NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090345

Metagenome Family F090345

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090345
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 55 residues
Representative Sequence MPHLYKRAANHWKTPTRFDRRETEQEEESQPLRKTGRPRSLKDITKAKPRRAPWK
Number of Associated Samples 39
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.92 %
% of genes near scaffold ends (potentially truncated) 21.30 %
% of genes from short scaffolds (< 2000 bps) 81.48 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (64.815 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(55.556 % of family members)
Environment Ontology (ENVO) Unclassified
(55.556 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.111 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.43%    β-sheet: 0.00%    Coil/Unstructured: 91.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF13481AAA_25 5.56
PF01381HTH_3 1.85
PF09250Prim-Pol 1.85
PF08774VRR_NUC 1.85
PF10263SprT-like 0.93
PF12965DUF3854 0.93
PF04505CD225 0.93



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.52 %
UnclassifiedrootN/A31.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005562|Ga0058697_10002647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium5831Open in IMG/M
3300005562|Ga0058697_10005701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium3992Open in IMG/M
3300005562|Ga0058697_10011992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2889Open in IMG/M
3300005562|Ga0058697_10032273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1916Open in IMG/M
3300005562|Ga0058697_10092922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1238Open in IMG/M
3300005562|Ga0058697_10428390Not Available661Open in IMG/M
3300005562|Ga0058697_10704315Not Available538Open in IMG/M
3300005562|Ga0058697_10707862All Organisms → cellular organisms → Bacteria → Terrabacteria group536Open in IMG/M
3300005981|Ga0081538_10133677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1160Open in IMG/M
3300006625|Ga0101569_10366976Not Available599Open in IMG/M
3300006876|Ga0079217_10168583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1083Open in IMG/M
3300006918|Ga0079216_10148834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium1216Open in IMG/M
3300007004|Ga0079218_10617068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium994Open in IMG/M
3300007790|Ga0105679_10226229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1377Open in IMG/M
3300009789|Ga0126307_10023413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4692Open in IMG/M
3300009789|Ga0126307_10033255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3978Open in IMG/M
3300009789|Ga0126307_10083336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2524Open in IMG/M
3300009789|Ga0126307_10216744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1537Open in IMG/M
3300009789|Ga0126307_10220972Not Available1521Open in IMG/M
3300009789|Ga0126307_10913902Not Available709Open in IMG/M
3300009789|Ga0126307_11259491Not Available599Open in IMG/M
3300009789|Ga0126307_11333373All Organisms → cellular organisms → Bacteria → Terrabacteria group581Open in IMG/M
3300009789|Ga0126307_11448544All Organisms → cellular organisms → Bacteria → Terrabacteria group557Open in IMG/M
3300009789|Ga0126307_11768699Not Available503Open in IMG/M
3300009840|Ga0126313_10017830All Organisms → cellular organisms → Bacteria4665Open in IMG/M
3300009840|Ga0126313_10160943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1702Open in IMG/M
3300009840|Ga0126313_10174240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1639Open in IMG/M
3300009840|Ga0126313_10586354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus897Open in IMG/M
3300009840|Ga0126313_10991860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium688Open in IMG/M
3300009840|Ga0126313_11055428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium667Open in IMG/M
3300009840|Ga0126313_11578283All Organisms → cellular organisms → Bacteria → Terrabacteria group546Open in IMG/M
3300009840|Ga0126313_11713573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium525Open in IMG/M
3300010036|Ga0126305_10003453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7374Open in IMG/M
3300010036|Ga0126305_10053069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium2305Open in IMG/M
3300010036|Ga0126305_10107221Not Available1687Open in IMG/M
3300010036|Ga0126305_10259382All Organisms → cellular organisms → Bacteria → Terrabacteria group1120Open in IMG/M
3300010036|Ga0126305_10791204Not Available644Open in IMG/M
3300010036|Ga0126305_11181891All Organisms → cellular organisms → Bacteria → Terrabacteria group528Open in IMG/M
3300010037|Ga0126304_10321677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1026Open in IMG/M
3300010037|Ga0126304_10331353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1011Open in IMG/M
3300010037|Ga0126304_11214216All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300010038|Ga0126315_10003784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium6528Open in IMG/M
3300010038|Ga0126315_10039795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae2499Open in IMG/M
3300010038|Ga0126315_10155405Not Available1356Open in IMG/M
3300010038|Ga0126315_10157246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1349Open in IMG/M
3300010038|Ga0126315_10206056Not Available1187Open in IMG/M
3300010038|Ga0126315_10508136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium769Open in IMG/M
3300010038|Ga0126315_10820421Not Available614Open in IMG/M
3300010038|Ga0126315_10966758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium569Open in IMG/M
3300010038|Ga0126315_11235197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium508Open in IMG/M
3300010039|Ga0126309_10193156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1122Open in IMG/M
3300010040|Ga0126308_10055663Not Available2312Open in IMG/M
3300010040|Ga0126308_10186156All Organisms → Viruses → Predicted Viral1329Open in IMG/M
3300010040|Ga0126308_10280282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1091Open in IMG/M
3300010040|Ga0126308_10440396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium874Open in IMG/M
3300010040|Ga0126308_10565298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium773Open in IMG/M
3300010041|Ga0126312_10422756Not Available949Open in IMG/M
3300010041|Ga0126312_10528612Not Available845Open in IMG/M
3300010041|Ga0126312_10976847Not Available619Open in IMG/M
3300010041|Ga0126312_11291212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium540Open in IMG/M
3300010042|Ga0126314_11112270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium589Open in IMG/M
3300010044|Ga0126310_10007338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4932Open in IMG/M
3300010044|Ga0126310_10365326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1017Open in IMG/M
3300010044|Ga0126310_10617725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium810Open in IMG/M
3300010045|Ga0126311_10029804All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus arcticus3346Open in IMG/M
3300010045|Ga0126311_10237132All Organisms → cellular organisms → Bacteria → Terrabacteria group1348Open in IMG/M
3300010045|Ga0126311_10248091Not Available1320Open in IMG/M
3300010045|Ga0126311_10815706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium753Open in IMG/M
3300010045|Ga0126311_10930519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium707Open in IMG/M
3300010045|Ga0126311_11524418Not Available561Open in IMG/M
3300010166|Ga0126306_10004987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium7949Open in IMG/M
3300010166|Ga0126306_10059282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2671Open in IMG/M
3300010166|Ga0126306_10877659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium726Open in IMG/M
3300010395|Ga0058701_10683360Not Available564Open in IMG/M
3300014487|Ga0182000_10001833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4159Open in IMG/M
3300014487|Ga0182000_10023987All Organisms → Viruses → Predicted Viral1642Open in IMG/M
3300014487|Ga0182000_10486422Not Available570Open in IMG/M
3300014487|Ga0182000_10559385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium544Open in IMG/M
3300014488|Ga0182001_10402224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium596Open in IMG/M
3300014488|Ga0182001_10609571Not Available526Open in IMG/M
3300014488|Ga0182001_10681648Not Available509Open in IMG/M
3300018432|Ga0190275_11326355Not Available796Open in IMG/M
3300018432|Ga0190275_11945351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium667Open in IMG/M
3300018465|Ga0190269_10549839Not Available765Open in IMG/M
3300018466|Ga0190268_10353672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium917Open in IMG/M
3300018469|Ga0190270_10690396All Organisms → cellular organisms → Bacteria → Terrabacteria group1011Open in IMG/M
3300019377|Ga0190264_10446204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium861Open in IMG/M
3300019377|Ga0190264_10689519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300019377|Ga0190264_11169480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium635Open in IMG/M
3300024430|Ga0196962_10009861All Organisms → cellular organisms → Bacteria → Proteobacteria2885Open in IMG/M
3300024430|Ga0196962_10281719Not Available544Open in IMG/M
3300030499|Ga0268259_10122774Not Available599Open in IMG/M
3300030510|Ga0268243_1105119Not Available658Open in IMG/M
3300030514|Ga0268253_10382792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium506Open in IMG/M
3300031824|Ga0307413_11377024Not Available620Open in IMG/M
3300031852|Ga0307410_10357198All Organisms → Viruses → Predicted Viral1169Open in IMG/M
3300031901|Ga0307406_12002697Not Available518Open in IMG/M
3300031903|Ga0307407_10617808Not Available809Open in IMG/M
3300031995|Ga0307409_101341559Not Available741Open in IMG/M
3300032002|Ga0307416_100218823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium1824Open in IMG/M
3300032004|Ga0307414_11570591All Organisms → cellular organisms → Bacteria → Terrabacteria group613Open in IMG/M
3300032004|Ga0307414_11939677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300032159|Ga0268251_10005165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3495Open in IMG/M
3300032159|Ga0268251_10076115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1153Open in IMG/M
3300032159|Ga0268251_10088109Not Available1087Open in IMG/M
3300032159|Ga0268251_10219948Not Available753Open in IMG/M
3300032159|Ga0268251_10280572All Organisms → cellular organisms → Bacteria → Terrabacteria group684Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil55.56%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave13.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere7.41%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.78%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.93%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006625Soil microbial communities from the Leymus chinensis steppe, China - after adding 10.5 g N m- 2, yr-1EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010395Agave microbial communities from Guanajuato, Mexico - Or.Ma.eHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300030499Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058697_10002647113300005562AgaveMIYKRAANHWKTPSRFERRETDQGEESQPLRRKSGRVRSLKDITKAKPRRRALWK*
Ga0058697_1000570183300005562AgaveMIYKRAANHWKRPTRFDRTECEQEEEESQPLRRKSGRPRSLKDITKAKPRRRAPWK*
Ga0058697_1001199273300005562AgaveMPHLYKRPGNHWKTPTRFDRRETEQEESQPLRKTGTPRSLKDITKAKPRRAPWK*
Ga0058697_1003227343300005562AgaveMGGVLMPHLYKRAGNHWKTPTRFERRESEQEESQPLLWKSGRPRSLKEITKAKPRRRAPWK*
Ga0058697_1009292233300005562AgaveMPHLYKRPGNHWKAPTRFERRETEQEEESQPLRKTGRPWSLKDIIKAKPRRAPWK*
Ga0058697_1042839023300005562AgaveMHLYKRPGNHWRTPPPFERRQTEKEENSQPLRKTGRPRSLKDITKAKMRWRAPWK*
Ga0058697_1070431513300005562AgaveMPLYKRPGNHWKRPPRFDRRETEQEEEESQPLWRTGASRSLKDIIKAKPRRAPWK*
Ga0058697_1070786213300005562AgaveMPHLYKRPGNYWKTPTRFERRETEQEEESQPLRKTGRPWSLKDIIKAKPRRA
Ga0081538_1013367743300005981Tabebuia Heterophylla RhizosphereMIYKRAANHWKRPSRLDRRESEQEEESQPLRKRGRPRSLKDITKARPRRAPWK*
Ga0101569_1036697623300006625SoilMIYKRAGNHWKTLTRFERRETDQGEESQPLRRKTGTPRSLKDITKAKPRRRAPWK*
Ga0079217_1016858313300006876Agricultural SoilLMPHLYKRPANHWKTPPRFERRESEQEEEESRPLRKRGKPRSLKDITKAKPRRRAPWK*
Ga0079216_1014883423300006918Agricultural SoilMPHLYKRPANHWKTPTRFERRETEQEEESQPLRKTGTPRSLKDITKAKPRKAPWK*
Ga0079218_1061706833300007004Agricultural SoilMPHLYKRAANHWKTPTRFDRRETEQEEESQPLRKTGRPRSLKDITKAKPRRAPWK*
Ga0105679_1022622913300007790SoilMPHLYKRPANHWKRPTRFERRETDQEEEDSQPLRKSGTPRSLKDITKPRRAPWK*
Ga0126307_1002341343300009789Serpentine SoilMPQLYKRPANHWKTLPRFERRESEQEEESQPLRKTGTPRSLKDITKAKPRRAPWK*
Ga0126307_1003325573300009789Serpentine SoilMAHLYKRPGNHWKTPTRFDHRETEQEEESQALRKSGRPRSLKDITKAKPRRRAPWK*
Ga0126307_1008333643300009789Serpentine SoilMPHLYKRAGNHWKTPTRFDRRESEQEEESQPLRKSGTPRSLKDIIKAKPKGAPWK*
Ga0126307_1021674433300009789Serpentine SoilMPHLYKRPGNHWKTPTRFDRRETEQEESQPLRKTGTPQSLKDITKAKPRRAPWK*
Ga0126307_1022097253300009789Serpentine SoilMPLYKRPGNHWKRSPRFERRESEQEEEESQPLRRTGASRSLKDIIKAKPRR
Ga0126307_1091390223300009789Serpentine SoilMPHLYKRPANHWKRPPRFDRRETDQEEEESQPLRKTGTPRSLKDITKAKPRRAPWK*
Ga0126307_1125949113300009789Serpentine SoilMPHLYKRAANHWKRPPRFDRRESEQEEEESQPLQRTGASRSLKDIIKAKPRRAPWK*
Ga0126307_1133337313300009789Serpentine SoilMAHLYKRRANHWKTPPRFERRETELEEEESQHLRKTERPRSLKDITKAKPRRRAPWK*
Ga0126307_1144854413300009789Serpentine SoilMPHLYKRPGNHWKTPTRFDLRESEQEEEESQPLQRTGTPRSLKDIIKAKPRRAPWK*
Ga0126307_1176869923300009789Serpentine SoilMPHLYKRPGNHWRRPPRFERRESEQEEESQPLQRTGRPRSLKDISKAKPRRRAPWK
Ga0126313_1001783013300009840Serpentine SoilMIYKRAANHWKTPPRFEESRQTDQGEESQPLRRKSGRPRSLKDIVKAKSRRRAPWK*
Ga0126313_1016094323300009840Serpentine SoilMIYKRAANHWKTPTRFERRETDQGEESQPLRRKSGRVRSLKEITKAKPRRRVPWK*
Ga0126313_1017424033300009840Serpentine SoilMIYKRAANHWKRPPRFERRQTDQEEEDSQPLRRKSGRLRSLKDIVKAKSRRAPWK*
Ga0126313_1058635423300009840Serpentine SoilMIYKRAANHWKTPSRFERRQSEQEEESQLLRKSGRPRSLKDIVKAKPRRRANWK*
Ga0126313_1099186023300009840Serpentine SoilMPHLYRRPANHWKRPPRLERRQSEPEEESQALRKRGTPRSLKDIIKAKPRRRAPWK*
Ga0126313_1105542823300009840Serpentine SoilMSENLAEQVMRPSCAHLDKRPGNHWKRPPRFEGRESEQEEGSQPLRKTGRPRSLKDITKAKPRRRAPWK*
Ga0126313_1157828333300009840Serpentine SoilMAHLYKKRAANHWKRPPRFERRESEQEEESQPLRKSGTPRSLKDITKAKPRRRSPWK*
Ga0126313_1171357323300009840Serpentine SoilMPHLYRRPGNHWKTPTRFERRESEQEEESQPLRKSGTPRSLKDIIKAKPRRAPWT*
Ga0126305_1000345313300010036Serpentine SoilMPQLYKRPANHWKTPPRFERRESEQEEESQPLRKTGTPRSLKDITKAKPRRAPWK*
Ga0126305_1005306953300010036Serpentine SoilMPHLYKRSGNHWKKPTRFERRESEQEEESQPLRKSGTSRSLKDIIKAKPRRAPWK*
Ga0126305_1010722143300010036Serpentine SoilMAHLYKRPANHWKTPTRFERRESEQEEEESQPLRKSGRPRSLKDIIKAKPRRRAPWK*
Ga0126305_1025938253300010036Serpentine SoilMPHFYKRPANHWKTPPRFERRQTDQEEESRPLRKRGTPRSLKDIIKAKP
Ga0126305_1079120413300010036Serpentine SoilMIYKRAANHWKRPPRFERRQTEQEEEESQPLGRKSGRVRSLKDIIKVKPRRRAPWK*
Ga0126305_1118189133300010036Serpentine SoilMAHLYKRAANHWKRPPRFEGRESEQEEESQPLQRTGASRSLKDIIKAKPRKRAPWK*
Ga0126304_1032167743300010037Serpentine SoilMTHLYKRAGNHWKRPARFESRETEQEEESQPLRKTGTPRSLKDITKAKPRRRALWK*
Ga0126304_1033135343300010037Serpentine SoilMPRHYKRPGNHWKAPHRFDREETEQEESQPPWKTGTPRSLKDIIKARSAPWK*
Ga0126304_1121421633300010037Serpentine SoilMAHLYKRRANHWKTPPRFERRESEQEEDSQPLRKSGRPRSLKDITKAKSR
Ga0126315_1000378443300010038Serpentine SoilMAHLYKRAANHWKTPTRFERRETEQEEEESQPLRKTGRPRSLKDIIKAKPRRRAPWK*
Ga0126315_1003979543300010038Serpentine SoilMPHLYKRPANHWKRPPRFERRETDQEEEESQPLRRKSGRPRSLKDITKAKPRRRAPWK*
Ga0126315_1015540513300010038Serpentine SoilYKRAANHWKTPPRFEESRQTDQGEESQPLRRKSGRPRSLKDIVKAKSRRRAPWK*
Ga0126315_1015724643300010038Serpentine SoilMAHLYKRAANHWKRPPRFEGRESEQEEESQPLQRTGASRSLKDIIKAKPR
Ga0126315_1020605613300010038Serpentine SoilMPHLYKRAGNHWKRPPRFERRQSEQEEEDSQPLRRKSGRTRSLKDITKAK
Ga0126315_1050813623300010038Serpentine SoilMIYKRAGNHWKTPTRFERRETDQGEEESQPLRRKTGRVRSLKDITKAKPRRRAPWK*
Ga0126315_1082042133300010038Serpentine SoilMIYKRAGNHWKTPPRFERRETDQGEESRPLRRKTGRVRSLKDITRAKPKR
Ga0126315_1096675823300010038Serpentine SoilMPQLYKRAANHWKTPPRFDRRETEQEESQPLRKTERPRSFKDIIKAKPRRAPWR*
Ga0126315_1123519713300010038Serpentine SoilLDRRKVEVEIIYKRAGNHWKTPPRFERRETDQGEEESQPLRKSGRPRSLKDIVKAKSRRRAPWK*
Ga0126309_1019315623300010039Serpentine SoilMPHLYKRPANHWKRPRQFERRESEQEEEEPQPLRKTGRPRTLKDITKAKSRRRAPWK*
Ga0126308_1005566353300010040Serpentine SoilMAHLYKKRPANHWKRPPRFEGRESEQEVESQPLQRTGASRSLKDIIKAKPRRRAPWK*
Ga0126308_1018615643300010040Serpentine SoilMAHLYKRPANHWKRPTRYDRRETEQEEEESQPLRRIRRPRSLKDIIKAKPRRRAPWK*
Ga0126308_1028028223300010040Serpentine SoilMPHLYKRAGNHWKTPTRFERRESEQEEEESQPLRKTGRPRSLKDIIKAKPRRAPWK*
Ga0126308_1044039613300010040Serpentine SoilMPHLYKRADNHWKRPPRFERRQSEQEEEDSQPLRRKSGRTRSLKDITKAKTRKRAPWK*
Ga0126308_1056529813300010040Serpentine SoilMPHLYKRPTNHWKRPTRFESRETDQEEEESQPLCRKRWRPRSLKDITKAKPRRKAPWK*
Ga0126312_1042275643300010041Serpentine SoilMIYKRAANHWKTPPRFESRQTDQEEEESQPLRRKTERPRSLKDITKVKPRRRAPWK*
Ga0126312_1052861213300010041Serpentine SoilAIGGLLMHLYKRPGNHWKRPLRFDRRETEQEEEESQTLRRTGASRSLKDIIKAKPRRAPWK*
Ga0126312_1097684723300010041Serpentine SoilMPHLYKRPANHWKRPTRFDRRESEQEEEESQPLRKRGRPRSLKDITKAKPRRAPWK*
Ga0126312_1129121223300010041Serpentine SoilMIYKRAANHWKRPPRFEPRQTEKEEEESQPLRRKTGRPRSLKDITKAKPRRRAPWK*
Ga0126314_1016147613300010042Serpentine SoilMIYKRAANHWKTPTRFERRETDQGEESQPLRRKSGRVRSLKEITK
Ga0126314_1111227023300010042Serpentine SoilMPHFYKRPGNHWKTPPRFERRQTDQEEEEESQPLRRKTGRPRSLKDITKAKPRRRAPWK*
Ga0126310_1000733833300010044Serpentine SoilMIYKRAANHWKTPTRFERRETDQEEEESQPLRRKSGRVRSLKEITKAKPRRRALWK*
Ga0126310_1036532623300010044Serpentine SoilMAHLYKRAANHWKRPTRFDRRESEQEEEESQPLRKSGRPRSLKDITKAKPRRRAPWK*
Ga0126310_1061772523300010044Serpentine SoilMIYKRAGNHWKTPNRFERRQTEQEEESQPLRKTGRPRSLKDITKAKPRRRAPWK*
Ga0126311_1002980453300010045Serpentine SoilMPHLYKRPGNHWKTPRRFDRRETEQEEESQPRRKTGRPRSLKDIIKAKPRRAPWK*
Ga0126311_1023713243300010045Serpentine SoilMPLYKRPDNHWNRPPRFDRRESDQEEEESQPLRRSGRPRSLKDIIKAKPRRR
Ga0126311_1024809133300010045Serpentine SoilMPHLYKRAANHWKTPTRFERRETEQEEESQPLRKTGTPRSLKDIVKAKSRRRAPWK*
Ga0126311_1081570613300010045Serpentine SoilMPHLYKRAGNHWKRPPRFERRQSEQEEEDSQPLRRKSGRTRSLKDITKAKTRKRAPWK*
Ga0126311_1093051923300010045Serpentine SoilMIYKRAGNHWKTPTRFERRQTDQEEEESQPLRKSGRPRSLKDITKAKTRRRAPWK*
Ga0126311_1152441813300010045Serpentine SoilMPHFYKRAGNHWKTPARFERRETEQEEESQPLRKTGRHRSLKDITKAKPRRRAPWK*
Ga0126306_1000498793300010166Serpentine SoilMPHLYKRPGNHWKTPRRFDRGETEQEESQPPWKTGTPRSLMDIIKAKPRRAPWK*
Ga0126306_1005928223300010166Serpentine SoilMPHLYKRPANHWKTPTRFERRETEQEEESQPLRKIGRPRSLKDIIKAKPRGAPWK*
Ga0126306_1087765923300010166Serpentine SoilMPLYKRAANHWKTSARFERRESEQEESEPLRKSGRPRSLKDIIKAKTKAKTRRRAPWK*
Ga0058701_1068336013300010395AgaveMIYKRAANHWKTRTRFERRQTEQEEESQPLRKTGTPRSLKDITKAKPRRRAPLK*
Ga0182000_1000183383300014487SoilMHLYKRPGNHWRTPPPFERRQTEKEENSQPLRKTGRPRSLKDITKAKMRRRAPWK*
Ga0182000_1002398743300014487SoilMAHLYKRPANHWKTPTRFERRETEQEEEESQPLRRIRRPRSLKDI
Ga0182000_1048642213300014487SoilMIYKRAANHWKRPPRFESRQTDQEEEEESQPLRRKTGRPRSLKEITKAKSRRRSPWK*
Ga0182000_1055938513300014487SoilMIYKRAANHWKRPTRFDRTECEQEEEESQPLRRKSGRVRSLKDITKVKPRRRAPWK*
Ga0182001_1040222423300014488SoilMIYKRAANHWKRPTRFDRTECEQEEEESQPLRRKSGRPRSLKDITKAKTRRAPWK*
Ga0182001_1060957113300014488SoilMIYKTAGNHWNRPPRFDRRETEQEEEESQPLWRTGASRSLKDIIKAKPRRAPWK*
Ga0182001_1068164833300014488SoilMIYKRAANHWKTPPRFERREIEQEEESQPLRRKSGRPRSLKDITKAKT
Ga0190275_1132635523300018432SoilMPHLYKRAANHWKTPTRFERRESEQEEESQPLQRTGRPRSLKDIIKAKPRRAPWK
Ga0190275_1194535113300018432SoilGVLMPHLYKRPANHWKTPTRFERRESEQEEESQPLRKTGRPRSLKDITKAKPSLAWPWK
Ga0190269_1054983933300018465SoilMAHLYKRPGNHWKTPTRFDRRESEQEEESQPLRKTGRPRFLKDITKVKPRRAPWK
Ga0190268_1035367233300018466SoilMAHLYKRPGNHWKTPTRFDRRESEQEEESQPLRKTGRPRSLKDITKAKPKRRAPWK
Ga0190270_1069039623300018469SoilMPHLYKRADWKTPRRFDRRETEQEEESQPLRKTERPRSLKDITKAKPRRAPWK
Ga0190264_1044620433300019377SoilAIGGLLMPHLYKRPGNHWRTPPRFDRRETEQEEESQPLRKTGTSRSLKDIIKAKPRRAPW
Ga0190264_1068951923300019377SoilMIYKRAANHWKTPTRFERRETDQGEEESQPLRRKTGRVRSLKDIIKAKPRRAPWK
Ga0190264_1116948013300019377SoilYKRAGNHWKRPNRFERRESEQEEESQPLRKTGTPRSLKEITKAKRRRRALWK
Ga0196962_1000986113300024430SoilRKVEVEMIYKRAGNHWKRPPRFDRRQTDQEEESQPLWETGRPQCLKDIVKAKPRRRAPWK
Ga0196962_1028171933300024430SoilMPHHYKRPGNHWKRPPRFERRESEQEEEESQPLRRTGDSRSLKDIIKAKPRRRAPWK
Ga0268259_1012277413300030499AgaveVEVEMIYKRAANHWKRPTRFESRETDQGEESQPLRRKSGRVRSLKDITKAKPRRRALWK
Ga0268243_110511933300030510SoilMHLYKRPGNHWRTPPPFERRQTEKEENSQPLRKTGRPRSLKDITKAKMRRRAPWK
Ga0268253_1038279213300030514AgaveIGGLLMPHLYKRAANHWKRPPRFERRQSEQEEDSQPLRRKSGRPRSLKDITKAKPRRRAPWK
Ga0307413_1137702413300031824RhizosphereMPHLYKRPANHWKTPTRFERRESEQEEESQPLRKTGRPRSLKDITKAKPRRAPWR
Ga0307410_1035719823300031852RhizosphereMSLYKRPGNHWKRPPRFDRREPEQEESQPLQKTGTPRSLKDIIKAKPKRAPWK
Ga0307406_1200269713300031901RhizosphereMIYKRAGNHWKRPTRFERRQTDQEEEESQPLRKSGRPRSLKDITKAKPRRRAPWK
Ga0307407_1061780823300031903RhizosphereMPLYKRTANHWKTPRRFERRESEQEESQPLQRTGASRSLKDIIKAKPRRAPWK
Ga0307409_10134155923300031995RhizosphereMHLYKRPGNHWKRPLRFDRRETEQEEEESQPLRRTGASRSLKDIIKAKPRRAPWK
Ga0307416_10021882323300032002RhizosphereMPHLYKRPANHWKRPPRFERRESEQEEESQPLRKIGTPRSLKDIIKAKPRRAPWK
Ga0307414_1157059113300032004RhizosphereMPLYKRTANHWKTPRRFERRESEQEEESQPLRRTGRPRSLKDIIKAKPR
Ga0307414_1193967723300032004RhizosphereMIYKRAANDSKRPPRFERTESEQEEEAQPLRKSGTPRSLKDITKAKPRRRAPWK
Ga0268251_1000516573300032159AgaveMPHLYKRPGNHWKTPTRFDRRETEQEESQPLRKTGTPRSLKDITKAKPRRAPWK
Ga0268251_1007611533300032159AgaveMIYKRAANHWKRPTRFDRTECEQEEEESQPLRRKSGRPRSLKDITKAKPRRRAPWK
Ga0268251_1008810913300032159AgaveVLMPHLYKRPGNHWKAPTRFDRRETEQEEESQPLRKTGRPRSLKDIIKAKPRRAPWK
Ga0268251_1021994833300032159AgaveMPHLYKRPGNHWKAPTRFERRETEQEEESQPLRKTGRPWSLKDIIK
Ga0268251_1028057223300032159AgaveMPHLYKRPGNYWKTPTRFERRETEQEEESQPLRKTGRPWSLKDIIKAKPRRAPWK


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