	Not Available	569	Open in IMG/M
3300031057\|Ga0170834_106173198	Not Available	557	Open in IMG/M
3300031231\|Ga0170824_122371159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	514	Open in IMG/M
3300031474\|Ga0170818_107108501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	645	Open in IMG/M
3300031715\|Ga0307476_10475289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	926	Open in IMG/M
3300031718\|Ga0307474_10123014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1948	Open in IMG/M
3300031740\|Ga0307468_100344059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300031962\|Ga0307479_10582221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1101	Open in IMG/M
3300032180\|Ga0307471_103585132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 155	549	Open in IMG/M
3300034819\|Ga0373958_0225978	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.19%
Host-Associated	Host-Associated	39.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.48%
Plants	Host-Associated → Plants	39.81%
Aquatic	Environmental → Aquatic	3.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.52%
Freshwater	Environmental → Aquatic → Freshwater	3.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.59%
Loam	Environmental → Terrestrial → Soil → Loam	13.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_05649710	2189573004	Grass Soil	MSETRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR
JGI10216J12902_1182822241	3300000956	Soil	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
JGI24750J21931_10405341	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTXQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
JGIcombinedJ26739_1015550491	3300002245	Forest Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR*
JGI26341J46601_100033602	3300003219	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTTDAGQQIKDRFGH*
Ga0070676_101757891	3300005328	Miscanthus Rhizosphere	RNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0068869_1015102813	3300005334	Miscanthus Rhizosphere	LLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070682_1004224291	3300005337	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070668_1015859231	3300005347	Switchgrass Rhizosphere	VVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070669_1008096311	3300005353	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTA
Ga0070671_1011726222	3300005355	Switchgrass Rhizosphere	LLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070667_1006411921	3300005367	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070713_1014594561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070701_103765321	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0070705_1004178991	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	NILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070700_1004033601	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	WKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070678_1022377951	3300005456	Miscanthus Rhizosphere	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0070662_1006944642	3300005457	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070662_1007748661	3300005457	Corn Rhizosphere	KGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070697_1005780271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0068853_1001153511	3300005539	Corn Rhizosphere	LRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0070704_1012798021	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKD
Ga0068852_1016649941	3300005616	Corn Rhizosphere	RNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0068859_1017845172	3300005617	Switchgrass Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0068862_1014468182	3300005844	Switchgrass Rhizosphere	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0081540_12271712	3300005983	Tabebuia Heterophylla Rhizosphere	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKDHVDR*
Ga0074055_101581511	3300006573	Soil	MSEPRTILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRL
Ga0105244_103723711	3300009036	Miscanthus Rhizosphere	RIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105240_112878262	3300009093	Corn Rhizosphere	MSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105245_128440532	3300009098	Miscanthus Rhizosphere	AAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR
Ga0099792_107030141	3300009143	Vadose Zone Soil	VTRRRAYHRFIGLWLGSKARKGTEMSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDHVDR*
Ga0105243_113658971	3300009148	Miscanthus Rhizosphere	RVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105242_100800581	3300009176	Miscanthus Rhizosphere	ILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0105248_109386111	3300009177	Switchgrass Rhizosphere	PRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105237_119769362	3300009545	Corn Rhizosphere	MSEPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0126384_115573612	3300010046	Tropical Forest Soil	MSAPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0099796_102988202	3300010159	Vadose Zone Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKEHVDR*
Ga0134125_112960342	3300010371	Terrestrial Soil	SVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0105239_109007392	3300010375	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0134127_101955293	3300010399	Terrestrial Soil	MSAPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQ
Ga0134122_110255841	3300010400	Terrestrial Soil	MSAPTNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKEVKDHVDR*
Ga0134121_129517611	3300010401	Terrestrial Soil	KMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0134123_119034421	3300010403	Terrestrial Soil	DRKPRKGTEMSVPRNILRIVLLAAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVNAHVDR*
Ga0134123_119368991	3300010403	Terrestrial Soil	AAGWLDAAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR*
Ga0137397_106242641	3300012685	Vadose Zone Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREEKATVDLTTQEIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR*
Ga0137397_108502761	3300012685	Vadose Zone Soil	MSVPRDILRIVLLAAAAGLLAVAASVSREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0157291_101028632	3300012902	Soil	MSVPRNMLRVVLLTAAAGLLAVAASVLREKKATVDLTAQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0157289_101654312	3300012903	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGARAAVIGRLTADAVQQVKDHIDR*
Ga0157286_100038331	3300012908	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAIQQVKDHIDR
Ga0157286_101830931	3300012908	Soil	TAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKEHIDR*
Ga0157301_101039702	3300012911	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDPTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKNHIDR*
Ga0157298_101521891	3300012913	Soil	SVHWSVARIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0137394_114297431	3300012922	Vadose Zone Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKVTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKDHVDR*
Ga0126375_114093261	3300012948	Tropical Forest Soil	MSVPRNILRIVLLAAAAGLLAVAASVIREKKMTVDLTTQQIEDAISALDPGTRAAVIGRLTADAVHQVKDHVDR*
Ga0164300_102732561	3300012951	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0164302_118599152	3300012961	Soil	SVARIESPWKGTTMSVPRNILRVVLLTAAAGLPAVAASGLRVKKATVELTTQQSEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0157371_105123942	3300013102	Corn Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAV*
Ga0157374_126788901	3300013296	Miscanthus Rhizosphere	WSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIHR*
Ga0157377_111807842	3300014745	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDH
Ga0173478_106916322	3300015201	Soil	MSGPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR*
Ga0137412_112009772	3300015242	Vadose Zone Soil	MRVPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDHVDR*
Ga0163161_111502281	3300017792	Switchgrass Rhizosphere	PRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0190269_110576021	3300018465	Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKETVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0173481_101175281	3300019356	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0173482_103336201	3300019361	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210407_101448902	3300020579	Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0193699_102533992	3300021363	Soil	MSVDRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0210393_105626582	3300021401	Soil	MSVPRNTLRILLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210389_100208223	3300021404	Soil	MSVPRNTLRIVLLTAAAGSLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0210392_100516083	3300021475	Soil	MSVPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0210410_118347732	3300021479	Soil	RIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVQQVKDRVDR
Ga0247752_10869671	3300023071	Soil	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDH
Ga0207697_102812281	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207656_102827813	3300025321	Corn Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRGAVIGRLTADAVQQVKDHIDR
Ga0207682_102642252	3300025893	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDSGVRAAVIGRLTADAVQQVKDHIDR
Ga0207692_104788051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVVGRL
Ga0207642_102403211	3300025899	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207685_101541371	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ENPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207643_104147481	3300025908	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADEVQQVKDHIDR
Ga0207663_100705232	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPRNILRVLLLTAAAGLLAVAASVLREKKATVDLTTKQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207659_104818971	3300025926	Miscanthus Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQ
Ga0207700_116652491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPRNILRIVLLTAEAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207644_116634441	3300025931	Switchgrass Rhizosphere	VVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207670_111221281	3300025936	Switchgrass Rhizosphere	KGTEMSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207665_104726091	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207689_109978732	3300025942	Miscanthus Rhizosphere	LLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207640_105631141	3300025981	Corn Rhizosphere	TAAAGLLAVAASVLREKKATVDLTAQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVD
Ga0207703_103806941	3300026035	Switchgrass Rhizosphere	MSVPRNILRVVLLTAAAGLLAVAASVLREKKATVELTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKD
Ga0207678_110540961	3300026067	Corn Rhizosphere	GVTRRRLPSVHWSVARIESPWKGTEMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207708_101590121	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AAAGLLAVAASVLREKKATADLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207641_109057741	3300026088	Switchgrass Rhizosphere	PTIVHWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0207641_112965181	3300026088	Switchgrass Rhizosphere	ILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0207675_1012916381	3300026118	Switchgrass Rhizosphere	MSEPRNILRIVLLAAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGTRAAVIGRLTADAVKQVKEHVDR
Ga0207698_113339711	3300026142	Corn Rhizosphere	HWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0209656_100009686	3300027812	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTTDAGQQIKDRFGH
Ga0209656_102709202	3300027812	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVAANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTADAGQQIKDRFGH
Ga0209039_100189083	3300027825	Bog Forest Soil	MSVTRDILRATLLSAAAGLLAVGANTLRNALVEKRETADLTTQQIEDAISALDPSTRAAVIGRLTADAGQQIKDRFGH
Ga0247820_106965991	3300028597	Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHI
Ga0247819_108465912	3300028608	Soil	MSAPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADA
Ga0170834_1061731981	3300031057	Forest Soil	MSVPRNILRIVLLAGAAGLLAVAASVLRDKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVKQVKDHVDR
Ga0170824_1223711591	3300031231	Forest Soil	SDRKPRKEAEMSVPRDILRIVLLAAAGAGLLAVAASVLREKKETVDLTTQQIEAAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0170818_1071085011	3300031474	Forest Soil	MSVPRDILRIVLLAAAGAGLLAVAASVLREKKETVDLTTQQIEAAISALDPGVRAAVIGRLTADAVQQVKDHVDR
Ga0307476_104752892	3300031715	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDRVDR
Ga0307474_101230141	3300031718	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKNHVDR
Ga0307468_1003440593	3300031740	Hardwood Forest Soil	MSVPRNILRIVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0307479_105822214	3300031962	Hardwood Forest Soil	MSVPRNTLRIVLLTAAAGLLAVAASVLREKKEIVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKKPR
Ga0307471_1035851321	3300032180	Hardwood Forest Soil	LPSVHWSVARIESPWKGTKMSVPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR
Ga0373958_0225978_252_476	3300034819	Rhizosphere Soil	MSAPRNILRVVLLTAAAGLLAVAASVLREKKATVDLTTQQIEDAISALDPGVRAAVIGRLTADAVQQVKDHIDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090361

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences