Metagenome / Metatranscriptome Family F090316

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090316
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	44 residues
Representative Sequence	MPDDLQREEELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Number of Associated Samples	71
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	70.37 %
% of genes near scaffold ends (potentially truncated)	14.81 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (36.111 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (21.296 % of family members)
Environment Ontology (ENVO)	Unclassified (37.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (35.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.79% β-sheet: 0.00% Coil/Unstructured: 37.21%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13385	Laminin_G_3	1.85
PF07460	NUMOD3	0.93
PF06941	NT5C	0.93
PF01327	Pep_deformylase	0.93
PF04851	ResIII	0.93
PF13604	AAA_30	0.93
PF13884	Peptidase_S74	0.93
PF14279	HNH_5	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.93
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.74 %
Unclassified	root	N/A	34.26 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	63.89 %
Unclassified	root	N/A	34.26 %
cellular organisms	root	All Organisms → cellular organisms	1.85 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	27.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	27.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	27.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	27.78 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	10.19 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.63 %
Pseudoalteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
unclassified Kyanoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae	10.19 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.63 %
Pseudoalteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	10.19 %
Nodensvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus	2.78 %
Aurunvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Aurunvirus	0.93 %
Neptunevirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Neptunevirus	0.93 %
Pseudoalteromonas fuliginea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas fuliginea	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.11 %
Unclassified	root	N/A	34.26 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	10.19 %
Synechococcus virus SPM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	2.78 %
Synechococcus virus SRIM50	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Neptunevirus → Synechococcus virus SRIM50	0.93 %
Synechococcus virus STIM5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Aurunvirus → Synechococcus virus STIM5	0.93 %
Pseudoalteromonas fuliginea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas fuliginea	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199881200	Not Available	927	Open in IMG/M
2199352004\|2199908449	All Organisms → Viruses → Predicted Viral	2853	Open in IMG/M
3300000401\|BB_Man_B_Liq_inBBDRAFT_1002444	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	3533	Open in IMG/M
3300001274\|B570J13895_1001945	All Organisms → Viruses → Predicted Viral	2787	Open in IMG/M
3300001580\|Draft_10290781	Not Available	705	Open in IMG/M
3300001970\|GOS2248_10112280	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Neptunevirus → Synechococcus virus SRIM50	839	Open in IMG/M
3300002408\|B570J29032_109522724	Not Available	835	Open in IMG/M
3300002835\|B570J40625_100734482	Not Available	878	Open in IMG/M
3300003430\|JGI25921J50272_10016908	All Organisms → Viruses → Predicted Viral	2030	Open in IMG/M
3300005662\|Ga0078894_10509951	All Organisms → Viruses → Predicted Viral	1079	Open in IMG/M
3300005662\|Ga0078894_11100361	Not Available	678	Open in IMG/M
3300005805\|Ga0079957_1276859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	766	Open in IMG/M
3300006033\|Ga0075012_10312623	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300006639\|Ga0079301_1008398	All Organisms → Viruses → Predicted Viral	3956	Open in IMG/M
3300006639\|Ga0079301_1092583	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	932	Open in IMG/M
3300006641\|Ga0075471_10199877	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300006916\|Ga0070750_10430559	Not Available	547	Open in IMG/M
3300006917\|Ga0075472_10037338	All Organisms → Viruses → Predicted Viral	2277	Open in IMG/M
3300007538\|Ga0099851_1000567	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15464	Open in IMG/M
3300007539\|Ga0099849_1209994	Not Available	729	Open in IMG/M
3300007960\|Ga0099850_1029387	All Organisms → Viruses → Predicted Viral	2405	Open in IMG/M
3300007973\|Ga0105746_1296864	Not Available	560	Open in IMG/M
3300008107\|Ga0114340_1142346	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	896	Open in IMG/M
3300008110\|Ga0114343_1125194	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	855	Open in IMG/M
3300008113\|Ga0114346_1253662	Not Available	651	Open in IMG/M
3300008261\|Ga0114336_1088407	All Organisms → Viruses → Predicted Viral	1484	Open in IMG/M
3300008261\|Ga0114336_1093375	All Organisms → Viruses → Predicted Viral	1430	Open in IMG/M
3300008962\|Ga0104242_1009030	All Organisms → Viruses → Predicted Viral	1770	Open in IMG/M
3300008962\|Ga0104242_1043403	Not Available	762	Open in IMG/M
3300009001\|Ga0102963_1226823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	742	Open in IMG/M
3300009009\|Ga0105105_10227704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	979	Open in IMG/M
3300009124\|Ga0118687_10457068	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	500	Open in IMG/M
3300009169\|Ga0105097_10026862	All Organisms → Viruses → Predicted Viral	3062	Open in IMG/M
3300010354\|Ga0129333_10647488	Not Available	913	Open in IMG/M
3300010354\|Ga0129333_10745004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	839	Open in IMG/M
3300010354\|Ga0129333_10789018	All Organisms → cellular organisms → Archaea → Asgard group	811	Open in IMG/M
3300010354\|Ga0129333_10910586	Not Available	743	Open in IMG/M
3300010354\|Ga0129333_10916570	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	740	Open in IMG/M
3300010354\|Ga0129333_10992962	Not Available	706	Open in IMG/M
3300010354\|Ga0129333_11113946	Not Available	659	Open in IMG/M
3300010354\|Ga0129333_11173636	Not Available	638	Open in IMG/M
3300010354\|Ga0129333_11404509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	574	Open in IMG/M
3300010354\|Ga0129333_11565416	Not Available	539	Open in IMG/M
3300010354\|Ga0129333_11635979	Not Available	525	Open in IMG/M
3300010354\|Ga0129333_11724884	Not Available	509	Open in IMG/M
3300010354\|Ga0129333_11769640	Not Available	501	Open in IMG/M
3300010370\|Ga0129336_10493697	Not Available	660	Open in IMG/M
3300010370\|Ga0129336_10710960	Not Available	532	Open in IMG/M
3300011268\|Ga0151620_1072098	All Organisms → Viruses → Predicted Viral	1112	Open in IMG/M
3300012000\|Ga0119951_1018382	All Organisms → Viruses → Predicted Viral	2569	Open in IMG/M
3300012000\|Ga0119951_1070853	Not Available	911	Open in IMG/M
3300012970\|Ga0129338_1086335	Not Available	529	Open in IMG/M
3300013004\|Ga0164293_10693668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	653	Open in IMG/M
3300013004\|Ga0164293_10762385	Not Available	616	Open in IMG/M
3300013005\|Ga0164292_10392760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas fuliginea	928	Open in IMG/M
3300014819\|Ga0119954_1013877	All Organisms → Viruses → Predicted Viral	1744	Open in IMG/M
3300017766\|Ga0181343_1082560	Not Available	921	Open in IMG/M
3300017766\|Ga0181343_1147652	Not Available	656	Open in IMG/M
3300020574\|Ga0208221_1000007	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Aurunvirus → Synechococcus virus STIM5	47838	Open in IMG/M
3300021961\|Ga0222714_10079500	All Organisms → Viruses → Predicted Viral	2143	Open in IMG/M
3300022200\|Ga0196901_1000312	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	26133	Open in IMG/M
3300022752\|Ga0214917_10015865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6498	Open in IMG/M
3300022752\|Ga0214917_10137976	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300022752\|Ga0214917_10147619	All Organisms → Viruses → Predicted Viral	1250	Open in IMG/M
3300022752\|Ga0214917_10154952	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300024239\|Ga0247724_1000011	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	89329	Open in IMG/M
3300024239\|Ga0247724_1004563	All Organisms → Viruses → Predicted Viral	2183	Open in IMG/M
3300024289\|Ga0255147_1003972	All Organisms → Viruses → Predicted Viral	3436	Open in IMG/M
3300024306\|Ga0255148_1010097	All Organisms → Viruses → Predicted Viral	1900	Open in IMG/M
3300024351\|Ga0255141_1043567	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	664	Open in IMG/M
3300024536\|Ga0256338_1045462	Not Available	998	Open in IMG/M
3300025769\|Ga0208767_1115576	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300026187\|Ga0209929_1166501	Not Available	529	Open in IMG/M
3300027114\|Ga0208009_1032523	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300027467\|Ga0255154_1036057	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
3300027899\|Ga0209668_10341693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	969	Open in IMG/M
3300031857\|Ga0315909_10277428	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300031857\|Ga0315909_10541549	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	793	Open in IMG/M
3300031857\|Ga0315909_10923637	Not Available	536	Open in IMG/M
3300032116\|Ga0315903_10591877	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	854	Open in IMG/M
3300033488\|Ga0316621_10700381	Not Available	732	Open in IMG/M
3300033521\|Ga0316616_102618169	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	678	Open in IMG/M
3300033521\|Ga0316616_104751165	Not Available	511	Open in IMG/M
3300033557\|Ga0316617_100283197	All Organisms → Viruses → Predicted Viral	1390	Open in IMG/M
3300033557\|Ga0316617_102654162	Not Available	521	Open in IMG/M
3300033816\|Ga0334980_0017698	All Organisms → Viruses → Predicted Viral	3069	Open in IMG/M
3300033816\|Ga0334980_0045171	All Organisms → Viruses → Predicted Viral	1869	Open in IMG/M
3300033978\|Ga0334977_0002072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	11667	Open in IMG/M
3300033978\|Ga0334977_0103822	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300033981\|Ga0334982_0030772	All Organisms → Viruses → Predicted Viral	3064	Open in IMG/M
3300033994\|Ga0334996_0095646	All Organisms → Viruses → Predicted Viral	1739	Open in IMG/M
3300033994\|Ga0334996_0219934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	999	Open in IMG/M
3300034021\|Ga0335004_0187344	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300034061\|Ga0334987_0003389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15327	Open in IMG/M
3300034072\|Ga0310127_203627	Not Available	733	Open in IMG/M
3300034073\|Ga0310130_0000643	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	24667	Open in IMG/M
3300034073\|Ga0310130_0005541	All Organisms → Viruses → Predicted Viral	4920	Open in IMG/M
3300034073\|Ga0310130_0012818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	2852	Open in IMG/M
3300034073\|Ga0310130_0073110	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300034073\|Ga0310130_0084947	Not Available	946	Open in IMG/M
3300034073\|Ga0310130_0302695	Not Available	509	Open in IMG/M
3300034102\|Ga0335029_0097526	All Organisms → Viruses → Predicted Viral	2078	Open in IMG/M
3300034104\|Ga0335031_0297416	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300034106\|Ga0335036_0342860	Not Available	978	Open in IMG/M
3300034120\|Ga0335056_0068003	All Organisms → Viruses → Predicted Viral	2269	Open in IMG/M
3300034200\|Ga0335065_0860056	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	503	Open in IMG/M
3300034272\|Ga0335049_0735887	Not Available	592	Open in IMG/M
3300034283\|Ga0335007_0001671	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17246	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	83.33%
Terrestrial	Environmental → Terrestrial	15.74%
Wastewater	Engineered → Wastewater	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.63%
Marine	Environmental → Aquatic → Marine	24.07%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	11.11%
Soil	Environmental → Terrestrial → Soil	4.63%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.70%
Sediment	Environmental → Aquatic → Sediment	0.93%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	31.48%
Coastal	Environmental → Aquatic → Marine → Coastal	23.15%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.11%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	11.11%
River	Environmental → Aquatic → Freshwater → River	4.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.85%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.48%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.15%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.56%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.63%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	21.30%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	13.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.33%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	6.48%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.63%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.63%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.63%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.70%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.85%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.85%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Watersheds	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds	0.93%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	0.93%
Bioluminescent Bay	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Bioluminescent Bay	0.93%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.93%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300000401	Marine microbial community from La Parguera, Puerto Rico - BB Mangrove B Liquid	Environmental	Open in IMG/M
3300001274	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300001580	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6	Engineered	Open in IMG/M
3300001970	Hypersaline microbial communities from Punta Cormorant, Floreana Island, Equador - GS033	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006033	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024239	Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-E	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024306	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024536	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027467	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200063800	2199352004	Freshwater	MPDDLQREEEILLKALKEHKEKKSQEPIVKPQDDTSNILPAVIAAVL
2200090274	2199352004	Freshwater	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPTVIAAVL
BB_Man_B_Liq_inBBDRAFT_10024446	3300000401	Bioluminescent Bay	MTDDLQREEELLFKALEEYKEKKSQEPTDKTTNTLPAVIAAAL*
B570J13895_10019458	3300001274	Freshwater	MPDDLQREEEILLKALKEHKEKKSQEPIVKPQDDTSNILPAVIAAVL*
Draft_102907814	3300001580	Hydrocarbon Resource Environments	MPDDLQREEELLFKTLEEYKEKKSQEPTDKTTNTLPAVIAAAL*
GOS2248_101122802	3300001970	Hypersaline	MPDDLQREEELFFKALEEYKGKKSQEPTDKTTNTDKTTNTLPAVIAAVL*
B570J29032_1095227241	3300002408	Freshwater	MPDDLQREEELFFKALKKYKEKKTQEPTDKTTNILPAVIAAVL*PLQKIGLYIIVLG
B570J40625_1007344823	3300002835	Freshwater	MPDDLQREEELFFKALKKYKEKKTQEPTDKTTNILPAVIAAVL*
JGI25921J50272_100169084	3300003430	Freshwater Lake	MPDDLQREEELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0078894_105099512	3300005662	Freshwater Lake	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAIL*
Ga0078894_111003612	3300005662	Freshwater Lake	MPDDLQREEELLLKALKEHKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0079957_12768593	3300005805	Lake	MPDDLQIEEEIFLKALEEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0075012_103126236	3300006033	Watersheds	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0079301_10083981	3300006639	Deep Subsurface	MPDDLQREEELFFKALKEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0079301_10925834	3300006639	Deep Subsurface	MPDDLQREEEIFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL*
Ga0075471_101998775	3300006641	Aqueous	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPTVIAAVL*
Ga0070750_104305591	3300006916	Aqueous	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAAL*
Ga0075472_100373382	3300006917	Aqueous	MPDDLQREEELFFKALEEYKKKKSQEPTDKTTNTLPTVIAAVL*
Ga0099851_100056742	3300007538	Aqueous	MPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAAL*
Ga0099849_12099942	3300007539	Aqueous	MPDDLQQEEELFFKALEEYKEKKSQEPTNKTTNTLPAVIAAAL*
Ga0099850_10293871	3300007960	Aqueous	EELLFKALKEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0105746_12968641	3300007973	Estuary Water	MPYNTLIHKRQMPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0114340_11423464	3300008107	Freshwater, Plankton	MPDDLQIEEEIFLKALEEYKEKKSQEPKDKITNTLPAVIAAVL*
Ga0114343_11251944	3300008110	Freshwater, Plankton	MPDDLQREEEIFLKALEEYKEKKSQEPKDKITNTLPAVIAAVL*
Ga0114346_12536623	3300008113	Freshwater, Plankton	MPDDLQKEEELLLKALKEHKEKKSQEPIVKPQDDTSNILPAVIAAVL*
Ga0114336_10884075	3300008261	Freshwater, Plankton	MPDDLQKEEELLFKALKEHKEKKSQEPIVKPQDDTSNILPAVIAAVL*
Ga0114336_10933754	3300008261	Freshwater, Plankton	MPDDLQREEEIFLKALEEYKEKKSQEPTDKTTNTLPAVIAAAL*
Ga0104242_10090302	3300008962	Freshwater	MPDDLQREELFFKALKEYKEKKSQEPQDKTTNTLPAVIATVL*
Ga0104242_10434031	3300008962	Freshwater	EIFLKALKEHKEKKTQEPTDKTTNTLPAVIAAVL*
Ga0102963_12268233	3300009001	Pond Water	MPDDLQREEELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAAL*
Ga0105105_102277043	3300009009	Freshwater Sediment	MPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAVL*
Ga0118687_104570682	3300009124	Sediment	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAATL*
Ga0105097_100268624	3300009169	Freshwater Sediment	MPDDLQREEEIFLKALEEHKEKKSQEPKDKTTNTLPAVIAAVL*
Ga0129333_106474885	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEILLKALKEHKEKKSQEPIVKPQDDTSNILPAIIAAVL*
Ga0129333_107450042	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEELFLKALEEYKEKKSQEPKDKTTNTLPAVIAAVL*
Ga0129333_107890183	3300010354	Freshwater To Marine Saline Gradient	MPDDLQEEEQIFLKALKEHKEKKSQEPIVKPQDDTSNILPAIIAATL*
Ga0129333_109105863	3300010354	Freshwater To Marine Saline Gradient	MPDDLQKEEELLFKALEVHKEKKSQEPKDKTTNSLPAVIAAVL*
Ga0129333_109165703	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEIFLKALEEYVEKKSQEPKDKTPNTLPAVIASVL*
Ga0129333_109929622	3300010354	Freshwater To Marine Saline Gradient	MSDDLQREEELFLKALEEYKEKKSQEPQDKTTNTLPSVIAAVL*
Ga0129333_111139461	3300010354	Freshwater To Marine Saline Gradient	MPDDLQKEEELLFKALEEYKEKKSQEPIVKPQDDTSNIL
Ga0129333_111736362	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEIFLKTLKEYKEKKTQEPTDKTTNTLPAVIAAVL*
Ga0129333_114045093	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEELFLKALEEYKEKKSQEPQDKTINTLPAVIAAVL*
Ga0129333_115654162	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEIFLKALQEYKEKKSQEPTDKITNTLPAVIAAVL*
Ga0129333_116359792	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEIFLKALEEHKEKKSQEPKDKTTNTLPAVIAAAL*
Ga0129333_117248842	3300010354	Freshwater To Marine Saline Gradient	MPDDLQREEEIFLKALKEHKEKKTQEPKDKTTNTLPAVIAAVL*
Ga0129333_117696402	3300010354	Freshwater To Marine Saline Gradient	MPDDLHEEEQIFLKALKEHKDKKSQEPIVKPQDDTSNILPAIIAATL*
Ga0129336_104936974	3300010370	Freshwater To Marine Saline Gradient	MPDDLQRQEELFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL*
Ga0129336_107109601	3300010370	Freshwater To Marine Saline Gradient	EEEIFLKALKEHKEKKTQEPTDKTTNTLPAVIAAVL*
Ga0151620_10720984	3300011268	Freshwater	MPDDLQREEEIFLKALKEYKKKKSQEPTDKTTNTLPAVIAAAL*
Ga0119951_10183828	3300012000	Freshwater	GWWKMPDDLQREELFFKALKEYKEKKSQEPQDKTTNTLPAVIATVL*
Ga0119951_10708533	3300012000	Freshwater	MPDDLQREEELFLKALKEHKEKKSQEPTDKTTNTLPAVIAAVL*
Ga0129338_10863352	3300012970	Aqueous	MPDDLQKEEELLFKALKEHKEKKSQEPTDKTTNILPAVIAAVL*
Ga0164293_106936681	3300013004	Freshwater	MSYDLQREEEIFLKALKEYKEKKSQEPTDKTTNTLPA
Ga0164293_107623851	3300013004	Freshwater	MPDDLQREEEIFLKALEEYKEKETQEPTDKTTNTLPAVIAAVL*
Ga0164292_103927605	3300013005	Freshwater	MPDDLQREEELFLKALKEYKEKKSQEPTDKTTNILPAVIAAVL*
Ga0119954_10138773	3300014819	Freshwater	LKNWHRRTHRALWMPYNTLIHKRQMPDDLQKEEELFLKALKEYKEKKSQEPKDKTTNTLPAVIAAVL*
Ga0181343_10825603	3300017766	Freshwater Lake	MPDDLQREEELLLKALKEHKEKKSQEPTDKTTNTLPAVIAAVL
Ga0181343_11476522	3300017766	Freshwater Lake	MPDDLQREEEIFLKALKEYKKKKTQEPTDKTTNILPAVIAAVL
Ga0208221_100000713	3300020574	Freshwater	MPDDLQREEELFLKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0222714_100795008	3300021961	Estuarine Water	MPDDLQREEEIFLKALKEYKKKKSQEPTDKTTNTLPAVIAAAL
Ga0196901_100031237	3300022200	Aqueous	MPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAAL
Ga0214917_1001586517	3300022752	Freshwater	MPDDLQREELFFKALKEYKEKKSQEPQDKTTNTLPAVIATVL
Ga0214917_101379764	3300022752	Freshwater	LKNWHRRTHRALWMPYNTLIHKRQMPDDLQKEEELFLKALKEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0214917_101476191	3300022752	Freshwater	LEIEMPDDLQREEEIFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0214917_101549524	3300022752	Freshwater	MPDDLQREEELFFKVLKEYKEKKLQEPTDKTTNTLPAVIAAVL
Ga0247724_100001198	3300024239	Deep Subsurface Sediment	MPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0247724_100456310	3300024239	Deep Subsurface Sediment	MPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAATL
Ga0255147_10039724	3300024289	Freshwater	MPDDLQREEEIFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL
Ga0255148_10100977	3300024306	Freshwater	LKIYGGRRMPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0255141_10435673	3300024351	Freshwater	MLTREKSLKIYGGRRMPDDLQREEELFFKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0256338_10454626	3300024536	Freshwater	DDLQREEEIFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL
Ga0208767_11155762	3300025769	Aqueous	VILPYNTLIHKRQMPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAAL
Ga0209929_11665012	3300026187	Pond Water	MPYNTFIHKSQMPDDLQREEELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAAL
Ga0208009_10325236	3300027114	Deep Subsurface	MPDDLQREEELFFKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0255154_10360571	3300027467	Freshwater	LKIYGGRRMPDDLQREEELFFKALEEYKEKKSQEPKDKTTN
Ga0209668_103416933	3300027899	Freshwater Lake Sediment	MSDDLQREEEMFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0315909_102774282	3300031857	Freshwater	MPDDLRREEEIFLKALKEYKEKKSQEPTDKTTNILPAVIAAVL
Ga0315909_105415492	3300031857	Freshwater	MPDDLQREEELFFKALEEYKEKKSQEPKDKTINTLPAVIAAVL
Ga0315909_109236371	3300031857	Freshwater	EELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0315903_105918773	3300032116	Freshwater	MPDDLRREEEIFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL
Ga0316621_107003812	3300033488	Soil	MPDDLQKEEELLFKALEEYKEKKSQEPIVKPQDDTSNILPAIIAAVLXLSKKPK
Ga0316616_1026181691	3300033521	Soil	MPDDLQKEEELLFKALKEHKEKKSQEPIVKPQDDTSNILPAIISAVL
Ga0316616_1047511653	3300033521	Soil	KKMPDDLQREEELFLKALKEYKEKKTQEPTDKTTNTLPAVIAAVL
Ga0316617_1002831972	3300033557	Soil	MPDDLQREEELFFKALKECKEKKSQEPIVKIKDNTSDILPAVIAAVL
Ga0316617_1026541622	3300033557	Soil	MGCVLPYNTLIHKRQMPDDLQKEEELLFKALEEYKEKKSQEPIVKPQDDTSNILPAIIAAVL
Ga0334980_0017698_326_457	3300033816	Freshwater	MPDDLQRQEEILLKALEEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0334980_0045171_506_637	3300033816	Freshwater	MTDDLQKEEELLFKALEEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0334977_0002072_11196_11327	3300033978	Freshwater	MPDDLQREEEIFLKALEEHKEKKSQEPTDKTTNTLPAVIAAVL
Ga0334977_0103822_891_1022	3300033978	Freshwater	MPDDLQREEEIFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0334982_0030772_474_605	3300033981	Freshwater	MPDDLQREEELFFKALKEYKEKKSQEPTDKTTNTLPAIIAAVL
Ga0334996_0095646_1087_1218	3300033994	Freshwater	MPDDLQREEELFFKALKKYKEKKTQEPTDKTTNILPAVIAAVL
Ga0334996_0219934_75_218	3300033994	Freshwater	MPDDLQKEEELLFKALKEHKEKKSQEPIVKPQDDTSNILPAIIAAVL
Ga0335004_0187344_364_495	3300034021	Freshwater	MPDDLQREEELFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0334987_0003389_3151_3282	3300034061	Freshwater	MPDDLQREEEIFLKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0310127_203627_495_626	3300034072	Fracking Water	MPDDLQIEEEIFLKALEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0310130_0000643_345_476	3300034073	Fracking Water	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNTLPAVIAAAL
Ga0310130_0005541_389_520	3300034073	Fracking Water	MPDDLQREEELFLKVLKEYKEKKTQEPTDKTTNTLPAVIAAVL
Ga0310130_0012818_845_976	3300034073	Fracking Water	MPDDLQQEEELLLKALEKYKEKKSQELTDKKTNTLPAVICAVL
Ga0310130_0073110_329_460	3300034073	Fracking Water	MPDDLQREEELFLKAFEEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0310130_0084947_727_858	3300034073	Fracking Water	MPDDLQREEELFFKALEEYKEKKSQEPTDKITNTLPAVIAAAL
Ga0310130_0302695_305_436	3300034073	Fracking Water	MPDDLQREEKIFLKALKEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0335029_0097526_118_249	3300034102	Freshwater	MPDDLQREEELFFKALEEYKEKKSQEPTDKTTNILPAVIAAVL
Ga0335031_0297416_518_649	3300034104	Freshwater	MPDDLQREEELFFKALKEYKEKKSQEPKDKTTNTLPAVIAAVL
Ga0335036_0342860_631_762	3300034106	Freshwater	MPDDLQREEEIFLKALEEYKEKETQEPTDKTTNTLPAVIAAVL
Ga0335056_0068003_1490_1621	3300034120	Freshwater	MPDDLQREEEIFLKALEEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0335065_0860056_34_165	3300034200	Freshwater	MPDDLQREEELFFKCFEEYKEKKSQEPTDKTTNTLPAVIAAVL
Ga0335049_0735887_483_590	3300034272	Freshwater	MTDDLQKEEELLFKALEEYKEKKSQEPTDKTTNTLP
Ga0335007_0001671_363_494	3300034283	Freshwater	MPDDLQREEEIFLKALEEYVEKKSQEPKDKTTNTLPAVIAAAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090316

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences