Metagenome / Metatranscriptome Family F090322

Basic Information
Family ID	F090322
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	58 residues
Representative Sequence	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLQVD
Number of Associated Samples	102
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	2.78 %
% of genes from short scaffolds (< 2000 bps)	1.85 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (21.296 % of family members)
Environment Ontology (ENVO)	Unclassified (68.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.519 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1GOS2221_10221531 2FS896DNA_102095971 3Ga0066222_10164231 4Ga0066223_13474042 5Ga0068515_1068333 6Ga0073579_16930073 7Ga0066840_100633222 8Ga0076924_10026371 9Ga0075461_102624321 10Ga0098038_11784441 11Ga0098054_11308711 12Ga0098054_12811982 13Ga0098054_13730062 14Ga0098055_10181924 15Ga0075477_101947942 16Ga0075475_100609381 17Ga0070750_102012012 18Ga0070746_101913713 19Ga0075468_102304441 20Ga0075460_100797341 21Ga0101452_1034071 22Ga0099851_11241393 23Ga0099847_11611941 24Ga0102821_10158354 25Ga0070751_13027182 26Ga0102825_11259012 27Ga0110931_12121511 28Ga0105747_11170621 29Ga0075480_103956972 30Ga0098052_13102831 31Ga0102960_11985911 32Ga0102963_12435852 33Ga0115566_102171663 34Ga0115549_12554191 35Ga0114932_101951381 36Ga0115571_13379942 37Ga0115568_101695471 38Ga0098049_10101341 39Ga0098049_11865751 40Ga0129342_11325163 41Ga0151665_10553862 42Ga0129344_10538581 43Ga0129327_101182441 44Ga0182042_13100851 45Ga0182092_12635423 46Ga0182049_12839212 47Ga0180120_102348051 48Ga0181369_11033242 49Ga0181387_10614181 50Ga0181391_11235831 51Ga0181412_10819302 52Ga0181401_10156351 53Ga0181416_11017091 54Ga0181399_11394622 55Ga0181399_11394912 56Ga0181389_10038031 57Ga0181411_10516263 58Ga0181414_10639871 59Ga0181406_11953762 60Ga0181423_12964261 61Ga0181380_11298081 62Ga0181572_104276312 63Ga0181553_102927471 64Ga0181591_110711131 65Ga0181575_104381761 66Ga0206128_11885311 67Ga0181602_101133343 68Ga0206130_103273702 69Ga0211658_10311741 70Ga0211528_103478751 71Ga0211518_101709131 72Ga0181598_11264971 73Ga0213869_102530411 74Ga0213861_102836552 75Ga0213868_106962461 76Ga0222718_105322641 77Ga0222715_102299481 78Ga0224897_1018001 79Ga0212024_10385671 80Ga0212028_10604381 81Ga0196887_10547931 82Ga0196899_11297341 83Ga0255752_102820361 84Ga0255752_104371642 85Ga0244775_101321471 86Ga0244776_108336032 87Ga0208667_10301681 88Ga0208792_10398913 89Ga0208792_10623071 90Ga0208666_11470731 91Ga0208793_10142811 92Ga0208790_11999721 93Ga0209535_11743351 94Ga0209232_10519703 95Ga0209336_101348482 96Ga0209634_10893451 97Ga0209645_12035801 98Ga0208030_10349543 99Ga0208795_10735301 100Ga0208899_10788031 101Ga0208127_10644903 102Ga0208798_10456091 103Ga0209383_10330121 104Ga0209071_10590973 105Ga0256382_10242511 106Ga0307488_103803583 107Ga0310343_105087783 108Ga0348336_024604_1_147
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1GOS2221_10221531 2FS896DNA_102095971 3Ga0066223_13474042 4Ga0066840_100633222 5Ga0098038_11784441 6Ga0099851_11241393 7Ga0110931_12121511 8Ga0181369_11033242 9Ga0181401_10156351 10Ga0211518_101709131 11Ga0208667_10301681 12Ga0208030_10349543 13Ga0209383_10330121
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0099847_11611941 2FS896DNA_102095971 3Ga0066223_13474042 4Ga0066840_100633222 5Ga0098038_11784441 6Ga0115566_102171663 7Ga0098049_11865751 8Ga0181401_10156351 9Ga0181591_110711131 10Ga0206128_11885311 11Ga0211528_103478751 12Ga0211518_101709131 13Ga0181598_11264971 14Ga0212024_10385671 15Ga0255752_102820361 16Ga0209336_101348482 17Ga0209634_10893451 18Ga0209645_12035801 19Ga0208030_10349543 20Ga0208899_10788031 21Ga0209383_10330121 22Ga0209071_10590973 23Ga0256382_10242511
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.93% β-sheet: 13.95% Coil/Unstructured: 65.12%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF09718	Tape_meas_lam_C	12.96
PF09931	DUF2163	1.85
PF05065	Phage_capsid	0.93
PF06199	Phage_tail_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300006735\|Ga0098038_1178444	Not Available	696	Open in IMG/M
3300007280\|Ga0101452_103407	Not Available	14022	Open in IMG/M
3300016736\|Ga0182049_1283921	Not Available	586	Open in IMG/M
3300017746\|Ga0181389_1003803	Not Available	5501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.15%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.85%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.70%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%
Oceanic	Environmental → Aquatic → Marine → Oceanic	24.07%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.48%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.85%
Strait	Environmental → Aquatic → Marine → Strait	12.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.33%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%

Habitat	Taxonomy	Distribution
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	10.19%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	28.70%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	24.07%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	12.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	17.59%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.70%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.30%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.63%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.93%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.93%
Marine Water	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.70%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.85%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	10.19%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	12.96%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.78%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.78%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.93%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300003540	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNA	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300004829	Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 102 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2221_10221531	3300001938	Marine	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEA
FS896DNA_102095971	3300003540	Diffuse Hydrothermal Flow Volcanic Vent	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDFYTNVVFDSNTYEAGGSFLAVDATAETGQ
Ga0066222_10164231	3300004460	Marine	MPRSLSTDLQTQVSSTATKTAYLVELNLSSTIRLTDWYTNVTYDSNSYEAGGS
Ga0066223_13474042	3300004461	Marine	MPRSLSSALQAQVSATSTKTAFLVELELSTTIRLTDWYSNVTYDSNTYEAGGSFLSV
Ga0068515_1068333	3300004829	Marine Water	MPRSLSAALQTQVSSTATQTAFLVELNLSSTIRLTDWYSNVTYDSNSYE
Ga0073579_16930073	3300005239	Marine	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFFIS*
Ga0066840_100633222	3300005608	Marine	MPRSLSAGLQTEVSSKATKIAFLIELNLSSVIRLTDWYSNVVYDSNTYEAGGSFLSVDTV
Ga0076924_10026371	3300005747	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYE
Ga0075461_102624321	3300006637	Aqueous	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEAGGSFLTVDSIIETGQLEVN
Ga0098038_11784441	3300006735	Marine	MPRSLSATLQTQVSSTATKTAFLVELNLSSTIRLTNWYADVTYDSNAYEAGGSFLTIDATTETGQLQVNEIN
Ga0098054_11308711	3300006789	Marine	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYADVTYDSNSYEAGGSFLSV
Ga0098054_12811982	3300006789	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAG
Ga0098054_13730062	3300006789	Marine	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYNSNSYEAGGSFLSIDSTTETGQ
Ga0098055_10181924	3300006793	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSY
Ga0075477_101947942	3300006869	Aqueous	MPRSLSTALQNQVSATATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLTVDSTTET
Ga0075475_100609381	3300006874	Aqueous	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGS
Ga0070750_102012012	3300006916	Aqueous	MPRSLSAGLQTQVSAQQTKTAFLVELNLSTVIRLTDFYRNVSYDSNSYEAGGSFLAVDTTTETGQLQVNDI
Ga0070746_101913713	3300006919	Aqueous	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSFL
Ga0075468_102304441	3300007229	Aqueous	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSF
Ga0075460_100797341	3300007234	Aqueous	MPRSLSAALQTQVSSTATKTAFLVELNLSSIIRLTDWYSDVTYDSNNYEA
Ga0101452_1034071	3300007280	Marine Surface Water	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSFLTVDS
Ga0099851_11241393	3300007538	Aqueous	MPRSLSTDLQTQVSAQQTKIAFLVELNLSTVIRLTDFYRDVTYNSESYEAGGSF
Ga0099847_11611941	3300007540	Aqueous	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLQVD
Ga0102821_10158354	3300007557	Estuarine	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLTVEATTETGQ
Ga0070751_13027182	3300007640	Aqueous	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLEVNSTTETGQLEVNEI
Ga0102825_11259012	3300007655	Estuarine	MPRSLSTAIQTQISSTATKTAFLVELNLSTTIRLTDWYSNVTYDSNSYEAG
Ga0110931_12121511	3300007963	Marine	MGRSLSTALQTQVSAEANKIAFLVELNLSTVIRATDFYTDITYNSETYQAGGSYLAVDTTQETGELK
Ga0105747_11170621	3300007974	Estuary Water	MPRSLSTALQTQVSAQQTKTAFLVELNLSTVIRLTDFYRNVSYDSNSYEAGGSF
Ga0075480_103956972	3300008012	Aqueous	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLTVDSTTET
Ga0098052_13102831	3300008050	Marine	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLTVDSTTETGQLQV
Ga0102960_11985911	3300009000	Pond Water	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDANLYEAGGSF
Ga0102963_12435852	3300009001	Pond Water	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYTNVTYDSNSYEAGGSFLQVDATTETGQLQVDE
Ga0115566_102171663	3300009071	Pelagic Marine	MPRSLSTALQSQVSATATKTAFLVELNLSTVIRLTDWYTNVSYDSNSYEAGGSFLTVD
Ga0115549_12554191	3300009074	Pelagic Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVSYDSNTYEAGGSFLTVDAT
Ga0114932_101951381	3300009481	Deep Subsurface	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDYYTNVIYDSNTYEAGGSFLTVDASTET
Ga0115571_13379942	3300009495	Pelagic Marine	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEAGGSFLQVDSTTETGQLEVDEI
Ga0115568_101695471	3300009498	Pelagic Marine	VPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEAGGSFLS
Ga0098049_10101341	3300010149	Marine	MPRSLSAGLQTQVSAQQTKTAFLVELNLSTVIRLTDFYRDVTYDSNSY
Ga0098049_11865751	3300010149	Marine	MPRSLSTALQAQVSSTATKTAFLVKLNLTPVIRLTDWYANVTYDATVYEAGGSFLS
Ga0129342_11325163	3300010299	Freshwater To Marine Saline Gradient	MPRSLSSALQTQVSSEATKTAFLVELNLSSTIRLTDWYANVTYDSNSYEAGGSFLSVNTT
Ga0151665_10553862	3300011127	Marine	MPRSLSTALQTQVSSTVTKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEAGGSFLQVDMASETGQL
Ga0129344_10538581	3300012520	Aqueous	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLSIDSTTETGQLQVNE
Ga0129327_101182441	3300013010	Freshwater To Marine Saline Gradient	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNNYEAGGSFLTVD
Ga0182042_13100851	3300016733	Salt Marsh	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLQVDATTET
Ga0182092_12635423	3300016734	Salt Marsh	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEA
Ga0182049_12839212	3300016736	Salt Marsh	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFFTG
Ga0180120_102348051	3300017697	Freshwater To Marine Saline Gradient	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSFLEVNSTTETGQLEVN
Ga0181369_11033242	3300017708	Marine	MGRSLSTALQTQVSAEANKIAFLVELNLSTVIRATDFYTDIVYDSENYQAGG
Ga0181387_10614181	3300017709	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLEVNSTTE
Ga0181391_11235831	3300017713	Seawater	MPRSLSTDLQTQVSSTATKTAFLVELNLSTTVRLTDWYSNVTYDSNSYE
Ga0181412_10819302	3300017714	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNNYEAGGSFLTVDSTTET
Ga0181401_10156351	3300017727	Seawater	MPRTLSTALQNQVSADATKIAFLVELQLSTVVRVTDFGRDVVFNSNTYTAGGSFV
Ga0181416_11017091	3300017731	Seawater	MPRSLSTDLQTQVSSTATKTAFLVELNLSSIIRLTDWYSNVTYNSNSYEAGGSF
Ga0181399_11394622	3300017742	Seawater	MPRSLSAGLQAQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYQAG
Ga0181399_11394912	3300017742	Seawater	MPRSLSAGLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYQAG
Ga0181389_10038031	3300017746	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSTTVRLTDWYSNVTYDSNSYEAGVSFLQ
Ga0181411_10516263	3300017755	Seawater	MGRSLSTALQAQVSAEANKIAFLVELNLSTVIRATDFYTDITYNSETYQAGGSYLTVDTTQETGELKVDEIN
Ga0181414_10639871	3300017759	Seawater	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSDITYDSNSYEAGGSFLSVDAIMETG
Ga0181406_11953762	3300017767	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNNYEAGGSFLTVDST
Ga0181423_12964261	3300017781	Seawater	MGRSLSTALQAQVSAEANKIAFLVELNLSTIIRATDFYTDIVYDSENYQAGGSYLAVDT
Ga0181380_11298081	3300017782	Seawater	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVIYNSNSYEAGGSFL
Ga0181572_104276312	3300018049	Salt Marsh	MPRSLSAGLQTQVSSTATKTAFLVELNLSSTIRLTDWYTNVSYDSNSYEAGGSFLSVDSITETGQLQVDEI
Ga0181553_102927471	3300018416	Salt Marsh	MPRSLSSALQTQVSAEATKTAFLVELNLSSTIRLTDWYTNVTYDSNSYEAGGSF
Ga0181591_110711131	3300018424	Salt Marsh	MPRSLSTDLQTQVSAQQTKIAFLVELNLSTVIRLTDFYRDVTYNSETYEAGGSYLVVNTTTEAGQLE
Ga0181575_104381761	3300020055	Salt Marsh	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLQVDATTETGQLQVD
Ga0206128_11885311	3300020166	Seawater	MPRTLSTAIQNQISGTATKTAFLVELNLSTTIRLTDWYSNVTYDSNSYEAGGSFLTVD
Ga0181602_101133343	3300020173	Salt Marsh	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNSYEAGGSFLSVDSI
Ga0206130_103273702	3300020187	Seawater	MPRSLSTALQAQVSAQQTKTAFLVELNLSTVIRLTDFYRDVTYDSNSYEAGGSFLAVDT
Ga0211658_10311741	3300020274	Marine	MPRSLSTALQTQVSSSATKTAFLVELNLSSTIRLTDYYTDVVFDSNTYTAGGS
Ga0211528_103478751	3300020417	Marine	MPRSLSSDLQTQVSATATKTAFLVELNLSSTIRLTDWYSNVVYDSNTYE
Ga0211518_101709131	3300020440	Marine	MPRSLSTALQTQVSADATKIAFLVKLSLNSTIRLTDHYTNVIYESEVYEAGGAYLEVDSTTESGKLELNDI
Ga0181598_11264971	3300020810	Salt Marsh	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYSDVTYDSNNYEAGGSFLTVDSTTETGQLQVNE
Ga0213869_102530411	3300021375	Seawater	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVNYDSNSYEAGGSFLQV
Ga0213861_102836552	3300021378	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLTVDSIIET
Ga0213868_106962461	3300021389	Seawater	MPRSLSTALQNQVSATATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYE
Ga0222718_105322641	3300021958	Estuarine Water	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLTVDSTTETGQLQ
Ga0222715_102299481	3300021960	Estuarine Water	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLTVDSTTETGQ
Ga0224897_1018001	3300022046	Seawater	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGGSFLEVNSTTETGQLEVN
Ga0212024_10385671	3300022065	Aqueous	MPRSLSTDLQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSFLTVDSVTETGQLQIDEI
Ga0212028_10604381	3300022071	Aqueous	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLNVDST
Ga0196887_10547931	3300022178	Aqueous	MPRSLSTALQTQVSAQQTKTAFLVELNLSTVIRLTDFYRDVTYDSNSYEAGGSFLAVDT
Ga0196899_11297341	3300022187	Aqueous	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSFLNV
Ga0255752_102820361	3300022929	Salt Marsh	MPRSLSAGLQTQVSADATKIAFLVELNLSTTIRLTDYYRNVTYDANLYEAGGSFLQVA
Ga0255752_104371642	3300022929	Salt Marsh	MPRSLSSALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSY
Ga0244775_101321471	3300024346	Estuarine	MPRSLSTAIQTQISSTATKTAFLVELNLSTTIRLTDWYSNVTYDSNSYEAGGSFLSVDGTTETG
Ga0244776_108336032	3300024348	Estuarine	MPRTLSTDLETQVSSQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGG
Ga0208667_10301681	3300025070	Marine	MPRSLSTDLQTQVSAAETKTAFLVELGLSTTIRLTDWYSDVTYDSNSYEAGGSFLTVDSVTETGQL
Ga0208792_10398913	3300025085	Marine	VPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGG
Ga0208792_10623071	3300025085	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGSF
Ga0208666_11470731	3300025102	Marine	MPRSLSTALQTQVSSSATKTAFLVELNLSSTIRLTDYYTNVIFDSNTYEAGGSFLSVDPTAETGQLQVDE
Ga0208793_10142811	3300025108	Marine	MPRSLSTALQTQVSAQQTKTAFLVELGLSTTIRLTDWYSDVTYDSNSYQAGGSFLTVASTIET
Ga0208790_11999721	3300025118	Marine	MPRSLSAALQTQVSSTATKTAFLVELNLSSTIRLTDWYADVTYDSNSYEAGGSFLSVDSIIE
Ga0209535_11743351	3300025120	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEAGGS
Ga0209232_10519703	3300025132	Marine	MPRSLSAGLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYEA
Ga0209336_101348482	3300025137	Marine	MGRSLSTALQAQVSAEANKIAFLVELNLSTIIRATDFYTNITYNSESYEAG
Ga0209634_10893451	3300025138	Marine	MPRSLSTAMQAQVSSPSTKTAFLVELDLSTTIRLTDWYANVIFESNSYEAGGSFLS
Ga0209645_12035801	3300025151	Marine	MPRSLSTALQTQISSSATKTAYLVELNLSSTIRLTNWYTNVSYDSNAYEAGGSF
Ga0208030_10349543	3300025282	Deep Ocean	MPRSLSTALQTQVSADATKIAFLVELNLSTVIRLTDYYRNLIFDSESYEAGGAFLEVDN
Ga0208795_10735301	3300025655	Aqueous	MPRSLSAALQTQVSSTATKTAFLVELNLSTVIRLTDWYSDVTYDSNNYEAGGS
Ga0208899_10788031	3300025759	Aqueous	MPRSLSAGLQTQVSAQQTKTAFLVELNLSTVIRLTDFYRNVSYDSNSYEAGGSFLAVDTTTETGQLQVN
Ga0208127_10644903	3300026201	Marine	MPRSLSTALQTQVSSTATKTAFLVELNLSSTIRLTDWYSDVTYDSNNYEAGGSFLSVA
Ga0208798_10456091	3300027183	Estuarine	MPRSLSTAIQTQISSTATKTAFLVELNLSTTIRLTDWYSNVTYDSNSYEA
Ga0209383_10330121	3300027672	Marine	MPRTLSSALQTQVSLPAIKTAFLVELQLSTTIRLTSWYSNVTYNSEAYEAGGSFLEVDSITET
Ga0209071_10590973	3300027686	Marine	MPRTLSTALQAQVSAPTTKTAFLVELQLSSTIRLTDWYSNVTFNSEAYEA
Ga0256382_10242511	3300028022	Seawater	MGRSLSTALQTQVSAEANKIAFLVELNLSTVIRATDFYTDITYDSETYQAGGSYLAVDTT
Ga0307488_103803583	3300031519	Sackhole Brine	MPRSLSAAIQNQVSATATKTAFLVELNLSTVIRLTDWYTNVTYDSNSYEAGG
Ga0310343_105087783	3300031785	Seawater	MPRSLSTALQTQVSSTATKTAFLVELNLSSTVRLTDYYIDVVFDSNTYTAG
Ga0348336_024604_1_147	3300034375	Aqueous	MPRSLSTDLQTQVSSTATKTAFLVELNLSSTIRLTDWYSNVTYDSNSYE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences