Metagenome / Metatranscriptome Family F090207

Basic Information
Family ID	F090207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	79 residues
Representative Sequence	MWRPNNLQWWILVVVALLIVFAWPPRDDKSLAAKFVNWAVDPRNELPVLPDQLPLGLGDDPDAVAAHDLQTQQYDALYL
Number of Associated Samples	98
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.88 %
% of genes near scaffold ends (potentially truncated)	98.15 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.593 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (7.407 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.741 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128 14ZMR_04821680 2Ga0055477_102814732 3Ga0055439_100719242 4Ga0055480_102931391 5Ga0062589_1005559531 6Ga0062595_1012076482 7Ga0062592_1020562151 8Ga0062594_1031541061 9Ga0066678_109573781 10Ga0066676_105882871 11Ga0070677_105880392 12Ga0070677_108773391 13Ga0070666_105864102 14Ga0070671_1012787772 15Ga0070711_1012514182 16Ga0070694_1011098382 17Ga0066686_106200671 18Ga0070699_1013037352 19Ga0073909_105369461 20Ga0070672_1018598721 21Ga0070695_1000047877 22Ga0070695_1000226194 23Ga0070695_1007142922 24Ga0070696_1004968842 25Ga0070704_1000324825 26Ga0066707_106993942 27Ga0066905_1018106262 28Ga0068866_101568371 29Ga0066903_1044713381 30Ga0068858_1014161742 31Ga0068862_1016958602 32Ga0075417_101874961 33Ga0066653_100125984 34Ga0075421_1008980962 35Ga0073928_107185342 36Ga0066710_1030157272 37Ga0099828_120158682 38Ga0105245_127748221 39Ga0066709_1029771401 40Ga0066709_1035453711 41Ga0114129_118777311 42Ga0075423_115972931 43Ga0075423_116395601 44Ga0105164_106617792 45Ga0105071_10244912 46Ga0105087_10785212 47Ga0126319_15765462 48Ga0126306_109896451 49Ga0134067_100382803 50Ga0134071_105489982 51Ga0134127_126592331 52Ga0134122_101289161 53Ga0134122_116592052 54Ga0134123_105217303 55Ga0134123_120742392 56Ga0137392_110519961 57Ga0137393_106797962 58Ga0137387_101331631 59Ga0137397_100567091 60Ga0137419_116957492 61Ga0134076_104408992 62Ga0134081_100425452 63Ga0157380_118167482 64Ga0132257_1044992202 65Ga0132255_1049179791 66Ga0134112_105246172 67Ga0163161_106097791 68Ga0184623_104025511 69Ga0184611_11818131 70Ga0066655_101492121 71Ga0066667_103263062 72Ga0066662_127421771 73Ga0210382_100935711 74Ga0210382_103817732 75Ga0210402_120243372 76Ga0247799_11005762 77Ga0209320_100660791 78Ga0209324_100660051 79Ga0209431_100354554 80Ga0209520_101936122 81Ga0209341_104924701 82Ga0210123_11644301 83Ga0207643_105298712 84Ga0207681_116238841 85Ga0207706_100230056 86Ga0207709_105281252 87Ga0207709_115578461 88Ga0207669_114410352 89Ga0207651_108483831 90Ga0207648_105925482 91Ga0207648_121748202 92Ga0209801_11547572 93Ga0255058_106563041 94Ga0209488_109994182 95Ga0268265_102525623 96Ga0268264_125333672 97Ga0307292_101516321 98Ga0307312_100783103 99Ga0307500_100539181 100Ga0310886_104423702 101Ga0310892_101045521 102Ga0326597_108384112 103Ga0310897_100769603 104Ga0310889_104659491 105Ga0307472_1008537871 106Ga0306920_1043610582 107Ga0310810_101386893 108Ga0364932_0115728_3_257
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128 14ZMR_04821680 2Ga0055477_102814732 3Ga0055439_100719242 4Ga0062589_1005559531 5Ga0062595_1012076482 6Ga0062592_1020562151 7Ga0066678_109573781 8Ga0066676_105882871 9Ga0070677_105880392 10Ga0070677_108773391 11Ga0070711_1012514182 12Ga0066686_106200671 13Ga0070695_1000047877 14Ga0070695_1007142922 15Ga0066905_1018106262 16Ga0068858_1014161742 17Ga0068862_1016958602 18Ga0075421_1008980962 19Ga0073928_107185342 20Ga0066709_1029771401 21Ga0114129_118777311 22Ga0105164_106617792 23Ga0105071_10244912 24Ga0126319_15765462 25Ga0134122_101289161 26Ga0134123_105217303 27Ga0134123_120742392 28Ga0137392_110519961 29Ga0137393_106797962 30Ga0137387_101331631 31Ga0137419_116957492 32Ga0157380_118167482 33Ga0132255_1049179791 34Ga0134112_105246172 35Ga0163161_106097791 36Ga0210382_100935711 37Ga0209320_100660791 38Ga0209324_100660051 39Ga0209341_104924701 40Ga0255058_106563041 41Ga0268264_125333672 42Ga0307500_100539181 43Ga0326597_108384112 44Ga0306920_1043610582 45Ga0310810_101386893
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1Ga0075417_101874961 24ZMR_04821680 3Ga0055439_100719242 4Ga0055480_102931391 5Ga0062589_1005559531 6Ga0062594_1031541061 7Ga0066678_109573781 8Ga0066676_105882871 9Ga0070671_1012787772 10Ga0070711_1012514182 11Ga0070699_1013037352 12Ga0070672_1018598721 13Ga0070695_1000226194 14Ga0066905_1018106262 15Ga0066903_1044713381 16Ga0068858_1014161742 17Ga0068862_1016958602 18Ga0075421_1008980962 19Ga0073928_107185342 20Ga0099828_120158682 21Ga0105245_127748221 22Ga0066709_1029771401 23Ga0075423_115972931 24Ga0075423_116395601 25Ga0105164_106617792 26Ga0105071_10244912 27Ga0105087_10785212 28Ga0134071_105489982 29Ga0134127_126592331 30Ga0134122_101289161 31Ga0134123_105217303 32Ga0134123_120742392 33Ga0137392_110519961 34Ga0137393_106797962 35Ga0137387_101331631 36Ga0137397_100567091 37Ga0134076_104408992 38Ga0134081_100425452 39Ga0132257_1044992202 40Ga0184611_11818131 41Ga0210382_100935711 42Ga0210402_120243372 43Ga0209520_101936122 44Ga0209341_104924701 45Ga0207643_105298712 46Ga0207706_100230056 47Ga0207669_114410352 48Ga0255058_106563041 49Ga0268265_102525623 50Ga0307312_100783103 51Ga0307500_100539181 52Ga0310886_104423702 53Ga0310892_101045521 54Ga0307472_1008537871 55Ga0306920_1043610582 56Ga0310810_101386893
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.99% β-sheet: 0.00% Coil/Unstructured: 57.01%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13620	CarboxypepD_reg	4.63
PF01436	NHL	3.70
PF03544	TonB_C	3.70
PF04909	Amidohydro_2	2.78
PF05336	rhaM	2.78
PF13519	VWA_2	1.85
PF13432	TPR_16	1.85
PF01522	Polysacc_deac_1	1.85
PF04972	BON	1.85
PF00144	Beta-lactamase	1.85

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	3.70
COG3254	L-rhamnose mutarotase	Cell wall/membrane/envelope biogenesis [M]	2.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.85
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.85
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0372	Citrate synthase	Energy production and conversion [C]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.26 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	7.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.93 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.93 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.93 %
Unclassified	root	N/A	7.41 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	7.41 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300027872\|Ga0255058_10656304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
2170459017\|G14TP7Y01BJXWI	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300004002\|Ga0055477_10281473	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300004019\|Ga0055439_10071924	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300004055\|Ga0055480_10293139	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300004156\|Ga0062589_100555953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300004479\|Ga0062595_101207648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300004480\|Ga0062592_102056215	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300005093\|Ga0062594_103154106	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300005181\|Ga0066678_10957378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M

Showing 1 to 10 of 107 entries

Previous1 2 3 4 5…11Next

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.93%
Environmental	Environmental	72.22%
Host-Associated	Host-Associated	26.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	11.11%
Plants	Host-Associated → Plants	26.85%
Solid Waste	Engineered → Solid Waste	0.93%
Terrestrial	Environmental → Terrestrial	61.11%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Grass	Engineered → Solid Waste → Grass	0.93%
Marine	Environmental → Aquatic → Marine	4.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Sediment	Environmental → Aquatic → Sediment	1.85%
Soil	Environmental → Terrestrial → Soil	60.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.93%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Gulf	Environmental → Aquatic → Marine → Gulf	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Sand	Environmental → Terrestrial → Soil → Sand	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.70%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.11%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.63%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.63%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.48%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.93%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300004002	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004055	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M

Showing 1 to 10 of 98 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04821680	2170459017	Switchgrass, Maize And Mischanthus Litter	VTRQPAGPGPGFQWWLLIAIALAIVAVWPPDQDRSLAVKFVNWAVDPRDELPVLPDQLALGLGDEPEAVAAHDAVTRHYDALYAK
Ga0055477_102814732	3300004002	Natural And Restored Wetlands	MWQPTRFQWWLLLAVALFIVVAWPPRDDKSLAVKLVNWAVDPWDTLPVLPGPLPMRFGDDPNAVLVHDL
Ga0055439_100719242	3300004019	Natural And Restored Wetlands	MRHLNNSQWWFLLIVALLIVFLWPPRDNKSLAIKFVNWAVDPWDQLPPPVGPLPLRAGDDPYAVEAHDILMQQYEMLYNKGGWTRMRLRLK
Ga0055480_102931391	3300004055	Natural And Restored Wetlands	MWQPTRFQWWLLLAVALFIVVAWPPRDDKSLAVKLVNWAVDPWDTLPVLPGPLPMRFGDDPNAVLVHDLETQRYDQLYRRGGWTRV
Ga0062589_1005559531	3300004156	Soil	MWQPNNFQWWILVIVALFIVVVWPPAEDRSLAFKFVNWVVDPSGELPVLPPQLGFGVGDDPAAVAEHDAQVQHYDELYARGGWTRKRL
Ga0062595_1012076482	3300004479	Soil	MSWRPWQPTNVQWWLIVVVAVFVVCAWPPGDDKSLAVKFVNWVVDPRGELPILPDQLALGRGDDPDAVDARDLQVQKYDALY
Ga0062592_1020562151	3300004480	Soil	MRQPDNFHWWLLVVLSVLIVSAWPPRDDKSLAAKFVNWAVDPTNALPTLPDQLALGQGDDPDKVYAHDLQVQQYDALYL
Ga0062594_1031541061	3300005093	Soil	MRQPDNVHWWLLVVFSVLIVSAWPPRDDKSLAAKFMNWAVDPANALPTLPDQLVLGQGDDPDKVYEHDLQVQQYDALYLKGGWTRRRLEWKVAGD
Ga0066678_109573781	3300005181	Soil	MWRPNNLQWWFLVVVALLIVFVWPPAEDKSLAVKFVNWAVDPRDELPVLPEQLALGLGDDPVAVAAHVLQTQQYDALYLKGGWTR
Ga0066676_105882871	3300005186	Soil	MNKFTFSVVVVVALTIVSVWPPEDDRSLAVKFVNWIVDPLDALPVLPPQLALGRGDDPEAVEARDLQTQQYDALYLKGGW
Ga0070677_105880392	3300005333	Miscanthus Rhizosphere	MNNLQWWTLAVCAVLIVAAWPPRDGKSLGAKFVNWAVDPRNELPTLPGQLALGSGDDPDAVNARDMQVQQYDALHLKGGWTRKRLELKVV
Ga0070677_108773391	3300005333	Miscanthus Rhizosphere	MWRPNNSQWWVLVIVALLIVFVWPPSGDRSLAVKFVNWSVDPWNELPVLPEQLSLGLG
Ga0070666_105864102	3300005335	Switchgrass Rhizosphere	MWRPNNFQWWLLVIVALLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAV
Ga0070671_1012787772	3300005355	Switchgrass Rhizosphere	MWRPNNFQWWLLVIVALLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAVAAHDEQTQHYDALYLKGGWT
Ga0070711_1012514182	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRHWWVLIAIALAIVFVWPPDADRSLAVKFVNWAVDPRDELPVLPEQLVLGLGDDPDAVAAHDAVTRHYDALYAGGG
Ga0070694_1011098382	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPQWQSTNVQWWLVVIVALFVVCAWPPGDDKSLAVKFVNWAVDPRGELPILPDQLALGRGDDPDAVFARDLQVQQYDAL
Ga0066686_106200671	3300005446	Soil	MWQPNKSQWWILVVVALLIVFVWPPSGDKSLAVKFVNWAADPKGELPILPDQLALGLGDDPDVVNAHDLRVQQYDALYLK
Ga0070699_1013037352	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPQWQSTNVQWWLVVIVALFVVCAWPPGDDKSLAVKFVNWAVDPRGELPILPDQLALGRGDDPDAVFARDLQVQQYDALYLKG
Ga0073909_105369461	3300005526	Surface Soil	MWRPNNFQWWLLVIVALLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAVAAHDLQTQQYDALYLKGGWTR
Ga0070672_1018598721	3300005543	Miscanthus Rhizosphere	MWQPNTSQWWLLVVCSVLIVGAWPPRDGKSLAAKFVNWAVDPRNELPTLPDQLALGAGDDPDAVNARDLQVQQYDALYLKG
Ga0070695_1000047877	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWRPGNVQWWSLVVVALLIVFAWPPRDDKSLAAKFVNWAVDPRNELPVLPDQLPLGLGDDPDAVAAHDL
Ga0070695_1000226194	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNNLQWWTLAVCAVLIVAAWPPRDGKSLGAKFVNWAVDPRNELPTLPGQLALGSGDDPDAVNARDMQVQQYDALYLKGGWTRKRLELKV
Ga0070695_1007142922	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VWRPNNFQWWILVVVALLIVFAWPPADDKSLAVKFVNWSVDPWGELPVLPDELALGLGDDPDAVAVHDQQTQQYDALYLKGGWTRRRLLLKVARDPI
Ga0070696_1004968842	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPQWQPTNVQWWLIVIVALFVVCAWPPGDDKSLAVKFVNWAVDPRGELPILPDQLALGRGDDPDAVFARDLQVQQYDALYLKGGWT
Ga0070704_1000324825	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWRPVNVQWWSLVVVALLIVFAWPPRDDKSLAAKFVNWAVDPRNELPVLPDQLPLGLGDDPDAVAAHDLQTQQYDALYLKGGWTRKRLE
Ga0066707_106993942	3300005556	Soil	MWQPNKSQWWILVVVALLIVFVWPPSGDKSLAVKFVNWAADPKGELPILPDQLALGLGDDPDVVNAHDLRVQQYDALYLKGGWTRKRLELKVARDPFNPS
Ga0066905_1018106262	3300005713	Tropical Forest Soil	MWQPNVVQWRILAVVTLLIVFAWPPQDDRSLAMKIVNWAVDPRNELPVLPDPLALGHGDDPDAVAEHDLQVQRYDELYLKGGWTR
Ga0068866_101568371	3300005718	Miscanthus Rhizosphere	MRQPDNVHWWLLVVFSVLIVSAWPPRDDKSLAAKFLNWAVDPANALPTLPDQLVLGQGDDPDKVYEHDLQVQQYDALYLKG
Ga0066903_1044713381	3300005764	Tropical Forest Soil	MTRHWWMLIAIALAIVVVWPPDQDRSLAVKFVNWAVDPRDALPVLPAQLALGLGDDPDSVAAHDAVTRQYDALYAEGGWTRR
Ga0068858_1014161742	3300005842	Switchgrass Rhizosphere	MWRPNNSQWWLLAVCSVLIVSAWPPRDDKSLAAKIVNWAVDPTNQLPVLPDQLALGHGDDPDKVEARDRQVQQYDALYLKGGWTRTRLALKVAGDPFD
Ga0068862_1016958602	3300005844	Switchgrass Rhizosphere	MWQPNNSQWWLLAVSALLIVSAWPPRDDKSLAAKFVNWAVDPTNELPILPDQLALGLGDDPDQ
Ga0075417_101874961	3300006049	Populus Rhizosphere	MWRPNNLQWWILVVVALLIVFAWPPRDDKSLAAKFVNWAVDPRNELPVLPDQLPLGLGDDPDAVAAHDLQTQQYDALYL
Ga0066653_100125984	3300006791	Soil	MWQPNKSQWWILVVVALLIVFVWPPSGDKSLAVKFVNWAADPKGELPILPDQLALGLG
Ga0075421_1008980962	3300006845	Populus Rhizosphere	VSLPLIPPKPWQWWSLLVAALAIVVLWPPQGDRSLATKFVNWAVDPLNQLPVLPEQLPLGQGDDLQAVNERDALVQQYDALYLKGGWIRKR
Ga0073928_107185342	3300006893	Iron-Sulfur Acid Spring	MTSVTTHWWLLITIALLIVCVWPPADDKSLAVKLINWAVDPLDRLPLLPAQFALGEGDDPEVVARHDMQVQQYDALYL
Ga0066710_1030157272	3300009012	Grasslands Soil	VTRPQWQPTNVQWWLIVIVAVFVVCAWPPGDDKSLAVKFVNWVVDPRGELPILPDQLVLGRGDDPDAVYARDLQVQQYDALYLKGGWTRRRLQLKVA
Ga0099828_120158682	3300009089	Vadose Zone Soil	MWHPNKLPWWLVVVALLIVFVWPPSDDKSLAVKFVNWAVDPRGELPILPDQLTLGRGDDPDAVNARDLQVQQYDALYLK
Ga0105245_127748221	3300009098	Miscanthus Rhizosphere	MRQPDNAHWWLLVVFSVVIVALWPPRDDKSLAAKFVNWAVDPTNALPTLPDQLVLGQGDDPDKVYAHDLQVQQYDALFLKGGWTRK
Ga0066709_1029771401	3300009137	Grasslands Soil	VWRPNSSQWWLLVIVALLIVFAWPPRDDKSLAVKFVHWIVDPWDEWPVLPVQLALGAGDD
Ga0066709_1035453711	3300009137	Grasslands Soil	MWRPNNLQWWFLVVVALLIVFVWPPADDKSLAVKFVNWAVDPRDELPVLPEQLALGLGDDPVAVAAHDLQTQQYDALYLKG
Ga0114129_118777311	3300009147	Populus Rhizosphere	MWQPNNAQWWILAVVTLLIVFAWPPQGDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDDPDA
Ga0075423_115972931	3300009162	Populus Rhizosphere	MWRPSNVHWWVLVIVALLIVFVWPPRDDRSLAAKFVNWAVDPGNELPILPGQLPPGLGDDPDAVAAHDLQTQQYDA
Ga0075423_116395601	3300009162	Populus Rhizosphere	MLQPNNLQWWTLVVCAVLIAVAWPPRDGKSLGAKFVNWAVDPANELPTLPDQLAFGHGDDPDAVNARDMQVQQYDALYLKGGWTRKRLELKVAG
Ga0105164_106617792	3300009777	Wastewater	MWRPNNFQWWLFAIVALLIVFVWPPGDDTSLAVTFVNWAVDPRSELPVLPRQLALGVGDDPDAVAAHDLQTQQY
Ga0105071_10244912	3300009808	Groundwater Sand	MTTVEVWRPSNAQWWFLVLVALFIVAAWPPRDGKSLAMKFVNWVVDPRNELPVLPEQLPMGLGDDPAAVNEHDALVRQYDALYLEG
Ga0105087_10785212	3300009819	Groundwater Sand	MLRPNNLQWWFLIVVALLIVFVWPPSEDKSLAAKFVNWAVDPRDVLPVLPPQLGFGVGDDPDAVYVHDLQVQQYDALYMK
Ga0126319_15765462	3300010147	Soil	MLFVILAWPPEGDRSLIAKFVNWAVDPAGELPILPPQLGYGLGDDPVAVEERDAQVRRYDELYNQGGWTRKRLELKVAGD
Ga0126306_109896451	3300010166	Serpentine Soil	MWQPNNSQWWLLVVFSVLIVAAWPPGDGKSLAAKFVNWVVDPMNQLPTLPDQLALGTGDDPDAVN
Ga0134067_100382803	3300010321	Grasslands Soil	MWQPNNVQWWMLAVVTLVIVCAWPPQDDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDD
Ga0134071_105489982	3300010336	Grasslands Soil	MWRPNNFQWWVLLIVALLIVVVWPPRDDKSLAAKFVNWAVDPRNELPVLPEQLPLGLGDDPGAVAAHDLRTQQYDALYLK
Ga0134127_126592331	3300010399	Terrestrial Soil	MATRCYSLGVWRPNNFQWWILVVVALLIVFVWPPMDDKSLAAKFVNWSVDPWDELPVLPEQLSLGLGDDPDAVAAHDQQTQQYDALYLKGGWTRRRLELKVA
Ga0134122_101289161	3300010400	Terrestrial Soil	VTRPQWQPANVQWWLIVIVALFVVCAWPPGDDKSLAVKFVNWAVDPRGALPTLPDQLALGMGDDPDAVNERDL
Ga0134122_116592052	3300010400	Terrestrial Soil	VWRPNNFQWWLLVIVALLIVFAWPPQDDKSLAVKLVNWSVDPWDELPVLPDQLALGLGDDPDAVAAHDLQTQ
Ga0134123_105217303	3300010403	Terrestrial Soil	MWQPNNLQWWILVIVALFIVFVWPPAEDRSLAFKFVNWAVDPRDELPVLPEQLGFGIGDDPAAVA
Ga0134123_120742392	3300010403	Terrestrial Soil	VRWQPTDLQWWLLVIVAMFVVMAWPPRDDQSLAVKLVNWAVDPGGQLPTLPDQLALGKGDDPDAVYARDLQVQKYDALYL
Ga0137392_110519961	3300011269	Vadose Zone Soil	MWRRDNSQWWLLVIVALLTVFVWPPSDDKSLAAKFVNWVVDPRDELPTRPDPLGLGAGDEPNAVAEHDM
Ga0137393_106797962	3300011271	Vadose Zone Soil	MLRSGNFQWWLLVIVALLIVFVWPPGDDKSLAAKLVNWVVDPRGELPTLPDPLGLGAGDEPNAVAEHDMVAQQYDALYIKGGWT
Ga0137387_101331631	3300012349	Vadose Zone Soil	MWQPNTFQWWLLVVVALAVVFVWPPSDDKSLAVKFVNWAVDPRDELPVLPDPLALGQGDNPDAVY
Ga0137397_100567091	3300012685	Vadose Zone Soil	MWQPNKLQWWLLVIVAVLIVCAWPPGDDKSLAVTFVNWAVDPRSELPILPDQLALGLGDEPDAVTARDLRVQQYDA
Ga0137419_116957492	3300012925	Vadose Zone Soil	VWRPNNFQWWILVVVALLIVFAWPPADDKSLAVKLVNWSVDPWDELPVLPDELA
Ga0134076_104408992	3300012976	Grasslands Soil	MWQPNTFQWWILVLVALLIVFVWPPSGDKSLAVKFVNWAADPKGELPILPDQLALGLGDDPDVVNAHDLRVQQYDALYLKGGWTRKRLELKVARDPFNP
Ga0134081_100425452	3300014150	Grasslands Soil	MWQPNNVQWWMLAVVTLVIVCAWPPQDDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDDPDAVAEHDVQVQRYDEMYLR
Ga0157380_118167482	3300014326	Switchgrass Rhizosphere	MWQPNTSQWWLLVVCSVLIVGAWPPRDGKSLAAKFVNWAVDPRNELPTLPDQLALGAGDDPDAVNARDMQVQQ
Ga0132257_1044992202	3300015373	Arabidopsis Rhizosphere	MWRPNNLQWWLLVVVALLIVFVWPPSGDRSLAVKFVNWAVDPQNVLPTLPDQLPLGLGDDPDAVNAHDLQTQQYDALYLKGGWIRKRLE
Ga0132255_1049179791	3300015374	Arabidopsis Rhizosphere	MWQPTKGQWWVLVIVALGIVFAWPPRDDKSLAVKFVNWVVDPTDQLPLLPPPLPLGM
Ga0134112_105246172	3300017656	Grasslands Soil	MARSMWQPNNVQWWMLAVVTLVIVCAWPPQDDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDDPDAVADHDVQVQRYDEMYLRGGWTRKRLELKVARDPF
Ga0163161_106097791	3300017792	Switchgrass Rhizosphere	MRQPDNVHWWLLVVFSVLIVSAWPPRDDKSLAAKFLNWAVDPANALPTLPDQLVLGQG
Ga0184623_104025511	3300018056	Groundwater Sediment	VWRPNNFQWWVLVIVALLIVFAWPPTDDKSLAVKFVNWAVDPWNELPVLPDQLALGLGDDPD
Ga0184611_11818131	3300018067	Groundwater Sediment	MWRPNNSQWWVLVSVALLIVFVWPPSGDRSLAVKFVNWSVDPWNELPVLPEQLSLGLGDDPDA
Ga0066655_101492121	3300018431	Grasslands Soil	MARSMWQPNNVQWWMLAVVTLVIVCAWPPQDDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDDPDAVAEHDVQVQRYDEMYLKGG
Ga0066667_103263062	3300018433	Grasslands Soil	MARSMWQPNNVQWWMLVVVTLLIVFAWPPQDDRSLAMKIVNWAVDPDGTLPVLPDPLALGHGDDPDAVAEHDVQVQRYDEMYL
Ga0066662_127421771	3300018468	Grasslands Soil	MARSMWQPNNVQWWMLVVVTLLIVFAWPPQDDRSLAMKIVNWAVDPDGTLPVLPDPLALGHGDDPDA
Ga0210382_100935711	3300021080	Groundwater Sediment	VRSLPRPTDLQWWLIVVVAVFVVCAWPPGDDKSLAVKFVNWVVDPRGELPILPDQLALGRGDDPDAVDARDVQVQKYDALYLKGGWTRRRLELKVARDPFDP
Ga0210382_103817732	3300021080	Groundwater Sediment	VWRPNNFQWWILVVVALLIVFAWPPADDKSLAVKFVNWSVDPWDELPVLPDQLALGLGD
Ga0210402_120243372	3300021478	Soil	VWRPDNFQWWLLVVVALLLVFVWPPSDDKSLAAKFVNWAVDPRDELPILPDPLGPRAGDEPTA
Ga0247799_11005762	3300023072	Soil	MWQPNNFQWWILVIVALFIVVVWPPAEDRSLAFKFVNWVVDPSGELPVLPPQLGFGVGDDPAAVAEHDAQVQHYDELYARGGWTRKRLELKVATDP
Ga0209320_100660791	3300025155	Soil	MYVLSQTPPMWRPSNSQWWVLVIVALLIVFSWPPRDDKSLAFKLVNWAVDPWDDLPILPDPLP
Ga0209324_100660051	3300025174	Soil	MWRPSNSQWWFLVIVALLIVFLWPPRDDKSLAFKLANWAVDPWDDLPILPDQLPLGAGDDPEAVSLGGVGQAV
Ga0209431_100354554	3300025313	Soil	MYVLSQTPPMWRPSNSQWWVLVIVALLIVFLWPPRDDKSLAFKLVNWAVDPWDDLPILPDQLPLGAGDDPEAVSIHD
Ga0209520_101936122	3300025319	Soil	MWRPSNSQWWFLVIVALLIVFLWPPRDDKSLAFKLANWAVDPWDDLPILPDQLPLGAGDDPEAVSLHDILTQQYDALYQ
Ga0209341_104924701	3300025325	Soil	MRPTNSQWWFLLLVALLIVFLWPPRDNQSLAVKFVNWAVDPWDELPIEPEPLPLGSGDNPQAVELHDILMQQYDALYLKGGWTRRRL
Ga0210123_11644301	3300025823	Natural And Restored Wetlands	MWQPTRFQWWLLLAVALFIVVAWPPRDDKSLAVKLVNWAVDPWDTLPVLPGPLPMRFGDDPNAVLVHDLETQRYDQLYRRGGW
Ga0207643_105298712	3300025908	Miscanthus Rhizosphere	MWQPNNLQWWILAVCAVLIVTAWPPSEGKSLAAKFVNWAVDPMNQLPTLPDQLSLGSGDDPDAVNARD
Ga0207681_116238841	3300025923	Switchgrass Rhizosphere	MRQPDNFHWWLLVVFSVLIVSAWPPRDDKSLAAKFLNWAVDPANALPTLPDQLALGHGDDPDKVYEHDLQVQQYDA
Ga0207706_100230056	3300025933	Corn Rhizosphere	MWQPNTSQWWLLVVCSVLIVGAWPPRDGKSLAAKFVNWAVDPRNELPTLPDQLALGAGDDPDASTRATCRCNSTTRCI
Ga0207709_105281252	3300025935	Miscanthus Rhizosphere	MRQPDNVHWWLLVVFSVLIVSAWPPRDDKSLAAKFLNWAVDPANALPTLPDQLVLGQGDDPDKVYEHDLQVQQYDAL
Ga0207709_115578461	3300025935	Miscanthus Rhizosphere	MWRPNNFQWWLLVIVVLLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAVAAHDL
Ga0207669_114410352	3300025937	Miscanthus Rhizosphere	MWQPNNSQWWLLAVFSVLIVAAWPPGDGKSLAAKFVNWVVDPMNQLPTLPDQLALGSGDDPDAVNARDIQVQQYDALYLRGG
Ga0207651_108483831	3300025960	Switchgrass Rhizosphere	MWQPNTSQWWLLVVCSVLIVGAWPPRDGKSLAAKFVNWAVDPRNELPTLPDQLALGAGDDPDAVNAR
Ga0207648_105925482	3300026089	Miscanthus Rhizosphere	MWRPNNFQWWLLVIVALLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAVAAHDLQTQQYDALYLKGGWTRRRLELKVAGDP
Ga0207648_121748202	3300026089	Miscanthus Rhizosphere	VWRPNNFQWWLLVIVALLIVFAWPPRDDKSLAVKFVNWSVDPWDELPVLPDQLALGLGDDPDAVA
Ga0209801_11547572	3300026326	Soil	MARSMWQPTNVQWWMLAVVTLLIVFAWPPQDDRSLAMKIVNWAVDPAGTLPVLPDPLALGHGDDPDAVAEHDVQVQRYDEMYLKGGWT
(restricted) Ga0255058_106563041	3300027872	Seawater	MWQPTNFQWWFLIIVAILIVFAWPPRDNRSLALKFVNWVVDPWDELPVLPDQLPLGAGDDPEAVSIHDIQ
Ga0209488_109994182	3300027903	Vadose Zone Soil	MWQPNKLQWWLLVIVALLIVCAWPPGDDKSLAVTFVNWAVDPRSELPILPDQLALGLGDDPDAVTARDL
Ga0268265_102525623	3300028380	Switchgrass Rhizosphere	MWHPNNAQWWLLLVCSLLIVAAWPPRDDKSLAAKFVNWAVDPANELPILPEQLALGQGDDPDKV
Ga0268264_125333672	3300028381	Switchgrass Rhizosphere	MSRQWWVLIAIALAIVFVWPPDGDRSLAAKFVNWAVDPRDELPVLPEQLALGLGDDPDAVAAHDAVTRHYDALYAEGGWTRRRLELKVATDPFNKSTERQLL
Ga0307292_101516321	3300028811	Soil	VTRPQWQPTNVQWWLIVVVAVFVVCAWPPGDDKSLAVKVVNWVVDPRGELPILPDQLALGRGDDPDAVDARDLQVQKYDALYLKGGWIRR
Ga0307312_100783103	3300028828	Soil	MWQPSNSQWWLLVVFSVLIVSAWPPRDDKSLAAKLVNWAVDPANELPILPDQLALGQGDDPDKVYAHDLQVQQYDALY
Ga0307500_100539181	3300031198	Soil	MWRPNNLQWWVLVSVALFVVFTWPPAEDRSLAIKIVNWAVDPWDRLPVLPEQLGFGVGDDPIAVAEHDAAVQHYDELYQRGG
Ga0310886_104423702	3300031562	Soil	MWQPNNLQWWIFVIVALFIIFVWPPADDRSLAFKFVNWAVDPRNELPVLPPQLGFGVGDDPVAVAEHDAQVQHYDELYAQGGWTRKRLELKVATD
Ga0310892_101045521	3300031858	Soil	LQPTTRWWPLFGVILFVILAWPPEGDRSLMAKFVNWAVDPAGELPVLPPQLGYGLGDDPVAVEERDAQVRRYDDLYNQGGWTRRRLELKVAG
Ga0326597_108384112	3300031965	Soil	VTMYVLSQTPPMWRPSNSQWWFLVIVALLIVFLWPPRDDKSLAFKLVNWAVDPWDDLPILPDQLPLGAGDDPEAVSIHDILSQQYDALYQKG
Ga0310897_100769603	3300032003	Soil	MWQPNNLQWWILVIVALFIIFVWPPADDRSLAFKFVNWAVDPRNELPVLPPQLGFGVGDDPVAVAEHDAQVQHYDELYA
Ga0310889_104659491	3300032179	Soil	MWQPNNLQWWILVIVALFIIFVWPPADDRSLAFKFVNWAVDPRNELPVLPPQLGFGVGDDPVAVAEHDAQVQHYDELYAQGGWTRKRLELKVATDPF
Ga0307472_1008537871	3300032205	Hardwood Forest Soil	VWRPNNFQWWILVVAALLIVFAWPPADDKSLAVKFVNWSVDPRDELPVLPDQLALGLGDDPDAVAAHDQLTQQYDALYLKGGWTRSRL
Ga0306920_1043610582	3300032261	Soil	LTMPQANRWWWVFLLFALALVAAWPPVGDKSLAAKFVNWVVDPRGELPVLPDPLALGLGDDPAAVAAHDEQVQRYDALYVKGGWTRRRLELKVAADPFNPA
Ga0310810_101386893	3300033412	Soil	VWQPTNRQWWVLVVVVLFVIAAWPPQDDRSLAAKFVNWAVDPSDALPVLPDQLGLGEGDNPDAVNARDIQVQQYDALHAKGGWTRQRLLLKVAR
Ga0364932_0115728_3_257	3300034177	Sediment	MWRPSNSQWWLLVIVAMLTVFSWPPRDDKSLAFKLANWAVDPWDDLPILPDQLPLGAGDDPEAVSIHDVLTQQYDALYQKGGWTR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters