NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090255

Metagenome / Metatranscriptome Family F090255

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090255
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 60 residues
Representative Sequence MAEVAIEMADIQAVLNSTPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPE
Number of Associated Samples 76
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.93 %
% of genes near scaffold ends (potentially truncated) 39.81 %
% of genes from short scaffolds (< 2000 bps) 79.63 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(68.519 % of family members)
Environment Ontology (ENVO) Unclassified
(94.444 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(78.704 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.67%    β-sheet: 0.00%    Coil/Unstructured: 52.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00902TatC 15.74
PF05065Phage_capsid 1.85
PF13481AAA_25 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 15.74
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 1.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.67 %
All OrganismsrootAll Organisms33.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002484|JGI25129J35166_1016659Not Available1767Open in IMG/M
3300002514|JGI25133J35611_10015581All Organisms → Viruses → Predicted Viral3149Open in IMG/M
3300003690|PicViral_1005369All Organisms → Viruses → Predicted Viral3641Open in IMG/M
3300005423|Ga0066828_10095247All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300005426|Ga0066847_10176170All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300006736|Ga0098033_1012463All Organisms → Viruses → Predicted Viral2722Open in IMG/M
3300006738|Ga0098035_1018450Not Available2750Open in IMG/M
3300006738|Ga0098035_1062061All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300006750|Ga0098058_1125237Not Available686Open in IMG/M
3300006751|Ga0098040_1053271All Organisms → Viruses → Predicted Viral1255Open in IMG/M
3300006753|Ga0098039_1042766All Organisms → Viruses → Predicted Viral1596Open in IMG/M
3300006753|Ga0098039_1195751Not Available685Open in IMG/M
3300006753|Ga0098039_1197617Not Available681Open in IMG/M
3300006753|Ga0098039_1229451Not Available626Open in IMG/M
3300006754|Ga0098044_1055142All Organisms → Viruses → Predicted Viral1683Open in IMG/M
3300006793|Ga0098055_1332598Not Available566Open in IMG/M
3300006900|Ga0066376_10572485All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006927|Ga0098034_1067414All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300006927|Ga0098034_1191970Not Available571Open in IMG/M
3300006928|Ga0098041_1011396Not Available2960Open in IMG/M
3300006929|Ga0098036_1000135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium36544Open in IMG/M
3300006929|Ga0098036_1082667Not Available989Open in IMG/M
3300007963|Ga0110931_1072904Not Available1037Open in IMG/M
3300008216|Ga0114898_1086848Not Available949Open in IMG/M
3300008217|Ga0114899_1060033Not Available1337Open in IMG/M
3300008217|Ga0114899_1227780Not Available581Open in IMG/M
3300009173|Ga0114996_10001663Not Available29613Open in IMG/M
3300009173|Ga0114996_10118339Not Available2221Open in IMG/M
3300009173|Ga0114996_10842144Not Available661Open in IMG/M
3300009173|Ga0114996_10985639All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338599Open in IMG/M
3300009409|Ga0114993_10401776Not Available1030Open in IMG/M
3300009409|Ga0114993_10490040All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338914Open in IMG/M
3300009414|Ga0114909_1015636All Organisms → Viruses → Predicted Viral2576Open in IMG/M
3300009418|Ga0114908_1090718Not Available1033Open in IMG/M
3300009418|Ga0114908_1204668Not Available612Open in IMG/M
3300009481|Ga0114932_10259708Not Available1046Open in IMG/M
3300009595|Ga0105214_118860Not Available551Open in IMG/M
3300009603|Ga0114911_1003515All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon6714Open in IMG/M
3300009605|Ga0114906_1167174Not Available751Open in IMG/M
3300009605|Ga0114906_1174220Not Available731Open in IMG/M
3300009620|Ga0114912_1046927Not Available1112Open in IMG/M
3300009706|Ga0115002_11059845Not Available553Open in IMG/M
3300009786|Ga0114999_10186654Not Available1729Open in IMG/M
3300010149|Ga0098049_1064330All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1161Open in IMG/M
3300010155|Ga0098047_10036015All Organisms → Viruses → Predicted Viral1970Open in IMG/M
3300010155|Ga0098047_10066301Not Available1417Open in IMG/M
3300010155|Ga0098047_10313981Not Available591Open in IMG/M
3300010883|Ga0133547_10957351Not Available1662Open in IMG/M
3300010883|Ga0133547_10974176Not Available1644Open in IMG/M
3300010883|Ga0133547_11075507All Organisms → Viruses → Predicted Viral1549Open in IMG/M
3300017702|Ga0181374_1021135Not Available1159Open in IMG/M
3300017718|Ga0181375_1006805All Organisms → Viruses → Predicted Viral2046Open in IMG/M
3300017724|Ga0181388_1141698Not Available572Open in IMG/M
3300017731|Ga0181416_1069451Not Available833Open in IMG/M
3300017775|Ga0181432_1274144Not Available534Open in IMG/M
3300022227|Ga0187827_10080430All Organisms → Viruses → Predicted Viral2477Open in IMG/M
3300022227|Ga0187827_10304642Not Available1025Open in IMG/M
3300024344|Ga0209992_10070461Not Available1616Open in IMG/M
(restricted) 3300024517|Ga0255049_10175726Not Available977Open in IMG/M
(restricted) 3300024518|Ga0255048_10071828All Organisms → Viruses → Predicted Viral1721Open in IMG/M
(restricted) 3300024520|Ga0255047_10077180All Organisms → Viruses → Predicted Viral1718Open in IMG/M
3300025045|Ga0207901_1012580Not Available1176Open in IMG/M
3300025082|Ga0208156_1024962All Organisms → Viruses → Predicted Viral1319Open in IMG/M
3300025097|Ga0208010_1060660Not Available824Open in IMG/M
3300025097|Ga0208010_1062397Not Available809Open in IMG/M
3300025098|Ga0208434_1005782All Organisms → Viruses → environmental samples → uncultured Mediterranean phage3863Open in IMG/M
3300025109|Ga0208553_1016714Not Available1975Open in IMG/M
3300025109|Ga0208553_1066645Not Available870Open in IMG/M
3300025110|Ga0208158_1046717Not Available1072Open in IMG/M
3300025112|Ga0209349_1020493All Organisms → Viruses → Predicted Viral2342Open in IMG/M
3300025112|Ga0209349_1027807Not Available1919Open in IMG/M
3300025112|Ga0209349_1029038All Organisms → Viruses → Predicted Viral1866Open in IMG/M
3300025112|Ga0209349_1185606All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.538Open in IMG/M
3300025114|Ga0208433_1119278Not Available642Open in IMG/M
3300025118|Ga0208790_1079845Not Available979Open in IMG/M
3300025128|Ga0208919_1002297All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon10116Open in IMG/M
3300025131|Ga0209128_1039382Not Available1828Open in IMG/M
3300025141|Ga0209756_1054731All Organisms → Viruses → Predicted Viral1924Open in IMG/M
3300025141|Ga0209756_1074054All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300025168|Ga0209337_1225350Not Available739Open in IMG/M
3300025251|Ga0208182_1010193All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Kiritimatiellaceae → unclassified Kiritimatiellaceae → Kiritimatiellaceae bacterium2672Open in IMG/M
3300025264|Ga0208029_1013833Not Available2154Open in IMG/M
3300025277|Ga0208180_1112194Not Available591Open in IMG/M
3300025287|Ga0207903_1066458Not Available625Open in IMG/M
3300025287|Ga0207903_1082173All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.547Open in IMG/M
3300026103|Ga0208451_1030605Not Available634Open in IMG/M
3300026103|Ga0208451_1042730Not Available557Open in IMG/M
3300027838|Ga0209089_10001288Not Available22915Open in IMG/M
3300027839|Ga0209403_10600491Not Available533Open in IMG/M
3300027847|Ga0209402_10677018Not Available570Open in IMG/M
3300027847|Ga0209402_10798438Not Available504Open in IMG/M
3300030722|Ga0308137_1020810All Organisms → Viruses → Predicted Viral1165Open in IMG/M
3300030729|Ga0308131_1029552Not Available1143Open in IMG/M
3300030729|Ga0308131_1121555Not Available536Open in IMG/M
3300031340|Ga0308146_1034607Not Available853Open in IMG/M
3300031605|Ga0302132_10021276Not Available3503Open in IMG/M
3300031605|Ga0302132_10049624Not Available2192Open in IMG/M
3300031605|Ga0302132_10078349Not Available1687Open in IMG/M
3300031605|Ga0302132_10497999Not Available536Open in IMG/M
3300031605|Ga0302132_10500998Not Available534Open in IMG/M
3300031625|Ga0302135_10147009All Organisms → Viruses → Predicted Viral1078Open in IMG/M
3300031627|Ga0302118_10051438Not Available2098Open in IMG/M
3300031646|Ga0302133_10332502Not Available707Open in IMG/M
3300031801|Ga0310121_10089117Not Available1996Open in IMG/M
3300031811|Ga0310125_10076344Not Available1775Open in IMG/M
3300032138|Ga0315338_1022372All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium2926Open in IMG/M
3300033742|Ga0314858_121712Not Available667Open in IMG/M
3300034654|Ga0326741_030071Not Available948Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine68.52%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean13.89%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic2.78%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.78%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.78%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.85%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.85%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.85%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.93%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.93%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.93%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300005423Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47EnvironmentalOpen in IMG/M
3300005426Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025287Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300030722Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_943_SCM (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030729Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1108_32.2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031340Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_322_32.3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031625Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surfaceEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031646Marine microbial communities from Western Arctic Ocean, Canada - CB9_33.1EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300032138Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25129J35166_101665913300002484MarineMADVQIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKD
JGI25133J35611_1001558163300002514MarineMADVQIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
PicViral_100536913300003690Marine, Hydrothermal Vent PlumeMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAATAPACDCEKDASSQDKQGDD*
Ga0066828_1009524743300005423MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0066847_1017617013300005426MarineVLNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098033_101246353300006736MarineMADVQIEMADIQAILNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098035_101845033300006738MarineMADVQIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDASSFVPETADSYTS*
Ga0098035_106206133300006738MarineMAEVAIEMADIQAVLNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098058_112523713300006750MarineMAEVEIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098040_105327143300006751MarineMADVQIEMADIQTVLNASPVFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098039_104276653300006753MarineAEVAIEMADIQAVLNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098039_119575113300006753MarineMADVQIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098039_119761733300006753MarineMAEVAIEMADIQAVLNASPAFAQAVQTVALSRRVDELEAEKAATPVCNCQETDEVLK*
Ga0098039_122945113300006753MarineMADVQIEMVDIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0098044_105514253300006754MarineMAEVAIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS*
Ga0098055_133259823300006793MarineMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDELPQDEQGDD*
Ga0066376_1057248533300006900MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAKAAPACDCQTEDEQGDD*
Ga0098034_106741433300006927MarineMAEVAIEMADIQAVLNSTPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPE
Ga0098034_119197033300006927MarineMADVQIEMADIQAVLNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPE
Ga0098041_101139653300006928MarineMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKAAITVCDCKKDDLSEE*
Ga0098036_1000135433300006929MarineHMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKAAITVCDCKKDDLSEE*
Ga0098036_108266713300006929MarineHMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDELPQDEQGDD*
Ga0110931_107290453300007963MarineEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDELPQDEQGDD*
Ga0114898_108684823300008216Deep OceanMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD*
Ga0114899_106003313300008217Deep OceanPIGKGEHMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKCDCQKDELPQDEQGDD*
Ga0114899_122778023300008217Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQD
Ga0114996_1000166353300009173MarineMADVAIELEDIQTVLNVSPAFSQAVQAAALSRRVDELEAAAAAAPGCDCQVDSSTKKKKGA*
Ga0114996_1011833943300009173MarineMAEVAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQGKKKT*
Ga0114996_1084214413300009173MarineMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQGKKKT*
Ga0114996_1098563933300009173MarineMAEVAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPGCSCG
Ga0114993_1040177633300009409MarineLRKVKKEIHMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQGKKKT*
Ga0114993_1049004033300009409MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAAAVPVCDCQQDDVKGEWDDTSEDE*
Ga0114909_101563633300009414Deep OceanMAEVQVEMADINAVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDK
Ga0114908_109071823300009418Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGSSQDKQGDD*
Ga0114908_120466813300009418Deep OceanMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDESKKKVK*
Ga0114932_1025970823300009481Deep SubsurfaceLIGGYMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDESKKKVK*
Ga0105214_11886023300009595Marine OceanicMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCEKDASSQDKQGDD*
Ga0114911_100351553300009603Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD*
Ga0114906_116717423300009605Deep OceanMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQG
Ga0114906_117422023300009605Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKD
Ga0114912_104692713300009620Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASFQDKQGDD*
Ga0115002_1105984513300009706MarineMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGFEAEKKVT*
Ga0114999_1018665453300009786MarineIHMAEVAIEMADIQTILNASPAFAQAVQGAALSRRVDELEAEKAEAPGCSCGQDDVKGEWDDTSEDE*
Ga0098049_106433033300010149MarineMAEVQVEMADINAVLNSNPTFAQAVQVEEMTRRIDELEAEKAAITVCDCKKDDLSEE*
Ga0098047_1003601513300010155MarineMADVQIEMADIQAILNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCQEDSSF
Ga0098047_1006630143300010155MarineMAEVAIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKD
Ga0098047_1031398123300010155MarineMAEVTIEMADIQTVLNSTPAFAQAVQTVALSRRVDELEAEKAATPVCNCQETDEVLK*
Ga0133547_1095735123300010883MarineMAEVVIEMADVQAVLNASPEFSQAVSAAALNRRVDELEAEKAVTPVCNCQEVA*
Ga0133547_1097417623300010883MarineMAEVAIEMADIQTVLNSTPAFAQAVQGAALSRRVDELEAEKAEAPGCSCGQNDLSEEEVT
Ga0133547_1107550733300010883MarineADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGFEAEKKVT*
Ga0181374_102113523300017702MarineMADVQIEMADIQAILNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0181375_100680513300017718MarineMADVQIEMADIQAVLNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0181388_114169823300017724SeawaterMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDELPQDEQGDD
Ga0181416_106945133300017731SeawaterKGEHMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDELPQDEQGDD
Ga0181432_127414413300017775SeawaterIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD
Ga0187827_1008043053300022227SeawaterMAEVAIEMADIQTVLNASPVFAQAVQSAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0187827_1030464213300022227SeawaterADIQTVLNSTPAFAQAVQTVALSRRVDELEAEKAATPVCNCQETDEVLK
Ga0209992_1007046133300024344Deep SubsurfaceMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDESKKKVK
(restricted) Ga0255049_1017572633300024517SeawaterMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD
(restricted) Ga0255048_1007182833300024518SeawaterMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDGFEAEKKV
(restricted) Ga0255047_1007718013300024520SeawaterMADIQTVLNASPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGFEAEKKVT
Ga0207901_101258053300025045MarineHMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASPQDKQGDD
Ga0208156_102496213300025082MarineMAEVAIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0208010_106066043300025097MarineMADVQIEMADIQAVLNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDS
Ga0208010_106239713300025097MarineMADVQIEMADIQAILNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDS
Ga0208434_100578233300025098MarineMAEVQVEMADINAVLNSNPTFAQAVQVAAMNRRIDELEAEKAAVPVCDCQQNDSSEDEQE
Ga0208553_101671433300025109MarineMAEVAIEMADIQAVLNASPAFAQAVQGAALARRVDELEAEKAAAPACDCE
Ga0208553_106664513300025109MarineMAEVAIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADS
Ga0208158_104671733300025110MarineMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKAAITVCDCKKDDLSEE
Ga0209349_102049313300025112MarineMADVQIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYT
Ga0209349_102780743300025112MarineMAEVTIEMADIQTVLNSTPAFAQAVQTVALSRRVDELEAEKAATPVCNCQETDEVLK
Ga0209349_102903813300025112MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0209349_118560613300025112MarineMAEVAIEMADIQTVLNSTPAFAQAVQGAALARRVDELEAEKVAAPACDCQKDNTDD
Ga0208433_111927813300025114MarineIHMADVQIEMADIQAVLNTSPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0208790_107984523300025118MarineMAEVAIEMADIQAVLNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0208919_100229753300025128MarineMAEVQVEMADINAVLNSNPTFAQAVQVAAMTRRIDELEAEKCDCQKDELPQDEQGDD
Ga0209128_103938253300025131MarineMADVQIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSYTS
Ga0209756_105473113300025141MarineMAEVAIEMADIQAILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFVPETADSY
Ga0209756_107405433300025141MarineMADVQIEMADIQTILNASPAFAQAVQGAALARRVDELEAEKAAAPACDCEKDSSFV
Ga0209337_122535033300025168MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAATAPACDCQKDGFEAEKKV
Ga0208182_101019333300025251Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGSSQDKQGDD
Ga0208029_101383333300025264Deep OceanMAEVQVEMADINAVLNSNPTFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD
Ga0208180_111219433300025277Deep OceanMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQDKQGDD
Ga0207903_106645833300025287Deep OceanMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCEKTEGTTE
Ga0207903_108217323300025287Deep OceanAFAQAVQGAALARRVDELEAEKAAAPACDCQKDSSDFEPETSASFTTS
Ga0208451_103060533300026103Marine OceanicAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAKAAPACDCQTEDEQGDD
Ga0208451_104273023300026103Marine OceanicMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAKAAPACDC
Ga0209089_1000128873300027838MarineMADVAIELEDIQTVLNVSPAFSQAVQAAALSRRVDELEAAAAAAPGCDCQVDSSTKKKKG
Ga0209403_1060049133300027839MarineVAIELEDIQTVLNVSPAFSQAVQAAALSRRVDELEAAAAAAPGCDCQVDSSTKKKKGA
Ga0209402_1067701813300027847MarineDIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQGKKKT
Ga0209402_1079843813300027847MarineMAEVAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQ
Ga0308137_102081023300030722MarineMAEVQIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPGCSCGQDDVKGEWDDTSEDE
Ga0308131_102955223300030729MarineMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQGKKK
Ga0308131_112155513300030729MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCEKDGSSQDKQGDD
Ga0308146_103460723300031340MarineMAEVAIEMADIQTVLNASPAFAQAVTAQAMSRRIDELEAEKAEAPGCSCGQDDVKGEWDDTSEDE
Ga0302132_1002127653300031605MarineMAEVAIEMADIQTILNASPAFAQAVQGAALSRRVDELEAEKAEAPGCSCGQDDSYEEEVT
Ga0302132_1004962423300031605MarineMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKVEAPACDCQKDASSQGKKK
Ga0302132_1007834953300031605MarineAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPGCSCGQDDVKGEWDDTSED
Ga0302132_1049799933300031605MarineDVAIELEDIQTVLNVSPAFSQAVQAAALSRRVDELEAAAAAAPGCDCQVDSSTKKKKGA
Ga0302132_1050099823300031605MarineMAEVAIEMADIQTVLNSNPAFAQAVQSAALARRVDELEAEKAAAPPACDCQKDTPSEQDL
Ga0302135_1014700923300031625MarineMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPGCSCGQDDVKGEWDDTSEDE
Ga0302118_1005143843300031627MarineMAEVAIEMADIQTILNASPAFAQAVQGAALSRRVDELEAEKAEAPGCSCGQNDSYEEEVT
Ga0302133_1033250223300031646MarineMAEVAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPACDCQKDASSQGKKK
Ga0310121_1008911753300031801MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCEKDASSQDKQGDD
Ga0310125_1007634453300031811MarineMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCQKDASSQDKQGDD
Ga0315338_102237233300032138SeawaterMAEVAIEMADIQTVLNSTPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDGSSQDEQGDD
Ga0314858_121712_131_3163300033742Sea-Ice BrineMAEVAIEMADIQTVLNSSPAFAQAVTAQAMSRRIDELEAEKAEAPACDCEKDASSQGKKK
Ga0326741_030071_27_2033300034654Filtered SeawaterMAEVAIEMADIQTILNASPAFAQAVQGAALARRVDELEAAAEAAPACDCQKDGSSKDE


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