Metagenome / Metatranscriptome Family F090231

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090231
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	87 residues
Representative Sequence	LSTNDPINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHL
Number of Associated Samples	90
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	24.07 %
% of genes near scaffold ends (potentially truncated)	21.30 %
% of genes from short scaffolds (< 2000 bps)	79.63 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (71.296 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (26.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.37% β-sheet: 0.00% Coil/Unstructured: 11.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03167	UDG	5.56
PF00561	Abhydrolase_1	4.63
PF00072	Response_reg	3.70
PF00491	Arginase	1.85
PF01638	HxlR	1.85
PF00543	P-II	0.93
PF10604	Polyketide_cyc2	0.93
PF01728	FtsJ	0.93
PF01903	CbiX	0.93
PF02933	CDC48_2	0.93
PF00082	Peptidase_S8	0.93
PF00037	Fer4	0.93
PF07998	Peptidase_M54	0.93
PF07995	GSDH	0.93
PF01926	MMR_HSR1	0.93
PF01361	Tautomerase	0.93
PF00011	HSP20	0.93
PF00535	Glycos_transf_2	0.93
PF03364	Polyketide_cyc	0.93
PF01555	N6_N4_Mtase	0.93
PF00106	adh_short	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	5.56
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	5.56
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	5.56
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.85
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.93
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.93
COG1913	Predicted Zn-dependent protease	General function prediction only [R]	0.93
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.22 %
Unclassified	root	N/A	27.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.22 %
Unclassified	root	N/A	27.78 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	71.30 %
Unclassified	root	N/A	27.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	53.70 %
Unclassified	root	N/A	27.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	52.78 %
Unclassified	root	N/A	27.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	50.00 %
Unclassified	root	N/A	27.78 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.78 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	50.00 %
Unclassified	root	N/A	27.78 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	2.78 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	50.00 %
Unclassified	root	N/A	27.78 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.78 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	34.26 %
Unclassified	root	N/A	27.78 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	8.33 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.78 %
Aeromonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas taiwanensis	0.93 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	0.93 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	34.26 %
Unclassified	root	N/A	27.78 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4.63 %
Candidatus Nitrososphaera gargensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis	2.78 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.78 %
Candidatus Nitrosocosmicus franklandus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus franklandus	0.93 %
Aeromonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas taiwanensis	0.93 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	34.26 %
Unclassified	root	N/A	27.78 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4.63 %
Candidatus Nitrososphaera gargensis Ga9.2	isolate	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	2.78 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.78 %
Candidatus Nitrosocosmicus franklandus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus franklandus	0.93 %
Aeromonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas taiwanensis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0733100	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1529	Open in IMG/M
2228664021\|ICCgaii200_c0735727	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	847	Open in IMG/M
3300000156\|NODE_c0669645	Not Available	2704	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10673794	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	585	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11298428	Not Available	847	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101702088	All Organisms → cellular organisms → Archaea → TACK group	3166	Open in IMG/M
3300000787\|JGI11643J11755_11696605	All Organisms → cellular organisms → Archaea	1878	Open in IMG/M
3300000787\|JGI11643J11755_11713931	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1101	Open in IMG/M
3300000890\|JGI11643J12802_12048504	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	791	Open in IMG/M
3300000956\|JGI10216J12902_106506997	Not Available	771	Open in IMG/M
3300002568\|C688J35102_119166896	Not Available	648	Open in IMG/M
3300004114\|Ga0062593_100018932	Not Available	3568	Open in IMG/M
3300004157\|Ga0062590_100208571	All Organisms → cellular organisms → Archaea	1422	Open in IMG/M
3300004479\|Ga0062595_100080087	Not Available	1648	Open in IMG/M
3300004479\|Ga0062595_100083761	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1625	Open in IMG/M
3300004479\|Ga0062595_100204289	Not Available	1227	Open in IMG/M
3300005179\|Ga0066684_10161261	Not Available	1429	Open in IMG/M
3300005184\|Ga0066671_10341662	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus franklandus	948	Open in IMG/M
3300005186\|Ga0066676_10163796	All Organisms → cellular organisms → Archaea	1407	Open in IMG/M
3300005187\|Ga0066675_11161210	Not Available	574	Open in IMG/M
3300005289\|Ga0065704_10112397	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1935	Open in IMG/M
3300005560\|Ga0066670_10109043	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1564	Open in IMG/M
3300005981\|Ga0081538_10223089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas taiwanensis	745	Open in IMG/M
3300006755\|Ga0079222_10013782	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3039	Open in IMG/M
3300006755\|Ga0079222_10273511	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1081	Open in IMG/M
3300006755\|Ga0079222_10302684	All Organisms → cellular organisms → Archaea	1046	Open in IMG/M
3300006797\|Ga0066659_10579630	All Organisms → cellular organisms → Archaea	909	Open in IMG/M
3300006804\|Ga0079221_10926275	Not Available	643	Open in IMG/M
3300006806\|Ga0079220_11166041	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	632	Open in IMG/M
3300006845\|Ga0075421_100523403	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1405	Open in IMG/M
3300006852\|Ga0075433_10297225	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1430	Open in IMG/M
3300006954\|Ga0079219_10135316	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	1286	Open in IMG/M
3300009147\|Ga0114129_10658347	Not Available	1351	Open in IMG/M
3300009789\|Ga0126307_10034198	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3924	Open in IMG/M
3300010038\|Ga0126315_10750915	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	640	Open in IMG/M
3300010040\|Ga0126308_10021457	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3488	Open in IMG/M
3300010040\|Ga0126308_10041617	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2626	Open in IMG/M
3300010042\|Ga0126314_10008708	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	5665	Open in IMG/M
3300010373\|Ga0134128_10474954	Not Available	1394	Open in IMG/M
3300010373\|Ga0134128_10482518	Not Available	1382	Open in IMG/M
3300010396\|Ga0134126_10335326	Not Available	1767	Open in IMG/M
3300010396\|Ga0134126_11217974	Not Available	836	Open in IMG/M
3300011003\|Ga0138514_100004432	All Organisms → cellular organisms → Archaea	2016	Open in IMG/M
3300012200\|Ga0137382_11041623	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	586	Open in IMG/M
3300012201\|Ga0137365_10302629	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1185	Open in IMG/M
3300012285\|Ga0137370_10370394	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	864	Open in IMG/M
3300012353\|Ga0137367_10590451	All Organisms → cellular organisms → Archaea	778	Open in IMG/M
3300012354\|Ga0137366_10343875	All Organisms → cellular organisms → Archaea	1092	Open in IMG/M
3300012354\|Ga0137366_10485879	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	893	Open in IMG/M
3300012356\|Ga0137371_11120488	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	591	Open in IMG/M
3300012882\|Ga0157304_1008645	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1097	Open in IMG/M
3300012897\|Ga0157285_10006253	Not Available	2203	Open in IMG/M
3300012898\|Ga0157293_10334416	Not Available	513	Open in IMG/M
3300012905\|Ga0157296_10161907	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	680	Open in IMG/M
3300012908\|Ga0157286_10001187	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3859	Open in IMG/M
3300012985\|Ga0164308_11780395	Not Available	573	Open in IMG/M
3300012989\|Ga0164305_11563609	Not Available	587	Open in IMG/M
3300013096\|Ga0157307_1007288	Not Available	1653	Open in IMG/M
3300014488\|Ga0182001_10321773	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	636	Open in IMG/M
3300014497\|Ga0182008_10015634	All Organisms → cellular organisms → Archaea	3956	Open in IMG/M
3300014497\|Ga0182008_10032969	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	2600	Open in IMG/M
3300014497\|Ga0182008_10095463	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	1467	Open in IMG/M
3300015077\|Ga0173483_10018928	Not Available	2413	Open in IMG/M
3300015077\|Ga0173483_10269061	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	820	Open in IMG/M
3300017997\|Ga0184610_1106201	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	894	Open in IMG/M
3300018027\|Ga0184605_10005548	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4563	Open in IMG/M
3300018028\|Ga0184608_10000011	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	38512	Open in IMG/M
3300018061\|Ga0184619_10042548	All Organisms → cellular organisms → Archaea	1955	Open in IMG/M
3300018433\|Ga0066667_10286287	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1272	Open in IMG/M
3300018466\|Ga0190268_11908310	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	541	Open in IMG/M
3300019356\|Ga0173481_10000230	All Organisms → cellular organisms → Archaea	11029	Open in IMG/M
3300019356\|Ga0173481_10026597	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1815	Open in IMG/M
3300019361\|Ga0173482_10062524	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1248	Open in IMG/M
3300019362\|Ga0173479_10114372	Not Available	1023	Open in IMG/M
3300019767\|Ga0190267_11266921	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	547	Open in IMG/M
3300019865\|Ga0193748_1012681	All Organisms → cellular organisms → Archaea	775	Open in IMG/M
3300019867\|Ga0193704_1000017	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	26356	Open in IMG/M
3300019869\|Ga0193705_1054925	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	814	Open in IMG/M
3300019870\|Ga0193746_1000502	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2543	Open in IMG/M
3300019999\|Ga0193718_1041857	All Organisms → cellular organisms → Archaea	1005	Open in IMG/M
3300021358\|Ga0213873_10125702	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	756	Open in IMG/M
3300021413\|Ga0193750_1011851	All Organisms → cellular organisms → Archaea	2189	Open in IMG/M
3300021445\|Ga0182009_10696878	Not Available	550	Open in IMG/M
3300021445\|Ga0182009_10814245	Not Available	511	Open in IMG/M
3300021510\|Ga0222621_1002376	All Organisms → cellular organisms → Archaea	2948	Open in IMG/M
3300022534\|Ga0224452_1099942	All Organisms → cellular organisms → Archaea	886	Open in IMG/M
3300022883\|Ga0247786_1155281	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	517	Open in IMG/M
3300026324\|Ga0209470_1128457	All Organisms → cellular organisms → Archaea	1122	Open in IMG/M
3300026550\|Ga0209474_10240801	Not Available	1123	Open in IMG/M
3300027765\|Ga0209073_10029081	Not Available	1697	Open in IMG/M
3300027775\|Ga0209177_10133431	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	825	Open in IMG/M
3300027809\|Ga0209574_10351100	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	515	Open in IMG/M
3300027909\|Ga0209382_10075051	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3991	Open in IMG/M
3300027909\|Ga0209382_11215523	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	770	Open in IMG/M
3300027992\|Ga0247750_1037312	Not Available	539	Open in IMG/M
3300028712\|Ga0307285_10113066	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	725	Open in IMG/M
3300028796\|Ga0307287_10081820	All Organisms → cellular organisms → Archaea	1211	Open in IMG/M
3300028814\|Ga0307302_10636614	Not Available	530	Open in IMG/M
3300028885\|Ga0307304_10055026	All Organisms → cellular organisms → Archaea	1485	Open in IMG/M
3300030496\|Ga0268240_10022649	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1201	Open in IMG/M
3300031091\|Ga0308201_10231771	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	627	Open in IMG/M
3300031093\|Ga0308197_10094901	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	871	Open in IMG/M
3300031548\|Ga0307408_101828160	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	581	Open in IMG/M
3300031903\|Ga0307407_10149824	Not Available	1515	Open in IMG/M
3300031938\|Ga0308175_100246604	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1790	Open in IMG/M
3300031996\|Ga0308176_10185178	Not Available	1943	Open in IMG/M
3300031996\|Ga0308176_11274493	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	780	Open in IMG/M
3300034131\|Ga0334911_062438	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.11%
Host-Associated	Host-Associated	12.96%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.56%
Plants	Host-Associated → Plants	12.96%
Aquatic	Environmental → Aquatic	5.56%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.19%
Sediment	Environmental → Aquatic → Sediment	5.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Phylloplane	Host-Associated → Plants → Phylloplane	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.78%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.93%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.93%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07331001	2228664021	Soil	LSIIDKEHNDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI
ICCgaii200_07357271	2228664021	Soil	VFIIDKEHNDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI
NODE_06696452	3300000156	Sugar Cane Bagasse Incubating Bioreactor	IIDKEIDDSITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLISLVQHI*
ICChiseqgaiiFebDRAFT_106737942	3300000363	Soil	MSINNPINEQLKQFENIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIIDDDLIAAAGYKIYIEHLISLAQHL*
ICChiseqgaiiFebDRAFT_112984282	3300000363	Soil	MGTKQKLEVPELLKEMNNNLDKLRKQNRLIPSDILKEAIDKMELLIIDEDLTNALGYKMYIEHLISLVQHL*
INPhiseqgaiiFebDRAFT_1017020882	3300000364	Soil	LSTNDPINEQLRRFENLKQKLEVPELQKEMNNNLDKLRKQNLLIHSDILKEAIDKMELLIIDEDSTNALGYKMYIEHLISLVQHL*
JGI11643J11755_116966051	3300000787	Soil	LSIIDKEHNDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
JGI11643J11755_117139312	3300000787	Soil	VFIIDKEHNDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
JGI11643J12802_120485042	3300000890	Soil	IIDKEHNDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
JGI10216J12902_1065069971	3300000956	Soil	MASCNSISEQLVRFENVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLI
C688J35102_1191668962	3300002568	Soil	LLSIIDKEIDDSINEQLKRFENLKQKLEEGPELQKQMTNNLDKLRRQSRLIHLDILKQLIDKTELLIIDEDMINALGYKMYIEHLISLVQHI*
Ga0062593_1000189323	3300004114	Soil	MACSNPINEQLVRFENVKQKLESPELQVEVNNNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0062590_1002085712	3300004157	Soil	LLSDANGNYINEQLKRFENLNRNLITPELQKELNNNTNKLRRQNRLIHSEILKGLIDKMELLIIDGDVVNALGYKLYIEHLISLVQHL*
Ga0062595_1000800871	3300004479	Soil	MACSNPINEQLVRFENVKQKLESPELQVEVNNNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQH
Ga0062595_1000837612	3300004479	Soil	MASGNPISEQLVRFENVKQKLESPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0062595_1002042891	3300004479	Soil	MACSNPISEQLVRFENVKQKLESPELQAEVNSNLDKLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQH
Ga0066684_101612611	3300005179	Soil	LSYVNDPINEQLKRFKQLKQKLEEGPELQREMNNNVDKLRKQNRLIHSDILKESIDKMELLIIDQDLTNALGYKMYIEHLISLIQDL*
Ga0066671_103416621	3300005184	Soil	LLSIIDKEIDDSITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLI
Ga0066676_101637962	3300005186	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALGYKMYIEHLISLAQHL*
Ga0066675_111612101	3300005187	Soil	LLSVNDKGIDASITQQLKRFENLKEKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDMINALGYKMYIEHLISLVQHI*
Ga0065704_101123971	3300005289	Switchgrass Rhizosphere	MSINNPINEQLKQFENIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIIDDDLIAAAGYKIYIEHLISLAQYL*
Ga0066670_101090431	3300005560	Soil	LLSIIDKEHNDDSVNEQLKRFENLKQKLEASPELQKQMNNNLDKFRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0081538_102230891	3300005981	Tabebuia Heterophylla Rhizosphere	MSSNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKLYIEHLISLAQHL*
Ga0079222_100137825	3300006755	Agricultural Soil	LHLLSSPDDGNSINEQLKRFEILKQKLESPELQKEININSDKLRIQNRLIHLEILKGLIDKMELLIIDAEMINALGYKMYIEHLISLVQHL*
Ga0079222_102735112	3300006755	Agricultural Soil	MASGNPISEQLMRFENVKQKLESPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0079222_103026842	3300006755	Agricultural Soil	LLSIIDKEIDDSINEQLERFENLKQKLESPELQKQMTNNLDRLRRQSRLIHSDILKQLIDKMELLIIDDQVMINALGYKMYIEHLITLVQHI*
Ga0066659_105796301	3300006797	Soil	LLSIIDKEIDDSINEQLKRFENLKQKLEEGTEIQKQMTNNLDKLRRQSRLIHLDILKQLIDKTELLIIDGEDMINALGYKMYIEHLLSLVQHI*
Ga0079221_109262751	3300006804	Agricultural Soil	LLSIIDKEIDDSINEQLERFENLKQKLESPELQKQMTNNLDRLRRQSRLIHSDILKQLIDKMELLIIDDQVMINALGYKMYIEHLITVVQHI*
Ga0079220_111660412	3300006806	Agricultural Soil	LLSSPDDGNSINEQLKRFEILKQKLESPDLQKEININSDKLRIQNRLIHLEILKGLIDKMELLIIDAEMINALGYKMYIEHLISLVQHL*
Ga0075421_1005234031	3300006845	Populus Rhizosphere	MACSNPISEQLVRFENVKQKLESPELQAEVNSNLDKLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0075433_102972252	3300006852	Populus Rhizosphere	MASCNSISEQLVRFENVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0079219_101353162	3300006954	Agricultural Soil	LLSIIDKEIDDSINEQLERFENLKQKLESPELQKEININSDKLRIQNRLIHLEILKGLIDKMELLIIDAEMINALGYKMYIEHLISLVQHL*
Ga0114129_106583472	3300009147	Populus Rhizosphere	MASGNPISEQLVRFENVKQKLESPELQAEVNSNLDKLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0126307_100341983	3300009789	Serpentine Soil	MSSNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKIYIEHLISLAQHL*
Ga0126315_107509151	3300010038	Serpentine Soil	MSSNSINEQLKQFENLKRKLETPELQQIVEKNLDKLREQNRMIHSEILKQSIDKMELLIIDEDLIAAAGYKIYIEHLISLAQHL*
Ga0126308_100214573	3300010040	Serpentine Soil	MSRNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDKMELLIIDEDLIAAAGYKIYIEHLISLAQHL*
Ga0126308_100416173	3300010040	Serpentine Soil	MSTTNNPITEQLKQFENIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIMDEDLIAAAGYKIYIEHLISIAQHL*
Ga0126314_100087081	3300010042	Serpentine Soil	MVSGNPISEQLVRFENVKQKLESPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0134128_104749542	3300010373	Terrestrial Soil	LQILLLSYVNDPINEQLKRFKQLKQKLEEGPELQREMNNNVDKLRKQNRLIHSDILKESIDKMELLIIDQDLTNALGYKMYIEHLISLIQDL*
Ga0134128_104825181	3300010373	Terrestrial Soil	ITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLISLVQHI*
Ga0134126_103353262	3300010396	Terrestrial Soil	LSIIDKQIDDSITEQLKRFENLRQKLEEGPELQKQMTNNLDKHRRQSRLIQSDILKQLIDKMELLIIDDQDIINALGYKMYIEHLISLVQHI*
Ga0134126_112179743	3300010396	Terrestrial Soil	LLSYVNDPINEQLKRFKQLKQKLEEGPELQREMNNNVDKLRKQNRLIHSDILKESIDKMELLIIDQDLTNALGYKMYIEHLISLIQDL*
Ga0138514_1000044321	3300011003	Soil	SYSDPVNEQLKRFENLKQRLEGPELQREITTNLDKFREQNRLIHSDIIKEAIDKMELLIIDEDLINALGYKMYIERLISLLQLI*
Ga0137382_110416231	3300012200	Vadose Zone Soil	MSDSKSINDQLSRFSNLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALGYKMYIEHLISLAQHL*
Ga0137365_103026291	3300012201	Vadose Zone Soil	LSTNDPINEQLRRFENLKQKLEVPELQKEMNNNLDKLRKQNLLIHSDILKESIDKMELLIIDEDLTNALGYKMYIEHLISLVQHL*
Ga0137370_103703941	3300012285	Vadose Zone Soil	LSIIDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0137367_105904513	3300012353	Vadose Zone Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKVREQNRLVHSDISMDAIDKIELLIMDEDITNALGYKMYIEH*
Ga0137366_103438752	3300012354	Vadose Zone Soil	LSIIDKEHNDPINEQLKRFENLRQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0137366_104858791	3300012354	Vadose Zone Soil	SKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDISMDAIDKIELLIMDEDITNALGYKMYIEH*
Ga0137371_111204881	3300012356	Vadose Zone Soil	LSIIDKEHNDPINEQLKRFENLRQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHL*
Ga0157304_10086452	3300012882	Soil	LSNVDKEHNDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0157285_100062531	3300012897	Soil	LYNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLICLVQHI*
Ga0157293_103344161	3300012898	Soil	LSDANGNYINEQLKRFENLNRNLITPELQKELNNNTNKLRRQNRLIHSEILKGLIDKMELLIIDGDVVNALGYKLYIEHLISLVQHL*
Ga0157296_101619071	3300012905	Soil	LSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0157286_100011874	3300012908	Soil	LSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLICLVQHI*
Ga0164308_117803951	3300012985	Soil	LSIIDKEIDDSITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLISLVQHI*
Ga0164305_115636091	3300012989	Soil	LLSIIDKEIDDSITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLISLVQHI*
Ga0157307_10072882	3300013096	Soil	LSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQNI*
Ga0182001_103217731	3300014488	Soil	SINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKLYIEHLISLAQHL*
Ga0182008_100156345	3300014497	Rhizosphere	LFIIDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0182008_100329694	3300014497	Rhizosphere	NVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL*
Ga0182008_100954632	3300014497	Rhizosphere	LLSSPDDGNSINEQLKRFEILKQKLESPELQKEININSDKLRRQNRLIHLEILKGLIDKMELLIIDAEMINALGYKMYIEHLISLVQHL*
Ga0173483_100189282	3300015077	Soil	LSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI*
Ga0173483_102690612	3300015077	Soil	LSTNDPINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHL*
Ga0184610_11062011	3300017997	Groundwater Sediment	SRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0184605_100055482	3300018027	Groundwater Sediment	MSDSKPINDQLSRFSYLKHKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0184608_100000113	3300018028	Groundwater Sediment	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0184619_100425481	3300018061	Groundwater Sediment	NDQLSRFSYLKQKLESPELQQDMNENLAKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0066667_102862872	3300018433	Grasslands Soil	LLSIIDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKFRRQNRLIHSDILKQLIDKLELLMIDQDMINALGYKMYIEHLISLVQHI
Ga0190268_119083101	3300018466	Soil	MSSNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRKIHSEVLKQSIEKMELLIIDEDLIAAAGYKIYIEHLISLAQHL
Ga0173481_1000023012	3300019356	Soil	MACSNPINEQLVRFENVKQKLESPELQVEVNNNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL
Ga0173481_100265972	3300019356	Soil	VFIIDKEHNDSINEQLKRFENLKQKLEASPELQKQINNNLDKIRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI
Ga0173482_100625241	3300019361	Soil	LLSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHI
Ga0173479_101143721	3300019362	Soil	LLSDANGNYINEQLKRFENLNRNLITPELQKELNNNTNKLRRQNRLIHSEILKGLIDKMELLIIDGDVVNALGYKLYIEHLISLVQHL
Ga0190267_112669211	3300019767	Soil	MSTNNPINEQLKQFENIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIIDEDLIAAAGYKIYIEHLISIAQHL
Ga0193748_10126811	3300019865	Soil	MPKLLFVLDIRMLMSYSDPVNEQLKRFENLKQRLEGPELQREITTNLDKFREQNRLIHSDIIKEAIDKMELLIIDEDLINALGYKMYIERLISLLQLI
Ga0193704_100001714	3300019867	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDNLKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0193705_10549252	3300019869	Soil	MSINNPINEQLKQFENIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIIDDDLIAAAGYKIYIEHLISLAQHL
Ga0193746_10005023	3300019870	Soil	MPKLLFVLDIHMFMSYSDPVNEQLKRFENLKQRLEGPELQREITTNLDKFREQNRLIHSDIIKEAIDKMELLIIDEDLINALGYKMYIERLISLLQLI
Ga0193718_10418572	3300019999	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHL
Ga0213873_101257022	3300021358	Rhizosphere	LLSDADGNYINEQLKRFENLNRNLITPELQKELNNNTDKLRRQNRLIHSEILKGLIDKMELLIIDGDVVNALGYKLYIEHLISLVQHL
Ga0193750_10118511	3300021413	Soil	LSYANDPINEQLKRFEQLKQKLEEGPELQREMSNNLDKLRKQNRLIHSDILKESIDKMELLIIDQDLTNALGYKMYIEHLISLIQDL
Ga0182009_106968781	3300021445	Soil	LLSIIDKEIDDSITEQLKRFENLKQKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDITNALGYKMYIEHLISLVQHI
Ga0182009_108142451	3300021445	Soil	MASCNSISEQLVRFENVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLINALGN
Ga0222621_10023762	3300021510	Groundwater Sediment	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDINNALRYKMYIEHLISLAQHL
Ga0224452_10999421	3300022534	Groundwater Sediment	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYVEHLISLAQHL
Ga0247786_11552811	3300022883	Soil	LLSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLISLVQHIXTLVAYADLVYISIL
Ga0209470_11284572	3300026324	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALGYKMYIEHLISLAQHL
Ga0209474_102408011	3300026550	Soil	LLSVNDKGIDASITQQLKRFENLKEKLEESPELQKQMTNNLDKLRRQSRLIHSDILKQLIDKMELLIIDDQDMINALGYKMYIEHLISLVQHI
Ga0209073_100290812	3300027765	Agricultural Soil	LLSIIDKEIDDSINEQLERFENLKQKLESPELQKQMTNNLDRLRRQSRLIHSDILKQLIDKMELLIIDDQVMINALGYKMYIEHLITLVQHI
Ga0209177_101334311	3300027775	Agricultural Soil	EQLKRFEILKQKLESPELQKEININSDKLRIQNRLIHLEILKGLIDKMELLIIDAEMINALGYKMYIEHLISLVQHL
Ga0209574_103511002	3300027809	Agave	HRPLALMASGNPISEQLVRFENVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL
Ga0209382_100750513	3300027909	Populus Rhizosphere	MACSNPISEQLVRFENVKQKLESPELQAEVNSNLDKLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL
Ga0209382_112155231	3300027909	Populus Rhizosphere	MASCNSISEQLVRFENVKQRLETPELQAEVNSNLDRLREQNRLIHSDLLKQVIDKMELLIIDGDLIHALGYKMYIEHLISLVQHL
Ga0247750_10373121	3300027992	Soil	LLSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIE
Ga0307285_101130661	3300028712	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHLXKNNILT
Ga0307287_100818201	3300028796	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISSAQHL
Ga0307302_106366141	3300028814	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDRLVHSDILKGAIDKIELLIMDEDITNALRYKMYIEHLISLAQHLXKNNILT
Ga0307304_100550263	3300028885	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDNLKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHLXKNN
Ga0268240_100226491	3300030496	Soil	MSTNNPINEQLKQFEIIKRKLESPEIQRIVDKNLDKLREQNRKIHSEVLKQSIEKMELLIIDEDLIAAAGYKIYIEHLISIAQHL
Ga0308201_102317712	3300031091	Soil	MSDSKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDNLKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHLXKNNILT
Ga0308197_100949011	3300031093	Soil	SKPINDQLSRFSYLKQKLESPELQQDMNENLDKLREQNRLVHSDILKDAIDKIELLIMDEDITNALRYKMYIEHLISLAQHL
Ga0307408_1018281601	3300031548	Rhizosphere	MSSNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKIYIEHLISLAQHL
Ga0307407_101498242	3300031903	Rhizosphere	MSSNSINEQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKI
Ga0308175_1002466043	3300031938	Soil	VLSTNDPINEQLRRFENLKQKLEVPELQKEMNNNLDKLRKQNRLIHSDILKEAIDKMELLIIDEDLTNALGYKMYIEHLISLVQHL
Ga0308176_101851781	3300031996	Soil	LLSNVDKEHNDDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKLRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLICLVQHI
Ga0308176_112744931	3300031996	Soil	LLSNVDKEHNDDSINEQLKRFENLKQKLEASPELQKQMNNNLDKFRRQNRLIHSDILKQLIDKLELLIIDQDMINALGYKMYIEHLICLVQHI
Ga0334911_062438_2_235	3300034131	Sub-Biocrust Soil	EQLKQFENLKRKLESPELQQIVEKNLDKLREQNRMIHSEILKQSIDRMELLIIDEDLIAAAGYKIYIEHLISLAQHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090231

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences