Metagenome / Metatranscriptome Family F090241

Overview

Basic Information

• Family ID: F090241
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 108
• Average Sequence Length: 66 residues
• Representative Sequence: MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
• Number of Associated Samples: 74
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 72.22 %
• % of genes near scaffold ends (potentially truncated): 44.44 %
• % of genes from short scaffolds (< 2000 bps): 83.33 %
• Associated GOLD sequencing projects: 64
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (57.407 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.667 % of family members)
• Environment Ontology (ENVO): Unclassified (80.556 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (95.370 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 21.54%
  β-sheet: 21.54%
  Coil/Unstructured: 56.92%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF06067	DUF932	4.63
PF12236	Head-tail_con	1.85
PF11753	DUF3310	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.41 %
All Organisms	root	All Organisms	42.59 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.41 %
Viruses	superkingdom	All Organisms → Viruses	42.59 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.74 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.85 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.74 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.85 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000101|DelMOSum2010_c10033090	All Organisms → Viruses → Predicted Viral	2810
3300000101|DelMOSum2010_c10242514	Not Available	573
3300000115|DelMOSum2011_c10097941	Not Available	969
3300000115|DelMOSum2011_c10099854	Not Available	954
3300000117|DelMOWin2010_c10042356	All Organisms → Viruses → Predicted Viral	2087
3300000117|DelMOWin2010_c10050692	All Organisms → Viruses → Predicted Viral	1834
3300000928|OpTDRAFT_10170365	All Organisms → Viruses → Predicted Viral	1371
3300002242|KVWGV2_10720271	All Organisms → Viruses → Predicted Viral	3768
3300005427|Ga0066851_10149525	Not Available	745
3300005837|Ga0078893_10695317	All Organisms → Viruses → environmental samples → uncultured marine virus	11504
3300006752|Ga0098048_1026747	All Organisms → Viruses → Predicted Viral	1898
3300006754|Ga0098044_1223921	Not Available	734
3300006754|Ga0098044_1304614	Not Available	609
3300006789|Ga0098054_1028328	All Organisms → Viruses → Predicted Viral	2198
3300006789|Ga0098054_1029091	All Organisms → Viruses → Predicted Viral	2167
3300006793|Ga0098055_1115350	All Organisms → Viruses → Predicted Viral	1044
3300006793|Ga0098055_1153864	Not Available	884
3300006793|Ga0098055_1204370	Not Available	750
3300006919|Ga0070746_10300052	Not Available	738
3300006920|Ga0070748_1074104	All Organisms → Viruses → Predicted Viral	1321
3300006921|Ga0098060_1201632	Not Available	543
3300006924|Ga0098051_1066849	Not Available	981
3300006924|Ga0098051_1093727	Not Available	808
3300006925|Ga0098050_1027194	All Organisms → Viruses → Predicted Viral	1566
3300006925|Ga0098050_1046486	All Organisms → Viruses → Predicted Viral	1150
3300006925|Ga0098050_1048429	All Organisms → Viruses → Predicted Viral	1123
3300006925|Ga0098050_1073358	Not Available	885
3300006929|Ga0098036_1078319	All Organisms → Viruses → Predicted Viral	1019
3300007229|Ga0075468_10037052	All Organisms → Viruses → Predicted Viral	1713
3300007229|Ga0075468_10172964	Not Available	643
3300007276|Ga0070747_1115223	Not Available	984
3300007276|Ga0070747_1307608	Not Available	544
3300007345|Ga0070752_1319151	Not Available	588
3300007540|Ga0099847_1094885	Not Available	911
3300007540|Ga0099847_1217462	Not Available	554
3300007963|Ga0110931_1171441	Not Available	650
3300007963|Ga0110931_1210853	Not Available	579
3300007992|Ga0105748_10554416	Not Available	505
3300008050|Ga0098052_1042822	Not Available	1989
3300008050|Ga0098052_1198526	Not Available	780
3300009003|Ga0102813_1144836	Not Available	743
3300009086|Ga0102812_10257847	Not Available	949
3300009593|Ga0115011_10478176	Not Available	985
3300010149|Ga0098049_1162757	Not Available	688
3300010150|Ga0098056_1271297	Not Available	561
3300010151|Ga0098061_1019903	All Organisms → Viruses → environmental samples → uncultured marine virus	2770
3300010151|Ga0098061_1029850	All Organisms → Viruses → Predicted Viral	2196
3300010153|Ga0098059_1046303	All Organisms → Viruses → Predicted Viral	1753
3300010153|Ga0098059_1140049	Not Available	955
3300010153|Ga0098059_1277285	Not Available	643
3300010153|Ga0098059_1284575	Not Available	633
3300013010|Ga0129327_10408382	Not Available	722
3300017697|Ga0180120_10153829	Not Available	973
3300017728|Ga0181419_1038536	All Organisms → Viruses → Predicted Viral	1279
3300017729|Ga0181396_1014746	All Organisms → Viruses → Predicted Viral	1558
3300017729|Ga0181396_1036136	Not Available	982
3300017732|Ga0181415_1073999	Not Available	769
3300017733|Ga0181426_1020087	All Organisms → Viruses → Predicted Viral	1312
3300017735|Ga0181431_1005501	All Organisms → Viruses → Predicted Viral	3151
3300017740|Ga0181418_1014191	All Organisms → Viruses → Predicted Viral	2132
3300017744|Ga0181397_1014173	All Organisms → Viruses → Predicted Viral	2410
3300017744|Ga0181397_1043281	All Organisms → Viruses → Predicted Viral	1261
3300017751|Ga0187219_1156809	Not Available	653
3300017753|Ga0181407_1048155	All Organisms → Viruses → Predicted Viral	1118
3300017772|Ga0181430_1080467	Not Available	984
3300017779|Ga0181395_1056688	All Organisms → Viruses → Predicted Viral	1285
3300017781|Ga0181423_1034463	All Organisms → Viruses → Predicted Viral	2050
3300017781|Ga0181423_1042311	All Organisms → Viruses → Predicted Viral	1831
3300020438|Ga0211576_10002446	Not Available	13462
3300021371|Ga0213863_10420095	Not Available	537
3300021378|Ga0213861_10459122	Not Available	613
3300021378|Ga0213861_10497546	Not Available	579
3300021957|Ga0222717_10128863	Not Available	1559
3300021959|Ga0222716_10134964	All Organisms → Viruses → Predicted Viral	1627
3300021959|Ga0222716_10453868	Not Available	731
3300021960|Ga0222715_10092857	All Organisms → Viruses → Predicted Viral	1965
3300022178|Ga0196887_1113479	Not Available	591
3300024291|Ga0228660_1124856	Not Available	511
3300025070|Ga0208667_1017260	All Organisms → Viruses → Predicted Viral	1468
3300025084|Ga0208298_1092369	Not Available	554
3300025085|Ga0208792_1028917	Not Available	1109
3300025085|Ga0208792_1038473	Not Available	927
3300025085|Ga0208792_1073085	Not Available	618
3300025103|Ga0208013_1023106	All Organisms → Viruses → Predicted Viral	1830
3300025103|Ga0208013_1057106	All Organisms → Viruses → Predicted Viral	1046
3300025103|Ga0208013_1129706	Not Available	616
3300025108|Ga0208793_1020049	All Organisms → Viruses → Predicted Viral	2375
3300025108|Ga0208793_1031452	All Organisms → Viruses → Predicted Viral	1764
3300025108|Ga0208793_1146644	Not Available	627
3300025110|Ga0208158_1023372	All Organisms → Viruses → Predicted Viral	1608
3300025133|Ga0208299_1018331	All Organisms → Viruses → Predicted Viral	3173
3300025652|Ga0208134_1017814	All Organisms → Viruses → Predicted Viral	2731
3300025652|Ga0208134_1109298	Not Available	751
3300025806|Ga0208545_1009697	All Organisms → Viruses → Predicted Viral	3536
3300025806|Ga0208545_1120019	Not Available	662
3300026470|Ga0247599_1134532	Not Available	514
3300026500|Ga0247592_1054443	Not Available	976
3300026503|Ga0247605_1054702	Not Available	993
3300027753|Ga0208305_10055864	All Organisms → Viruses → Predicted Viral	1523
(restricted) 3300027861|Ga0233415_10104439	All Organisms → Viruses → Predicted Viral	1250
3300027906|Ga0209404_10152940	All Organisms → Viruses → Predicted Viral	1405
3300027906|Ga0209404_10563598	Not Available	759
3300028198|Ga0257121_1277647	Not Available	503
3300028706|Ga0257115_1003142	Not Available	9193
3300029448|Ga0183755_1031358	All Organisms → Viruses → Predicted Viral	1559
3300031757|Ga0315328_10675281	Not Available	585
3300031774|Ga0315331_10163333	All Organisms → Viruses → Predicted Viral	1660
3300032255|Ga0316209_1121884	Not Available	671

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	41.67%
Coastal	Environmental → Aquatic → Marine → Coastal	24.07%
Strait	Environmental → Aquatic → Marine → Strait	13.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.63%
Inlet	Environmental → Aquatic → Marine → Inlet	2.78%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	41.67%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.15%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	13.89%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.85%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.93%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.67%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	13.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.96%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	6.48%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	5.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.70%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.78%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.85%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.85%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.93%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.93%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.93%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.93%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental
3300026470	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 73R (Metagenome Metatranscriptome)	Environmental
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental
3300026503	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome)	Environmental
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental
3300028198	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100	Environmental
3300028706	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100m	Environmental
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental
3300032255	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month chalcopyrite	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100330906	3300000101	Marine	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
DelMOSum2010_102425142	3300000101	Marine	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
DelMOSum2011_100979411	3300000115	Marine	EIIMSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
DelMOSum2011_100998542	3300000115	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVDWEKQQDNDFKELRL*
DelMOWin2010_100423566	3300000117	Marine	MSVLTIPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL*
DelMOWin2010_100506924	3300000117	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWEKQLADDVKELRL*
OpTDRAFT_101703655	3300000928	Freshwater And Marine	YFDEEVNKRVRFVWDFIKEIIMSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQIDNDLKELKL*
KVWGV2_107202713	3300002242	Marine Sediment	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIIPVNWDKQQDNDFKELRL*
Ga0066851_101495253	3300005427	Marine	MAVLSVPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0078893_1069531714	3300005837	Marine Surface Water	MSVLSVPPNEVHRNEWGELVCNVYDEDNIFLYTEQIDEDLYKLHGAIVPANWQQQQGDDSYRELSL*
Ga0098048_10267472	3300006752	Marine	MSVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRL*
Ga0098044_12239211	3300006754	Marine	MAVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0098044_13046142	3300006754	Marine	LLHYNAFATCGGRRFVWVFIKEISMAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRL*
Ga0098054_10283282	3300006789	Marine	MAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRL*
Ga0098054_10290911	3300006789	Marine	MSVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKEL
Ga0098055_11153503	3300006793	Marine	MGVLTVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQQDNDFKEIRL*
Ga0098055_11538642	3300006793	Marine	MAVLTVPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDIYKCNGAIVPVNWEKQQDNDFKELRL*
Ga0098055_12043701	3300006793	Marine	KEIIMAVLSVPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0070746_103000522	3300006919	Aqueous	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL*
Ga0070748_10741045	3300006920	Aqueous	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0098060_12016321	3300006921	Marine	MSVLTIPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQ
Ga0098051_10668492	3300006924	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRI*
Ga0098051_10937274	3300006924	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKCNGAIVPVDWEKQQDNDFKELRL*
Ga0098050_10271942	3300006925	Marine	MSVLTIPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0098050_10464864	3300006925	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRI*
Ga0098050_10484292	3300006925	Marine	MAVLSVPPNEVHRNEWGELRCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDF
Ga0098050_10733582	3300006925	Marine	MAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQ
Ga0098036_10783194	3300006929	Marine	MAVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL*
Ga0075468_100370525	3300007229	Aqueous	LEEISMSVLTIPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL*
Ga0075468_101729642	3300007229	Aqueous	EVNRRVRFVWVFIKEIIMSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0070747_11152231	3300007276	Aqueous	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDIYKLNGAIVPVDWAKQQNNDFKELSL*
Ga0070747_13076081	3300007276	Aqueous	YTLNKSCVLLKLLTYLEEIIMSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWEKQLADDVKELRL*
Ga0070752_13191512	3300007345	Aqueous	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0099847_10948851	3300007540	Aqueous	IMSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWAKQQNNDFKELSL*
Ga0099847_12174622	3300007540	Aqueous	IMSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0110931_11714413	3300007963	Marine	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL*
Ga0110931_12108532	3300007963	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0105748_105544161	3300007992	Estuary Water	FYFDEEVNRRVRFVWDFIKEIIMSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0098052_10428223	3300008050	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDF
Ga0098052_11985262	3300008050	Marine	MSVLSVPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKEL
Ga0102813_11448361	3300009003	Estuarine	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0102812_102578471	3300009086	Estuarine	IMSVLTIPPNEVHRNEWGELVCNVYDEDNVILYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0115011_104781761	3300009593	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRL*
Ga0098049_11627572	3300010149	Marine	SSGFFIKEIIMAVLSVPPNEVHRNEWGELRCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKGLRI*
Ga0098056_12712971	3300010150	Marine	VLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWEKQLADDVKELRL*
Ga0098061_10199033	3300010151	Marine	MGVLTVPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRI*
Ga0098061_10298505	3300010151	Marine	MAVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKEL
Ga0098059_10463032	3300010153	Marine	MAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKEL
Ga0098059_11400492	3300010153	Marine	MGVLTVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRI*
Ga0098059_12772851	3300010153	Marine	NEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL*
Ga0098059_12845751	3300010153	Marine	NEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPINWEQQQDNEFKELRL*
Ga0129327_104083821	3300013010	Freshwater To Marine Saline Gradient	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL*
Ga0180120_101538293	3300017697	Freshwater To Marine Saline Gradient	RNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVHVDWEKQLADDVKELRL
Ga0181419_10385362	3300017728	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEKQLADD
Ga0181396_10147462	3300017729	Seawater	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0181396_10361362	3300017729	Seawater	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKCNGAIVPVDWAKQQDNDFKELSLXNIT
Ga0181415_10739991	3300017732	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEKQLADDVKELRL
Ga0181426_10200872	3300017733	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDIYKCNGAIVPVDWAKQQDNDFKELSL
Ga0181431_10055012	3300017735	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0181418_10141913	3300017740	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRLXLCLQ
Ga0181397_10141733	3300017744	Seawater	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKCNGAIVPVDWAKQQDNDFKELSL
Ga0181397_10432812	3300017744	Seawater	MSVLTIPPNEVHRNEWGELVCRVYDEDKVFLYTEQIDEDIYKCNGAIVPVDWAKQQDNDF
Ga0187219_11568092	3300017751	Seawater	FIQEIIMSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0181407_10481552	3300017753	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL
Ga0181430_10804672	3300017772	Seawater	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELR
Ga0181395_10566882	3300017779	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQIDNDLKELKL
Ga0181423_10344635	3300017781	Seawater	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVSWKKQLSDDIKELRL
Ga0181423_10423112	3300017781	Seawater	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRLXLCLQ
Ga0211576_1000244622	3300020438	Marine	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQIDNDLKELKL
Ga0213863_104200951	3300021371	Seawater	MSVLTIPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0213861_104591222	3300021378	Seawater	EVHRNEWGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0213861_104975461	3300021378	Seawater	MSVLTIPPNEVHRNESGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLS
Ga0222717_101288631	3300021957	Estuarine Water	MSVLTIPPNEVHRNEWGELVCRVYDEDKVFLYTEQIDEDIYKCNGAIVPVDWAKQQDNDFKELSL
Ga0222716_101349642	3300021959	Estuarine Water	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQ
Ga0222716_104538681	3300021959	Estuarine Water	WDFIQEIIMSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0222715_100928572	3300021960	Estuarine Water	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL
Ga0196887_11134791	3300022178	Aqueous	RNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0228660_11248561	3300024291	Seawater	VSYDYHTLSFISYVGINRKVRFVWDFIDEISMSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVDWEKQLADDVKELRL
Ga0208667_10172602	3300025070	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWEKQLADDVKELRL
Ga0208298_10923692	3300025084	Marine	MAVLSVPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL
Ga0208792_10289173	3300025085	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRL
Ga0208792_10384731	3300025085	Marine	IIMAVLSVPPNEVHRTQWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL
Ga0208792_10730851	3300025085	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRI
Ga0208013_10231063	3300025103	Marine	MSVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRLXILCLL
Ga0208013_10571063	3300025103	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKCNGAIVPVDWEKQQDNDFKELRL
Ga0208013_11297062	3300025103	Marine	MAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQ
Ga0208793_10200492	3300025108	Marine	MAVLSVPPNEVHRNEWGELRCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRI
Ga0208793_10314524	3300025108	Marine	MGVLTVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKE
Ga0208793_11466441	3300025108	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRL
Ga0208158_10233723	3300025110	Marine	MAVLSVPPNEVHRNEWGELTCNVYDEDNVFLYTEQIDEDIYKLNGAIVPVNWEKQQDNDFKELRL
Ga0208299_10183315	3300025133	Marine	MSVLSVPPNEVHRTQWGELVCRVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNEFKELRL
Ga0208134_10178142	3300025652	Aqueous	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0208134_11092982	3300025652	Aqueous	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0208545_100969712	3300025806	Aqueous	DYAYTLNKSCVLLKLLTYLEEIIMSVLTIPPNEVHRNEWGELICNVYDEDNVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0208545_11200191	3300025806	Aqueous	VFIKEIIMSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0247599_11345321	3300026470	Seawater	TLSFISDVGINRRVRFVWDFIEEISMSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL
Ga0247592_10544432	3300026500	Seawater	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTELIDEDLYKLHGAIVPVNWEQQQDNDFKELRL
Ga0247605_10547022	3300026503	Seawater	MSVLTIPPNEVRRTEWGELVCNVYDEDNVFLYTELIDEDLYKSHGAIVPVNWEQQQDNDFKELRL
Ga0208305_100558641	3300027753	Estuarine	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVNWEQQQDNDFKELRL
(restricted) Ga0233415_101044393	3300027861	Seawater	MSVLSIPPNEVHRTEWGELVCNVYDEDNVFLYTELIDEDMYKLNGAIVPVDWAKQQDNDFKELSL
Ga0209404_101529404	3300027906	Marine	HRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELRL
Ga0209404_105635981	3300027906	Marine	MAVLSVPPNEVHRNEWGELICNVYDEDNVFLYTEKIDEDIYKLNGAIVPVNWEKQQDNDFKELR
Ga0257121_12776471	3300028198	Marine	MSVLTIPPNEVHRNEWGELVCNVYDEDNVFLYTEQIDEGMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0257115_100314213	3300028706	Marine	MSVLTIPPNEVHRNEWGELVCRVYDEDNVFLYTEQIDEDMYKLNGAIVPVDWAKQQDNDFKELSL
Ga0183755_10313582	3300029448	Marine	MSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIIPVNWDKQQDNDFKELRL
Ga0315328_106752811	3300031757	Seawater	LSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEGMYKLHGAIVPVNWEQQQDNDFKELRL
Ga0315331_101633331	3300031774	Seawater	VRFVWDFIEEISMSVLTIPPNEVHRNEWGELVCNVYDEDKVFLYTEQIDEDMYKLNGAIVPVNWEQQLSDDIKELRL
Ga0316209_11218842	3300032255	Microbial Mat	MSVLSIPPNEVRRTEWGELVCNVYDEDNVFLYTEQIDEDMYKLHGAIVPVDWEKQQDNDFKELRL