Metagenome Family F090266

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090266
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	63 residues
Representative Sequence	KEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.19 %
% of genes near scaffold ends (potentially truncated)	24.07 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (62.037 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (42.593 % of family members)
Environment Ontology (ENVO)	Unclassified (87.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.037 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI24003J15210_100723982 2JGI25127J35165_10145289 3JGI25127J35165_10322753 4JGI25127J35165_10766901 5JGI25132J35274_10378742 6JGI25132J35274_10456371 7JGI25132J35274_10492862 8JGI25128J35275_10335942 9JGI25128J35275_10407562 10JGI26273J51734_100939783 11Ga0098038_10158614 12Ga0098038_10805603 13Ga0098038_10970533 14Ga0098038_12969642 15Ga0098037_10486642 16Ga0098042_10201763 17Ga0098042_10814282 18Ga0098042_10904862 19Ga0098044_13395841 20Ga0098060_10470713 21Ga0098060_10645934 22Ga0098053_11284601 23Ga0098051_100574216 24Ga0070747_12704762 25Ga0099849_12784893 26Ga0102861_11676242 27Ga0105741_11849922 28Ga0105745_12372592 29Ga0105748_103459963 30Ga0102810_12365011 31Ga0102811_12607033 32Ga0102815_101528443 33Ga0098043_11058542 34Ga0098061_10249193 35Ga0098059_12680361 36Ga0098047_100235051 37Ga0160423_104246272 38Ga0160423_109668652 39Ga0163110_110591101 40Ga0163110_112835821 41Ga0163109_113199001 42Ga0163111_103890652 43Ga0181377_100039525 44Ga0181369_10240195 45Ga0181387_10663403 46Ga0181391_10975051 47Ga0181391_11395392 48Ga0181375_10768042 49Ga0181373_10398394 50Ga0181373_10908582 51Ga0181388_10975713 52Ga0181398_11671282 53Ga0181401_10671924 54Ga0181401_10738593 55Ga0181401_11346223 56Ga0181417_11566352 57Ga0181433_10610333 58Ga0181427_11480933 59Ga0181393_11368691 60Ga0181392_11789821 61Ga0181405_11790022 62Ga0181420_11128052 63Ga0181420_12384932 64Ga0181408_11580453 65Ga0181413_11905743 66Ga0187220_11518971 67Ga0187221_10742304 68Ga0181395_11806691 69Ga0211677_101389894 70Ga0211577_107860363 71Ga0222717_1000223341 72Ga0222717_106997282 73Ga0224906_10423396 74Ga0233406_100244253 75Ga0233432_102151644 76Ga0233432_102228464 77Ga0233411_102144422 78Ga0233405_100149754 79Ga0233410_102548802 80Ga0255039_104372122 81Ga0228665_10393563 82Ga0228676_11239221 83Ga0233438_103768563 84Ga0228654_10783231 85Ga0208667_100019110 86Ga0208667_10519553 87Ga0208667_10713292 88Ga0208791_100501314 89Ga0208157_10251603 90Ga0208157_11089292 91Ga0208434_10604534 92Ga0208669_10644932 93Ga0209535_10343825 94Ga0209535_12043822 95Ga0209535_12196682 96Ga0209348_10646402 97Ga0209348_11044751 98Ga0209232_12057152 99Ga0209645_11075231 100Ga0208134_11160983 101Ga0233413_102509282 102Ga0233414_103277093 103Ga0257126_11612813 104Ga0183757_10152336 105Ga0315322_102043066 106Ga0315320_109037992 107Ga0315321_107691551 108Ga0316203_11051152
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI24003J15210_100723982 2JGI25132J35274_10378742 3JGI25132J35274_10456371 4Ga0098042_10201763 5Ga0098044_13395841 6Ga0098060_10470713 7Ga0099849_12784893 8Ga0181401_10671924 9Ga0181395_11806691 10Ga0224906_10423396 11Ga0233411_102144422
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0315322_102043066 2JGI25127J35165_10145289 3Ga0098038_12969642 4Ga0098042_10201763 5Ga0098053_11284601 6Ga0099849_12784893 7Ga0098047_100235051 8Ga0163110_112835821 9Ga0181369_10240195 10Ga0181373_10908582 11Ga0181401_10671924 12Ga0181401_10738593 13Ga0181420_12384932 14Ga0187220_11518971 15Ga0211677_101389894 16Ga0224906_10423396 17Ga0233406_100244253 18Ga0233411_102144422 19Ga0208669_10644932 20Ga0183757_10152336
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.19% β-sheet: 42.55% Coil/Unstructured: 54.26%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
b.38.3.1: GatD N-terminal domain-like	d1zq1a1	1zq1	0.74553
b.38.1.0: automated matches	d4c92d_	4c92	0.69773
b.38.1.0: automated matches	d4f7ug_	4f7u	0.68887
b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP	d4f7ua_	4f7u	0.6881
b.38.1.2: Pleiotropic translational regulator Hfq	d2ylba_	2ylb	0.67861

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF10504	DUF2452	1.85
PF00551	Formyl_trans_N	0.93
PF02867	Ribonuc_red_lgC	0.93
PF06745	ATPase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	37.96 %
Unclassified	root	N/A	62.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	25.93 %
Unclassified	root	N/A	62.04 %
Viruses	superkingdom	All Organisms → Viruses	12.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.22 %
Unclassified	root	N/A	62.04 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	21.30 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.93 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	21.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.04 %
Unclassified	root	N/A	62.04 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300023085\|Ga0233406_10024425	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	771	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10215164	Not Available	946	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10222846	Not Available	922	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10214442	Not Available	637	Open in IMG/M
(restricted) 3300023114\|Ga0233405_10014975	All Organisms → Viruses → Predicted Viral	1055	Open in IMG/M
(restricted) 3300023276\|Ga0233410_10254880	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	569	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10437212	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	568	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10376856	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	523	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10250928	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	753	Open in IMG/M
(restricted) 3300028045\|Ga0233414_10327709	Not Available	705	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	9.26%
Inlet	Environmental → Aquatic → Marine → Inlet	9.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.41%
Oceanic	Environmental → Aquatic → Marine → Oceanic	48.15%
Strait	Environmental → Aquatic → Marine → Strait	21.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.63%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.70%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.56%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	42.59%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	21.30%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	9.26%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.70%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	42.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.78%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	21.30%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	8.33%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.78%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.78%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	5.56%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24003J15210_100723982	3300001460	Marine	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVGVVPF*
JGI25127J35165_10145289	3300002482	Marine	LVMQMKEIEKGDWIYVECKDKDGNVYSEEGSVVSIDEEEVNMFDGKEGWSVDRKEIVSVVPF*
JGI25127J35165_10322753	3300002482	Marine	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
JGI25127J35165_10766901	3300002482	Marine	MQMKEIEKGDWIYVECKDEDGNVYSEEGCVVSIDEEEVNMFDGKEGWSVDRKEIVSVVPF
JGI25132J35274_10378742	3300002483	Marine	MKEIEKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF*
JGI25132J35274_10456371	3300002483	Marine	MRKLMIEDKEVEKGDWIYVECKDEIGDVYSEEGSVVDINDEEIYMFDGKEGWTVDRSEIVKVDWKFWG*
JGI25132J35274_10492862	3300002483	Marine	MKEIKKGDWIYVECKDKDGEVYSEEGCVVSIDDEEVNMFDGKEGWSVDXKEIVSVVPF*
JGI25128J35275_10335942	3300002488	Marine	MKEIEKGDWIYVECKDEDGNVYSEEGCVVSIDEEEVNMFDGKEGWSVDRKEIVSVVPF*
JGI25128J35275_10407562	3300002488	Marine	MQMKEIEKGDWIYVECKDKDGNVYSEEGSVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF
JGI26273J51734_100939783	3300003620	Marine	MKEKEMMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS*
Ga0098038_10158614	3300006735	Marine	MKEIKIEGKDVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF*
Ga0098038_10805603	3300006735	Marine	MKEIKKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEVVSVVPF*
Ga0098038_10970533	3300006735	Marine	MKEIKIEGKEVVKGDWIYVECKDEDGEVYSEEGCVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0098038_12969642	3300006735	Marine	MKEIKIEGKEVVKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRREVVSVVPF*
Ga0098037_10486642	3300006737	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF*
Ga0098042_10201763	3300006749	Marine	MKEKQIDGLLVAGKEVVKGDWIYVECKDEDGNLYSEEGNVVFIDDEEVGMFDGKEGWSVKREEIMNVVPF*
Ga0098042_10814282	3300006749	Marine	MKEIKKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWCVDRKEVVSVVPF*
Ga0098042_10904862	3300006749	Marine	MKEIKKGDWIYVECKSIEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF*
Ga0098044_13395841	3300006754	Marine	IEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKKEEIVSVVPF
Ga0098060_10470713	3300006921	Marine	MKVSVKFEDKIVGEGDWIYVECKDKDGFVYSEEGCVVDIDDEEVQMYDGNEGWSVKREEIVSVRWK*
Ga0098060_10645934	3300006921	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKREEIVNVVPF*
Ga0098053_11284601	3300006923	Marine	MKEKQIEGLLVGGKEVVKGDWIYVECKDKDGNVYSEEGSVVSIDDEEVNMFDGKEGWSVNRKEIVSVVPF*
Ga0098051_100574216	3300006924	Marine	MMIDGKKVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF*
Ga0070747_12704762	3300007276	Aqueous	MKEIKIEGKEVVKGDWIYVECKDKDGDVYSEEGSVVDIDEEEVQMFDGKEGWSVKREEIVSVVPF*
Ga0099849_12784893	3300007539	Aqueous	MKEMKIEGVEVKVGDWIYVECKDKDGVVYSEEGSVVDIDDEEVQMFDGKEGWSVKREEIVKIGWQFWG*
Ga0102861_11676242	3300007544	Estuarine	MKEMMIDGKKVVKGDWIYVECKDNDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0105741_11849922	3300007956	Estuary Water	MKEKEMMIDGWKVVKGDWICVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0105745_12372592	3300007972	Estuary Water	MKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0105748_103459963	3300007992	Estuary Water	MKEKEMMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVGVVPF*
Ga0102810_12365011	3300009002	Estuarine	MKEKEMMIDGKKVVKGDWIYVECKDNDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0102811_12607033	3300009024	Estuarine	MKEKEMMIDSKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF*
Ga0102815_101528443	3300009080	Estuarine	MKEKEMMIDGKKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVGVVPF*
Ga0098043_11058542	3300010148	Marine	MQMKEIKKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEVVSVVPF
Ga0098061_10249193	3300010151	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKKEEIVNVVPF*
Ga0098059_12680361	3300010153	Marine	MQMKEIKKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF
Ga0098047_100235051	3300010155	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVQMYDGIEGWSVDREEIVSAR*
Ga0160423_104246272	3300012920	Surface Seawater	MQMKEIKKGDWIYVECKDKDGEVYSEEGCVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0160423_109668652	3300012920	Surface Seawater	MQMKEIKKGDWIYVECKSIEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDR
Ga0163110_110591101	3300012928	Surface Seawater	MQMKEIKKGDWIYVECKSIEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEVVSVVPF*
Ga0163110_112835821	3300012928	Surface Seawater	IIEEMRKLMIEDKEVEKGDWIYVECKDEIGDVYSEEGSVVDINDEEIYMFDGKEGWTVDRSEIVKVDWKFWG*
Ga0163109_113199001	3300012936	Surface Seawater	MQMKEIKKGDWIYVECKDKDGEVYSEEGCVVSIDDEEVNMFDGKEGWSVDRKEIVSV
Ga0163111_103890652	3300012954	Surface Seawater	MQMKEIKKGDWIYVECKSIEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF*
Ga0181377_100039525	3300017706	Marine	MKEIKIEGEVVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVAMFDGKEGWSVKREEIVSVVPF
Ga0181369_10240195	3300017708	Marine	MKEIKIEGKEVEKGDWIYVECKDKYGERYSEEGSVVSIDDEEINMFDGKEGWSVKREEIVNVVPF
Ga0181387_10663403	3300017709	Seawater	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181391_10975051	3300017713	Seawater	KRKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181391_11395392	3300017713	Seawater	MKEIKKGDWIYVECKDKDGNVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181375_10768042	3300017718	Marine	EIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF
Ga0181373_10398394	3300017721	Marine	IEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF
Ga0181373_10908582	3300017721	Marine	MKEIKIEGEEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKREEIVSVVPF
Ga0181388_10975713	3300017724	Seawater	MKEIKIEGKEVVKGDWIYVECKDKDGDVYSEEGSVVDIDDEEINMFDGKEGWSVDRGEVVKIDWKFWG
Ga0181398_11671282	3300017725	Seawater	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVNVVPF
Ga0181401_10671924	3300017727	Seawater	MKEIKKGDWISVKCEGEGNVYYEDGCVVGVDEEEVMMFDGKEGWSVDREEIVEVSWK
Ga0181401_10738593	3300017727	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVDIDDEEINMFDGKEGWSVDREEVVKIDWKFWG
Ga0181401_11346223	3300017727	Seawater	MIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVP
Ga0181417_11566352	3300017730	Seawater	MKEKEMMIDGKEVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDREEVVKIDWKFWG
Ga0181433_10610333	3300017739	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEINMFDGKEGWSVDRKEIVSVVPF
Ga0181427_11480933	3300017745	Seawater	WIYVECKDKDGNVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181393_11368691	3300017748	Seawater	MMIDGKEVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181392_11789821	3300017749	Seawater	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSVDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181405_11790022	3300017750	Seawater	EKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181420_11128052	3300017757	Seawater	MKEIEKGDWIYVECKDEDGNVYSEEGCVVSIDEEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181420_12384932	3300017757	Seawater	MQEIKIEGKKVVEGDWIYVECKDKDGFAYSEEGSVVDLDDEEVQMYDGKEGWSVVREEIVSVRWM
Ga0181408_11580453	3300017760	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVS
Ga0181413_11905743	3300017765	Seawater	GMKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0187220_11518971	3300017768	Seawater	RRKGIKIEGKEVVKGDWIYDECKDKDGDVYSEEGSVVDIDDEEINMFDGKEGWSVDREEVVKIDWKFWG
Ga0187221_10742304	3300017769	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVDIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0181395_11806691	3300017779	Seawater	MKEIKKGDWIYVECKDKDGNVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVS
Ga0211677_101389894	3300020385	Marine	MKEIKIEGEEVVKGDWIYVKCKDKDGDVYSEEGCVVSIDEEEVNMFDGKEGWSVDREEIEWVEVFPF
Ga0211577_107860363	3300020469	Marine	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIV
Ga0222717_1000223341	3300021957	Estuarine Water	MKEKEMMIDGKKVVKGDWICVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0222717_106997282	3300021957	Estuarine Water	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0224906_10423396	3300022074	Seawater	MIEIKIEGKEVVEGHWIYVECKDEDGNVYSEEGCVVSIDDEDVQMWGDGEGWSVDREEIVSVRWM
(restricted) Ga0233406_100244253	3300023085	Seawater	MKEKEMMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWN
(restricted) Ga0233432_102151644	3300023109	Seawater	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
(restricted) Ga0233432_102228464	3300023109	Seawater	MMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS
(restricted) Ga0233411_102144422	3300023112	Seawater	MKEIKIDGRKVVEGDWIYVECKDENGFAYSEEGTVVDIDDEVVQMFDGKEGWSVDRKDIVEVEWVFWS
(restricted) Ga0233405_100149754	3300023114	Seawater	MMIDGKKVVKGDWICVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS
(restricted) Ga0233410_102548802	3300023276	Seawater	MMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS
(restricted) Ga0255039_104372122	3300024062	Seawater	MEEKEIMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0228665_10393563	3300024235	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0228676_11239221	3300024248	Seawater	MKEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKE
(restricted) Ga0233438_103768563	3300024255	Seawater	MKEKEMMIGERKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKE
Ga0228654_10783231	3300024316	Seawater	IDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0208667_100019110	3300025070	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF
Ga0208667_10519553	3300025070	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKKEEIVSVVPF
Ga0208667_10713292	3300025070	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEINMFDGKEGWSVKREEIVNVVPF
Ga0208791_100501314	3300025083	Marine	MMIDGKKVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEVGMFDGKEGWSVKREEIVSVVPF
Ga0208157_10251603	3300025086	Marine	MKEIKKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEVVSVVPF
Ga0208157_11089292	3300025086	Marine	MKEIKIEGKEVVKGDWIYVECKDEDGEVYSEEGCVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0208434_10604534	3300025098	Marine	MKEIKIEGKEVVKGDWIYVECKDKDGEVYSEEGSVVFIDDEEIGMFDGKEGWSVKR
Ga0208669_10644932	3300025099	Marine	MKVSVKFEDKIVGEGDWIYVECKDKDGFVYSEEGCVVDIDDEEVQMYDGNEGWSVKREEIVSVRWK
Ga0209535_10343825	3300025120	Marine	MKEKEMMIDGWKVVKGDWICVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVGVVPF
Ga0209535_12043822	3300025120	Marine	MKEKEMMIDGKKVVKGDWIYVECKDNDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0209535_12196682	3300025120	Marine	MKEIKIDGRQVVEGDWIYVECKDEDGFAYSEEGTVVDIDDEEVQMFDGKEGWSVDRKDIVEVDWVFWS
Ga0209348_10646402	3300025127	Marine	MQMKEIEKGDWIYVECKDKDGNVYSEEGSVVSIDEEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0209348_11044751	3300025127	Marine	MMIDGKKVIKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0209232_12057152	3300025132	Marine	MKEIEKGDWIYVECKDEDGEVYSEEGCVVSIDEEEINMFDGKEGWSVDRKEIVSVVPF
Ga0209645_11075231	3300025151	Marine	MIEDKEVEKGDWIYVECKDEIGDVYSEEGSVVDINDEEIYMFDGKEGWTVDRSEIVKVDWKFWG
Ga0208134_11160983	3300025652	Aqueous	MKEIKIEGKEVVKGDWIYVECKDKDGDVYSEEGSVVDIDEEEVQMFDGKEGWSVKREEIVSVVPF
(restricted) Ga0233413_102509282	3300027996	Seawater	MKEKEMMIGERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS
(restricted) Ga0233414_103277093	3300028045	Seawater	MKEIKIDGRKVVEGDWIYVECKDKDGVAYSEEGTVVDIDDEEVQMFDGKEGWSVDRKDIVEVDWVFWS
Ga0257126_11612813	3300028287	Marine	MKEKEMMIDERKVVKGDWIYVECKDKDGVVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKDIVEVDWVFWS
Ga0183757_10152336	3300029787	Marine	MIEDKEVEKGDWIYVECKDKDGDVYSEEGSVVSIDDEEINMFDGKEGWSVKREEIVSVVP
Ga0315322_102043066	3300031766	Seawater	KEKEMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVVSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0315320_109037992	3300031851	Seawater	MKEIKIEGKEVVKGDWIYVECKDKDGDVYSEEGSVVDIDDEEINMFDGKEGWSVDREEVVKIDWKFWG
Ga0315321_107691551	3300032088	Seawater	EMMIDGKKVVKGDWIYVECKDKDGDVYSEEGSVLSIDDEEVNMFDGKEGWSVDRKEIVSVVPF
Ga0316203_11051152	3300032274	Microbial Mat	MKEIKIEGKEVVKGDWIYVECKDKDGDVYSEEGSVVSIDDDEINMFDGKEGWSVKREEIVSVVPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters