Metagenome Family F090295

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090295
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	71 residues
Representative Sequence	MIPCLDPDRPLNAEELADERWERRRARVLTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Number of Associated Samples	57
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.19 %
% of genes near scaffold ends (potentially truncated)	10.19 %
% of genes from short scaffolds (< 2000 bps)	62.96 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (40.741 % of family members)
Environment Ontology (ENVO)	Unclassified (57.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.48% β-sheet: 0.00% Coil/Unstructured: 50.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07275	ArdA	3.70
PF03237	Terminase_6N	2.78
PF00271	Helicase_C	1.85
PF04545	Sigma70_r4	1.85
PF13148	DUF3987	1.85
PF01555	N6_N4_Mtase	0.93
PF10926	DUF2800	0.93
PF16793	RepB_primase	0.93
PF04851	ResIII	0.93
PF02592	Vut_1	0.93
PF13392	HNH_3	0.93
PF00176	SNF2-rel_dom	0.93
PF00476	DNA_pol_A	0.93
PF11134	Phage_stabilise	0.93
PF01844	HNH	0.93
PF04002	RadC	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	3.70
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.93
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	19.44 %
Viruses	superkingdom	All Organisms → Viruses	13.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.44 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.33 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.41 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.41 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.41 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.41 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	1.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.85 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.93 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.41 %
Anabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	1.85 %
unclassified Acidovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax	0.93 %
Pseudomonas tohonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas tohonis	0.93 %
Pseudomonas chlororaphis group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas chlororaphis group	0.93 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.41 %
unclassified Anabaena	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1.85 %
Acidovorax sp. Root70	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Root70	0.93 %
Pseudomonas lundensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas chlororaphis group → Pseudomonas lundensis	0.93 %
Pseudomonas tohonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas tohonis	0.93 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.41 %
Anabaena sp. CRKS33	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	6.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.48 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1.85 %
Acidovorax sp. Root70	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Root70	0.93 %
Pseudomonas lundensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas chlororaphis group → Pseudomonas lundensis	0.93 %
Pseudomonas tohonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas tohonis	0.93 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002161\|JGI24766J26685_10036242	Not Available	1155	Open in IMG/M
3300002161\|JGI24766J26685_10047551	Not Available	971	Open in IMG/M
3300002835\|B570J40625_100028023	Not Available	9027	Open in IMG/M
3300002835\|B570J40625_101184831	Not Available	640	Open in IMG/M
3300005525\|Ga0068877_10005176	All Organisms → cellular organisms → Bacteria	10068	Open in IMG/M
3300005581\|Ga0049081_10188638	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006641\|Ga0075471_10171002	Not Available	1142	Open in IMG/M
3300006802\|Ga0070749_10323359	Not Available	861	Open in IMG/M
3300006875\|Ga0075473_10336878	Not Available	610	Open in IMG/M
3300007973\|Ga0105746_1244709	Not Available	617	Open in IMG/M
3300008266\|Ga0114363_1006442	Not Available	10332	Open in IMG/M
3300008266\|Ga0114363_1080824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Root70	1212	Open in IMG/M
3300009075\|Ga0105090_10068874	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2213	Open in IMG/M
3300009075\|Ga0105090_10901193	Not Available	538	Open in IMG/M
3300009085\|Ga0105103_10186310	Not Available	1106	Open in IMG/M
3300009165\|Ga0105102_10185098	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1033	Open in IMG/M
3300009165\|Ga0105102_10793092	Not Available	539	Open in IMG/M
3300009168\|Ga0105104_10515056	Not Available	674	Open in IMG/M
3300009169\|Ga0105097_10038950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2550	Open in IMG/M
3300009169\|Ga0105097_10100087	Not Available	1584	Open in IMG/M
3300009170\|Ga0105096_10341394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	767	Open in IMG/M
3300010354\|Ga0129333_10069943	All Organisms → Viruses → Predicted Viral	3261	Open in IMG/M
3300010354\|Ga0129333_10424385	Not Available	1174	Open in IMG/M
3300010354\|Ga0129333_10572942	Not Available	982	Open in IMG/M
3300017707\|Ga0181363_1012291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas tohonis	1745	Open in IMG/M
3300017747\|Ga0181352_1011684	Not Available	2829	Open in IMG/M
3300017747\|Ga0181352_1025843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1794	Open in IMG/M
3300017766\|Ga0181343_1013312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	2611	Open in IMG/M
3300020570\|Ga0208465_1000050	Not Available	40118	Open in IMG/M
3300022179\|Ga0181353_1001034	All Organisms → cellular organisms → Bacteria → Proteobacteria	5480	Open in IMG/M
3300022179\|Ga0181353_1007783	All Organisms → cellular organisms → Bacteria → Proteobacteria	2617	Open in IMG/M
3300022179\|Ga0181353_1013781	Not Available	2077	Open in IMG/M
3300022179\|Ga0181353_1028600	All Organisms → Viruses → Predicted Viral	1477	Open in IMG/M
3300022179\|Ga0181353_1041187	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300022179\|Ga0181353_1092788	Not Available	750	Open in IMG/M
3300022190\|Ga0181354_1016025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	2313	Open in IMG/M
3300025889\|Ga0208644_1224446	Not Available	796	Open in IMG/M
3300027683\|Ga0209392_1003950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	4207	Open in IMG/M
3300027683\|Ga0209392_1154156	Not Available	714	Open in IMG/M
3300027693\|Ga0209704_1006224	Not Available	2710	Open in IMG/M
3300027693\|Ga0209704_1174445	Not Available	625	Open in IMG/M
3300027721\|Ga0209492_1021401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2220	Open in IMG/M
3300027721\|Ga0209492_1116054	Not Available	940	Open in IMG/M
3300027793\|Ga0209972_10000944	Not Available	27405	Open in IMG/M
3300027805\|Ga0209229_10003615	Not Available	6406	Open in IMG/M
3300027805\|Ga0209229_10006433	Not Available	4907	Open in IMG/M
3300027805\|Ga0209229_10025462	Not Available	2573	Open in IMG/M
3300027805\|Ga0209229_10162339	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300027805\|Ga0209229_10257213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776	Open in IMG/M
3300027972\|Ga0209079_10165500	Not Available	757	Open in IMG/M
3300029349\|Ga0238435_109709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	898	Open in IMG/M
3300031857\|Ga0315909_10007445	All Organisms → cellular organisms → Bacteria	12228	Open in IMG/M
3300031857\|Ga0315909_10022465	Not Available	6309	Open in IMG/M
3300031857\|Ga0315909_10129813	Not Available	2112	Open in IMG/M
3300031951\|Ga0315904_10023332	All Organisms → cellular organisms → Bacteria	7365	Open in IMG/M
3300031951\|Ga0315904_10292979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1530	Open in IMG/M
3300031951\|Ga0315904_11038374	Not Available	646	Open in IMG/M
3300031963\|Ga0315901_10118690	Not Available	2412	Open in IMG/M
3300031963\|Ga0315901_10367946	Not Available	1164	Open in IMG/M
3300032050\|Ga0315906_10222721	All Organisms → Viruses → Predicted Viral	1757	Open in IMG/M
3300033418\|Ga0316625_100850203	Not Available	791	Open in IMG/M
3300033418\|Ga0316625_101043911	Not Available	732	Open in IMG/M
3300033557\|Ga0316617_101002989	Not Available	816	Open in IMG/M
3300033557\|Ga0316617_101815131	Not Available	623	Open in IMG/M
3300033978\|Ga0334977_0005751	Not Available	7062	Open in IMG/M
3300033978\|Ga0334977_0027187	Not Available	3248	Open in IMG/M
3300033979\|Ga0334978_0037923	Not Available	2519	Open in IMG/M
3300033979\|Ga0334978_0106349	Not Available	1420	Open in IMG/M
3300033979\|Ga0334978_0329455	Not Available	728	Open in IMG/M
3300033980\|Ga0334981_0016495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	4112	Open in IMG/M
3300033980\|Ga0334981_0432453	Not Available	558	Open in IMG/M
3300033981\|Ga0334982_0179069	Not Available	1061	Open in IMG/M
3300033993\|Ga0334994_0350288	Not Available	731	Open in IMG/M
3300034012\|Ga0334986_0004295	Not Available	11037	Open in IMG/M
3300034012\|Ga0334986_0097934	Not Available	1763	Open in IMG/M
3300034012\|Ga0334986_0103641	Not Available	1701	Open in IMG/M
3300034012\|Ga0334986_0142819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	1389	Open in IMG/M
3300034012\|Ga0334986_0147413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1361	Open in IMG/M
3300034012\|Ga0334986_0245685	Not Available	975	Open in IMG/M
3300034012\|Ga0334986_0254204	Not Available	953	Open in IMG/M
3300034020\|Ga0335002_0295986	Not Available	946	Open in IMG/M
3300034020\|Ga0335002_0476359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas chlororaphis group → Pseudomonas lundensis	673	Open in IMG/M
3300034061\|Ga0334987_0002811	Not Available	16880	Open in IMG/M
3300034061\|Ga0334987_0035249	Not Available	4318	Open in IMG/M
3300034061\|Ga0334987_0189481	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300034062\|Ga0334995_0015817	All Organisms → cellular organisms → Bacteria	6878	Open in IMG/M
3300034062\|Ga0334995_0255053	Not Available	1178	Open in IMG/M
3300034063\|Ga0335000_0127387	Not Available	1712	Open in IMG/M
3300034092\|Ga0335010_0426628	Not Available	717	Open in IMG/M
3300034103\|Ga0335030_0500642	Not Available	766	Open in IMG/M
3300034104\|Ga0335031_0541344	Not Available	699	Open in IMG/M
3300034106\|Ga0335036_0032483	Not Available	4097	Open in IMG/M
3300034106\|Ga0335036_0071327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2604	Open in IMG/M
3300034106\|Ga0335036_0851958	Not Available	522	Open in IMG/M
3300034109\|Ga0335051_0001425	Not Available	12446	Open in IMG/M
3300034109\|Ga0335051_0002971	All Organisms → cellular organisms → Bacteria → Proteobacteria	9186	Open in IMG/M
3300034109\|Ga0335051_0049150	All Organisms → Viruses → Predicted Viral	2254	Open in IMG/M
3300034109\|Ga0335051_0205361	Not Available	984	Open in IMG/M
3300034109\|Ga0335051_0221899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	938	Open in IMG/M
3300034109\|Ga0335051_0362291	Not Available	692	Open in IMG/M
3300034112\|Ga0335066_0391987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	760	Open in IMG/M
3300034118\|Ga0335053_0429077	Not Available	795	Open in IMG/M
3300034119\|Ga0335054_0000115	Not Available	40954	Open in IMG/M
3300034120\|Ga0335056_0251492	Not Available	997	Open in IMG/M
3300034120\|Ga0335056_0414051	Not Available	724	Open in IMG/M
3300034120\|Ga0335056_0458972	Not Available	677	Open in IMG/M
3300034122\|Ga0335060_0455025	Not Available	667	Open in IMG/M
3300034272\|Ga0335049_0009170	Not Available	7355	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.30%
Terrestrial	Environmental → Terrestrial	3.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.89%
Marine	Environmental → Aquatic → Marine	7.41%
Soil	Environmental → Terrestrial → Soil	3.70%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	43.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	22.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.33%
Coastal	Environmental → Aquatic → Marine → Coastal	7.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.52%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.70%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	40.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	14.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.04%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.33%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	6.48%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.78%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.78%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.85%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300020570	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300029349	Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24766J26685_100362421	3300002161	Freshwater And Sediment	MLYGPAMPCLDPDRPLTRSELDDERWERRRARVLTRTHVERLEAALRWALEQIEDSLDPDHQDALVDAWDLLEGTE*
JGI24766J26685_100475512	3300002161	Freshwater And Sediment	MPNIPCLDPDRPLTRSELKDIRLERWRARELTRQHVEELKAALRWALDQIDDDLDLDHQAALAGAWALVDGPG*
B570J40625_10002802310	3300002835	Freshwater	MPYIPCLDPDRPLNAEELADERWEARRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE*
B570J40625_1011848311	3300002835	Freshwater	MGGLTMYGPAMPCLDPDRPLNAEELADERWERRRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALA
Ga0068877_100051763	3300005525	Freshwater Lake	MNPIMNPCLDPDRPLTPSELADEAWERRRARVRTRAHVERLETALRWALEQIEDDLCPDHQAAMADAWSLLED*
Ga0049081_101886382	3300005581	Freshwater Lentic	MPDIPCLDPDRPPNAEELADERWERRRARVRTRAHIEHLETALRWALEQIEDDLDLDHQAALADAWELLEDE*
Ga0075471_101710024	3300006641	Aqueous	MDIPCLDPDRPLTPSELADERWERRSPYVLTRAHVERLEAALRWALERLDYDPDQYSAYIDALALLEE*
Ga0070749_103233591	3300006802	Aqueous	MLYGPAMPCMDPDRPMTPSELADERWERRRPYVLTRAHVESLEDALRWALDQIKYDPATYSAYIDALALLED*
Ga0075473_103368782	3300006875	Aqueous	MDIPCLDPDRPLTPSELADERWERRRPYVLTRDHVERLEAALRWALEQMEYDPDQYSAYIDALALLED*
Ga0105746_12447091	3300007973	Estuary Water	LTRSEYLDEQWERRRARVLTRAHVERLEAALHWALDQLDDDLDPDHQAALADAWSLLEGIE*
Ga0114363_10064427	3300008266	Freshwater, Plankton	MIPCLDPDRPLTPSELADERWERRRPYALTRAHVERLEDALRWALEQMKYDPATYSAYIDALALLED*
Ga0114363_10808242	3300008266	Freshwater, Plankton	MDPDRPLTPSELADERWERRRPYVLTRAHVERLEAALRWALDQMKYDPATYSAYIDALALLED*
Ga0105090_100688747	3300009075	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEAALRWALEQIDDDLDPDHQAALVDAWDLLEGIE*
Ga0105090_109011932	3300009075	Freshwater Sediment	MYGPGIPCLDPDKPLTRSEYLDEQCERRRARVLTRAHVERLEVALRWALDQLDDDLDPDHQAALADAWALLEGIE*
Ga0105103_101863101	3300009085	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEAALRWALEQIADDLDPDHQAAHVDAWDLLEGIE*
Ga0105102_101850982	3300009165	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDERWERRRPYALTRAHVERLEAALRWALDQLDDDLDPDHQAALADAWALLEGIE*
Ga0105102_107930922	3300009165	Freshwater Sediment	MYGPGIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEAALRWALEQIDDDLDPDHQAALVDAWDLLEGIE*
Ga0105104_105150561	3300009168	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEAALRWALEQIDDDLNPDHQAALADAWSLVEDE*
Ga0105097_100389501	3300009169	Freshwater Sediment	MLYGPGIPCLDPDKPLTRSEYLDEQWERRRARVLTRAHVERLEVALRWALDQLDDDLDPDHQAALDDAWSLVEDE*
Ga0105097_101000873	3300009169	Freshwater Sediment	MTPSELADERWERRRARVLTRAHVERLETALRWALDQLDDDLDPDHQAALADAWSLVEDE
Ga0105096_103413941	3300009170	Freshwater Sediment	DPDKPLTLSEYLDERWERRRPYALTRAHVERLEAALRWALDQLDDDLDPDHQAALADAWALLEGIE*
Ga0129333_100699438	3300010354	Freshwater To Marine Saline Gradient	MHPIMRPCLDPDRPLSPEELADERWERRRARVLTRAHVERLEAALRWALEQMEYDPDQYSAYIDALALLED*
Ga0129333_104243851	3300010354	Freshwater To Marine Saline Gradient	MPDIPCLDPDRPLTPSELADERWERRRPYVLTRAHVERLEAALRWALEQIDDDLDPDHQLALADAWELLED*
Ga0129333_105729422	3300010354	Freshwater To Marine Saline Gradient	MDPDRPLTPEELADERWEARRARVRTRAHIERLETALRWALEQIEDDLDLDHQAALEDAWSLLED*
Ga0181363_10122915	3300017707	Freshwater Lake	MPDIPCLDPDRPLNAEELAEEHWERRRKRVLTRAHVESLETALRWALEQLGDALCVDHQAALADAWSLLED
Ga0181352_10116841	3300017747	Freshwater Lake	MYGPAMPCMDPDRPLNADELADERWERRRPYVLTRGHVESLEEALRWALDQIKYDPKTYSDYLDALALLED
Ga0181352_10258435	3300017747	Freshwater Lake	MYGPAMPCLDPDRPLTAEELADERWERRRPYTLTRGHIESLEEALRWALDQIKYDPKTYSDYLDALALLED
Ga0181343_10133126	3300017766	Freshwater Lake	MYGPAMPCLDPDRPLTAEELEEERWERRQGRVRTRAHIEHLEAALRWALEQVEDDLCPDHQAALADAWSLLED
Ga0208465_10000502	3300020570	Freshwater	MPYIPCLDPDRPLNAEELADERWEARRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0181353_10010347	3300022179	Freshwater Lake	MNPIMIPCLDPDKPLTREELADERWERRRARVRTRAHIERLETALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0181353_10077838	3300022179	Freshwater Lake	MPDIPCLDPDRPLNAEELADERWEARRARVLTRAHVESLEEALRWALDQIKYDPKTYSAYLDALALLED
Ga0181353_10137813	3300022179	Freshwater Lake	MPDIPCLDPDRPLNAEELADERWERRRARVRTRAHIERLETALHWALEQIEDDLDLDHQAALADAWELLED
Ga0181353_10286006	3300022179	Freshwater Lake	MPDIPCLDPDRPMTPSELADEAWERRRARVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0181353_10411871	3300022179	Freshwater Lake	LDPDRPLNAEELAEEHWERRRKRVLTRAHVESLETALRWALEQLGDALCVDHQAALADAWSLLED
Ga0181353_10927882	3300022179	Freshwater Lake	MPDIPCLDPDRPLNAEELAEEHWERRRKRVLTRAHVESLETALRWALEQIEDDLDLDHQAALADAWSLLED
Ga0181354_10160255	3300022190	Freshwater Lake	MIPCLDPDKPLTREELADERWERRRARVRTRAHIERLETALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0208644_12244463	3300025889	Aqueous	MDIPCLDPDRPLTPSELADERWERRRPYVLTRAHVERLEAALRWALEQIDDDLDPDHQLALADAWELLED
Ga0209392_10039507	3300027683	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEAALRWALEQIDDDLDPDHQAALVDAWDLLEGIE
Ga0209392_11541562	3300027683	Freshwater Sediment	MPYIPCLDPDKPLTRSEYLDEQWERRRARVLTRAHVERLEVALRWALDQLDDDLDPDHQDALADAWSLVEDE
Ga0209704_10062241	3300027693	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLETALRWALEQIDDDLDPDHQAALADA
Ga0209704_11744452	3300027693	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDERWERRRPYALTRAHVERLEAALRWALDQLDDDLDPDHQAALADAWALLEGIE
Ga0209492_10214015	3300027721	Freshwater Sediment	MLYGPGIPCLDPDKPLTRSEYLDEQWERRRARVLTRAHVERLEVALRWALDQLDDDLDPDHQAALDDAWSLVEDE
Ga0209492_11160542	3300027721	Freshwater Sediment	MLYGPGIPCLDPDRPMTPSELADERWERRRARVLTRAHVERLETALRWALDQLDDDLDPDHQAALADAWSLVEDE
Ga0209972_1000094418	3300027793	Freshwater Lake	MNPIMNPCLDPDRPLTPSELADEAWERRRARVRTRAHVERLETALRWALEQIEDDLCPDHQAAMADAWSLLED
Ga0209229_100036159	3300027805	Freshwater And Sediment	MPNIPCLDPDRPLTRSELKDIRLERWRARELTRQHVEELKAALRWALDQIDDDLDLDHQAALAGAWALVDGPG
Ga0209229_100064333	3300027805	Freshwater And Sediment	MLYGPAMPCLDPDRPLTRSELDDERWERRRARVLTRTHVERLEAALRWALEQIEDSLDPDHQDALVDAWDLLEGTE
Ga0209229_100254625	3300027805	Freshwater And Sediment	MLYGPAMPCLDPDRPLNAEELADERWERRRARVLTRAHVERLEAALRWALDQIEDSLDPDHQDALVDAWDLLEGTE
Ga0209229_101623392	3300027805	Freshwater And Sediment	MPYIPCLDPDKPLTRSEYLDEQWERRRARVLTRAHVERLETALRWALDQLDDDLDPDHQAALADAWALLEGIE
Ga0209229_102572133	3300027805	Freshwater And Sediment	MLYGPGIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEVALRWALDQIDEDPTAWPADHQAALADAW
Ga0209079_101655002	3300027972	Freshwater Sediment	MPYIPCLDPDKPLTLSEYLDEQWERRRARVLTRAHVERLEVALRWALEQIDDDLNPDHQDALVDAWDLLEGIE
Ga0238435_1097093	3300029349	Freshwater	MHPIMRPCLDPDRPLNAEELADERWERRRARVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWELLED
Ga0315909_100074454	3300031857	Freshwater	MYGPAMPCMDPDRPLTPSELADERWERRRPYVLTRAHVERLEAALRWALDQMKYDPATYSAYIDALALLED
Ga0315909_100224658	3300031857	Freshwater	MQPVMIPCLDPDRPLTPSELADERWERRRPYALTRAHVERLEDALRWALEQMKYDPATYSAYIDALALLED
Ga0315909_101298135	3300031857	Freshwater	MYGPAMPCMDPDRPMTPSELADERWERRRPYVLTRAHVERLETALRWALEQIEYDPATYSAYIDALALLED
Ga0315904_100233325	3300031951	Freshwater	MPYIPCLDPNRPLTRSELEEERRDRWRERELTRPHVDELKAALRWALDQVEDDLDLDHKAALAGAWALLED
Ga0315904_102929794	3300031951	Freshwater	MYGPAMPCMDPDRPLNREELADERWERRRARVRTRAHIERLETALRWALEQIEDDLDLDHQAALEDAWSLLED
Ga0315904_110383742	3300031951	Freshwater	MLYGPGIPCLDPDRPLTRSELDDERWERRRARVLTRAHVELLEAALRWALDQMEDDPDPANQAAWFAAWELVDDA
Ga0315901_101186903	3300031963	Freshwater	MPDIPCLDPDRPLTPSELADERWERRRPYVLTRAHVERLETALRWALDQMEYDPENYSAYIDALALLED
Ga0315901_103679464	3300031963	Freshwater	MQPVMIPCLDPDRPLNAEELADERWERRRARVRTRAHIERLETALRWALEQIEDDLDLDHQAALEDAWSLLED
Ga0315906_102227211	3300032050	Freshwater	PVMIPCLDPDRPLTPSELADERWERRRPYALTRAHVERLEDALRWALEQMKYDPATYSAYIDALALLED
Ga0316625_1008502031	3300033418	Soil	MNPIMIPCLDPDRPLTPSELADERWERRRARVLTRAHVERLEAALRWALEQMEDSLDPDHQDALVDAWDLLEGTE
Ga0316625_1010439112	3300033418	Soil	MPDIPCLDPDRPLTPSELADERWERRRPYVLTRAHVERLEDALRWALEQMEYDPATYSAYIDALALLED
Ga0316617_1010029891	3300033557	Soil	MYGPGIPCLDPDRPLTPSELADERWERRRARVLTRAHVERLEAALRWALDQLDDDLDPDHQAALVDAWDLLEGLE
Ga0316617_1018151312	3300033557	Soil	MPDIPCLDPDRPLTPTELADERWERRRPYVLTRAHVERLEDALRWALEQMEYDPATYSAYIDALALLED
Ga0334977_0005751_869_1072	3300033978	Freshwater	MPCLDPDRPLTREELADERWERRRGRVLTRAHIEHLETALRWALEQIEETPGNRSALADAWELLEEE
Ga0334977_0027187_2040_2249	3300033978	Freshwater	MPCLDPDKPLTREELDDERWEARRARVLTRAHIERLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0334978_0037923_2015_2236	3300033979	Freshwater	MYGPAMPCLDPDRPLSPEELDDERWEARRARVLTRAHVERLEAALRWALEQIDDDLDLDHQAALADAWELLED
Ga0334978_0106349_537_743	3300033979	Freshwater	MPCLDPDKPLTPSELADEAWERRRKRVLTRAHVESLETALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0334978_0329455_527_727	3300033979	Freshwater	MPDIPCLDPDRPLNAEELADERWERRRGRVRTRAHIERLETALRWALEQIEDDLDLDHQAALADAWS
Ga0334981_0016495_3777_3980	3300033980	Freshwater	MDPDRPLNAEELADERWEARRGRVRTRAHIERLETALRWALEQIEDDLDLDHQAALADAWELLEDEQ
Ga0334981_0432453_28_243	3300033980	Freshwater	MPDIPCLDPDRPLNAEELADERWERRRGRVRTRAHIERLETALRWALEQIEDDLDLDHQAALADAWSLLED
Ga0334982_0179069_436_657	3300033981	Freshwater	MNPIMIPCLDPDRPLNAEELADERWERRRARVLTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0334994_0350288_494_712	3300033993	Freshwater	MEIPCLDPDRPLSPSELADERWERRRARVRTRAHIERLEAALHWALEHMQIDDKLDPDQHAALTDAWSLLED
Ga0334986_0004295_7929_8141	3300034012	Freshwater	MEIPCLDPDRPLTPSELADERWEARRARVLTRAHIEHLEAALRWALEQIEDDLDLDHQAALEDAWSLLED
Ga0334986_0097934_190_399	3300034012	Freshwater	MIPCLDPDRPLTREELADERWERRRARVLTRAHIERLEDALRWALEQVEDDLCPDHQAAMADAWSLLED
Ga0334986_0103641_943_1152	3300034012	Freshwater	MPCLDPDRPLNAEELADERWEARRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0334986_0142819_804_1019	3300034012	Freshwater	MPDIPCLAPDRPLNAEELADERWERRRARVLTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0334986_0147413_1074_1283	3300034012	Freshwater	MIPCLDPDRPLNAEELADEAWERRQGRVRTRAHIEHLEAALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0334986_0245685_534_755	3300034012	Freshwater	MYGPAIPCLDPDKPLTREELDDERWERRRARVRTRAHIERLETALRWALEQIEDDLDLDHQAAMADAWSLLED
Ga0334986_0254204_763_951	3300034012	Freshwater	MPYIPCLDPDRPLNAEELADERWEARRARVRTRAHIERLETALRWALEQVEDDLDPDHQAALA
Ga0335002_0295986_284_499	3300034020	Freshwater	MIPCLDPDRPLTREELADERWERRRARVLTRAHIERLEDALRWALEQVEDDLCPDHQAAMADAWSLLEDEE
Ga0335002_0476359_66_281	3300034020	Freshwater	MPNIPCLDPDRPLNTEELADERWERRRGRVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0334987_0002811_7347_7574	3300034061	Freshwater	MQPVMIPCLDPDKPLSPEELEEERWERRRARVRTRAHIERLETALRWALEQIEDDLCPDHQAALADAWSLVEDAE
Ga0334987_0035249_1651_1860	3300034061	Freshwater	MPCLDPDKPLTREELDDERWERRRARVLTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0334987_0189481_527_742	3300034061	Freshwater	MPDIPCLDPDKPLTVSELADEAWERRQKRVLTRAHVESLETALRWALEQVEDDLDLDHQAALADAWELLED
Ga0334995_0015817_359_574	3300034062	Freshwater	MPYIPCLDPDRPLNAEELADERWEARRARVRTRAHIERLETALRWALEQVEDDLDPDHQAALADAWELLED
Ga0334995_0255053_907_1128	3300034062	Freshwater	MNPIMIPCLDPDKPLTREELDDERWERRRARVRTRAHIERLETALRWALEQIEDDLDLDHQAAMADAWSLLED
Ga0335000_0127387_152_361	3300034063	Freshwater	MIPCLDPDRPLSPEELADERWEARRARVRTRAHIEHLETALRWALEQVEDDLCPDHQAALADAWSLLED
Ga0335010_0426628_3_203	3300034092	Freshwater	CLDPDRPLNAEELADERWEARRARVRTRAHIERLETALRWALEQVEDDLDPDHQAALADAWELLED
Ga0335030_0500642_90_299	3300034103	Freshwater	MPCLDPDRPLNAEELADERWERRRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0335031_0541344_260_475	3300034104	Freshwater	MPDIPCLDPDKPLNAEELADEAWERRRKRVLTRAHVESLETALRWALEQIEDDLCPDHQAALADAWSLLED
Ga0335036_0032483_392_619	3300034106	Freshwater	MYGPAMPCMDPDRPLTPSELEEIRRERRRARVRTRAHIERLETALRWALEQIEDDLCPDHQAALADAWELLEDDE
Ga0335036_0071327_395_610	3300034106	Freshwater	MPYIPCLAPDRPLNAEELADERWERRRARVLTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335036_0851958_70_279	3300034106	Freshwater	MPDIPCLDPDKPLTPSELADEAWERRRKRVLTRAHVESLETALRWALEQIEETPGNRSALADAWSLLED
Ga0335051_0001425_8090_8299	3300034109	Freshwater	MIPCLDPDRPLNAEELADERWERRRARVLTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335051_0002971_7183_7398	3300034109	Freshwater	MPDIPCLDPDRPLNAEELADERWERRRGRVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335051_0049150_493_708	3300034109	Freshwater	MPDIPCLDPDRPLNAEELADERWEARRARVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335051_0205361_69_290	3300034109	Freshwater	MNPIMRPCLDPDRPLNAEELADEAWERRRARVRTRAHIERLETALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335051_0221899_491_706	3300034109	Freshwater	MPHIPCLDPDRPLNAEELADERWERRRARVRTRAHIEHLEAALRWALEQVEDDLDLDHQAALADAWSLLED
Ga0335051_0362291_284_493	3300034109	Freshwater	MIPCLDPDRPLNAEELADEAWERRQGRVRTRAHIEHLEAALRWALEQIEDDLDLDHQAALEDAWSLLED
Ga0335066_0391987_422_643	3300034112	Freshwater	MNPIMIPCLDPDRPLNAEELADERWERRRGRVLTRAHVEHLETALRWALEQVEDDLDLDHQAALADAWELLED
Ga0335053_0429077_423_644	3300034118	Freshwater	MNPIMIPCLDPDRPLNAEELADERWEARRARVLTRAHIERLETALRWALEQIDDDLDLDHQAALADAWELLED
Ga0335054_0000115_6339_6557	3300034119	Freshwater	MDIPCLDPDRPLTPSELADERWERRSPYVLTRAHVERLEAALRWALDQIDDDLDPDHQAALADAWALLEVDE
Ga0335056_0251492_724_963	3300034120	Freshwater	MGGLTMYGPAMPCLDPDKPLTREELDDERWEARRGRVRTRAHIEHLEAALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0335056_0414051_486_722	3300034120	Freshwater	MGGLTMYGPAMPCLDPDRPLNAEELADERWERRRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSLLEDE
Ga0335056_0458972_1_210	3300034120	Freshwater	MNPIMIPCLDPDKPLTREELADERWEARRARVRTRAHIEHLETALRWALEQIEDDLCPDHQAALADAWSL
Ga0335060_0455025_353_559	3300034122	Freshwater	MPCLDPDKPLTREELDDERWERRRARVRTRAHIERLETALRWALEQIEDDLDLDHQAAMADAWSLLED
Ga0335049_0009170_961_1164	3300034272	Freshwater	MDPDRPLNREELADERWERRRGRVRTRAHIERLETALRWALEQIEDDLCPDHQAALADAWELLEDEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences