Metagenome Family F090268

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090268
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	38 residues
Representative Sequence	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKVMEDDEK
Number of Associated Samples	61
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.58 %
% of genes near scaffold ends (potentially truncated)	10.19 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (29.630 % of family members)
Environment Ontology (ENVO)	Unclassified (78.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.31% β-sheet: 0.00% Coil/Unstructured: 47.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00961	LAGLIDADG_1	22.22
PF00145	DNA_methylase	18.52
PF13759	2OG-FeII_Oxy_5	9.26
PF14528	LAGLIDADG_3	3.70
PF05063	MT-A70	1.85
PF03592	Terminase_2	1.85
PF00730	HhH-GPD	0.93
PF01327	Pep_deformylase	0.93
PF14236	DUF4338	0.93
PF12705	PDDEXK_1	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	18.52
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	3.70
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.85
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.93
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.93
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.93
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.93
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.93
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.74 %
Unclassified	root	N/A	33.33 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.33 %
Unclassified	root	N/A	33.33 %
Viruses	superkingdom	All Organisms → Viruses	7.41 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.33 %
Unclassified	root	N/A	33.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	12.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.85 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	12.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	12.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Rhizobiales bacterium TMED227	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	12.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Rhizobiales bacterium TMED227	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	0.93 %
Rhizobiales bacterium TMED227	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	0.93 %
Rhizobiales bacterium TMED227	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	3.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	0.93 %
Rhizobiales bacterium TMED227	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	0.93 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.93 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000947\|BBAY92_10039741	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300000949\|BBAY94_10131329	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	682	Open in IMG/M
3300001945\|GOS2241_1017139	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300002488\|JGI25128J35275_1023809	Not Available	1481	Open in IMG/M
3300006735\|Ga0098038_1007692	Not Available	4324	Open in IMG/M
3300006735\|Ga0098038_1087692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1084	Open in IMG/M
3300006735\|Ga0098038_1189567	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006737\|Ga0098037_1036739	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300006737\|Ga0098037_1038636	Not Available	1744	Open in IMG/M
3300006737\|Ga0098037_1161208	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006737\|Ga0098037_1300962	Not Available	506	Open in IMG/M
3300006929\|Ga0098036_1057520	Not Available	1205	Open in IMG/M
3300006929\|Ga0098036_1132606	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300006929\|Ga0098036_1201694	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300007963\|Ga0110931_1170285	unclassified Hyphomonas → Hyphomonas sp.	652	Open in IMG/M
3300008216\|Ga0114898_1009226	All Organisms → Viruses → Predicted Viral	3922	Open in IMG/M
3300008216\|Ga0114898_1027513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1927	Open in IMG/M
3300008217\|Ga0114899_1209947	Not Available	614	Open in IMG/M
3300008220\|Ga0114910_1204615	Not Available	542	Open in IMG/M
3300009413\|Ga0114902_1088903	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300009413\|Ga0114902_1099105	Not Available	778	Open in IMG/M
3300009414\|Ga0114909_1193094	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009481\|Ga0114932_10029204	Not Available	3691	Open in IMG/M
3300009481\|Ga0114932_10177570	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1301	Open in IMG/M
3300009481\|Ga0114932_10206703	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1193	Open in IMG/M
3300009481\|Ga0114932_10714376	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009602\|Ga0114900_1117060	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009604\|Ga0114901_1132681	Not Available	759	Open in IMG/M
3300009604\|Ga0114901_1196016	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009605\|Ga0114906_1095248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1075	Open in IMG/M
3300009620\|Ga0114912_1162046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	520	Open in IMG/M
3300009703\|Ga0114933_10021945	Not Available	4972	Open in IMG/M
3300009703\|Ga0114933_10092785	All Organisms → Viruses → Predicted Viral	2133	Open in IMG/M
3300009703\|Ga0114933_10770012	Not Available	615	Open in IMG/M
3300009703\|Ga0114933_10862820	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300011013\|Ga0114934_10349733	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300011013\|Ga0114934_10430165	Not Available	586	Open in IMG/M
3300012920\|Ga0160423_10204229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1376	Open in IMG/M
3300012952\|Ga0163180_11201000	Not Available	619	Open in IMG/M
3300012953\|Ga0163179_10421061	All Organisms → Viruses → Predicted Viral	1088	Open in IMG/M
3300012953\|Ga0163179_10450539	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300012953\|Ga0163179_10857831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED227	782	Open in IMG/M
3300012953\|Ga0163179_12118810	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	519	Open in IMG/M
3300017710\|Ga0181403_1025225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1258	Open in IMG/M
3300017713\|Ga0181391_1125272	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300017720\|Ga0181383_1037490	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1305	Open in IMG/M
3300017721\|Ga0181373_1005240	Not Available	2489	Open in IMG/M
3300017729\|Ga0181396_1070609	Not Available	702	Open in IMG/M
3300017740\|Ga0181418_1053444	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1003	Open in IMG/M
3300017741\|Ga0181421_1038049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1292	Open in IMG/M
3300017750\|Ga0181405_1121307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	652	Open in IMG/M
3300017755\|Ga0181411_1055064	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300017755\|Ga0181411_1161273	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300017756\|Ga0181382_1041833	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300017758\|Ga0181409_1070670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300017764\|Ga0181385_1102019	Not Available	878	Open in IMG/M
3300017764\|Ga0181385_1110475	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	841	Open in IMG/M
3300017764\|Ga0181385_1185151	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300017769\|Ga0187221_1118686	Not Available	798	Open in IMG/M
3300017770\|Ga0187217_1257563	Not Available	568	Open in IMG/M
3300017771\|Ga0181425_1217175	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300017773\|Ga0181386_1031112	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300020410\|Ga0211699_10063664	All Organisms → Viruses → environmental samples → uncultured virus	1364	Open in IMG/M
3300020413\|Ga0211516_10498062	Not Available	532	Open in IMG/M
3300020419\|Ga0211512_10043877	Not Available	2168	Open in IMG/M
3300020436\|Ga0211708_10104361	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1111	Open in IMG/M
3300020452\|Ga0211545_10543247	Not Available	522	Open in IMG/M
3300020454\|Ga0211548_10488894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	603	Open in IMG/M
3300020454\|Ga0211548_10576286	Not Available	550	Open in IMG/M
3300020454\|Ga0211548_10588393	Not Available	544	Open in IMG/M
3300020463\|Ga0211676_10210772	Not Available	1167	Open in IMG/M
3300020474\|Ga0211547_10671165	Not Available	509	Open in IMG/M
3300022074\|Ga0224906_1004382	All Organisms → Viruses	6063	Open in IMG/M
3300022074\|Ga0224906_1033829	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300022074\|Ga0224906_1053989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1279	Open in IMG/M
3300022074\|Ga0224906_1117816	Not Available	771	Open in IMG/M
3300024344\|Ga0209992_10104278	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1270	Open in IMG/M
3300024344\|Ga0209992_10243326	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	750	Open in IMG/M
3300024344\|Ga0209992_10398134	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025127\|Ga0209348_1003491	Not Available	7102	Open in IMG/M
3300025127\|Ga0209348_1010227	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300025127\|Ga0209348_1022331	All Organisms → Viruses	2349	Open in IMG/M
3300025127\|Ga0209348_1059522	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300025127\|Ga0209348_1070726	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1130	Open in IMG/M
3300025128\|Ga0208919_1107009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	896	Open in IMG/M
3300025128\|Ga0208919_1111320	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300025128\|Ga0208919_1243114	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	525	Open in IMG/M
3300025132\|Ga0209232_1022769	Not Available	2451	Open in IMG/M
3300025132\|Ga0209232_1024085	Not Available	2373	Open in IMG/M
3300025132\|Ga0209232_1068138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300025132\|Ga0209232_1074302	All Organisms → Viruses → Predicted Viral	1189	Open in IMG/M
3300025132\|Ga0209232_1095017	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300025132\|Ga0209232_1145496	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300025132\|Ga0209232_1174614	Not Available	671	Open in IMG/M
3300025132\|Ga0209232_1175178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	670	Open in IMG/M
3300025132\|Ga0209232_1194389	Not Available	623	Open in IMG/M
3300025251\|Ga0208182_1049666	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300025267\|Ga0208179_1051943	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300025301\|Ga0208450_1140528	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300028022\|Ga0256382_1003299	All Organisms → Viruses → Predicted Viral	2480	Open in IMG/M
3300029319\|Ga0183748_1037969	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1478	Open in IMG/M
3300029319\|Ga0183748_1070675	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300029448\|Ga0183755_1029436	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300029787\|Ga0183757_1001611	Not Available	9507	Open in IMG/M
3300029787\|Ga0183757_1041067	Not Available	872	Open in IMG/M
3300029787\|Ga0183757_1065741	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.15%
Algae	Host-Associated → Algae	1.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.15%
Green Algae	Host-Associated → Algae → Green Algae	1.85%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	49.07%
Strait	Environmental → Aquatic → Marine → Strait	20.37%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.74%
Volcanic	Environmental → Aquatic → Marine → Volcanic	12.04%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.85%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	48.15%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	20.37%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.74%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	12.04%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	29.63%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	20.37%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.74%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	13.89%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	12.04%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.63%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.85%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001945	Marine microbial communities from Galapagos, Equador - GS026	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY92_100397414	3300000947	Macroalgal Surface	MTMFHGLGMFILGMFAIIIGGMIAWYIINKVMKNDGR*
BBAY94_101313292	3300000949	Macroalgal Surface	MTMYHGLGMFILGMFAIIVGGMIAWYVINKVVKDDEEK*
GOS2241_10171392	3300001945	Marine	MTMFHGLGMFILGMFAIIIGGIIAWYIINKVMEDDGR*
JGI25128J35275_10238094	3300002488	Marine	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDENNSDN*
Ga0098038_10076928	3300006735	Marine	MSFYHGLSMFFFSMGALIVGALITWYVINKVMEDDEKK*
Ga0098038_10876922	3300006735	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKVMEDDDT*
Ga0098038_11895673	3300006735	Marine	MSFYHGLGMFIFGMSAFIIGGIITWYVINKVMEDNDT*
Ga0098037_10367395	3300006737	Marine	MSFYDGLGMFFLGMGAIIVGGMIAWYVINKVMEDDEKK*
Ga0098037_10386365	3300006737	Marine	MTMFHGLGMFILGMFAIIIGGVIAWYIINKVEKNDEEER*
Ga0098037_11612082	3300006737	Marine	MSFYHGLGMFIFGMSAFIIGGIIAWYVINKVMEDDEVE*
Ga0098037_13009622	3300006737	Marine	MSFYHGLGMFFLGMGAIIVGGMVAWYVINKVMEDDENNNN*
Ga0098036_10575202	3300006929	Marine	MTMFHGLGMFILGMFAIIVGGMIAWYVINKVMEDDEKK*
Ga0098036_11326062	3300006929	Marine	MSFYHGLGMFIFGMSAFIIGGIIAWYIINKVMEDDDT*
Ga0098036_12016942	3300006929	Marine	MSFYYGLGMFFLGMGAIIVGGMIAWYIINKVMEDDEVE*
Ga0110931_11702852	3300007963	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVTEDNDT*
Ga0114898_10092262	3300008216	Deep Ocean	MSFYHGLSMFFLGMGVIIIGGMIAWYVINKVTEDDDT*
Ga0114898_10275134	3300008216	Deep Ocean	MSFYHGLGMFIFGMSAIIIGGIIVWYVINKVMEDDERR*
Ga0114899_12099472	3300008217	Deep Ocean	EFRMSFYHGLGMFFLGMGAIIIGGTIAWYVINKVMEDDEVE*
Ga0114910_12046151	3300008220	Deep Ocean	MSFYHGLGMFFLGMSAIIIGGIIAWYVINKVMEDDDT*
Ga0114902_10889032	3300009413	Deep Ocean	MSFYHGLGMLFLGMSAFIIGGIIAWYIINKVMEDDDT*
Ga0114902_10991051	3300009413	Deep Ocean	FRMSFYHGLGMFIFGMSAFIIGGIIAWYVINKVTEDDEVEEII*
Ga0114909_11930942	3300009414	Deep Ocean	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKVMEDDEK*
Ga0114932_100292045	3300009481	Deep Subsurface	MTMFHGLGMFMLGMFAIVIGAMIAWYVINKVMKEDEDKK*
Ga0114932_101775702	3300009481	Deep Subsurface	MSFYHGLGMFFLGMGAIIVGGMIAWYIINKVMEDDEVE*
Ga0114932_102067033	3300009481	Deep Subsurface	MSFYHGLGMFIFGMSAFVIGGIIAWYVINKVMEDDDT*
Ga0114932_107143762	3300009481	Deep Subsurface	MTLFHGLGMFILGMFAIIIGGIIAWYIINKVMKDDGR*
Ga0114900_11170602	3300009602	Deep Ocean	MSFYHGLGMFFLGMGAIIVGGIIAWYVINKVMEDDEVE*
Ga0114901_11326812	3300009604	Deep Ocean	MSFYHGLGMFFLGMGAIIIGGIIVWYVINKVMEDDERR*
Ga0114901_11960162	3300009604	Deep Ocean	MSFYHGLGMFCLGMGAIIIGGIIAWYIINKVTEDDEVE*
Ga0114906_10952481	3300009605	Deep Ocean	MSFYHGLGMFFLGMSACIVGGIIAWYIINNVMEGDDS*
Ga0114912_11620462	3300009620	Deep Ocean	MSFYHGLGMFFLGMSAFIIGGIIAWYIINKVMEDDDT*
Ga0114933_100219454	3300009703	Deep Subsurface	MTMYHGLGMFILGMFAIIIGGVIAWYIINKVEKNDEEER*
Ga0114933_100927857	3300009703	Deep Subsurface	MTMFHGLGMFMLGMFAIVIGAMIAWYVINKVMEEDEDKK*
Ga0114933_107700122	3300009703	Deep Subsurface	YEFRMSFYHGLGMFFLGMSAFIIGGIIAWYVINKVMEDDDT*
Ga0114933_108628202	3300009703	Deep Subsurface	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVTEDDEVE*
Ga0098043_11071422	3300010148	Marine	MTMFHGLGMFFLGIGATLIGGLIVWWVINNFVIEDDEKKR*
Ga0114934_103497332	3300011013	Deep Subsurface	MSFYHGLGMFFLGMGAIIVGGMIAWYIINKVMEDDDT*
Ga0114934_104301652	3300011013	Deep Subsurface	MTMYHGLGMFMLGMFAIVIGAMFAWYVINKVMKEDEDKK*
Ga0160423_102042292	3300012920	Surface Seawater	MSFYHGLGMFFFGMGAFIVGAIVAYYIINKVVGDDEEIR*
Ga0163180_112010001	3300012952	Seawater	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDENNNDN*
Ga0163179_104210613	3300012953	Seawater	MSFYHGLGMFILGMGAIIIGGIIAWYIINKVMEDDDT*
Ga0163179_104505394	3300012953	Seawater	MSFYHGLGMFFLGMGAIIVGGMIAWYVISKVMEDDEKK*
Ga0163179_108578312	3300012953	Seawater	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDD
Ga0163179_121188102	3300012953	Seawater	MTMYHGLGMFILGMFAIIIGGMIAWYVINKVVKDDEEK*
Ga0181403_10252251	3300017710	Seawater	MSFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEEDDKE
Ga0181391_11252721	3300017713	Seawater	MSFYHGLGMFFLGMGAIIVGGMVAWYVINKVMEDDENNNN
Ga0181383_10374904	3300017720	Seawater	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVMEDDEVE
Ga0181373_10052401	3300017721	Marine	FRMSFYHGLGMFFLGMGAIIIGGIIAWYIINKVTEDNDT
Ga0181396_10706092	3300017729	Seawater	MSFYYGLGMFFFGMGAIIIGGIIAWYVINKVMEDDERR
Ga0181418_10534444	3300017740	Seawater	MSFYHGLGMFFLGMGVIIIGGIIAWYVINKVMEDDERR
Ga0181421_10380492	3300017741	Seawater	MSFYHGLGMFFLGMSAFVIGGIIAWYVINKVMEDDEVE
Ga0181405_11213072	3300017750	Seawater	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKFMENDEVE
Ga0181411_10550645	3300017755	Seawater	MSFYHGLGMFFLGMGAIIVGALITWYVINKVMEDDEKK
Ga0181411_11612732	3300017755	Seawater	MSFYHGLGMFIFGMSAFVIGGIIAWYVINKVMEDDEVE
Ga0181382_10418336	3300017756	Seawater	MSFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDERR
Ga0181409_10706703	3300017758	Seawater	MSFYHGLGMFFLGMGAIIVGGMIAWYIINKVMEDDEKK
Ga0181385_11020192	3300017764	Seawater	MSFYYGLGMFFFGMGAIIIGGIIAWYVINKVMEDDDT
Ga0181385_11104754	3300017764	Seawater	MTMYHGLGMFILGMFAIIVGGMIAWYIINEVMKDDEEK
Ga0181385_11851512	3300017764	Seawater	MTMFHGLGMFILGMFAIIIGGVIAWYIINKVEKNNEEER
Ga0187221_11186862	3300017769	Seawater	SFYHGLGMFFLGMGVIIIGGIIAWYVINKVMEDDEVE
Ga0187217_12575632	3300017770	Seawater	GGYEFRMSFYHGLGMFFLGMGAIIVGGIIAWYVINKVMEDDERR
Ga0181425_12171752	3300017771	Seawater	MSFYYGLGMFFFGMGAIIIGGIIAWYVINKYIDNDDI
Ga0181386_10311124	3300017773	Seawater	MTMFHGLGMFILGMFAIIIGGVIAWYIINKVVKDDEEK
Ga0211699_100636641	3300020410	Marine	MTFYHGLGMFFLGMGAIIIGAFIAYFIINEVMKDDEEK
Ga0211516_104980621	3300020413	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKVMEDDEVE
Ga0211512_100438771	3300020419	Marine	MTFYHGLGMFFLGMGAIIVGGIIAWYVINKVMEDDENNSDN
Ga0211708_101043613	3300020436	Marine	MTMYHGLGMFILGMFAIIIGGMTAWYIINKVMEEKKEKTRWDDLE
Ga0211545_105432472	3300020452	Marine	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVTEDDDT
Ga0211548_104888942	3300020454	Marine	MTMFHGLGMFILGMFAIIIGGVIAWYIINEVEKNDEEER
Ga0211548_105762861	3300020454	Marine	GGYEFRMSFYHGLGMFILGMGAIIIGGIIAWYIINKVMEDDDT
Ga0211548_105883932	3300020454	Marine	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDENNNDN
Ga0211676_102107723	3300020463	Marine	MTFYHGLGMFFLGMGAIIVGGMIAWYIINKVMEDDENNSDN
Ga0211547_106711652	3300020474	Marine	MYMIGVQFRMTMFHGLGMFILGMFAIIIGGMIAWYVINKVMKDDEEK
Ga0224906_100438217	3300022074	Seawater	MTMYHGLGMFILGMFAIIIGGVIAWYIINKVGENDEKK
Ga0224906_10338292	3300022074	Seawater	MSFYDGLGMFFLGMGAIIVGALITWYVINKVMEDDEKK
Ga0224906_10539892	3300022074	Seawater	MSFYHGLGMFFLGMGVIIIGGIIAWYVINKVMEDNEVE
Ga0224906_11178162	3300022074	Seawater	MSFYHGLGMFFLGMGVIIIGGIIAWYVINKVMEDDEVE
Ga0209992_101042782	3300024344	Deep Subsurface	MTMYHGLGMFILGMFAIIIGGVIAWYIINKVEKNDEEER
Ga0209992_102433262	3300024344	Deep Subsurface	MSFYHGLGMFFLGMGAIIIGGIIAWYVINKVMEDDDT
Ga0209992_103981342	3300024344	Deep Subsurface	MTLFHGLGMFILGMFAIIIGGIIAWYIINKVMKDDGR
Ga0209348_10034912	3300025127	Marine	MTMYHGLGMFILGMFAIIIGGVIAWYIINKVEKNNEEER
Ga0209348_10102274	3300025127	Marine	MYMIGVQFRMTMYHGLGMFILGMFAIIIGGVIAWYIINKVEKNNEEE
Ga0209348_10223315	3300025127	Marine	MTMFHGLGMFILGMFAIIVGGMIAWYVINKVMKEYEKK
Ga0209348_10595223	3300025127	Marine	MSFYDGLGMFFFSMGALIVGALITWYVINKVMEDDEKK
Ga0209348_10707262	3300025127	Marine	MTMFHGLGMFILGMFAIIIGGVIAWYIINKVEKNDKK
Ga0208919_11070092	3300025128	Marine	MTMFHGLGMFILGMFAIIVGGMIAWYVINKVEKNDGR
Ga0208919_11113202	3300025128	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVTEDNDT
Ga0208919_12431142	3300025128	Marine	MSFYYGLGMFFLGMGAIIVGGMIAWYIINKVMEDDEVE
Ga0209232_10227696	3300025132	Marine	MTFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDENNSDN
Ga0209232_10240852	3300025132	Marine	MSFYDGLGMFFLGMGAIIVGALIVWYVINNYVDNDEDNNN
Ga0209232_10681383	3300025132	Marine	MTMYHGLGMFILGMFAIIIGGIITWYIINKVEKNDEEER
Ga0209232_10743024	3300025132	Marine	MTMYHGLGMFILGMFAIIIGGMIAWYIINKVMKDDEEK
Ga0209232_10950173	3300025132	Marine	MSFYHGLGMFFLGMGAIIVGGMIAWYVINKVMEDDEKK
Ga0209232_11454963	3300025132	Marine	MYHGLGMFILGMFAIIIGGVIAWYIINKVGENDEKK
Ga0209232_11746141	3300025132	Marine	MFHGLGMFILGMFAIIIGGVIAWYIINKVEKNDKK
Ga0209232_11751782	3300025132	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVMEDD
Ga0209232_11943891	3300025132	Marine	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVMEDDDT
Ga0208182_10496664	3300025251	Deep Ocean	MSFYHGLGMFFLGMGAIIIGGIIAWYIINKVMEDDEK
Ga0208179_10519432	3300025267	Deep Ocean	MSFYHGLSMFFLGMGVIIIGGMIAWYVINKVTEDDDT
Ga0208450_11405281	3300025301	Deep Ocean	MSFYHGLGMFFLGMGAIIIGGIIVWYVINKVMEDDERR
Ga0256382_10032996	3300028022	Seawater	MTMFHGLGMFMLGMFAIVIGAMIAWYVINKVMKEDEDKK
Ga0183683_10119553	3300029309	Marine	MTMFHGLGMFFLGIGATLIGGLIVWWVINNFVIEDDEKKR
Ga0183748_10379692	3300029319	Marine	MTFYHGLGMFILGMFAIIIGGMIAWYIINKIGGKNETKS
Ga0183748_10706752	3300029319	Marine	MSFYHGLGMFILGMSAIIIGGIITWYIINKVMDKNEME
Ga0183755_10294363	3300029448	Marine	MTFHYGLGMFFLGMGVIIVGGLIAFYVINKFIDNDKK
Ga0183757_100161126	3300029787	Marine	MTMFHGLGMFILGMFAIIIGGMIAWYIINKVEKNDKEER
Ga0183757_10410673	3300029787	Marine	MSFYHGLGMFFLGMGTIIIGGMIAWYVINKVMEDDERR
Ga0183757_10657412	3300029787	Marine	MSFYHGLGMFIFGMSAFIIGGIIAWYVINKVTEDDEVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences