Metagenome / Metatranscriptome Family F090085

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090085
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	120 residues
Representative Sequence	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Number of Associated Samples	92
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	31.48 %
% of genes from short scaffolds (< 2000 bps)	65.74 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.259 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (29.630 % of family members)
Environment Ontology (ENVO)	Unclassified (81.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.91% β-sheet: 8.94% Coil/Unstructured: 34.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02563	Poly_export	27.78
PF02706	Wzz	12.96
PF13807	GNVR	8.33
PF04932	Wzy_C	5.56
PF13614	AAA_31	2.78
PF04542	Sigma70_r2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	27.78
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	12.96
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	12.96
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	12.96
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	12.96
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	5.56
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.26 %
Unclassified	root	N/A	40.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.26 %
Unclassified	root	N/A	40.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.26 %
Unclassified	root	N/A	40.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	25.93 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	25.93 %
Verrucomicrobia bacterium TMED44	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	25.93 %
Verrucomicrobia bacterium TMED44	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	11.11 %
Verrucomicrobia bacterium TMED44	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10111820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1100	Open in IMG/M
3300000116\|DelMOSpr2010_c10020705	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300001344\|JGI20152J14361_10006364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	5858	Open in IMG/M
3300001347\|JGI20156J14371_10021301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3483	Open in IMG/M
3300001348\|JGI20154J14316_10019580	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300001349\|JGI20160J14292_10021943	All Organisms → cellular organisms → Bacteria	3570	Open in IMG/M
3300001349\|JGI20160J14292_10075888	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300001351\|JGI20153J14318_10006430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7123	Open in IMG/M
3300001352\|JGI20157J14317_10058710	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300001353\|JGI20159J14440_10094470	Not Available	962	Open in IMG/M
3300001354\|JGI20155J14468_10119550	Not Available	890	Open in IMG/M
3300001940\|GOS2222_1004284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1840	Open in IMG/M
3300001952\|GOS2224_1045003	All Organisms → cellular organisms → Bacteria	3529	Open in IMG/M
3300004097\|Ga0055584_101398635	Not Available	727	Open in IMG/M
3300005239\|Ga0073579_1095336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	12509	Open in IMG/M
3300005747\|Ga0076924_1079136	Not Available	584	Open in IMG/M
3300005931\|Ga0075119_1013725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2642	Open in IMG/M
3300005933\|Ga0075118_10163192	Not Available	741	Open in IMG/M
3300006029\|Ga0075466_1012731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2844	Open in IMG/M
3300006803\|Ga0075467_10451350	Not Available	664	Open in IMG/M
3300006874\|Ga0075475_10258375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	729	Open in IMG/M
3300009071\|Ga0115566_10211845	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300009074\|Ga0115549_1042825	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300009076\|Ga0115550_1050363	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300009077\|Ga0115552_1427625	Not Available	521	Open in IMG/M
3300009172\|Ga0114995_10765550	Not Available	529	Open in IMG/M
3300009173\|Ga0114996_10313318	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300009193\|Ga0115551_1027522	All Organisms → cellular organisms → Bacteria	2923	Open in IMG/M
3300009193\|Ga0115551_1309835	Not Available	689	Open in IMG/M
3300009409\|Ga0114993_10028838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4541	Open in IMG/M
3300009420\|Ga0114994_10735971	Not Available	642	Open in IMG/M
3300009420\|Ga0114994_11092060	Not Available	515	Open in IMG/M
3300009422\|Ga0114998_10273365	Not Available	794	Open in IMG/M
3300009422\|Ga0114998_10333972	Not Available	709	Open in IMG/M
3300009422\|Ga0114998_10478056	Not Available	583	Open in IMG/M
3300009422\|Ga0114998_10591477	Not Available	522	Open in IMG/M
3300009425\|Ga0114997_10365086	Not Available	786	Open in IMG/M
3300009426\|Ga0115547_1012425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3634	Open in IMG/M
3300009432\|Ga0115005_10403916	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300009434\|Ga0115562_1130818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	955	Open in IMG/M
3300009437\|Ga0115556_1015409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3853	Open in IMG/M
3300009440\|Ga0115561_1023948	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300009441\|Ga0115007_10191657	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300009443\|Ga0115557_1045399	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300009445\|Ga0115553_1029379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2698	Open in IMG/M
3300009447\|Ga0115560_1008479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5607	Open in IMG/M
3300009476\|Ga0115555_1040726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44	2144	Open in IMG/M
3300009496\|Ga0115570_10021987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3773	Open in IMG/M
3300009497\|Ga0115569_10054744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2183	Open in IMG/M
3300009498\|Ga0115568_10030330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2999	Open in IMG/M
3300009512\|Ga0115003_10727676	Not Available	577	Open in IMG/M
3300009526\|Ga0115004_10605554	Not Available	649	Open in IMG/M
3300009544\|Ga0115006_10993935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	744	Open in IMG/M
3300009705\|Ga0115000_10650732	Not Available	653	Open in IMG/M
3300009705\|Ga0115000_10819995	Not Available	571	Open in IMG/M
3300009706\|Ga0115002_10274433	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300009785\|Ga0115001_10498689	Not Available	752	Open in IMG/M
3300009785\|Ga0115001_10903216	Not Available	530	Open in IMG/M
3300009785\|Ga0115001_10935763	Not Available	520	Open in IMG/M
3300010883\|Ga0133547_11555545	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012524\|Ga0129331_1334202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	848	Open in IMG/M
3300017697\|Ga0180120_10364159	Not Available	571	Open in IMG/M
3300020185\|Ga0206131_10394540	Not Available	580	Open in IMG/M
3300021347\|Ga0213862_10100296	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300021371\|Ga0213863_10050544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2158	Open in IMG/M
3300025425\|Ga0208646_1006838	All Organisms → cellular organisms → Bacteria	3610	Open in IMG/M
3300025438\|Ga0208770_1006101	All Organisms → cellular organisms → Bacteria	4266	Open in IMG/M
3300025508\|Ga0208148_1035736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1308	Open in IMG/M
3300025570\|Ga0208660_1014143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2507	Open in IMG/M
3300025603\|Ga0208414_1150882	Not Available	580	Open in IMG/M
3300025620\|Ga0209405_1053170	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300025632\|Ga0209194_1017230	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300025640\|Ga0209198_1028841	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300025641\|Ga0209833_1150603	Not Available	611	Open in IMG/M
3300025680\|Ga0209306_1198159	Not Available	549	Open in IMG/M
3300025690\|Ga0209505_1002666	All Organisms → cellular organisms → Bacteria	10847	Open in IMG/M
3300025694\|Ga0209406_1078688	Not Available	1157	Open in IMG/M
3300025699\|Ga0209715_1060062	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300025712\|Ga0209305_1020357	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300025803\|Ga0208425_1011911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2399	Open in IMG/M
3300025809\|Ga0209199_1165668	Not Available	807	Open in IMG/M
3300025810\|Ga0208543_1080950	Not Available	783	Open in IMG/M
3300025822\|Ga0209714_1159149	Not Available	568	Open in IMG/M
3300025830\|Ga0209832_1023323	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300025869\|Ga0209308_10087590	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300025869\|Ga0209308_10336226	Not Available	620	Open in IMG/M
3300025880\|Ga0209534_10020036	All Organisms → cellular organisms → Bacteria	4915	Open in IMG/M
3300025880\|Ga0209534_10465253	Not Available	529	Open in IMG/M
3300025881\|Ga0209309_10323264	Not Available	688	Open in IMG/M
3300025886\|Ga0209632_10032258	All Organisms → cellular organisms → Bacteria	3576	Open in IMG/M
3300025892\|Ga0209630_10026911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3772	Open in IMG/M
3300025892\|Ga0209630_10442582	Not Available	551	Open in IMG/M
3300027687\|Ga0209710_1016978	All Organisms → cellular organisms → Bacteria	3912	Open in IMG/M
3300027779\|Ga0209709_10229208	Not Available	840	Open in IMG/M
3300027791\|Ga0209830_10341083	Not Available	654	Open in IMG/M
3300027801\|Ga0209091_10109832	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300027813\|Ga0209090_10103766	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300027838\|Ga0209089_10278506	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300031519\|Ga0307488_10135784	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300031519\|Ga0307488_10439983	Not Available	795	Open in IMG/M
3300031519\|Ga0307488_10648120	Not Available	605	Open in IMG/M
3300031519\|Ga0307488_10667247	Not Available	593	Open in IMG/M
3300031569\|Ga0307489_10681307	Not Available	716	Open in IMG/M
3300031597\|Ga0302116_1154862	Not Available	708	Open in IMG/M
3300031621\|Ga0302114_10106086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1286	Open in IMG/M
3300031621\|Ga0302114_10243187	Not Available	732	Open in IMG/M
3300031622\|Ga0302126_10029439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2431	Open in IMG/M
3300031659\|Ga0307986_10274998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.37%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.63%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	30.56%
Pelagic	Environmental → Aquatic → Marine → Pelagic	30.56%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	15.74%
Coastal	Environmental → Aquatic → Marine → Coastal	14.81%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	30.56%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	30.56%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	15.74%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	29.63%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	29.63%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	13.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.41%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	4.63%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	2.78%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.85%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.85%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001940	Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006	Environmental	Open in IMG/M
3300001952	Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005931	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9	Environmental	Open in IMG/M
3300005933	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300025425	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)	Environmental	Open in IMG/M
3300025438	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025570	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025603	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025822	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101118202	3300000101	Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
DelMOSpr2010_100207054	3300000116	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20152J14361_100063643	3300001344	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTIDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVXNPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20156J14371_100213013	3300001347	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISXTXWLFILKSYNEYKXINIEDIAREIAPSSRISKPSLRLILENAKIKKFIXFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20154J14316_100195802	3300001348	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20160J14292_100219432	3300001349	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLICMTVWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20160J14292_100758882	3300001349	Pelagic Marine	MDKQLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWVIEPEDITINEFKKWTQIFL*
JGI20153J14318_100064303	3300001351	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20157J14317_100587101	3300001352	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSW
JGI20159J14440_100944702	3300001353	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
JGI20155J14468_101195502	3300001354	Pelagic Marine	MDKLLDPHTKKICDAXLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKNINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
GOS2222_10042843	3300001940	Marine	FMDKLLDPHTKKICDALLFDIVRSADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVHNPKDNRSWVIEPEDITINEFKKWTQIFL*
GOS2224_10450034	3300001952	Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWTIEPEDITINEFKKWTQIFL*
Ga0055584_1013986352	3300004097	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKIINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0073579_10953367	3300005239	Marine	MDKLLDPHTKKICDALLFDIVRIADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWVIEPEDITINEFKKWTQIFL*
Ga0076924_10791361	3300005747	Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0075119_10137252	3300005931	Saline Lake	MDKLLDPHSKKICDALLYDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVENPKDNRSWIIEPEDITINKFKKWTQIFL*
Ga0075118_101631921	3300005933	Saline Lake	MDKLLDPHSKKICDALLYDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0075466_10127311	3300006029	Aqueous	PHTKKICDALLFDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0075467_104513502	3300006803	Aqueous	MDKLLDPHTKKICDALLFDIVRAADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0075475_102583751	3300006874	Aqueous	PHTKKICDVLLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115566_102118451	3300009071	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLICMTVWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0115549_10428252	3300009074	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115550_10503632	3300009076	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFK
Ga0115552_14276251	3300009077	Pelagic Marine	MDKLLDPHTKKICDALLFDIIRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0114995_107655501	3300009172	Marine	MDRLLDPHTQKICDALLSDIINTVDNEETCTIKFFRRDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRS
Ga0114996_103133181	3300009173	Marine	MDRLLDPHTQKICDTLLSDILNTVDNEEKCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115551_10275223	3300009193	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIALSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSKFFL*
Ga0115551_13098351	3300009193	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0114993_100288383	3300009409	Marine	MDKLLDPHAKKICDALLYDIIKRTDNGEESTIKFFRKDLISMTIWLFILKSYNEYKSINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0114994_107359711	3300009420	Marine	MDKLLDPHTKKICDALLYDIVKRTDNGEENTIKFFRKDLISMTVWLFILKSYNEYKSINIEDIAREIAASSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0114994_110920601	3300009420	Marine	MDKLLDPHTKKICDALLADIVRIADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPED
Ga0114998_102733651	3300009422	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0114998_103339721	3300009422	Marine	MDKLLDPHTQKICDTLLLDIINTVDNGETCTIKFFRKDLVTMTIWLFILKSYNECRAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0114998_104780562	3300009422	Marine	MDRLLDPHTQKICDTLLSDILNTVDNEEKCTIKFFRKDLVTMTVWLFILKSYNEYKAINIEDIAREVAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITIN
Ga0114998_105914771	3300009422	Marine	MDRLLDPHTQKICDALLSDIMNTVDNEEKCTIKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREVAPSSRISKPSLRLILENAKIKKFIRFVDNPKDN
Ga0114997_103650861	3300009425	Marine	MDKLLDPHTKKICDALLSDIVRIADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115547_10124252	3300009426	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTIDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115005_104039161	3300009432	Marine	MDRLLDPHAQKICDALLSDIINTVNNEETCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115562_11308182	3300009434	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115556_10154092	3300009437	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISMTVWLFILKSYNEYKIINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0115561_10239483	3300009440	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115007_101916572	3300009441	Marine	MDRLLDPHTQKICDALLSDIINTVDNEETCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115557_10453991	3300009443	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPE
Ga0115553_10293792	3300009445	Pelagic Marine	MDKLLDPHTKKICDALLFDIIRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0115560_10084794	3300009447	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115555_10407262	3300009476	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0115570_100219872	3300009496	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115569_100547443	3300009497	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115568_100303303	3300009498	Pelagic Marine	MDKQLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWIIEPEDITINEFKKWSQIFL*
Ga0115003_107276761	3300009512	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITIN
Ga0115004_106055541	3300009526	Marine	MDKLLDPHTQKICDTLLLDIINTVDNGETCTIKFFRKDLVTMTIWLFILKSYNECRAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEP
Ga0115006_109939351	3300009544	Marine	KLLDPHTQKICDALLSDIINTVDNEETCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115000_106507321	3300009705	Marine	MDKLLDPHTQKICDTLLLDIINTVDNGETCTIKFFRKDLVTMTIWLFILKSYNECRAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPED
Ga0115000_108199951	3300009705	Marine	MDKLLDLHSKKICDSLLFDIIRSADNGEETTVKFFRKDLPTMTIWLFIIKSYNEYRSINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPNDNRSWIIEP*
Ga0115002_102744331	3300009706	Marine	LLDAHTKKICDALLYDIIKTTDNGEESTIKFFRKDLISMTIWLFILKSYNEYKSINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0115001_104986891	3300009785	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDKPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115001_109032161	3300009785	Marine	MDRLLDPHTQKICDTLLLDIINTVDNGETCTIKFFRKDLVTMTIWLFILKSYNECRAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL*
Ga0115001_109357631	3300009785	Marine	MDKLLDPHTQKICDALLSDIVRTADNGEESTIKFFRKDLITMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0133547_115555452	3300010883	Marine	MDKLLDLHSKKICDSLLFDIIRSADNGEETTVKFFRKDLPTMTIWLFIIKSYNEYRSINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPNDNRSWIIEPEDITINEFKKWTQIFL*
Ga0129331_13342021	3300012524	Aqueous	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITIDEFKKWTQIFL*
Ga0180120_103641591	3300017697	Freshwater To Marine Saline Gradient	MDKLLDPHTKKICDALLSDIVRAADNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEF
Ga0206131_103945401	3300020185	Seawater	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0213862_101002962	3300021347	Seawater	LLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0213863_100505442	3300021371	Seawater	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0208646_10068384	3300025425	Saline Lake	MDKLLDPHTKKICDVLLYDIVKRADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0208770_10061014	3300025438	Saline Lake	MDKLLDPHSKKICDALLYDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVENPKDNRSWIIEPEDITINKFKKWTQIFL
Ga0208148_10357362	3300025508	Aqueous	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0208660_10141432	3300025570	Aqueous	MDKLLDPHTKKICDALLFDIVRTIDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0208414_11508821	3300025603	Saline Lake	MDKLLDPHSKKICDALLYDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209405_10531702	3300025620	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIASSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDI
Ga0209194_10172302	3300025632	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209198_10288412	3300025640	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209833_11506031	3300025641	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209306_11981591	3300025680	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209505_10026668	3300025690	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209406_10786881	3300025694	Pelagic Marine	MDKQLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWIIEPEDITINEFKKILDLLENLSS
Ga0209715_10600622	3300025699	Pelagic Marine	FDIIRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKIINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209305_10203572	3300025712	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITVWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0208425_10119112	3300025803	Aqueous	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRVSKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209199_11656681	3300025809	Pelagic Marine	MDKLLDPHTKKICDALLFDIIRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0208543_10809501	3300025810	Aqueous	MDKLLDPHTKKICDALLSDIVRKADNGEESTVKFFRKDLISMTIWLFILKSYNEYKKINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209714_11591491	3300025822	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209832_10233232	3300025830	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISITVWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209308_100875901	3300025869	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLICMTVWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209308_103362262	3300025869	Pelagic Marine	MDKQLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWVIEPEDITINEFKKWTQIFL
Ga0209534_100200364	3300025880	Pelagic Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209534_104652531	3300025880	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLISMTVWLFILKSYNEYKIINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITI
Ga0209309_103232641	3300025881	Pelagic Marine	LDPHTKKICDVLLSDIVRTADNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVNNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209632_100322583	3300025886	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTTDNGEESTVKFFRKDLICMTVWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209630_100269112	3300025892	Pelagic Marine	MDKLLDPHTKKICDALLFDIVRTADNGEESTVKFFRKDLISITIWLFILKSYNEYKTINIEDIARELAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0209630_104425822	3300025892	Pelagic Marine	LLFDIVRTIDNGEESTVKFFRKDLISTTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVANPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209710_10169783	3300027687	Marine	MDKLLDPHTQKICDALLSDIVNTVDNEETCTIKFFRKDLITMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209709_102292082	3300027779	Marine	MDKLLDPHTKKICDALLSDIVRIADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209830_103410831	3300027791	Marine	MDRLLDPHTQKICDTLLLDIINTVDNGETCTIKFFRKDLVTMTIWLFILKSYNECRAINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209091_101098322	3300027801	Marine	MDRLLDPHTQKICDALLSDIINTVDNEETCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINE
Ga0209090_101037661	3300027813	Marine	MDKLLDPHTQKICDALLSDIMNTADNEETCTIKFFRKDLITMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0209089_102785061	3300027838	Marine	MDRLLDPHTQKICDALLSDIMNTADNEETCTIKFFRKDLITMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0307488_101357841	3300031519	Sackhole Brine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFK
Ga0307488_104399832	3300031519	Sackhole Brine	MDKLLDPHTKKICDALLNDIIKRTEDGEESTIKFFRKDLITTTIWLFILKSYNDYKSINIEDIAREIALSCRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWT
Ga0307488_106481201	3300031519	Sackhole Brine	MDKLLDPHTKKICDALLFDIIRTADNGEESTIKFFRKDLISMTIWLFILKSYNEYKSINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFK
Ga0307488_106672471	3300031519	Sackhole Brine	MDKLLDPHTKKICDALLYDIVKRTDNGEENTIKFFRKDLISMTVWLFILKSYNEYKSINIEDIAREIAASSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0307489_106813072	3300031569	Sackhole Brine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKNFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0302116_11548622	3300031597	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWSQIFL
Ga0302114_101060861	3300031621	Marine	MDKLLDPHTQKICDALLSDIMNTADNEETCTIKFFRKDLITMTIWLFILKSYNEYKAINIEDIAREVAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQ
Ga0302114_102431871	3300031621	Marine	MDKLLDPHTKKICDALLSDIVRTADNGEESTVKFFRKDLISMTIWLFILKSYNEYKTINIEDIAREIAPSSRISKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQ
Ga0302126_100294393	3300031622	Marine	LSDIINTVDNEETCTIKFFRKDLVTMTIWLFILKSYNEYKAINIEDIAREVAPSSRVSKPSLRLILENAKIKKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL
Ga0307986_102749981	3300031659	Marine	CDVLLYDIVKRADNGEESTVKFFRKDLISMTIWLFILKSYNEYKAINIEDIAREIAPSSRISKPSLRLILENAKIRKFIRFVDNPKDNRSWIIEPEDITINEFKKWTQIFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences