Metagenome / Metatranscriptome Family F090053

Overview

Basic Information

• Family ID: F090053
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 108
• Average Sequence Length: 40 residues
• Representative Sequence: MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
• Number of Associated Samples: 88
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 75.70 %
• % of genes near scaffold ends (potentially truncated): 22.22 %
• % of genes from short scaffolds (< 2000 bps): 89.81 %
• Associated GOLD sequencing projects: 84
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (96.296 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.704 % of family members)
• Environment Ontology (ENVO): Unclassified (34.259 % of family members)
• Earth Microbiome Project Ontology (EMPO): Unclassified (47.222 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 50.00%
  β-sheet: 0.00%
  Coil/Unstructured: 50.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13193	AMP-binding_C	45.37
PF00378	ECH_1	45.37
PF16113	ECH_2	3.70
PF01476	LysM	0.93
PF02979	NHase_alpha	0.93
PF06267	DUF1028	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.22 %
Unclassified	root	N/A	2.78 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.22 %
Unclassified	root	N/A	2.78 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %
Unclassified	root	N/A	2.78 %

Level 4

Name	Rank	Taxonomy	Distribution
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.93 %
Unclassified	root	N/A	2.78 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.93 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 7

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.93 %
Unclassified	root	N/A	2.78 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
unclassified Micromonosporaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae	21.30 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 12

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.93 %
Unclassified	root	N/A	2.78 %

Level 13

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.93 %
Unclassified	root	N/A	2.78 %

Level 14

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 15

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.93 %
Unclassified	root	N/A	2.78 %

Level 16

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.93 %
Unclassified	root	N/A	2.78 %

Level 17

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Level 18

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300004629|Ga0008092_11299573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	542
3300005179|Ga0066684_10534133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	787
3300005439|Ga0070711_101447946	All Organisms → cellular organisms → Bacteria	598
3300005471|Ga0070698_100875596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	843
3300005566|Ga0066693_10118481	All Organisms → cellular organisms → Bacteria	971
3300005764|Ga0066903_101848717	All Organisms → cellular organisms → Bacteria	1155
3300005983|Ga0081540_1045307	All Organisms → cellular organisms → Bacteria	2236
3300006806|Ga0079220_11089055	All Organisms → cellular organisms → Bacteria	645
3300009093|Ga0105240_11593481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	683
3300009792|Ga0126374_10174932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1330

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.74%
Host-Associated	Host-Associated	9.26%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	9.26%
Terrestrial	Environmental → Terrestrial	90.74%

Category

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Soil	Environmental → Terrestrial → Soil	89.81%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.78%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.15%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	18.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.63%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008092_112995732	3300004629	Tropical Rainforest Soil	MVEAHSSKSEYRHLIASIKLLTAAAPLGFAYVAALGIAT*
Ga0066684_105341332	3300005179	Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0070711_1014479462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVEARIFKSKYRHIIASVKLLTAAAPLGLAYVAALGIVT*
Ga0070698_1008755961	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT*
Ga0066693_101184812	3300005566	Soil	MMAEAHISRSKYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0066903_1018487172	3300005764	Tropical Forest Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIAA*
Ga0081540_10453073	3300005983	Tabebuia Heterophylla Rhizosphere	MMAEAHISKPRYRHVIAPVKLLTAAAPPGFAYVAARGTTT*
Ga0079220_110890551	3300006806	Agricultural Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0105240_115934811	3300009093	Corn Rhizosphere	EAHISKSKYRYVIASIKLLTAAAPLGFAYVAALGITT*
Ga0126374_101749322	3300009792	Tropical Forest Soil	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126380_105424682	3300010043	Tropical Forest Soil	MAGARISRSGYRHVIASIKLLTAAAPPGFAYVAALGIAT*
Ga0126380_117399531	3300010043	Tropical Forest Soil	NQVLTGMMVQARISTSGYRHVIASVKLLTAAAPPGFAYAAALGIAT*
Ga0126384_101052262	3300010046	Tropical Forest Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT*
Ga0126373_126703382	3300010048	Tropical Forest Soil	MMVEAHISKFKYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0134109_104972062	3300010320	Grasslands Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0126378_123848192	3300010361	Tropical Forest Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126377_102515472	3300010362	Tropical Forest Soil	MMAGAHISKSGYRHVIASVKLLTAAAPLGFAYVAALGIAT*
Ga0126379_102344362	3300010366	Tropical Forest Soil	MVEAHISKSKYRHVIASIKLLTAATLGSASVAAPGIAT*
Ga0126379_112997881	3300010366	Tropical Forest Soil	MAEAHISKSRYRHVIASIKLLTAAAPLGFAYVAARGTAT*
Ga0126383_101773302	3300010398	Tropical Forest Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAARGIAT*
Ga0137364_104162662	3300012198	Vadose Zone Soil	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIVT*
Ga0157320_10059281	3300012481	Arabidopsis Rhizosphere	MVEARVSKSKYRHVIASIKLLTAAAPPGSGYVAAHGIAR*
Ga0164301_106312802	3300012960	Soil	MVEAHISKSKYRHVISSIKLLTAAAPLGFAYVAALGITT*
Ga0126369_110203401	3300012971	Tropical Forest Soil	PRNQVLIGMMVEAHIAKPRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126369_118328772	3300012971	Tropical Forest Soil	MMIEAHISKSKYRHVIASIKLLTAAAPLGSASVAAPG
Ga0164307_102857452	3300012987	Soil	MVEAHISKSKYRHVISSIKLLTAAAPLGFAYVAALGIAT*
Ga0163163_103252632	3300014325	Switchgrass Rhizosphere	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAI*
Ga0182008_104995601	3300014497	Rhizosphere	RNQVLIGMMVEAHIYKSRYRHVIASIKLLTAAAPLGFAYVAARGMAT*
Ga0182005_11952062	3300015265	Rhizosphere	VEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIVT*
Ga0132256_1018274702	3300015372	Arabidopsis Rhizosphere	MIGMMVEAHISKSTYRHVIASSRLLTAAAPPGSGYVAAHGIAR*
Ga0132255_1004286913	3300015374	Arabidopsis Rhizosphere	MIGMMVDAHISKSTYRHVIASSRLLTAAAPPGSGYVAAHGIAR*
Ga0182033_108436082	3300016319	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYMAALGIAT
Ga0182034_115871862	3300016371	Soil	MMVEVRISKSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0182037_105325462	3300016404	Soil	IVEAHISKSRYRHVIASIKLLAAAAPLGFAYVAARGIAT
Ga0182039_119978322	3300016422	Soil	VQAHISKSRYRHIIASIKLLTAAAPLGFARVAARGIAT
Ga0187786_104242802	3300017944	Tropical Peatland	MMAGAHISKPRYRHVIASIKLLTAAAPLGFAYVAARGIAA
Ga0187779_100375843	3300017959	Tropical Peatland	MMVEAHISKPKYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0187766_100464443	3300018058	Tropical Peatland	MAGAHISKPRYRHVIASIKLLTAAAPLGFAYVAALGIAR
Ga0187765_102666402	3300018060	Tropical Peatland	MMVAAHISKSRYRHVIASITLLTAAAPLGFAYVAAHGIAT
Ga0187773_103851062	3300018064	Tropical Peatland	MMVEAHISKSKYRHLIASVKLLTAAAPLGFAYVADLGIAT
Ga0066667_103910071	3300018433	Grasslands Soil	LIGMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT
Ga0066669_103589322	3300018482	Grasslands Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGSAYVAALGIAT
Ga0210399_105613611	3300020581	Soil	QVLIGMMVEAHISKSKYRHVIASIKLLTAVAPLGSAYVAALGIAT
Ga0210395_108509121	3300020582	Soil	QLLIGMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGTAT
Ga0213881_100862562	3300021374	Exposed Rock	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0182009_100213422	3300021445	Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAYAAARGIAT
Ga0126371_118745582	3300021560	Tropical Forest Soil	MMVEAHISKFKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0126371_130526112	3300021560	Tropical Forest Soil	MMVEAHISKPRYRHVIASIKLLRAAAPPGFAYVAVLGIAT
Ga0207663_116363892	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMVEARIFKSKYRHIIASVKLLTAAAPLGLAYVAALGIVT
Ga0207674_104708692	3300026116	Corn Rhizosphere	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAAFGIAI
Ga0209461_100853872	3300027750	Agave	MMVEAHIAKSKYRHVIASIKLLTAAAPLGFAYAAARGIAT
Ga0209073_101892672	3300027765	Agricultural Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0307308_102148032	3300028884	Soil	VKAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0318516_103393572	3300031543	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318516_106037372	3300031543	Soil	MVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318534_104286852	3300031544	Soil	MVEVHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318538_103859382	3300031546	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318515_103458292	3300031572	Soil	MMVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318515_103603062	3300031572	Soil	MMAEAHICKSKFRHVIASIKLLTAAAPLGFAYAAVGIAT
Ga0310915_100801683	3300031573	Soil	MMVEAHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318555_102430692	3300031640	Soil	MMVEVHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318555_102518082	3300031640	Soil	MAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318574_109228472	3300031680	Soil	HICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318572_109676312	3300031681	Soil	MMAGAHISRPRYRHLIASIKLLRAAAPLGFADVAARGIAT
Ga0307474_115929891	3300031718	Hardwood Forest Soil	MMVEPHISKSKYRHVIASITLLTAAAPLGSAHVAAPGIAT
Ga0306917_104637202	3300031719	Soil	MAEAHICRSRYRHVIASIKLLRAAAPLGFADVAARGIAT
Ga0306917_115268611	3300031719	Soil	DRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318493_104736782	3300031723	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALRIAT
Ga0318493_106307212	3300031723	Soil	AHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318493_107507552	3300031723	Soil	MMIKAHISRSTYRHVIASITLLTAAAPLGSASVAALGIAT
Ga0306918_104504302	3300031744	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYAAVGIAT
Ga0318502_105277612	3300031747	Soil	MMVEVRISKSRYRHVIASIKLLTAAAPLGFAYVAARGIAI
Ga0318535_101184352	3300031764	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318554_105273001	3300031765	Soil	MAGAHISRPRYRHLIASIKLLRAAAPLGFADVAARGIAT
Ga0318576_102860291	3300031796	Soil	IGMMVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318499_101155692	3300031832	Soil	MMVEAHISKSKYRHVIASIRRLTAAAPLGFAYVAARGIAT
Ga0318511_104587672	3300031845	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVG
Ga0318512_103474911	3300031846	Soil	KMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0308174_101355482	3300031939	Soil	MMAEAHISKSRYRHVIASIKLLTAAAPLGFAYVAARGIAT
Ga0310910_112341242	3300031946	Soil	MMVEARISKSKYRHVIASIKLLTAAAPLGFAYMAALGIAT
Ga0310910_114344582	3300031946	Soil	MVEAHISKSKYRHVIASIKLLTAAAPHGFAYVAALGMAT
Ga0318531_103203251	3300031981	Soil	MVEAHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318570_100914931	3300032054	Soil	TSQPGFDRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318570_101679711	3300032054	Soil	MMVQAHISKSRYRHIIASIKLLTAAAPLGFARVAARGIAT
Ga0318505_104322951	3300032060	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318505_105612241	3300032060	Soil	VQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318524_102026242	3300032067	Soil	SQPGFDRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0306924_110196051	3300032076	Soil	VEAHISKPRYRHVIASIKLLRAAAPPGFAYVAVLGIAT
Ga0335085_100369952	3300032770	Soil	MVGAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335085_100383932	3300032770	Soil	MGMMAAAHISKSGYRHVSASIKLLTAAAPLGFAYVAAPGIAT
Ga0335085_125565372	3300032770	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGSASVTAPGIAT
Ga0335082_104060642	3300032782	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPPGSAYLAALGIAT
Ga0335079_105566152	3300032783	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAAPGIAT
Ga0335079_119371522	3300032783	Soil	MMAEAHISKPRYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0335078_1000889613	3300032805	Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0335078_111899502	3300032805	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIGT
Ga0335078_122811272	3300032805	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGVAYVTALGIAT
Ga0335070_103605742	3300032829	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGSAYVAAFGVAT
Ga0335069_104013802	3300032893	Soil	MMVEAHVSTSKYRHGIVSIKPLTAATPLGSAYAAARGIAT
Ga0335069_105975742	3300032893	Soil	MVAAHIPQYRYRHVIASIKLLTAAAPLGFAYVAARGIAT
Ga0335069_109418732	3300032893	Soil	MAEARISKSRYRHLIASIKLLTAAPPGFAYAAALGIAA
Ga0335071_104557672	3300032897	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGFAYVAARGSAT
Ga0335072_107101642	3300032898	Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAHVAARGIVI
Ga0335083_103179542	3300032954	Soil	MMVGAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335076_102960352	3300032955	Soil	MMVEERISKSKYRHVIAPIKLLTAPAPPGVAYVAALGIAA
Ga0335084_105457242	3300033004	Soil	MVEAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335073_108064152	3300033134	Soil	MGMMAAAHISKSGYRHVSASIKLLTAAAPLGFAYVAVPGIAT
Ga0335077_108968952	3300033158	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIAT