 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F090120 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 108 |
| Average Sequence Length | 47 residues |
| Representative Sequence | MKNRFIASFAVLTLALAGALTISVQAQTTEEGPGPSEQPSAPMEM |
| Number of Associated Samples | 92 |
| Number of Associated Scaffolds | 108 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 86 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.45 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.963 % of family members) |
| Environment Ontology (ENVO) | Unclassified (26.852 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (50.926 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Fibrous | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 32.88% β-sheet: 0.00% Coil/Unstructured: 67.12% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.45 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 108 Family Scaffolds |
|---|---|---|
| PF02954 | HTH_8 | 35.19 |
| PF00848 | Ring_hydroxyl_A | 9.26 |
| PF05016 | ParE_toxin | 5.56 |
| PF01402 | RHH_1 | 3.70 |
| PF02518 | HATPase_c | 3.70 |
| PF12840 | HTH_20 | 1.85 |
| PF00072 | Response_reg | 0.93 |
| PF00873 | ACR_tran | 0.93 |
| PF14572 | Pribosyl_synth | 0.93 |
| PF08327 | AHSA1 | 0.93 |
| PF01255 | Prenyltransf | 0.93 |
| PF01408 | GFO_IDH_MocA | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
|---|---|---|---|
| COG4638 | Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit | Inorganic ion transport and metabolism [P] | 18.52 |
| COG0020 | Undecaprenyl pyrophosphate synthase | Lipid transport and metabolism [I] | 0.93 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 12.96% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 11.11% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 7.41% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.56% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 4.63% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.63% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 4.63% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.63% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 4.63% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 4.63% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 2.78% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.78% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.78% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 2.78% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 1.85% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.85% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.85% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.85% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 1.85% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 1.85% |
| Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 0.93% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.93% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.93% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.93% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.93% |
| Biofilm | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm | 0.93% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.93% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001471 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 | Environmental | Open in IMG/M |
| 3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005541 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 | Environmental | Open in IMG/M |
| 3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
| 3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009644 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014654 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG | Environmental | Open in IMG/M |
| 3300014657 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG | Environmental | Open in IMG/M |
| 3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
| 3300017925 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40 | Environmental | Open in IMG/M |
| 3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017995 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1 | Environmental | Open in IMG/M |
| 3300018023 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100 | Environmental | Open in IMG/M |
| 3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300019786 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction) | Environmental | Open in IMG/M |
| 3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021476 | Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2) | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300021860 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
| 3300025320 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025406 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300025412 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300025414 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300025463 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027080 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes) | Environmental | Open in IMG/M |
| 3300027767 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027898 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
| 3300028037 | Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 | Environmental | Open in IMG/M |
| 3300028566 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2 | Environmental | Open in IMG/M |
| 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Host-Associated | Open in IMG/M |
| 3300028808 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2 | Environmental | Open in IMG/M |
| 3300028866 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2 | Environmental | Open in IMG/M |
| 3300030045 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3 | Environmental | Open in IMG/M |
| 3300030054 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1 | Environmental | Open in IMG/M |
| 3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
| 3300031524 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3 | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300033887 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12712J15308_101331791 | 3300001471 | Forest Soil | MSARLEEVDSIMKNRLLKIFAVLILALAGAFSIGAMAQTTDEGPGPSEQPSAPMEMGQEQAGPQ |
| JGI12635J15846_108827821 | 3300001593 | Forest Soil | MKSRFSAGFAILALAFSGALSLCALAQTTEEGPGPSEQPSAPMEMGQQG |
| JGIcombinedJ26739_1012553672 | 3300002245 | Forest Soil | MKNRLLKIFAVLILALAGAFSIGAMAQTTDEGPGPSEQPSAPMEMGQEQAG |
| C688J35102_1177718461 | 3300002568 | Soil | MKNRLAGKFAILILALSGALSIGAFAQTTEEGPGPSEQPSAPME |
| JGI25617J43924_102941181 | 3300002914 | Grasslands Soil | MKNRFISSFAIVTLALAGVFSTGLLAQTTEEGSGPSEQPSAPMEMGQGEPAPPSP |
| Ga0062384_1004911871 | 3300004082 | Bog Forest Soil | MRNRLIAGFAILTLALAGGLSLSAYAQTTEEGPGPSEQPSAPMEMGQPQSAPPSQPGQ |
| Ga0062384_1008655801 | 3300004082 | Bog Forest Soil | MKNRLISGLAVLVLALTGALSTRVLAQTTEEGPGPSEQPSAPME |
| Ga0062387_1003540902 | 3300004091 | Bog Forest Soil | MKNRLISSFAVLVLAIAGALSTRLLAQTTEEGPGPSEQPSAPMELGQGQSAPPAQPPQLN |
| Ga0062389_1008003963 | 3300004092 | Bog Forest Soil | MRTKFISTLAILTLALAGALSLTLQAQTTQEGPGPSEQPSAPMEIGQDRSPQPAR |
| Ga0062389_1009260923 | 3300004092 | Bog Forest Soil | MKTKFITAFAILVLLLAGALSLTLQAQTTQEGPGPSEQPSAPMEIGQDRSPQPAR |
| Ga0062389_1033012541 | 3300004092 | Bog Forest Soil | MKSRLTASLAVLTLALAGAWSVGAFAQTTEEGPGPSEQPSAPLE |
| Ga0070733_102019312 | 3300005541 | Surface Soil | MKTKLIAILVFLTLGVLSIALQAQTTEEGTGPSEQPSAPMEMGQPQ |
| Ga0066691_102179071 | 3300005586 | Soil | MKTRLTSRFAILALALSGAMSIGALAQTTEEGPGPSEQPSAPMEIGQGQEQGPDS |
| Ga0070762_103621891 | 3300005602 | Soil | MKNRFIGSLAILTLAGAGVFTASLQAQTTDEGSGPSEQ |
| Ga0070764_103854661 | 3300005712 | Soil | MKSRVSANFGILALAFSGALSLGAWAQTTEEGPGPS |
| Ga0070717_111290352 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MKNRFIANLAILTLAVAGAFSIGMQGQTTEEGPGPSEQPSAPMEIGQP |
| Ga0075029_1012873072 | 3300006052 | Watersheds | MKNRFIASSVILTLAFAGVLSLSAFAQTADDGPGPSEQPSAPME |
| Ga0075030_1000134276 | 3300006162 | Watersheds | MKNRFIASSVILPLAFAGILSLSAFAQTADDGPGPSEQPSAPMEIGQDQQQGQPSDQGPYSQPSDAQPSDAQ |
| Ga0075030_1005595741 | 3300006162 | Watersheds | MKNRFLAGFAVLTFALTGALSMSALAQTTEEGPGPSE |
| Ga0075030_1011474811 | 3300006162 | Watersheds | MKSRFIATLAVLTLALSGALSIGALAQTTEEGTGPTEQPSAPMEIGQNQG |
| Ga0066659_113199171 | 3300006797 | Soil | MKTRLTSRFAILALALSGAMSIGALAQTTEEGPGPSEQAS |
| Ga0073928_105936272 | 3300006893 | Iron-Sulfur Acid Spring | MKNRFIGSLAILTLALAGVFTASVQAQTTDEGSGPSEQPSAPME |
| Ga0099792_101983541 | 3300009143 | Vadose Zone Soil | MKNMFISRFAILTLVLVGAYSGSLLAQTTEEGPGPSEQPSAPMEMGQ |
| Ga0116121_12039611 | 3300009644 | Peatland | MKYRLISRSAILALALAGAFTIQVLAQTTDEGSGPSEQPSAPMEIG |
| Ga0126380_114544402 | 3300010043 | Tropical Forest Soil | MKDRLAGKFAITILALSGLLSIGAWAQTTEEGPGPTEQPSA |
| Ga0074044_102976611 | 3300010343 | Bog Forest Soil | MKNELISNFAILTVALASAFSLSAQAQTTEEGQGPSEQPSAPME |
| Ga0126378_103208563 | 3300010361 | Tropical Forest Soil | MKYGLVAKSAIVVLALSIALSIGAVAQTTEPGPGPSEQPNAPMEIGQAQGPEAQTPPS |
| Ga0136449_1024775902 | 3300010379 | Peatlands Soil | MKNRFIARLAILTVALAGALSISAQAQTTEEGPGPSEQPSAPMEMGQGQSAPPSQPGQPP |
| Ga0137392_104660613 | 3300011269 | Vadose Zone Soil | MKRRFIASLAVLALALAGVFSLSALAQTTEEGPGPS |
| Ga0137389_103024034 | 3300012096 | Vadose Zone Soil | MKNRFIVNLAILTLAVAGTFSIVMQGQTTEEGPGPSEQPSAPMEIGQPQA |
| Ga0137377_112724872 | 3300012211 | Vadose Zone Soil | MKTRLTSRFAILALALSGAMSIGALAQTTEEGPGPSEQPSAPMEIGQGQEQGPDSQPY |
| Ga0137366_102322783 | 3300012354 | Vadose Zone Soil | MKNKFFASFVVLVLALSGALSINTFAQTTEEGPGPSDQPSAPMEIGQSGP |
| Ga0137361_112939222 | 3300012362 | Vadose Zone Soil | MKSRFIASLAVLVLTLGSAFNIAVQAQTTEEGPGPSEQPS |
| Ga0137398_107414182 | 3300012683 | Vadose Zone Soil | MKNKFISSFAILTLALAGALSTALQAQTTEEGPGPSEQPSAPMEMGQG |
| Ga0137419_116904271 | 3300012925 | Vadose Zone Soil | MKNRVITGLAVLAFAVATAFSIGARAQTTEEGPGPSEQPSAPMEIGQPQAEQSPQY |
| Ga0182024_113444832 | 3300014501 | Permafrost | MRWIVREKFIAGFAVLTLALAVAVSVNLQAQTTQEGTGPSEQPSAP |
| Ga0181525_102609011 | 3300014654 | Bog | MKNRLIASSAILSLVLVGALSVSVQAQTTEEGAGPSEQPTAPM |
| Ga0181522_102131703 | 3300014657 | Bog | MWDGVAKRWAMKNRLIASSAILSLVLVGALSVSVQAQTTEEGAGPSEQPT |
| Ga0187818_103614201 | 3300017823 | Freshwater Sediment | MKSRFAGKWAVLTLAISGALSIGAWAQTTDEGPGP |
| Ga0187856_10218571 | 3300017925 | Peatland | MKNKFIGSLAVLTLVLAGVLTVSVRAQTTEEGNGPSEQPSAPMEMGQPQSVPP |
| Ga0187819_102430203 | 3300017943 | Freshwater Sediment | MKSRILTAFAILTLAVAGAFSIGAMAQTTEEGTGPSEQPSAPMEVGQQQPS |
| Ga0187819_102473231 | 3300017943 | Freshwater Sediment | MKNGLFTVFAILTLAVAGAFSISAVAQTTEEGTGPSEQPSAPMEVGQQ |
| Ga0187779_106470772 | 3300017959 | Tropical Peatland | MKNLFINKLAVLVLVAAGMFSVVAFAQTTEEGPGPSEQPSAPMEVGQGQPSDSQPMD |
| Ga0187783_108716521 | 3300017970 | Tropical Peatland | MKNRFLSSLAILTLALAGVFTISAFAQTTDEGTGPTEQPSAPMEVGQPQP |
| Ga0187781_103164401 | 3300017972 | Tropical Peatland | MKNRFLSSLAILTLALAGVFTISAFAQTTDEGTGPTEQPSAPMEVGQP |
| Ga0187816_100644431 | 3300017995 | Freshwater Sediment | MKSRFAGKWAVLTLAISGALSLGAWAQTTDEGPGPSE |
| Ga0187816_101397681 | 3300017995 | Freshwater Sediment | MKSRLMASLAVLTLALAGAFSISALAQTTEEGPGPSEQPSAPMEIGQDQN |
| Ga0187889_103704412 | 3300018023 | Peatland | MKNKFVGTFAILILAVAGVLTVSVKAQTTEEGSGPSEQPSAPMEIGQPQSAPPP |
| Ga0187855_104639991 | 3300018038 | Peatland | MKNALIRSLAILALAFAGALALWAQTPTTEPGNGPSEQPGAPMEMGQPQ |
| Ga0066662_115840631 | 3300018468 | Grasslands Soil | MKSRFIASLAVLVLTLGSAFNIAVQAQTTEEGPGPSEQPSAPLETGTDAEA |
| Ga0066669_112092621 | 3300018482 | Grasslands Soil | MKSKFIASLAVLVLAVGGAFNIAVRAQTTEEGPGPSEQPSAPMETGVDTEAPLPED |
| Ga0182025_10930091 | 3300019786 | Permafrost | MKNRFVGSLAILALALAGAFTASVQAQTTDEGSGPSEQPSAPMEMGQPHAP |
| Ga0193726_12108041 | 3300020021 | Soil | MKNRFLANFAVLTLAVGGALSRSAVAQTTQEGPGA |
| Ga0210403_107924492 | 3300020580 | Soil | MKSRLLASFAVLTLAFSTMLSVSAFAQTTEEGPGPSEQPSAPMEIGQGQDQSG |
| Ga0210399_103144102 | 3300020581 | Soil | MKNRFMASMTVLTLALAGAFSVAVQAQTTEEGPGPSEQP |
| Ga0210400_109859581 | 3300021170 | Soil | MKNRFSASLAILTLALATAFTVSMQAQTTDEGPGPSEQPSAPMEIGQPQSAP |
| Ga0210388_100452085 | 3300021181 | Soil | MKNKLIAGLVVFTLGLAGVLTVSVKAQTTEEGSGPSEQPSAPM |
| Ga0210388_106588102 | 3300021181 | Soil | MKDRFIASLTILILAVAGVFTASVQAQTTDEGSGP |
| Ga0210383_105145582 | 3300021407 | Soil | MKNRFVASLTVLTLALAVAFSISAQAQTTQEGPGPSEQPSAPMEIGQGQPAQPPQ |
| Ga0210384_114809021 | 3300021432 | Soil | MENRFIGSLAVLTLAFAGALSISVQAQTTEEGPGPSEQPSA |
| Ga0210391_102721811 | 3300021433 | Soil | VIILELPVVRSRFIPSLLVWTLALAGFFTVRAQAQTTDEGNGPSEQPSAP |
| Ga0210391_115242101 | 3300021433 | Soil | MKNRFISSFAILTLAVTGALSSSLQAQTTQEGPGPSDQPSAPMEMG |
| Ga0210390_112095122 | 3300021474 | Soil | MKDRFIASLTILILAVAGVFTASVQAQTTDEGSGPSEQPSAPMEM |
| Ga0187846_101918482 | 3300021476 | Biofilm | MKDNLAGKFAILVLAVSGALSIGAFAQTTEEGPGPSEQP |
| Ga0210402_113882451 | 3300021478 | Soil | MKSKLIASFAFLTLALAAALLISAQAQTTEEGPGPSEQPSAPM |
| Ga0210410_109592461 | 3300021479 | Soil | MKNRFLASLAILTLAGALTSLQAQTTEAGPGPSEQPSAPMEVGQGQSTPPAQADP |
| Ga0210410_116380061 | 3300021479 | Soil | MKNRFIGSLAILTLAGAGVFTASLQAQTTDEGSGPSEQP |
| Ga0210409_100767096 | 3300021559 | Soil | MKSRFIASLAVISLASLAMSVGAMAQTTEEGPGPSEQP |
| Ga0213851_10117721 | 3300021860 | Watersheds | MKSRIFTGIAILTLAVAGAFSISAVAQTTEEGTGPSEQPSAPMEVG |
| Ga0228598_10287592 | 3300024227 | Rhizosphere | MKNRFIASFAVLTLALAGALTISVQAQTTEEGPGPSEQPSAPMEM |
| Ga0209171_100114191 | 3300025320 | Iron-Sulfur Acid Spring | MKSEFTAGFAVLTLTLAGVLSISAQAQTTEEGPGPSEQPSAPMEMGQIKP |
| Ga0208035_10029541 | 3300025406 | Peatland | MKSKFLASFTALMLALASALTIHAQTTQEGAGPSEQPSAPMEIGQDKS |
| Ga0208194_10023914 | 3300025412 | Peatland | MKNKFVGTFAILILAVAGVLTVSVKAQTTEEGSGPSEQPSAPMEIG |
| Ga0208935_10612962 | 3300025414 | Peatland | MKNKIIGSLAVLTLALVGVLSVNVQAQTTEEGKGPSEQPSAPMEIGQPQSAP |
| Ga0208193_10848462 | 3300025463 | Peatland | MRSRFIPSLLVWTLALAGFFTVRAQAQTTDEGNGPSEQPSAPMEMG |
| Ga0179587_110087352 | 3300026557 | Vadose Zone Soil | MKSKFIPSLAVVTLALTSAFSMSALAQTADDGSGPSEQPSAPMEM |
| Ga0179587_110516261 | 3300026557 | Vadose Zone Soil | MKSRFIASLAVLTLAPATIFTMGVQAQTTEEGPGPSEQPNAPFEIGQPGNDQSAIDQ |
| Ga0208237_10268711 | 3300027080 | Forest Soil | MKIRCIQSSVILTLALAGVLTVAVQAQTTDEGTGPTEQPSAPMEIGQPQSGPPAQ |
| Ga0209655_100670051 | 3300027767 | Bog Forest Soil | MKNRFIASLAILTLALAGVLAVSVQAQTTEEGQGPSEQPSAPMEI |
| Ga0209655_101503521 | 3300027767 | Bog Forest Soil | MRNRLIAGFAILTLALAGGLSLSAYAQTTEEGPGPSEQPSAPM |
| Ga0209169_100105477 | 3300027879 | Soil | MKNRLTASSAILSLVLVGALSLSVQAQTTQEGAGPSEQPS |
| Ga0209169_101682231 | 3300027879 | Soil | MKSRVSANFGILALAFSGALSLGAWAQTTEEGPGPSEQP |
| Ga0209275_100501151 | 3300027884 | Soil | MRSRFIPSLLVWTLALAGFFTVSAQAQTTDEGNGPS |
| Ga0209624_104441211 | 3300027895 | Forest Soil | MKIRFIASSVIFTLALAGAFSTSAQAQTTQEGPGPSEQP |
| Ga0209067_104343612 | 3300027898 | Watersheds | MKSRFIANLVILTLALAGLLSLSAFAQTTEEGPGPSEQPSAPMEIGQQQPSDQGPDAASS |
| Ga0209488_102426221 | 3300027903 | Vadose Zone Soil | MKNKFISSFAILTLALAGALSTALQAQTTEEGPGPSEQPSAPMEMGQGESA |
| Ga0209488_103915351 | 3300027903 | Vadose Zone Soil | MKNMFISRFAILTLVLAGAYSGSLLAQTTEEGPGPSEQPSA |
| Ga0209415_106886182 | 3300027905 | Peatlands Soil | MKKNRFIGSFAVLTLALSGAFSISALAQTTDEGTGPSEQPSAP |
| Ga0265349_10088461 | 3300028037 | Soil | MKNGLIGRLAVLTLALAGVCAVSVQAQTTDEGSGPSEQPSAPMEMGQQQ |
| Ga0302147_103157152 | 3300028566 | Bog | MKSKFIASFAVLTLALAGALSISVRAQTTQEGAGPSEQPS |
| Ga0265338_101775921 | 3300028800 | Rhizosphere | MKSRLMASLAVLTLALSGAWSISALAQTTEEGPGPSEQPSAPMEIGQ |
| Ga0265338_103707823 | 3300028800 | Rhizosphere | MKSRLMASLAVLTLALSGALSINALAQTTEEGPGPSEQPSAPMEIGQDQNGPQG |
| Ga0302228_100374791 | 3300028808 | Palsa | MKSKFIASFAVLTLALAGALSISVRAQTTQEGAGPSEQPSAPMEIGQEK |
| Ga0302278_102666632 | 3300028866 | Bog | MKNRFISSFAVLTLALAGTLSAQTPTTEPGQGPSEQPSAPMEMGQPQAAP |
| Ga0302282_11637802 | 3300030045 | Fen | MKSKFIASFAVLTLALAGALSISVRAQTTQEGAGPS |
| Ga0302182_104105621 | 3300030054 | Palsa | MKSKFIASFAVLTLALAGALSISMQAQTTQEGTGSSEQPSAPMEIGQVK |
| Ga0302325_123281961 | 3300031234 | Palsa | VRGKFIPGSAVLALALAVAVSVNLQAQTTQEGTGPSDQPSAPMEIGQD |
| Ga0302320_114955621 | 3300031524 | Bog | MKSKFLVSFAVLTLALASALTIHAQTTQEGTGPSEQ |
| Ga0302326_118079273 | 3300031525 | Palsa | MKNKFIGSLAVIALALTGVFTVSVKAQTTDEGSGPTEQPSAPME |
| Ga0302326_121389472 | 3300031525 | Palsa | MKSKFIGSLAVIALALAGVFTVSVRAQTTDEGTGPSEQPSAPM |
| Ga0307477_109076791 | 3300031753 | Hardwood Forest Soil | MKDRFIASLTVLTLALAVAFSISAQAQTTQEGLGPSEQPSAPMEMG |
| Ga0307475_100578091 | 3300031754 | Hardwood Forest Soil | MKIRFIASLAVLTLVVAGAFSISALAQTTEEGPGPSEQPSAPMEMGQPDSAPPPQLDQPYQSGDQTY |
| Ga0307473_111369302 | 3300031820 | Hardwood Forest Soil | MKNRLTNRFAILALALSGALSIGAFAQTTEEGPGPSEQPSAPME |
| Ga0307478_108634791 | 3300031823 | Hardwood Forest Soil | MKSRLIGSLAVLALAFSGALSVSGLAQTTEEGPGPSEQPSAPMEMGQGQAG |
| Ga0306922_114199862 | 3300032001 | Soil | MRDTLAGKFAILILAVSGLLSIGAWTQTTEDGPGPTEQPS |
| Ga0307470_119384641 | 3300032174 | Hardwood Forest Soil | MKNSFLSSFAILTLALAGTMSTSLHAQTTEEGPGPSEQPSAPMEMGQGEMVPPPP |
| Ga0307471_1018353801 | 3300032180 | Hardwood Forest Soil | MKTRLTSRFAILALALSGAMSIGAFAQTTEEGPGPSEQPSAPMEIGQAQEQGP |
| Ga0334790_175349_473_628 | 3300033887 | Soil | MKSRFMASLAVLTLALSGAWSISAVAQTTEEGPGPSEQPSAPMEIGQGQIGQ |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |