Metagenome Family F090259

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090259
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	74 residues
Representative Sequence	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDKSFLKFLELADAS
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.41 %
% of genes near scaffold ends (potentially truncated)	15.74 %
% of genes from short scaffolds (< 2000 bps)	75.93 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (42.593 % of family members)
Environment Ontology (ENVO)	Unclassified (76.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.519 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.83% β-sheet: 31.68% Coil/Unstructured: 51.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
b.34.1.2: C-terminal domain of transcriptional repressors	d6e55a1	6e55	0.63
b.34.1.2: C-terminal domain of transcriptional repressors	d6e55a1	6e55	0.63
b.34.9.0: Tudor/PWWP/MBT	d2l89a_	2l89	0.59
b.34.9.0: Tudor/PWWP/MBT	d2l89a_	2l89	0.59
e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain	d4ogca4	4ogc	0.58
e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain	d4ogca4	4ogc	0.58
d.3.1.3: Cysteine proteinases	d1tl9a_	1tl9	0.57
b.34.11.0: Prokaryotic SH3-related domain	d2hbwa1	2hbw	0.57
d.3.1.3: Cysteine proteinases	d1tl9a_	1tl9	0.57
b.34.11.0: Prokaryotic SH3-related domain	d2hbwa1	2hbw	0.57

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF05728	UPF0227	2.78
PF01541	GIY-YIG	1.85
PF11753	DUF3310	0.93
PF07728	AAA_5	0.93
PF00293	NUDIX	0.93
PF09834	DUF2061	0.93
PF00691	OmpA	0.93
PF03332	PMM	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.89 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.07 %
Viruses	superkingdom	All Organisms → Viruses	14.81 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.85 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	56.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.85 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.78 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	1.85 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Methylococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.78 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	1.85 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Methylococcaceae bacterium TMED69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	2.78 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.85 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Methylococcaceae bacterium TMED69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.81 %
Unclassified	root	N/A	11.11 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2.78 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.85 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002242\|KVWGV2_10844356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	727	Open in IMG/M
3300002514\|JGI25133J35611_10004135	Not Available	7117	Open in IMG/M
3300002514\|JGI25133J35611_10046116	All Organisms → Viruses → Predicted Viral	1504	Open in IMG/M
3300002519\|JGI25130J35507_1014186	Not Available	1942	Open in IMG/M
3300002519\|JGI25130J35507_1046753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	872	Open in IMG/M
3300003147\|Ga0052235_1014797	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300006735\|Ga0098038_1066832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1277	Open in IMG/M
3300006735\|Ga0098038_1079958	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300006736\|Ga0098033_1031490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1606	Open in IMG/M
3300006736\|Ga0098033_1039260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1413	Open in IMG/M
3300006736\|Ga0098033_1170261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	607	Open in IMG/M
3300006737\|Ga0098037_1149993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	783	Open in IMG/M
3300006738\|Ga0098035_1196879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	673	Open in IMG/M
3300006750\|Ga0098058_1190760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	535	Open in IMG/M
3300006751\|Ga0098040_1099604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	876	Open in IMG/M
3300006751\|Ga0098040_1199101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	585	Open in IMG/M
3300006753\|Ga0098039_1008372	Not Available	3852	Open in IMG/M
3300006789\|Ga0098054_1212743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	703	Open in IMG/M
3300006790\|Ga0098074_1118238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	693	Open in IMG/M
3300006793\|Ga0098055_1115489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1044	Open in IMG/M
3300006928\|Ga0098041_1232921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	588	Open in IMG/M
3300006929\|Ga0098036_1167257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	670	Open in IMG/M
3300006929\|Ga0098036_1194762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	616	Open in IMG/M
3300007963\|Ga0110931_1053395	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300008050\|Ga0098052_1195393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	788	Open in IMG/M
3300008952\|Ga0115651_1042121	All Organisms → Viruses → Predicted Viral	3759	Open in IMG/M
3300009481\|Ga0114932_10476600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	736	Open in IMG/M
3300009593\|Ga0115011_10011916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5789	Open in IMG/M
3300009593\|Ga0115011_10263506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1297	Open in IMG/M
3300009593\|Ga0115011_11716676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	563	Open in IMG/M
3300009790\|Ga0115012_11040410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	679	Open in IMG/M
3300010150\|Ga0098056_1223064	Not Available	627	Open in IMG/M
3300010150\|Ga0098056_1283393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	547	Open in IMG/M
3300011013\|Ga0114934_10157862	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300012928\|Ga0163110_10140517	All Organisms → Viruses → Predicted Viral	1662	Open in IMG/M
3300012950\|Ga0163108_10095019	All Organisms → Viruses → Predicted Viral	1897	Open in IMG/M
3300012952\|Ga0163180_10098146	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300012953\|Ga0163179_10000731	All Organisms → cellular organisms → Bacteria	23362	Open in IMG/M
3300012953\|Ga0163179_10001118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	19069	Open in IMG/M
3300012953\|Ga0163179_10019454	All Organisms → Viruses → Predicted Viral	4488	Open in IMG/M
3300012953\|Ga0163179_10189951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1565	Open in IMG/M
3300013115\|Ga0171651_1015476	All Organisms → Viruses → Predicted Viral	2774	Open in IMG/M
3300017702\|Ga0181374_1003145	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3143	Open in IMG/M
3300017704\|Ga0181371_1066930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	582	Open in IMG/M
3300017718\|Ga0181375_1072095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	564	Open in IMG/M
3300017720\|Ga0181383_1002257	All Organisms → cellular organisms → Bacteria → Proteobacteria	5473	Open in IMG/M
3300017764\|Ga0181385_1002335	All Organisms → cellular organisms → Bacteria → Proteobacteria	6605	Open in IMG/M
3300017764\|Ga0181385_1043038	All Organisms → Viruses → Predicted Viral	1413	Open in IMG/M
3300017764\|Ga0181385_1079556	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300017764\|Ga0181385_1168337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	663	Open in IMG/M
3300017768\|Ga0187220_1227133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	560	Open in IMG/M
3300020380\|Ga0211498_10252657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	666	Open in IMG/M
3300020394\|Ga0211497_10002229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12843	Open in IMG/M
3300020395\|Ga0211705_10151923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	846	Open in IMG/M
3300020403\|Ga0211532_10073086	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300020403\|Ga0211532_10073817	All Organisms → Viruses → Predicted Viral	1522	Open in IMG/M
3300020410\|Ga0211699_10066100	Not Available	1337	Open in IMG/M
3300020410\|Ga0211699_10303069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	623	Open in IMG/M
3300020411\|Ga0211587_10000291	Not Available	35098	Open in IMG/M
3300020411\|Ga0211587_10387856	Not Available	567	Open in IMG/M
3300020411\|Ga0211587_10403712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	554	Open in IMG/M
3300020413\|Ga0211516_10204577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	906	Open in IMG/M
3300020413\|Ga0211516_10276263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	758	Open in IMG/M
3300020428\|Ga0211521_10000742	Not Available	27659	Open in IMG/M
3300020428\|Ga0211521_10012246	All Organisms → cellular organisms → Bacteria → Proteobacteria	5261	Open in IMG/M
3300020430\|Ga0211622_10000435	All Organisms → cellular organisms → Bacteria	48739	Open in IMG/M
3300020430\|Ga0211622_10018159	All Organisms → Viruses → Predicted Viral	3466	Open in IMG/M
3300020430\|Ga0211622_10030823	Not Available	2482	Open in IMG/M
3300020430\|Ga0211622_10059566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1681	Open in IMG/M
3300020462\|Ga0211546_10587223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	561	Open in IMG/M
3300020470\|Ga0211543_10075217	All Organisms → Viruses → Predicted Viral	1748	Open in IMG/M
3300020470\|Ga0211543_10156213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1143	Open in IMG/M
3300020471\|Ga0211614_10005270	All Organisms → cellular organisms → Bacteria → Proteobacteria	5448	Open in IMG/M
3300020471\|Ga0211614_10094074	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300020473\|Ga0211625_10036656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	3167	Open in IMG/M
3300020473\|Ga0211625_10041533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	2915	Open in IMG/M
3300020474\|Ga0211547_10200204	All Organisms → Viruses → Predicted Viral	1026	Open in IMG/M
3300020477\|Ga0211585_10247531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1096	Open in IMG/M
3300020478\|Ga0211503_10426283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	708	Open in IMG/M
3300020595\|Ga0206126_10510282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	516	Open in IMG/M
3300021379\|Ga0213864_10077559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1625	Open in IMG/M
3300025078\|Ga0208668_1005904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	2838	Open in IMG/M
3300025082\|Ga0208156_1084383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	589	Open in IMG/M
3300025096\|Ga0208011_1017139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1905	Open in IMG/M
3300025102\|Ga0208666_1026850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1773	Open in IMG/M
3300025112\|Ga0209349_1019122	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2451	Open in IMG/M
3300025122\|Ga0209434_1046545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1355	Open in IMG/M
3300025131\|Ga0209128_1069448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1216	Open in IMG/M
3300025131\|Ga0209128_1076834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1132	Open in IMG/M
3300025132\|Ga0209232_1067324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1267	Open in IMG/M
3300025151\|Ga0209645_1107100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	900	Open in IMG/M
3300025151\|Ga0209645_1209612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	569	Open in IMG/M
3300025873\|Ga0209757_10104295	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300026134\|Ga0208815_1026995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	745	Open in IMG/M
3300027906\|Ga0209404_10001407	Not Available	16204	Open in IMG/M
3300027906\|Ga0209404_10541719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	774	Open in IMG/M
3300028018\|Ga0256381_1057452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	588	Open in IMG/M
3300028022\|Ga0256382_1073146	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300029319\|Ga0183748_1022217	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2218	Open in IMG/M
3300029319\|Ga0183748_1027485	Not Available	1894	Open in IMG/M
3300029319\|Ga0183748_1044175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1314	Open in IMG/M
3300029319\|Ga0183748_1045448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1284	Open in IMG/M
3300029319\|Ga0183748_1100471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	665	Open in IMG/M
3300029787\|Ga0183757_1003525	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5704	Open in IMG/M
3300031773\|Ga0315332_10626517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	667	Open in IMG/M
3300032011\|Ga0315316_10437434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	1098	Open in IMG/M
3300032073\|Ga0315315_10637124	Not Available	981	Open in IMG/M
3300032073\|Ga0315315_10655081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	31.48%
Strait	Environmental → Aquatic → Marine → Strait	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.70%
Coastal	Environmental → Aquatic → Marine → Coastal	2.78%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.78%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.85%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	48.15%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	31.48%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.70%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.85%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	42.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	31.48%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.56%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.63%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.70%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.78%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.85%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.85%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.93%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300003147	Planktonic microbial communities from North Pacific Subtropical Gyre	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008952	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300013115	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020473	Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026134	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KVWGV2_108443562	3300002242	Marine Sediment	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDQSMLKFLELADASVP*
JGI25133J35611_1000413516	3300002514	Marine	MKIGELYEVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLACVDGEESPAGPY*
JGI25133J35611_100461163	3300002514	Marine	VKVGDLYEVHHKWLLPHSTSDFWSSCGSVLYLGEDTIHRDDGVTITNHAVLVDGQRRILDKSFLRFLEPIDESR*
JGI25130J35507_10141861	3300002519	Marine	MKIGELYEVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLACVDGEESPA
JGI25130J35507_10467532	3300002519	Marine	MKVGELYEVRHRWMLPRSRANFWEDCGLVLYLGEEGLIREDGIKIVNHAVFVKGQRVIIDKTMLKFLELADAS*
Ga0052235_10147977	3300003147	Marine	VKVGKLYEVRHKWLLPHDNREFWSNCGPILYLGEDVIERSDGEHIINHGVLACGEHRILDATFLRLLEPVDEGDQ*
Ga0098038_10668323	3300006735	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDSSFLKFLELADASVP*
Ga0098038_10799582	3300006735	Marine	MKVGELYEVRHKWLLPRSRANFWEDCGAVLYLGEEGLIRDDGTKIVNHVVFVKGRRVIIDQTMLKFLELADAS*
Ga0098033_10314908	3300006736	Marine	MKIGELYEVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLAHVDGEESPAGPY*
Ga0098033_10392601	3300006736	Marine	MKVGELYEVRHRWMLPRSRANFWKDCGLVLYLGEEGLIREDGIKIVNHAVFVKGQRVIIDKTMLKFLELADAS*
Ga0098033_11702612	3300006736	Marine	MKVGDLYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDQSMLKFLEHADAS*
Ga0098037_11499933	3300006737	Marine	VQVGKLYEVRHKWLLPRSRANFWEDCGAVLYLGEEGLIRDDGTKIVNHVVFVKGRRVIIDQTMLKFLELADAS*
Ga0098035_11968792	3300006738	Marine	MKVGDLYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDQSMLKFLELADAS*
Ga0098058_11907602	3300006750	Marine	MKVGDLYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVIIDKSMLKFLELANASVP*
Ga0098040_10996043	3300006751	Marine	MKVGELYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIERHDGTKIVNHAVFVKGQRVILDKSMLKFLELADASVL*
Ga0098040_11991011	3300006751	Marine	MKVGDLYEVRHKWLLPHSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDQSMLKFLELADAS*
Ga0098039_100837215	3300006753	Marine	MKIGELYEVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLA
Ga0098054_12127431	3300006789	Marine	MKVGELYEVRHKWLLPHDRTNFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVIIDKSMLKFLELANASVP*
Ga0098074_11182382	3300006790	Marine	MIVGKLYEVRHKWLLPHSTRDFWSDCGPVLYLGEDVSERDDGARIVNHVVLVKGEKRLLDRTFLKFLKPLTTS*
Ga0098055_11154895	3300006793	Marine	MKVGDLYEVRHKWMLPRSSANFWEDCGAVLYLGEEGLIREDGIKIVNHAVFVKGQRVLLDQSMLKFLELADAS*
Ga0098041_12329213	3300006928	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTKIVNHAVFVKGQRVILDSSFLKFLEL
Ga0098036_11672571	3300006929	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASVP*
Ga0098036_11947623	3300006929	Marine	MKVGELYEVCHTWLLPHSTSDFWSSCGPVLYVGEDVIVNQDGATVVNHVVLAAGQWRVLDKSFLKFLEPIDGDR*
Ga0110931_10533955	3300007963	Marine	MKVGELYEVRHKWLLPISRANFWDDCGAVLYLGEDVIEREDGTKIVNHVVFVKGSRIILDQSMLKFLELADASVS*
Ga0098052_11953933	3300008050	Marine	MKVGELYEVRHKWLLPHDRTNFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVIIDKSMLKFLE
Ga0115651_104212112	3300008952	Marine	MKVGELYTVRHKWMLPRSRANFWEDCGAVLYLGEEGLIREDGIKIVNHAVFVKGQRVILDQSMLKFLELADAS*
Ga0114932_104766002	3300009481	Deep Subsurface	VKVGELYEVRHRWLLPRSSANFWEDCGPVLYLGEDVCYTQDGYKVVNHAVFVKGQRVILDQSMLKFLELADASVP*
Ga0115011_100119168	3300009593	Marine	MKIGELYEIQHKWMLPYSASKFWLDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFLKFLEPLTKT*
Ga0115011_102635064	3300009593	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTKIVNHAVFVKGQRVILDNSFLKFLELADASVS*
Ga0115011_117166761	3300009593	Marine	NIYRVCHKWLLPHSRSEFWSNCGSVLYLGEDIIHRGDGVTVTNHAVLVDGQRRILDKSFLKFLKRFNNGN*
Ga0115012_110404101	3300009790	Marine	MQVGELYEIRHKWLLPHSTRDFWSTCGPVLYLGEDVIEREDGARIVNHAVLVKGQRRILDGSFLKFLEPLTNTLQKNA*
Ga0098056_12230644	3300010150	Marine	GELYTVRHKWMLPRSSANFWEDCGAVLYLGEEGLIREDGIKIVNHAVFVKGQRVLLDQSMLKFLELADAS*
Ga0098056_12833932	3300010150	Marine	MKVGELYEVRHKWLLPHDRTNFWEDCGAVLYLGEDVIVREDGTRIVNHAVFVKGQRVIIDKSMLKFLELADAPVP*
Ga0114934_101578624	3300011013	Deep Subsurface	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASR*
Ga0163110_101405175	3300012928	Surface Seawater	MMKVGSLYEVRHKWLLPRSTSDFWSNCGSVLYLGEDIIHRDDGVTVVNHAVLVDGQRRILDKSFLKFLEPINENG*
Ga0163108_100950192	3300012950	Seawater	MIKGKLYEVRHNWLLPRDNHEFWSTCGPVLYLGEDVIEREDGVRIVNHAVLVKGQRRILDRTFLRFLEPLTNT*
Ga0163180_100981467	3300012952	Seawater	VKVGEIYEVKHKWLLPAGSSDFWSNCGPVLYLGEDIIDRTDGIKIINHVVFVDGETRILDKTFLKFLEVING*
Ga0163179_1000073145	3300012953	Seawater	MEPSLAGREIVKIGKLYQVCHTWLLPHSSAEFWRNCGPVMYIGEDIIRREDGKEIINHAVLVDGKKRIIDRTFLKFLEPLDENG*
Ga0163179_1000111847	3300012953	Seawater	MVKGKLYKVAHNWLLPHSTSGFWSSCGPVLYLGEDVIERDDGVRVVNHAVLVKGERRIVDSSFLKFFEPLTKA*
Ga0163179_1001945415	3300012953	Seawater	MKIGELYEVRHNWLLPRGTNEFWSNCGPVLYLGEDVIERSDGVRIVNHAVLVKGQRRILDGSFLKFLEPLTKA*
Ga0163179_101899514	3300012953	Seawater	VKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASVP*
Ga0171651_10154761	3300013115	Marine	MKVGELYTVRHKWMLPRSRANFWEDCGAVLYLGEEGLIRDDGTKIVNHAVFVKGQRVIIDQTMLKFLE
Ga0181374_100314512	3300017702	Marine	MKVGELYEVRHRWMLPRSRANFWKDCGLVLYLGEEGLIREDGIKIVNHAVFVKGQRVIIDKTMLKYLELADAS
Ga0181371_10669303	3300017704	Marine	MKVGDLYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIERHDGTKIVNHAVFVKGQRVILDKSMLKFLELA
Ga0181375_10720952	3300017718	Marine	MKVGDLYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVLLDQSMLKFLELADAS
Ga0181383_100225714	3300017720	Seawater	MQVGELYEIQHKWMLPYSTSKFWLDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFLKFLEPLTKT
Ga0181385_100233522	3300017764	Seawater	VEVGKLYRVCHRWLLPHGTADFWGNCGPVLYLGEDVLEGEDGSRIVNYAVFVKGQRRLLDRTFLKFLEPIDEKS
Ga0181385_10430381	3300017764	Seawater	VQVGELYEIQHKWMLPYSTSKFWLDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFL
Ga0181385_10795564	3300017764	Seawater	MQVGELYEIQHKWMLPYSTSKFWMDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFL
Ga0181385_11683371	3300017764	Seawater	MMKVGNLYEVRHKWLLPRSTSDFWSSCGSVLYLGEDTIHRDDGVTITNHAVLVDGQRRILDKSFLRFLEPIDESR
Ga0187220_12271331	3300017768	Seawater	VKVGELYEVKHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDKSFLKFLELADASVS
Ga0211498_102526572	3300020380	Marine	VQVGELYEVRHKWMLPHSTREFWSTCGPVLYLGEDVIEREDGVRIVNHAVLVKGQRRILDRSFLKFLEPLTNTLQENA
Ga0211497_1000222933	3300020394	Marine	VQVGELYEVRHKWMLPHSTREFWSTCGPVLYLGEDVIEREDGVRIVNHAVLVKGERRILDRSFLKFLEPLTNTLQENA
Ga0211705_101519232	3300020395	Marine	MKVGELYQVCHKWLLPHSLSDFWSSCGPVLYLGEDVIEREDGAKIVNHAVFVDGQRRLLDHTFLKFLEPINESR
Ga0211532_100730863	3300020403	Marine	VEVGKLYRVCHRWLLPHTTADFWGNCGPVLYLGEDVIESDDGARIVNYAVFAKGQRRLLDRSFLKFLEPIDEK
Ga0211532_100738173	3300020403	Marine	MKVGELYEVRHKWMLPHSTREFWSTCGPVLYLGEDVIEREDGLRIVNHAVLVKGERRILDRTFLKFLEPLTNTLQKNA
Ga0211699_100661002	3300020410	Marine	VNVGELYEVRHTWLLPHSTSDFWSSCGPVLYIGEDVIVNQDGKKIVNYVVLAGGERRVLDQSFLKFLEPISCSDRKTGV
Ga0211699_103030691	3300020410	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTKIVNHAVFVKGQRVILDKSFLKFLELADAS
Ga0211587_1000029114	3300020411	Marine	MVKGKLYKVAHNWLLPHSTSEFWSSCGPVLYLGEDVIERDDGVRVVNHAVLVKGERRIVDRSFLKFFEPLTKA
Ga0211587_103878563	3300020411	Marine	VRHKWLLPRSTSDFWSDCGPVLYLGEDVCYTQDGYKVVNHAVFVKGQRRILDQSFLKFLEPADASG
Ga0211587_104037121	3300020411	Marine	MKVGELYEVRHKWLLPKSRANFWEDCGAVLYLGEDVCYTQDGYKVVNHAVFVKGQRRILDQSFLKFLEPADASVS
Ga0211516_102045771	3300020413	Marine	MKVGELYEVRHTWLLPHSTSDFWSSCGPVLYVGEDVFVNQDGKKIVNYVVLAGGERRTLDQSFLKFLEPISCSNRKAGV
Ga0211516_102762633	3300020413	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASV
Ga0211521_1000074240	3300020428	Marine	VQVGELYEIQHKWMLPYSTSKFWSDCGPILYLGEDVIDREDGARIVNHAVLVKGQRRILDGSFLKFLEPLTKT
Ga0211521_100122466	3300020428	Marine	MKPGELYAVKHKWLLPRSLSDFWSPVETVIYIGEDVIEREDGVKITNHVVLAEGQPRILDQTFLKFLEPVHENR
Ga0211622_1000043557	3300020430	Marine	VQVGKLYEVRHKWQLPFSTRKFWSNCGPVLYLGEDVIEREDGVKIVNHAVLANGQKRILDKSFLKFLEPLTSS
Ga0211622_1001815914	3300020430	Marine	VKVGELYEVRHNWLLPHSTRDFWSTCGPVLYLGEDVIEREDGAMIVNHAVLVKGQRRILDKSFLKFLEPLTKT
Ga0211622_100308238	3300020430	Marine	MMKVGSLYEVRHKWLLPRSTSDFWSNCGSVLYLGEDIIRRDDGVTVVNHVVLVDGQRRILDKSFLKFLELINENG
Ga0211622_100595666	3300020430	Marine	MKVGELYQVCHKWLLPHSLSDFWSSCGPVLYLGEDVIEREDGAKIVNHAVFVDGQHRILDHTFLKFLEPINESR
Ga0211546_105872232	3300020462	Marine	VKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASVP
Ga0211543_100752174	3300020470	Marine	VQVGELYEVRHKWMLPYSTSSFWLDCGPILYLGEDVIEREDGVRIVNHAVLVKGERRILDGSFLKFLEPLTKTLQKNA
Ga0211543_101562133	3300020470	Marine	MKVGELYEVKHKWLLPISISDFWSDCGPVLYLGEEGLICEDGTKIVNHVVFVKGQRRILDQSFLKFLEPADASVL
Ga0211614_100052708	3300020471	Marine	MNVGELYQVCHKWLLPHSTSDFWSNCGAVLYVGEDIFHREDGKTIVNHAVLVDGQRRVLDQSFLKFLEPIDESR
Ga0211614_100940742	3300020471	Marine	MKVGELYEVKHKWLLPISISDFWSDCGPVLYLGEDVCYTQDGYKVVNHAVFVKGERRILDQSFLKFLELTDASG
Ga0211625_100366565	3300020473	Marine	MQVGELYEVRHKWLLPRSRANFWEDCGAVLYLGEDVIERDDGTKIVNHVVFVKGQRVIIDQTMLKFLELADASVR
Ga0211625_100415333	3300020473	Marine	MKVGELYEVRHKWLLPRSRANFWDDCGTVLYLGEDVIERDDGTKIVNHVVFVKGQRVILDQSMLKFLELADASG
Ga0211547_102002041	3300020474	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADASVP
Ga0211585_102475314	3300020477	Marine	MKVGELYEVRHKWMLPRSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDQSFLKFLELADAS
Ga0211503_104262831	3300020478	Marine	MKVGELYEVRHKWLLPHSRANFWEDCGPVLYLGEDVIERDDGTRIVNHAVFVKGQRVILDKSMLKFLELADAAVP
Ga0206126_105102822	3300020595	Seawater	MKVGELYEVRHKWLLPISRANFWDDCGAVLYLGEDVIEREDGTKIVNHAVFVKGQRVILDNSFLKFLELADAPVP
Ga0213864_100775592	3300021379	Seawater	MIVGKLYEVRHKWLLPHSTRDFWSDCGPVLYLGEDVIERDDGARIVNHVVLVKGEKRLLDRTFLKFLKPLTTS
Ga0208668_10059048	3300025078	Marine	MKVGELYEVRHRWMLPRSRANFWKDCGLVLYLGEEGLIREDGIKIVNHAVFVKGQRVIIDKTMLKFLELADAS
Ga0208156_10843831	3300025082	Marine	EVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLAHVDGEESPAGPY
Ga0208011_10171396	3300025096	Marine	MKVGELYEVRHKWMLPHSRANFWEDCGAVLYLGEDVIERHDGTKIVNHAVFVKGQRVILDKSMLKFLELADASVL
Ga0208666_10268502	3300025102	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDSSFLKFLELADASVP
Ga0209349_10191229	3300025112	Marine	MKIGELYEVRHKWLLPHDNYEFWSNCGPVLYVGEAIINRDDGKEIVNHVVLVNGKRRLLDSTFLRLLACVDGEESPAGPY
Ga0209434_10465453	3300025122	Marine	MKVGELYEVRHRWMLPRSRANFWEDCGLVLYLGEEGLIREDGIKIVNHAVFVKGQRVIIDKTMLKFLELADAS
Ga0209128_10694484	3300025131	Marine	VKVGDLYEVHHKWLLPHSTSDFWSSCGSVLYLGEDTIHRDDGVTITNHAVLVDGQRRILDKSFLRFLEPIDESR
Ga0209128_10768344	3300025131	Marine	MKPGRLYEIRHKWLLPHSTREFWSSCGPILYLCKDTIRRDDGKIIVNHRVLVKGEYRILDHTFLRLLEPSCESR
Ga0209232_10673243	3300025132	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDKSFLKFLELADAS
Ga0209645_11071002	3300025151	Marine	MKVGELYEVRHTWLLPHSTSDFWSSCGPVLYVGEDVIVNQDGKKIVNYVVLAGGERRVLDQSFLKFLEPISCSNRKAGV
Ga0209645_12096122	3300025151	Marine	MKVGELYEVRHNWLLPHSTRDFWSTCGPVLYLGEDVIEREDGARIVNHAVLVKGERRILDRTFLKFLEPLTKA
Ga0209757_101042953	3300025873	Marine	VKVGKLYEVRHEWLLPHDNCEFLSSCGPILYLGEDVIERSDGKRIINHAVLARGKHHILDTTFLRLLEPINEGDQ
Ga0208815_10269951	3300026134	Marine Oceanic	MKVGELYEVRHKWMLPRSRANFWEDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDSSFLKFLELADAS
Ga0209404_100014072	3300027906	Marine	MKIGELYEIQHKWMLPYSASKFWLDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFLKFLEPLTKT
Ga0209404_105417192	3300027906	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTKIVNHAVFVKGQRVILDNSFLKFLELADASVS
Ga0256381_10574521	3300028018	Seawater	VKVGDLYEVRHKWLLPHDNREFWSSCGPILYLGEDVIDRSDGKSIVNHAVLAGGEHRLLDATFLRLLEPVDEGDP
Ga0256382_10731461	3300028022	Seawater	MKVGELYEVRHKWLLPRSRANFWEDCGAVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDKSMLKFLELADAS
Ga0183748_10222174	3300029319	Marine	MIVGELYEVRPGVLTHHNFWSNCGPVLYLGEDAIDRKDGVRIIRIINHVVLVKGEKRLLDRTFLKFLKPLTSS
Ga0183748_10274853	3300029319	Marine	VNAGELYEVRHKWLLPHSTSDFWSSCGPVLYVGEDVIVNQDGAKVVNHVVLAAGQRRVLDKSFLKFLEPIDGDR
Ga0183748_10441755	3300029319	Marine	VKPGELYKVCHTWLLPHSTYDFWSSCGPVLYIGEEGLLREDGVKIVNHVVLVAGQRRVLDQSFLKFLEPIDESR
Ga0183748_10454483	3300029319	Marine	MKVGELYEVKHKWLLPISISDFWSDCGPVLYLGEEGLIREDGTKIVNHAVFVKGQRRLLDQSFLKFLEPADASVL
Ga0183748_11004712	3300029319	Marine	MKVGELYEVKHKWLLPISISDFWSDCGPVLYLGEEGLIREDGTKIVNHAVFVKGQRRLLDQSFLKFLEPADAS
Ga0183757_100352511	3300029787	Marine	MKVGELYEVRHKWLLPISRANFWDDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVILDNSFLKFLELADAS
Ga0315332_106265171	3300031773	Seawater	MQVGELYEIQHKWMLPYSTSKFWMDCGPILYLGEDVIDREDGVRIVNHAVLVKGQRRILDGSFLKFLEPLTKT
Ga0315316_104374344	3300032011	Seawater	YEVRHKWLLPHSRANFWEDCGTVLYLGEDVIEREDGTRIVNHAVFVKGQRVIIDKSMLKFLELANASVP
Ga0315315_106371241	3300032073	Seawater	CHKWLLPRSTSDFWSSCGSVLYLGEDIIHREDGVTITNHAVLVDGQRRLLDKSFLKFLEPIDESR
Ga0315315_106550814	3300032073	Seawater	MMKVGNLYEVRHKWLLPRSTSDFWSICGSVLYLGKDTIHRDDGVTITNHAVLVDSQRRILDKSFLRFLEPTDESR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090259

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences