Metagenome / Metatranscriptome Family F090079

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090079
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	53 residues
Representative Sequence	MSDFSADFKDRATRQRQPTKLECGLLGALCATIVLGVLFWVGIQFSILQLIIQIR
Number of Associated Samples	73
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.37 %
% of genes near scaffold ends (potentially truncated)	37.04 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.963 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.815 % of family members)
Environment Ontology (ENVO)	Unclassified (51.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.22% β-sheet: 0.00% Coil/Unstructured: 45.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13356	Arm-DNA-bind_3	2.78
PF13436	Gly-zipper_OmpA	2.78
PF12833	HTH_18	1.85
PF04115	Ureidogly_lyase	1.85
PF06897	DUF1269	0.93
PF14525	AraC_binding_2	0.93
PF00873	ACR_tran	0.93
PF02586	SRAP	0.93
PF00682	HMGL-like	0.93
PF01979	Amidohydro_1	0.93
PF00211	Guanylate_cyc	0.93
PF10672	Methyltrans_SAM	0.93
PF02690	Na_Pi_cotrans	0.93
PF00903	Glyoxalase	0.93
PF02515	CoA_transf_3	0.93
PF16188	Peptidase_M24_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	1.85
COG1283	Na+/phosphate symporter	Inorganic ion transport and metabolism [P]	0.93
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.93
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
All Organisms	root	All Organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
cellular organisms	root	All Organisms → cellular organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.41 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.85 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.93 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.93 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.85 %
unclassified Siccirubricoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → unclassified Siccirubricoccus	0.93 %
Methylobacterium longum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium longum	0.93 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.93 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.93 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.85 %
Siccirubricoccus sp. G192	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → unclassified Siccirubricoccus → Siccirubricoccus sp. G192	0.93 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.93 %
Methylobacterium longum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium longum	0.93 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.93 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BWJHE	Not Available	529	Open in IMG/M
3300003218\|JGI26339J46600_10030950	Not Available	1506	Open in IMG/M
3300004080\|Ga0062385_10299555	Not Available	921	Open in IMG/M
3300004152\|Ga0062386_100597043	Not Available	902	Open in IMG/M
3300004633\|Ga0066395_10806896	Not Available	563	Open in IMG/M
3300004635\|Ga0062388_100267700	Not Available	1403	Open in IMG/M
3300005332\|Ga0066388_101272916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300005332\|Ga0066388_106207480	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_107381012	Not Available	552	Open in IMG/M
3300005764\|Ga0066903_102867080	Not Available	935	Open in IMG/M
3300006804\|Ga0079221_10265170	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300010048\|Ga0126373_11778601	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300010359\|Ga0126376_10394711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1244	Open in IMG/M
3300010359\|Ga0126376_12441646	Not Available	570	Open in IMG/M
3300010360\|Ga0126372_10226363	Not Available	1582	Open in IMG/M
3300010360\|Ga0126372_13076694	Not Available	518	Open in IMG/M
3300010361\|Ga0126378_10256994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300010361\|Ga0126378_11212810	Not Available	852	Open in IMG/M
3300010376\|Ga0126381_103719874	Not Available	597	Open in IMG/M
3300010376\|Ga0126381_104132856	Not Available	564	Open in IMG/M
3300010376\|Ga0126381_104485575	Not Available	539	Open in IMG/M
3300010376\|Ga0126381_105100978	Not Available	503	Open in IMG/M
3300010398\|Ga0126383_12483264	Not Available	603	Open in IMG/M
3300016270\|Ga0182036_10139013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1713	Open in IMG/M
3300016319\|Ga0182033_10771792	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300016319\|Ga0182033_11636411	Not Available	583	Open in IMG/M
3300016341\|Ga0182035_10407233	Not Available	1144	Open in IMG/M
3300016357\|Ga0182032_10031455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3245	Open in IMG/M
3300016357\|Ga0182032_11054918	Not Available	696	Open in IMG/M
3300016387\|Ga0182040_10024956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium longum	3395	Open in IMG/M
3300016387\|Ga0182040_10355346	Not Available	1137	Open in IMG/M
3300016387\|Ga0182040_10425550	Not Available	1047	Open in IMG/M
3300016387\|Ga0182040_10471435	Not Available	998	Open in IMG/M
3300016404\|Ga0182037_10834140	Not Available	796	Open in IMG/M
3300016422\|Ga0182039_10169926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1710	Open in IMG/M
3300018089\|Ga0187774_11226212	Not Available	539	Open in IMG/M
3300020579\|Ga0210407_10443452	Not Available	1015	Open in IMG/M
3300020580\|Ga0210403_10201941	Not Available	1631	Open in IMG/M
3300020580\|Ga0210403_10397169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M
3300020580\|Ga0210403_10868614	Not Available	713	Open in IMG/M
3300021171\|Ga0210405_11048778	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300021178\|Ga0210408_10547945	Not Available	918	Open in IMG/M
3300021358\|Ga0213873_10011825	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300021361\|Ga0213872_10271617	Not Available	710	Open in IMG/M
3300021405\|Ga0210387_10880660	Not Available	788	Open in IMG/M
3300021444\|Ga0213878_10021552	Not Available	2375	Open in IMG/M
3300021444\|Ga0213878_10058073	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300021476\|Ga0187846_10000923	All Organisms → cellular organisms → Bacteria → Proteobacteria	16816	Open in IMG/M
3300021476\|Ga0187846_10039930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2098	Open in IMG/M
3300021476\|Ga0187846_10144984	Not Available	1007	Open in IMG/M
3300021476\|Ga0187846_10284412	Not Available	685	Open in IMG/M
3300021560\|Ga0126371_10052360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3911	Open in IMG/M
3300021560\|Ga0126371_10797772	Not Available	1090	Open in IMG/M
3300021560\|Ga0126371_11530024	Not Available	795	Open in IMG/M
3300021560\|Ga0126371_11951611	Not Available	705	Open in IMG/M
3300027698\|Ga0209446_1009817	All Organisms → cellular organisms → Bacteria → Proteobacteria	2348	Open in IMG/M
3300027698\|Ga0209446_1059493	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300030776\|Ga0075396_1775291	Not Available	587	Open in IMG/M
3300030776\|Ga0075396_1948029	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300031057\|Ga0170834_101248498	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300031446\|Ga0170820_11655758	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300031474\|Ga0170818_101652562	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300031474\|Ga0170818_102520281	Not Available	575	Open in IMG/M
3300031543\|Ga0318516_10021145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3325	Open in IMG/M
3300031545\|Ga0318541_10050510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	2133	Open in IMG/M
3300031545\|Ga0318541_10273402	Not Available	940	Open in IMG/M
3300031545\|Ga0318541_10826168	Not Available	517	Open in IMG/M
3300031546\|Ga0318538_10126113	Not Available	1340	Open in IMG/M
3300031549\|Ga0318571_10466472	Not Available	503	Open in IMG/M
3300031561\|Ga0318528_10481766	Not Available	666	Open in IMG/M
3300031561\|Ga0318528_10489826	Not Available	660	Open in IMG/M
3300031573\|Ga0310915_10134062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1702	Open in IMG/M
3300031640\|Ga0318555_10350297	Not Available	800	Open in IMG/M
3300031719\|Ga0306917_10401201	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300031719\|Ga0306917_11058492	Not Available	632	Open in IMG/M
3300031753\|Ga0307477_10004986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9557	Open in IMG/M
3300031763\|Ga0318537_10270733	Not Available	629	Open in IMG/M
3300031771\|Ga0318546_10911834	Not Available	619	Open in IMG/M
3300031796\|Ga0318576_10096046	Not Available	1348	Open in IMG/M
3300031797\|Ga0318550_10003189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	5557	Open in IMG/M
3300031797\|Ga0318550_10151590	Not Available	1114	Open in IMG/M
3300031798\|Ga0318523_10421016	Not Available	663	Open in IMG/M
3300031805\|Ga0318497_10469030	Not Available	705	Open in IMG/M
3300031845\|Ga0318511_10171113	Not Available	956	Open in IMG/M
3300031879\|Ga0306919_10384520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1075	Open in IMG/M
3300031890\|Ga0306925_10007169	All Organisms → cellular organisms → Bacteria → Proteobacteria	10449	Open in IMG/M
3300031890\|Ga0306925_10057046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4083	Open in IMG/M
3300031890\|Ga0306925_10069608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3701	Open in IMG/M
3300031893\|Ga0318536_10513483	Not Available	602	Open in IMG/M
3300031896\|Ga0318551_10180551	Not Available	1162	Open in IMG/M
3300031910\|Ga0306923_11864492	Not Available	615	Open in IMG/M
3300031912\|Ga0306921_12325474	Not Available	561	Open in IMG/M
3300031942\|Ga0310916_10239749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300031942\|Ga0310916_11643535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → unclassified Siccirubricoccus → Siccirubricoccus sp. G192	521	Open in IMG/M
3300031945\|Ga0310913_10177733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	1481	Open in IMG/M
3300031945\|Ga0310913_10455256	Not Available	909	Open in IMG/M
3300031945\|Ga0310913_10574256	Not Available	800	Open in IMG/M
3300031946\|Ga0310910_10645574	Not Available	838	Open in IMG/M
3300031947\|Ga0310909_10063766	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300031954\|Ga0306926_11167217	Not Available	907	Open in IMG/M
3300031959\|Ga0318530_10220474	Not Available	780	Open in IMG/M
3300032001\|Ga0306922_11578225	Not Available	654	Open in IMG/M
3300032042\|Ga0318545_10072360	Not Available	1187	Open in IMG/M
3300032052\|Ga0318506_10540453	Not Available	516	Open in IMG/M
3300032060\|Ga0318505_10480450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300032068\|Ga0318553_10185415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1084	Open in IMG/M
3300032091\|Ga0318577_10204248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	945	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.59%
Aquatic	Environmental → Aquatic	5.56%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Freshwater	Environmental → Aquatic → Freshwater	5.56%
Cave	Environmental → Terrestrial → Cave	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	4.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	3.70%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_5709800	2040502001	Soil	RVMSDFSADFKERATQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
JGI26339J46600_100309501	3300003218	Bog Forest Soil	MSDFSADFKDQANPERKPTKLECGLLGALCATIVLAVLFWLGIQFSLLQLMIQTN*
Ga0062385_102995552	3300004080	Bog Forest Soil	MADFSPDLTDRTTRQREPTKLECGLLGALSATVVLGTLFWLGIQFSFLKLIIQIS*
Ga0062386_1005970432	3300004152	Bog Forest Soil	MSDFSADLKDGATRQRELTKLEYGLLGALFATIVLGFLFWLGIEFSFLNLIVQIS*
Ga0066395_108068961	3300004633	Tropical Forest Soil	MSEFSADFKDRATQQRQPTKLECGLLGALCATVILGVLFWVGIQFSILQLIIQIR*
Ga0062388_1002677002	3300004635	Bog Forest Soil	MSDVSADFKDQAKPQRQPTKLECGLLGALCATIVLAVLFWLGFQFSLLQLMAQIH*
Ga0066388_1012729161	3300005332	Tropical Forest Soil	MSDFSADFKDQAKPQRVPTRLECGLLGALCATIVLALLFWLGIQFSLLQLMTQIR*
Ga0066388_1062074801	3300005332	Tropical Forest Soil	MSDFPVGLKESAVKHREPTKLECAMLGALSATIVLGVLFWLGVQFSFLKVIAEIS*
Ga0066388_1073810121	3300005332	Tropical Forest Soil	VSDFPVELKNEAMQQREPTKLECGLLGALGASIVLGILFWLGVQFSFLKVIVDIS*
Ga0066903_1028670801	3300005764	Tropical Forest Soil	MPDLSADFKDSATRQREPTKLECGLLGALASTIVLALLFWLSIQLSLL
Ga0079221_102651701	3300006804	Agricultural Soil	MPNFSADFKDAATRQREPTKLECGLLGALSATIVLGVLFWLGIQFSLLKLMIQIS*
Ga0126373_117786011	3300010048	Tropical Forest Soil	MMPDLSADFKDSATRQREPTKLECGLLGALAATIALAILFWLSIQLSLLQLVVHVR*
Ga0126376_103947111	3300010359	Tropical Forest Soil	MSDFSADFKDRATRQRQPTKLECGLLGALCATVILGVLFWVGIQFSILQLIIQIR*
Ga0126376_124416461	3300010359	Tropical Forest Soil	MSDFPVDLKENAVQQREPTKLECAMLGALVAAIVLGVLFWLGVQFSFLKVIAEIS*
Ga0126372_102263631	3300010360	Tropical Forest Soil	MPDFSADLKDEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFFKLIIQIS*
Ga0126372_130766942	3300010360	Tropical Forest Soil	MMPDLSADFKDSATRQREPTKLECGLLGALAATIALAILFWLSIQLSL
Ga0126378_102569942	3300010361	Tropical Forest Soil	MPDLSADLNDEAPRQRVPTKLECGLFGALSATIVLSFLFWLGIEFSFLKLIIQLS*
Ga0126378_112128101	3300010361	Tropical Forest Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIFLSFLFWLGIQFSFLKLLVQIS*
Ga0126381_1037198741	3300010376	Tropical Forest Soil	MSEFSADFKDRATQQRQPTKLECGLLGALCATVILGVFFWVGIQFSILQLIIQIR*
Ga0126381_1041328562	3300010376	Tropical Forest Soil	MSDLSADFKDRATQQRQPTKLECGLIGALCATMILGVLFWIGIQFSVLQLIIQIR*
Ga0126381_1044855751	3300010376	Tropical Forest Soil	MSDFSADFKERATQQRQPTKLECGLLGALCATIVLGVLFWIGVQFSILQLIVQIR*
Ga0126381_1051009781	3300010376	Tropical Forest Soil	FKERATRQRQPTKLECGLLGALCATIILGVLFWVGVQFSILQLIVQIR*
Ga0126383_124832641	3300010398	Tropical Forest Soil	MSEFSADFKDRATQQRQPTKLECGLLGALCATVILGVLFWVGIQFSI
Ga0182036_101390134	3300016270	Soil	MPDLSADFKDAATRQREPTKLECGLLGALTATIVLAILFWLSIQLSLLQLAIQVR
Ga0182033_107717922	3300016319	Soil	MSDFSADFKDRATRQRQPTKLECGLLGALCATIVLGVLFWVGIQFSILQLIIQIR
Ga0182033_116364111	3300016319	Soil	FSADFKDRVTQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0182035_104072331	3300016341	Soil	MPDLSADLNDEASRQRVPTKLECGLFGALSATIVLSFLFWLGIEFSFLKLIIQLS
Ga0182032_100314551	3300016357	Soil	DIKDEAPPQREPTKLECGLLGALIATILLSFLFWLGIQFSFLKLMLQIS
Ga0182032_110549181	3300016357	Soil	VVSDFSADFKDRATQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0182040_100249561	3300016387	Soil	MPDLSADLNAETPRQRVPTKLECGLFGALSATIVLSFLFWLGIEFSFLKLVIQLS
Ga0182040_103553461	3300016387	Soil	PADFKDQARQQREPTKLECGMLGALCATVVLTVLFWLGFQFSILQLMVQIR
Ga0182040_104255503	3300016387	Soil	MSDFSADLKDEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFFKLIIQIS
Ga0182040_104714351	3300016387	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIFLSFLFWLGIQFSFLKLMLQIS
Ga0182037_108341401	3300016404	Soil	DEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFLKLIIQIS
Ga0182039_101699261	3300016422	Soil	MPDLSADLNDEASRQRVPTKLECGLFGALSATIVLSFLFWLGIEF
Ga0187774_112262121	3300018089	Tropical Peatland	MSDFSADFKDRATQQRQATKLECGLLGALCATIILGVLFWIGVQFSLLQLVIQLH
Ga0210407_104434521	3300020579	Soil	MFMSDFSADFKDRATRQRQPTKLECGLLGALCATIILGVLFWVGVQFSILQLIVQIR
Ga0210403_102019411	3300020580	Soil	DFMNRCASSTGDREERVMSDFSADFKDRATQQRQPTKLECGLLGGLCATIILGVLFWIGIQFSILQLVIQIR
Ga0210403_103971692	3300020580	Soil	MSDFSADFKDRATRIRQPTKLECGLLGALCATIILGVLFWIGIQFSILQLIIQIR
Ga0210403_108686142	3300020580	Soil	MSDFSADFKERATQQRLPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0210405_110487782	3300021171	Soil	KDRATRIRQPTKLECGLLGALCATIILGVLFWIGIQFSILQLIIQIR
Ga0210408_105479452	3300021178	Soil	MFMSDFSADFKDRATRQRQPIKLECGLLGALCATIILGVLFWVGVQFSILQLIVQIR
Ga0213873_100118253	3300021358	Rhizosphere	MSDLPAVLKEGATRQREPTKLECGMLGALCATIVLGVLFWLGIQFSLVSFLVRVG
Ga0213872_102716171	3300021361	Rhizosphere	MPDVSADLKDSATRQREPTKLECGLFGALSATIVLGVLFWLSIQFSFLKLIIQIS
Ga0210387_108806601	3300021405	Soil	MSDFSADFKDRATQQRQPTKLECGLLGGLCATIILGVLFWIGIQFSILQLVIQIR
Ga0213878_100215523	3300021444	Bulk Soil	MPDVSADLKDSATRQREPTKLECGLFGALSATIVLGVLFWLGIQFSFLKLIIQIS
Ga0213878_100580732	3300021444	Bulk Soil	MSDLPAVLKEGATRQREPTKLECGMLGALCATIVLGVLFWLSIQFSLVSLLVQVG
Ga0187846_100009238	3300021476	Biofilm	MPDFAADLKDKASQQREPTKLECGLFGALSATIVLGILFWLGIQFSFLKLIVQIS
Ga0187846_100399303	3300021476	Biofilm	MSDFSADFKDQAKPQRVPTRLECGLLGALCATIVLALLFWLGIQFSLLQLMIQIR
Ga0187846_101449842	3300021476	Biofilm	MSDVSTDFKDQPKPQREPTKLECGLLGALCATIVLAVLFWMLFQFSVLQFMIQIR
Ga0187846_102844121	3300021476	Biofilm	MPDFSADLKDTATQQREPTKLECGLLGALSATIVLAFLFWLSIQFSFLKLIILTS
Ga0126371_100523605	3300021560	Tropical Forest Soil	MPDLSADFKDSATRQREPTKLECGLLGALAATIALAILFWLSIQLSLLQLVVHVR
Ga0126371_107977721	3300021560	Tropical Forest Soil	MPDFSADLKDEAPRQREPTKLECGLIGALTATIFLSFLFWLGIQFSFLKLLVQIS
Ga0126371_115300242	3300021560	Tropical Forest Soil	FKDRATQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0126371_119516111	3300021560	Tropical Forest Soil	MPDLSADFKDSATRQREPTKLECGLLGALASTIVLALLFW
Ga0209446_10098172	3300027698	Bog Forest Soil	MSDFSADFKDQANPERKPTKLECGLLGALCATIVLAVLFWLGIQFSLLQLMIQTN
Ga0209446_10594932	3300027698	Bog Forest Soil	MADFSPDLTDRTTRQREPTKLECGLLGALSATVVLGTLFWLGIQFSFLKLIIQIS
Ga0075396_17752911	3300030776	Soil	EERVMSDFSADFKERATQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0075396_19480292	3300030776	Soil	MSDFSADFKDRATQQRQPTKLECGLLGALCATIILGVLFWIGIQFSILQLVIQIR
Ga0170834_1012484982	3300031057	Forest Soil	ADFKDRATQQRQPTKLECGLLGALCATIILGVLFWVGIQFSILQLVIQIR
Ga0170820_116557581	3300031446	Forest Soil	MSDFSADFKDRATQQRQPTKLECGLLGALCATIILGVLFWVGIQFSILQLVIQIR
Ga0170818_1016525621	3300031474	Forest Soil	LAPQAIREERVMSDFSADFKDRATQQRQPTKLECGLLGALCATIILGVLFWVGIQFSILQLVIQIR
Ga0170818_1025202811	3300031474	Forest Soil	MSDFSADFKDRATRQRQPTKLECGLLGALCATIILGVLFWVGVQFSILQLIVQIR
Ga0318516_100211451	3300031543	Soil	MSDFSADFKDQAKPQRVPTRLECGLLGALCATIVLALLFWLGIQFSLLQLMTQIR
Ga0318534_108821161	3300031544	Soil	MPDLSADFKDAATRQREPTKLECGLLGALAATIVLAILFWLSIQLSLLQLAIQVR
Ga0318541_100505101	3300031545	Soil	MPDFSADLKDTATQQREPTKLECGLLGALSATIVLAFLFWLSIQFSFLKLIILSS
Ga0318541_102734021	3300031545	Soil	MSDFSADLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKLIIQIS
Ga0318541_108261681	3300031545	Soil	MPDFSADLKDEAPPQREPTKLECGLLGALIATILLSFLFWLGIQFSFLKLMLQ
Ga0318538_101261134	3300031546	Soil	MPDFSADLKDEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFFKLIIQIS
Ga0318571_104664722	3300031549	Soil	SDFSADFKDQAKPQRVPTRLECGLLGALCATIVLALLFWLGIQFSLLQLMTQIR
Ga0318528_104817661	3300031561	Soil	MSDVSTDFKDQPKPQREPTKLECGLLGALCATIILAVLFWMLFQFSVLQFMIQIR
Ga0318528_104898261	3300031561	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLGIQFSVLKLIFQIS
Ga0310915_101340622	3300031573	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLRLMFQIS
Ga0318555_103502972	3300031640	Soil	MPDLSADFKDSATRQREPTKLECGLLGALAATIVLSLLFW
Ga0306917_104012011	3300031719	Soil	KDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLKLMFQISS
Ga0306917_110584921	3300031719	Soil	MSDFSADLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKL
Ga0307477_100049866	3300031753	Hardwood Forest Soil	MPNFSADFKDAATRQREPTKLECGLLGALSATIVLGVLFWLGIQFSLLKLMIQIS
Ga0318537_102707331	3300031763	Soil	MPDLSADFKDSATRHREPTKLECGLLGALAATTVLALLFW
Ga0318546_109118342	3300031771	Soil	MPDLSADFKDSATRQREPTKLECGLLGALAATIVLALLFWLSIQLSL
Ga0318576_100960462	3300031796	Soil	MPDFSVDLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKLIIQIS
Ga0318550_100031892	3300031797	Soil	MSDFSADFKDQAKPQRVPTRLECGLLVALCATIVLALLFWLGIQFSLLQLMTQIR
Ga0318550_101515901	3300031797	Soil	MPDFSADLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKLIIQIS
Ga0318523_104210163	3300031798	Soil	KDEAPPQREPTKLECGLLGALTATIFLSFLFWLGIQFSFLKLMLQIS
Ga0318497_104690302	3300031805	Soil	MPDFSADFKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLKLMFQIS
Ga0318511_101711131	3300031845	Soil	MPDFSADLKDEAPPQREPTKLECGLLGALTATIFLSFLFWLGIQFSVLKLIFQIS
Ga0306919_103845201	3300031879	Soil	MPDLSADLNDEASRQRVPTKLECGLFGALSATIVLSFLFWLGIEFSFLKLVIQLS
Ga0306925_100071697	3300031890	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLKLMFQIS
Ga0306925_100570462	3300031890	Soil	MSEFSADFKDRATQQRQPTKLECGLLGALCATVILGVLFWVGIQFSILQLIIQIR
Ga0306925_100696082	3300031890	Soil	MPDFSADLKDEAPPQREPTKLECGLLGALTATIFLSFLFWLGIQFSFLKLMLQIS
Ga0318536_105134831	3300031893	Soil	MPDLSADFKDSATRQREPTKLECGLLGALAATIVLALLF
Ga0318551_101805514	3300031896	Soil	MPDFSADLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKL
Ga0306923_118644921	3300031910	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLKLMFQISS
Ga0306921_123254741	3300031912	Soil	MPDFSADLKDEAPPQREPTKLECGLLGALIATILLSFLFWLGIQFSFLKLMLQIS
Ga0310916_102397491	3300031942	Soil	MPDLSADFKDAATRQREPTKLECGLLGALAATIVLAILFWLCIQLS
Ga0310916_116435351	3300031942	Soil	MSDFSVDFKDRATQQRQPTKLECGLLGALCATIILGVLFWLGIQFSFLQLITQIR
Ga0310913_101777331	3300031945	Soil	AMPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLKLMFQISS
Ga0310913_104552561	3300031945	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLSIQFSVLR
Ga0310913_105742561	3300031945	Soil	MPDFSADLKDEAPRQREPTKLECGLLGALTATIVLSFLFWLGIQFSVLK
Ga0310910_106455741	3300031946	Soil	KRGIMSDFSADLKDEATRQRQPTKLECGLFGALSAAIVLGILFWLGIQFSFLKLIIQIS
Ga0310909_100637663	3300031947	Soil	MPDLSADLNDEAPRQRVPTKLECGLFGALSATIVLSFLFWLGIEFSFLKLVIQLS
Ga0306926_111672172	3300031954	Soil	MSDFSADFKDRAIQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0318530_102204741	3300031959	Soil	DFSADLKDEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFFKLIIQIS
Ga0306922_115782251	3300032001	Soil	DFSADFKDRATQQRQPTKLECGLLGALCATIVLGVLFWVAVQFSVLQLIVQIR
Ga0318545_100723601	3300032042	Soil	MSDFSADLKDEATRQRQPTKLECGLFGALSATIVLGILFWLGIQFSFLKLIIQIS
Ga0318506_105404532	3300032052	Soil	MPDFSADLKDTATQQREPTKLECGLLGALSATIVLAFLFWLSIQFSFLK
Ga0318505_104804501	3300032060	Soil	MSDVSTDFKDQPKPQREPTKLECGLLGALCATIILAVLFWMLFQFSVLQFMIQI
Ga0318553_101854154	3300032068	Soil	MPDLSADFKDAATRQREPTKLECGLLGALAATIVLALLFWLSIQLSLLELAVHV
Ga0318577_102042481	3300032091	Soil	MPDLSADFKDSATRQREPTKLECGLLGALAATIVLALLFWLSIQLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090079

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences