Metagenome / Metatranscriptome Family F090040

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	128 residues
Representative Sequence	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLAATLQ
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.73 %
% of genes near scaffold ends (potentially truncated)	42.59 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (55.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.815 % of family members)
Environment Ontology (ENVO)	Unclassified (35.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.98% β-sheet: 33.13% Coil/Unstructured: 58.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF09586	YfhO	17.59
PF03060	NMO	1.85
PF13231	PMT_2	1.85
PF00106	adh_short	0.93
PF00535	Glycos_transf_2	0.93
PF00072	Response_reg	0.93
PF09099	Qn_am_d_aIII	0.93
PF12627	PolyA_pol_RNAbd	0.93
PF13489	Methyltransf_23	0.93
PF13450	NAD_binding_8	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	1.85
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.48 %
Unclassified	root	N/A	43.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.48 %
Unclassified	root	N/A	43.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.56 %
Unclassified	root	N/A	43.52 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.70 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	30.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	30.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.93 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.56 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	3.70 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %
Aestuariivirgaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae	0.93 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	3.70 %
Aestuariivirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga	0.93 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium	3.70 %
unclassified Aestuariivirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga	0.93 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
unclassified Candidatus Anammoximicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium	3.70 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.56 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	3.70 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	0.93 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	0.93 %
beta proteobacterium L13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104415807	Not Available	625	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105016520	Not Available	705	Open in IMG/M
3300000559\|F14TC_109120698	Not Available	714	Open in IMG/M
3300000955\|JGI1027J12803_102500676	Not Available	654	Open in IMG/M
3300004114\|Ga0062593_102108460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300004156\|Ga0062589_100010594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3818	Open in IMG/M
3300004463\|Ga0063356_100608732	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300004463\|Ga0063356_106162842	Not Available	514	Open in IMG/M
3300004480\|Ga0062592_100686608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	888	Open in IMG/M
3300004643\|Ga0062591_100023503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3057	Open in IMG/M
3300004778\|Ga0062383_10269275	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300004779\|Ga0062380_10387270	Not Available	606	Open in IMG/M
3300005093\|Ga0062594_102410374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300005294\|Ga0065705_10898311	Not Available	576	Open in IMG/M
3300005331\|Ga0070670_100421345	Not Available	1180	Open in IMG/M
3300005345\|Ga0070692_11423250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300005347\|Ga0070668_100321374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300005347\|Ga0070668_100577515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	981	Open in IMG/M
3300005353\|Ga0070669_101242311	Not Available	644	Open in IMG/M
3300005356\|Ga0070674_102167032	Not Available	507	Open in IMG/M
3300005364\|Ga0070673_102043078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300005440\|Ga0070705_100343804	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300005440\|Ga0070705_100602796	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005444\|Ga0070694_100073925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2355	Open in IMG/M
3300005444\|Ga0070694_101436435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium L13	583	Open in IMG/M
3300005458\|Ga0070681_10891555	Not Available	808	Open in IMG/M
3300005471\|Ga0070698_101097692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300005471\|Ga0070698_102107382	Not Available	517	Open in IMG/M
3300005518\|Ga0070699_100817357	Not Available	853	Open in IMG/M
3300005549\|Ga0070704_100983875	Not Available	762	Open in IMG/M
3300005577\|Ga0068857_101187786	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	738	Open in IMG/M
3300005764\|Ga0066903_106188987	Not Available	626	Open in IMG/M
3300005764\|Ga0066903_106280995	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300005764\|Ga0066903_107987258	Not Available	543	Open in IMG/M
3300005840\|Ga0068870_10641960	Not Available	726	Open in IMG/M
3300006844\|Ga0075428_100456469	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300006844\|Ga0075428_101564672	Not Available	690	Open in IMG/M
3300006845\|Ga0075421_100473588	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300006845\|Ga0075421_102226353	Not Available	578	Open in IMG/M
3300006847\|Ga0075431_101417691	Not Available	654	Open in IMG/M
3300006865\|Ga0073934_10376052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300006871\|Ga0075434_100436104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1331	Open in IMG/M
3300006881\|Ga0068865_101284447	Not Available	650	Open in IMG/M
3300006904\|Ga0075424_100162387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2368	Open in IMG/M
3300009094\|Ga0111539_10043115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5411	Open in IMG/M
3300009094\|Ga0111539_10286415	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300009100\|Ga0075418_11179030	Not Available	830	Open in IMG/M
3300009100\|Ga0075418_11446578	Not Available	746	Open in IMG/M
3300009156\|Ga0111538_10035802	All Organisms → cellular organisms → Bacteria	6419	Open in IMG/M
3300009156\|Ga0111538_10227114	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300009156\|Ga0111538_10592951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1405	Open in IMG/M
3300009176\|Ga0105242_13104307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300010046\|Ga0126384_10095058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2184	Open in IMG/M
3300010391\|Ga0136847_11797084	Not Available	772	Open in IMG/M
3300010391\|Ga0136847_12629485	Not Available	801	Open in IMG/M
3300010397\|Ga0134124_10084182	All Organisms → cellular organisms → Bacteria	2740	Open in IMG/M
3300010398\|Ga0126383_13600485	Not Available	506	Open in IMG/M
3300010399\|Ga0134127_10107621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2456	Open in IMG/M
3300010399\|Ga0134127_11529359	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012901\|Ga0157288_10274264	Not Available	578	Open in IMG/M
3300012913\|Ga0157298_10209964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300012948\|Ga0126375_10544189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300014320\|Ga0075342_1177674	Not Available	592	Open in IMG/M
3300014885\|Ga0180063_1003951	All Organisms → cellular organisms → Bacteria	4018	Open in IMG/M
3300015371\|Ga0132258_10698033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2554	Open in IMG/M
3300015373\|Ga0132257_101060250	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300017792\|Ga0163161_12060946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300018064\|Ga0187773_10886775	Not Available	575	Open in IMG/M
3300019487\|Ga0187893_10414363	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300025903\|Ga0207680_10776625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300025908\|Ga0207643_10545511	Not Available	744	Open in IMG/M
3300025912\|Ga0207707_10754467	Not Available	813	Open in IMG/M
3300025923\|Ga0207681_10141335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1793	Open in IMG/M
3300025923\|Ga0207681_10532474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	965	Open in IMG/M
3300025923\|Ga0207681_10897180	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300025925\|Ga0207650_10285969	Not Available	1343	Open in IMG/M
3300025925\|Ga0207650_11429259	Not Available	588	Open in IMG/M
3300025926\|Ga0207659_11351705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300025933\|Ga0207706_10213773	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1690	Open in IMG/M
3300025933\|Ga0207706_10737156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	840	Open in IMG/M
3300025940\|Ga0207691_11299943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300025960\|Ga0207651_11850089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300025960\|Ga0207651_11985594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300025972\|Ga0207668_10398713	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	1163	Open in IMG/M
3300026118\|Ga0207675_100418065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1324	Open in IMG/M
3300026118\|Ga0207675_102517631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	525	Open in IMG/M
3300027840\|Ga0209683_10203548	Not Available	909	Open in IMG/M
3300027907\|Ga0207428_10131419	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300027907\|Ga0207428_10315986	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300028380\|Ga0268265_10332368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1381	Open in IMG/M
3300028381\|Ga0268264_11073673	Not Available	813	Open in IMG/M
3300028592\|Ga0247822_10931805	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	714	Open in IMG/M
3300028809\|Ga0247824_10914917	Not Available	549	Open in IMG/M
3300030336\|Ga0247826_10499328	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	919	Open in IMG/M
3300031538\|Ga0310888_10624300	Not Available	656	Open in IMG/M
3300031944\|Ga0310884_10829157	Not Available	567	Open in IMG/M
3300032164\|Ga0315283_10289804	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300032179\|Ga0310889_10783171	Not Available	502	Open in IMG/M
3300033502\|Ga0326731_1134946	Not Available	567	Open in IMG/M
3300033550\|Ga0247829_10433962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300033551\|Ga0247830_10868662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300034668\|Ga0314793_146106	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.85%
Host-Associated	Host-Associated	48.15%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.15%
Terrestrial	Environmental → Terrestrial	43.52%
Aquatic	Environmental → Aquatic	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.89%
Freshwater	Environmental → Aquatic → Freshwater	5.56%
Marine	Environmental → Aquatic → Marine	0.93%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Peat	Environmental → Terrestrial → Peat	0.93%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.11%
Lake	Environmental → Aquatic → Freshwater → Lake	2.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	12.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.63%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1044158071	3300000364	Soil	DPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
INPhiseqgaiiFebDRAFT_1050165202	3300000364	Soil	AGVPLVDTGGGSHGSVNVSLTKGTVKMKVTGLPALPAQPPGASFTAYVYKAYLTSSADPAVEIFLADVYPSGAGSAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTATLQ*
F14TC_1091206982	3300000559	Soil	MRXXXXXXXXXXPLTASAAGVPLVDTGGGSHGSVNVSLTKGTVKMKVTGLPALPAQPPGXXXXXYVYKAYLTSSADPAVEIFLADVYPSGAGSAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTATLQ*
JGI1027J12803_1025006762	3300000955	Soil	PLTASAAGVPLVDTGGGSHGSVNVSLTKGTVKMKVTGLPALPAQPPGASFTAYVYKAYLTSSADPAVEIFLADVYPSGAGSAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTATLQ*
Ga0055490_100158291	3300004052	Natural And Restored Wetlands	TLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0062593_1021084601	3300004114	Soil	APLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0062589_1000105943	3300004156	Soil	VVWKTIAALVLVAPLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPHLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0063356_1006087322	3300004463	Arabidopsis Thaliana Rhizosphere	MRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTEPAVEVYLVDVYPNSKGAAKAKVALRGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ*
Ga0063356_1061628421	3300004463	Arabidopsis Thaliana Rhizosphere	PFALLTTSMCWVGGGVVMVKRLVVVTLALLAPVGALAAGVPLVDAGGGSHGSVSANLAKGSVKMKITGLAPLPAQVPGTSVTAYVYKAYLTSSADAAVEVFLADVYPNAKQSAKPKVAFKGDLSRLGLDRVVVVAFSKDARDAVDVLTATLGQ*
Ga0062592_1006866082	3300004480	Soil	MRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAPFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ*
Ga0062591_1000235033	3300004643	Soil	LMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0062383_102692751	3300004778	Wetland Sediment	MVKRLAVGLLFALVVPAMTFGAGVPLVDAGGGSHGSAAANLAKGSVKMKITGLPTLPAQPPGASFTAYVYKAYLASSADPAVEVFLTDVYPNAKQSASTKVALKGDVSRLGLDRIVVVAFSKDAREAFDVLTATLAQ*
Ga0062380_103872702	3300004779	Wetland Sediment	AAANLAKGSVKMKITGLPTLPAQPPGASFTAYVYKAYLASSADPAVEVFLTDVYPNAKQSASTKVALKGDVSRLGLDRIVVVAFSKDAREAFDVLTATLAQ*
Ga0062594_1024103741	3300005093	Soil	MTTRWAPTLFLSLACAATTAAGGVPLVDASGGSHGSVIASLAKGSVKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAALP*
Ga0065705_108983111	3300005294	Switchgrass Rhizosphere	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0070670_1004213452	3300005331	Switchgrass Rhizosphere	VRIARTIAFALVLGVAGAAIAGGVPLVDASGGSHGSANVNLAKGSVKMKITGLPRLPAPAPLGSGFDAYVYKAYLVSSADAAVEVYLADVFPSSSGAAKVKVAPKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP*
Ga0070692_114232501	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MVVWKTIAALVLVAPLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKSIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVL
Ga0070668_1003213742	3300005347	Switchgrass Rhizosphere	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLAATLQ*
Ga0070668_1005775152	3300005347	Switchgrass Rhizosphere	ASGGSHGSANVSLTKGSVKMKVAGLPRLPAAAPLGAGFDAYVYKAYLVSSADPAVEVYLADVFPSSSGAAKIKVAPKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP*
Ga0070669_1012423111	3300005353	Switchgrass Rhizosphere	MVVWRIFLALVVAAPLSARAAGVPLLDGAGGAHGTAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLAATLQ*
Ga0070674_1021670321	3300005356	Miscanthus Rhizosphere	MVVWRIFLALVVAAPLSARAAGVPLLDGAGGAHGTAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRV
Ga0070673_1020430781	3300005364	Switchgrass Rhizosphere	MRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAAFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ*
Ga0070705_1003438042	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MWRMVVTLVLALPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0070705_1005238862	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KGVVKMKITGLPALPGQPPGASFTAHVYKAYLVSSGDAAVEIFLADVYPSGAGAAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTASIAP*
Ga0070705_1006027961	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MMLRMALVALGLVLPSLATAAGVPLVDASGGSHGSVTAALAKGVVKMKITGLPALPGQPPGASFTAHVYKAYLVSSADAAVEIFLADVYPNGAGAAKPKTKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTASIAP*
Ga0070694_1000739252	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MVVWKTIAALVLVAPLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKSIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0070694_1014364351	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIVLTLGLLLPATTMAAGIPLLDSTGAPHGSASVSLGKGTVKMKITGLPALPAQPPGASFTAYVYKAYLVSSTDAAVEIFLADVYPSGAGSAKPKAKLGGDVSRLGLDRVVVTAYSKDARDAFDVLTATLAP*
Ga0070681_108915551	3300005458	Corn Rhizosphere	TRRCTGPKAGTTFPSARPETEDHVRTARIIALALVLGVAGTATAGGVPLVDASGGSHGSANVNLTKGSVKMKVTGLPRLPAAAPLGAGFDAYLYKAYLVSSADAAVEVYLADVFPSSSGSAKVKMTPKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP*
Ga0070698_1010976921	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVVWRMVVALVLVAPLLARAAGVPLLDPAGGTHGSAAVTLAKGSVRMKITGLPQLPATAPLGATFSAYVYKAYLTSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGFDRVVVTAYSKDARESLDVLTATLQ*
Ga0070698_1021073821	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GVAGSASAGGVPLVDASGGSHGSANVNLTKGSVKMKVTGLPRLPAAAPLGAGFDAYVYKAYLVSSADAAVEVYLADVFPTSSGSAKVKVTPKGDLSALGVDRLVVTAYSKDARGSFDVLTAALP*
Ga0070699_1008173572	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMLRMALVALGLVLPSLATAAGVPLVDASGGSHGSVTAALAKGVVKMKITGLPALPGQPPGASFTAHVYKAYLVSSGDAAVEIFLADVYPSGAGAAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTASIAP*
Ga0070704_1009838751	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMLRMALVALGLVLPGLATAAGVPLVDASGGSHGSVTAALAKGVVKMKITGLPALPGQPPGASFTAHVYKAYLVSSADAAVEIFLADVYPNGAGAAKPKTKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTASIAP*
Ga0068857_1011877862	3300005577	Corn Rhizosphere	MRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAAFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKD
Ga0066903_1061889871	3300005764	Tropical Forest Soil	MRTIVLTLGLLLPATTLAAGIPLLDSTGAPHGSATVSLTKGTVKMKITGLPALPAQPPGASFTAYVYKAYLVSSTDAAVEIFLADVWPSGAGSAKPKAKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTATLTP*
Ga0066903_1062809952	3300005764	Tropical Forest Soil	AASAAHGSASVSLVKGTVKMKVVGLPRLPATQPLGATFDASVYKAYLTASADAAIEVFVADVFPNASGVAKVKMAPKGDLSALGLDRLVITAYSKDARSSLDVLTAALQ*
Ga0066903_1079872581	3300005764	Tropical Forest Soil	LMIVRSLVLALVLAVPLAARAGGVPLLDQASSSHGSVVAVLAKGTVKMKVTGLPRLPASQPLGATFDAYLYKTYLVSSADPAVEVFLGDLWPNASGAAKLKVTPPKGDLSALGLDRVVVTAYSKDARSAFDVLSATVH*
Ga0068870_106419602	3300005840	Miscanthus Rhizosphere	ASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0075428_1004564692	3300006844	Populus Rhizosphere	VVRRILLALVLAAPLAAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0075428_1015646722	3300006844	Populus Rhizosphere	MWRMVVTLVLAMPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGVDRVVVTAYSKDARESLDVLTATLQ*
Ga0075421_1004735882	3300006845	Populus Rhizosphere	MTWRFLAALLVVAPLTAGAAGVPLLDGAGGSHGSAAVNLSKGSVKMKISGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ*
Ga0075421_1022263531	3300006845	Populus Rhizosphere	MWRMVVTLVLVVPLSARAAGAPLLDPAGAPHGSAAVTLTKGSVKMKITGLPQLPATAPLGATFSAYVYKAYLTSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGLDRVVVTAYSK
Ga0075431_1014176911	3300006847	Populus Rhizosphere	MVVTLVLVVPLSARAAGAPLLDPAGAPHGSAAVTLTKGSVKMKITGLPQLPATAPLGATFSVYVYKAYLTSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0073934_103760522	3300006865	Hot Spring Sediment	MRTIVLVLGLLVPATVMGAGVPLLDSTGAPHGSASVSLAKGTVKMKITGLPALPAQPPGASFTAYVYKAYLVSSADPAVEVFLADVYPTGSGAAKPKAKLGGDVSRLGLDRVVVTAYSKDARDAFDVLTATLAP*
Ga0075434_1004361042	3300006871	Populus Rhizosphere	VPLVVAAAGVPLVDPAGGSHGSVVASLSKGSVKMKITGLPRLPATQPLGATFDAYVYKAYLVSSADPAVEVYLADVYPNGSGAAKTKVALKGDLSALGLDRVVVTAYSKDARASLDVLTATLQ*
Ga0068865_1012844472	3300006881	Miscanthus Rhizosphere	AGGAHGTAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0075424_1001623872	3300006904	Populus Rhizosphere	MVVRLLALVLGVPLVVAAAGVPLVDPAGGSHGSVVASLSKGSVKMKITGLPRLPATQPLGATFDAYVYKAYLVSSADPAVEVYLADVYPNGSGAAKTKVALKGDLSALGLDRVVVTAYSKDARASLDVLTATLQ*
Ga0111539_100431153	3300009094	Populus Rhizosphere	MVMWRMVVTLVLALPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0111539_102864152	3300009094	Populus Rhizosphere	MVVRWILLALVLAAPLAAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0075418_111790302	3300009100	Populus Rhizosphere	VKTARIIALTLVLGVAGTATAGGVPLVDASGGSHGSANVNLTKGSVKMKITGLPRLPATAPLGAGFDAYVYKAYLVSSADAAVEVYLADVFPSTSGAAKVKVAAKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP*
Ga0075418_114465782	3300009100	Populus Rhizosphere	MAAPLPAHAAGVPLLDGAGAPHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATISAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0111538_100358022	3300009156	Populus Rhizosphere	MVMWRMVVTLVLAMPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0111538_102271142	3300009156	Populus Rhizosphere	MVVRRILLALVLAAPLAAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0111538_105929512	3300009156	Populus Rhizosphere	HAAGFPLVDGAGGAHGSAGVTLAKGSVKMKITGLPQLPAAQPLGAPFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ*
Ga0105242_131043071	3300009176	Miscanthus Rhizosphere	MRTIVLTLGLLLPATTMAAGIPLLDSTGAPHGSASVSLGKGTVKMKITGLPALPAQPPGASFTAYVYKAYLVSSTDAAVEIFLADVYPSGAGSAKPKAKLGGDVSRLGLDRVVVTAYSKDARDAFDVLTATLA
Ga0126384_100950583	3300010046	Tropical Forest Soil	MRLRTVVLLLGLAAPTLGHAAGIPLLDATSAAHGSASVSLVKGTVKMKVTALAQLPAVQPLGATFDAYVYKAYLTSSTDAAVEVFVADLFPNLKGVAKVKVAPKGDLSALGLDRLVVTAYSKDARSSLDVLTAALP*
Ga0136847_117970842	3300010391	Freshwater Sediment	VAAAAGVPLVDPGGASHGSVSVSLAKGTVKMKIAGLPRLPATQPLGATFDAFVYKAYLTSSADPAVEVFLADVYPNGAGTAKSKVALKGDLGALGLDRVVVTAYSKDARDALDVLTATLP
Ga0136847_126294852	3300010391	Freshwater Sediment	MRRIVAALLLVVPIAAGAAGVPFVDSGGASHGSVKASLTKGSVKMKITGLPTLPAVPPGATFTAYVYKTYLTSTADPAVEIFLVDVYPSAKQSSSNKVALKGDVSQLGLNRVVVTAYSKDARESFDVLTAAIAP*
Ga0134124_100841822	3300010397	Terrestrial Soil	MRMRTIALVVGLAATASAMGVPLLDSSGGSHGSVSASLSKGQVKMKITGLPALPAQAPGAAFTAYVYKAYLTSTADAAVEIFLADVYPNGKGSAKPKVKLGGDVSRLGLNRVVVTAYSKDARDSFDVLTAAIAP*
Ga0126383_136004852	3300010398	Tropical Forest Soil	DAASAAHGSASVSLVKGTVKMKVVGLPRLPATQPLGATFDASVYKAYLTASADAAIEVFVADVFPNASGVAKVKMAPKGDLSALGLDRLVITAYSKDARSSLDVLTAALQ*
Ga0134127_101076212	3300010399	Terrestrial Soil	MLLRMALVVLALMVPRPAMAAGVPLVDASGGSHGSVTAALTKGVVKMKITGLPALPGQPPGASFTAHVYKAYLVSSGDAAVEIFLADVYPSGAGAAKPKVKLGGDVSRLGLDRVVVTAYSKDARDSFDVLTASIAP*
Ga0134127_115293592	3300010399	Terrestrial Soil	LLDPAGAPHGSAAVTLTKGSVKMKITGLPQLPATAPLGATFSAYVYKAYITSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0157288_102742641	3300012901	Soil	LDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0157298_102099642	3300012913	Soil	MVVWKTIAALVLVAPLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKGIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0137407_121620741	3300012930	Vadose Zone Soil	SLTKGQVKMKVTGLPALPAQPPGAAFTAYVYKAYLTSTADAAVEIFLADVYPSGAGAAKPKVKLGGDVSRLGLNRVVVTAYSKDARDAFDVLTASIAP*
Ga0126375_105441892	3300012948	Tropical Forest Soil	MRLWTLVLLLGLAAPTPGRAAGIPLLDATSAAHGSASVSLVKGTVRMKVTALPQLPATQPLGATFDAYVYKAYLTSSTDAAVEVFVADLFPNLKGVAKVKAAPKGDLSALGLDRLVVTAYSKDARSSLDVL
Ga0075342_11776741	3300014320	Natural And Restored Wetlands	SVPLLDGAGGAHGTAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ*
Ga0180063_10039512	3300014885	Soil	MVVRMTGVGLGLILSGAAMAAGVPLVDPTGGNHGSVTAALPKGVVKMKITGLPALPAQPPGGTFTAYVYKAYLTSTADASVEIFLADVYPSGSGAAKPRVKLGGDVSRLGLNRVVVTAYSKDARESVDVLTGAIAP*
Ga0132258_106980332	3300015371	Arabidopsis Rhizosphere	MVMWRMVVTLVLALPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLE*
Ga0132258_134956622	3300015371	Arabidopsis Rhizosphere	TLAKGSVKMKITGLPQLPATAPLGATFSAYVYKAYLTSSGDPAVEIFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ*
Ga0132257_1010602502	3300015373	Arabidopsis Rhizosphere	MVMWRMVVTLVVALPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ
Ga0163161_120609461	3300017792	Switchgrass Rhizosphere	LAKGSVKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAALP
Ga0187773_108867751	3300018064	Tropical Peatland	AGVPLVDASGGSHGSVNASLTKGTVKLKVTGLPTLPAQPPGASFTAYVYKAYLTSTTDAAVEIFLADVYPSAAQKASLRVALKGDVSRLGLNRVVVTAYSKDARDASDVLTAAIAP
Ga0187893_104143631	3300019487	Microbial Mat On Rocks	MMWKIFAALTLAAPLSAMAAGVPLLDAAGTPHGKASVSLIKGTVKMKITGLSRLVATQPLGATFDAYVYKTYLTSSVDPAVEIFLVDVYPNGAGTAKAKVALKGDLSGLGLDRVVVTAYSKDARQSFDVLTAT
Ga0207680_107766251	3300025903	Switchgrass Rhizosphere	RRPDASGGSHGSVIASLAKGSVKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAALP
Ga0207643_105455112	3300025908	Miscanthus Rhizosphere	ASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ
Ga0207707_107544672	3300025912	Corn Rhizosphere	VRTARIIALALVLGVAGTATAGGVPLVDASGGSHGSANVNLTKGSVKMKVTGLPRLPAAAPLGAGFDAYLYKAYLVSSADAAVEVYLADVFPSSSGSAKVKMTPKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP
Ga0207681_101413352	3300025923	Switchgrass Rhizosphere	MTTRWAPTLFLSLACAATTAAGGVPLVDASGGSHGSVIASLAKGSVKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAALP
Ga0207681_105324741	3300025923	Switchgrass Rhizosphere	QWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAPFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ
Ga0207681_108971802	3300025923	Switchgrass Rhizosphere	VVWRIFLALVVAAPLSARAAGVPLLDGAGGAHGTAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLAATLQ
Ga0207650_102859692	3300025925	Switchgrass Rhizosphere	VRIARTIAFALVLGVAGAAIAGGVPLVDASGGSHGSANVNLAKGSVKMKITGLPRLPAPAPLGSGFDAYVYKAYLVSSADAAVEVYLADVFPSSSGAAKVKVAPKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP
Ga0207650_114292591	3300025925	Switchgrass Rhizosphere	VVAAPLSAHAAGVPLLDGAGGSHGTAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKTYLTSSTDPAVEVFLADVYPNAKGVAKSKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0207659_113517051	3300025926	Miscanthus Rhizosphere	LVDGAGSAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAAFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ
Ga0207706_102137732	3300025933	Corn Rhizosphere	MVVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARGSFDVLTAALP
Ga0207706_107371562	3300025933	Corn Rhizosphere	VVWKTIAALVLVAPLMAQAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKSIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0207691_112999431	3300025940	Miscanthus Rhizosphere	SHGSANVNLTKGSVKMKITGLPQLPAAQPLGAAFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARESLDVLTATLQ
Ga0207651_118500892	3300025960	Switchgrass Rhizosphere	ATTAAGGVPLVDASGGSHGSVIASLAKGSVKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAAL
Ga0207651_119855942	3300025960	Switchgrass Rhizosphere	RGPMRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGAAFSAYVYKAYLTSSTDPAVEVYLVDVYPNGKGAAKAKVALKGDLSLLGLDRLVVTAYSKDARDSLDVLTATLQ
Ga0207668_103987132	3300025972	Switchgrass Rhizosphere	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPATQPLGATFSAYVYKAYLTSSTDPAVEVFLADVYPNAKGVAKAKVALKGDLSLLGLDRVVVTAYSKDARDSLDVLAATLQ
Ga0207675_1003554131	3300026118	Switchgrass Rhizosphere	VKLKVTGLPRLPATQPLGAAFDAYVYKAYLVSSGDPAVEVYLADVFPSSSGAAKVKVAPRGDLSALGLDRLIVTAYSKDARGSFDVLTAALP
Ga0207675_1004180652	3300026118	Switchgrass Rhizosphere	VVWKTIAALVLVAPLMARAAGVPLLDPAGGSHGTAAVTLSKGSVRMKITGLPQLPAANPLGATFTAYVYKAYLTSSADPAVEVFVADVYPNGKSIAKAKAAFKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0207675_1025176311	3300026118	Switchgrass Rhizosphere	EPITLKKPMALIAMPANSLLMPCSRKKGGRWMVMWRMVVTLVLALPLAAGAAGAPLLDPAGAPHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0209683_102035482	3300027840	Wetland Sediment	MVKRLAVGLLFALVVPAMTFGAGVPLVDAGGGSHGSAAANLAKGSVKMKITGLPTLPAQPPGASFTAYVYKAYLASSADPAVEVFLTDVYPNAKQSASTKVALKGDVSRLGLDRIVVVAFSKDAREAFDVLTATLAQ
Ga0207428_101314192	3300027907	Populus Rhizosphere	MWRMVVTLVLALPLSAGAAGAPLLDPAGASHGSAAVTLAKGSVKMKITGLPQLPANAPLGATFSAYVYKAYLTSSGDPAVEVFIADVYPNSKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ
Ga0207428_103159862	3300027907	Populus Rhizosphere	MVVRRILLALVLAAPLAAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0268265_103323682	3300028380	Switchgrass Rhizosphere	MRRSQWRWTVVWRMFLALVMAAPLSAHAAGFPLVDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAAQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0268264_110736731	3300028381	Switchgrass Rhizosphere	AAGIPLVDSGGGSHGSVSVSLTKGTVKMKVTGLPALPAQPPGASFTAYVYKAYLVSSADAAVEVYLADVFPSSSGAAKVKVAAKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP
Ga0247822_109318052	3300028592	Soil	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAVQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYAKDARDSLDVLTATLQ
Ga0247824_109149171	3300028809	Soil	VVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAVQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0247826_104993282	3300030336	Soil	MVVRRILLALVLAAPLPAHAAGVPLLDGAGGAHGSAAVTLAKGSVKMKITGLPQLPAVQPLGATFSAYVYKAYLTSSTDPAVEVFVADVYPNAKGVAKTKIALKGDLSLLGLDRVVVTAY
Ga0310888_106243001	3300031538	Soil	MWRMVLALVLAVPLSARAAGVPLLDGAGGSHGTAAVTLAKGSVKMKITGLPQLPAAQPLGATFTAYVYKAYLTSSADPAVEVFVGDVYPNAKGVAKAKVALKGDLSLLGLDRVTVTAYSKDAREALDVLTATLQ
Ga0310884_108291571	3300031944	Soil	MTWRFLVALLVLAPLSAGAAGVPLLDGAGGSHGSAAVNLTKGSVKMKISGLPQLPAAQPLGATFSAYVYKAYLTSSADPAVEIFVGDVYPNAKGVAKAKVTLKGDVSLLGLDRVVVTAYSKDARDSLDVLTATLQ
Ga0307415_1024261381	3300032126	Rhizosphere	LTKGSVKLKVTGLPRLPAAAPLGAGFDAYVYKAYLVSSADPAVEVYLADVFPSSSGAAKVKVAPKGDVSALGLDRLVVTAYSKDARGSFDVLTAALP
Ga0315283_102898042	3300032164	Sediment	MVKRVMALWFGLVVPGLAMAGGIPLLDSTGAPHGSAVVSTTKGTVKMKITGLPALPAQPPGATLTAYVYKAYLTSSTDAAVEIFLVDVYPNGSGAAKPKVKLGGDVSRLGLDRLVVTAFSKDARESADVLTAILQ
Ga0310889_107831712	3300032179	Soil	LVDASGGSHGSTNVNLTKGSVKMKITGLPRLPAPAPLGAGFDAYVYKAYLVSSADAAVEVYLADVFPSSSGAAKVKVAAKGDLSALGLDRLVVTAYSKDARGSFDVLTAALP
Ga0326731_11349461	3300033502	Peat Soil	MLRSLVLVVGLAFPLLARAAGIPLLAADSSSHGSVSVSLAKGSVKMKVIGLPRLPATQPLGATFDAYVYKAYLASSADPAVEVFLMDVYPNGSGSAKVKVALKGDLSTMGLDRVAVTAFSKDARDSFDVLTATLR
Ga0247829_104339622	3300033550	Soil	VWRTVVALVLVAPLMASAAGVPLLDPAGGSHGSASVTLAKGSVRMKITGLPQLPATAPLGATFSAYVYKAYLTSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ
Ga0247830_108686622	3300033551	Soil	VVWRTVVALVLVAPLMASAAGVPLLDPAGGSHGSASVTLAKGSVKMKITGLPQLPATAPLGATFSAYVYKAYLTSSSDPAVEIFIADVYPNAKGVAKAKAALKGDLSLLGLDRVVVTAYSKDARESLDVLTATLQ
Ga0314793_146106_80_469	3300034668	Soil	LVLGVAGTVIAGGVPLVDASGGSHGSTNVNLTKGSVKMKITGLPRLPAPAPLGAGFDAYVYKAYLVSSTDAAMEIPLGGLYPTAKKKASVKSALKGDLSSASFGFDRVVVVAYSKDGLSSFDVLTGTIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences