NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090034

Metagenome Family F090034

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090034
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 73 residues
Representative Sequence MRVRYASRIVTRVFTLVVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFW
Number of Associated Samples 94
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.34 %
% of genes near scaffold ends (potentially truncated) 75.00 %
% of genes from short scaffolds (< 2000 bps) 72.22 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.444 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(10.185 % of family members)
Environment Ontology (ENVO) Unclassified
(53.704 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(75.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 56.00%    β-sheet: 0.00%    Coil/Unstructured: 44.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF03551PadR 22.22
PF00239Resolvase 0.93
PF11806Enterochelin_N 0.93
PF13946DUF4214 0.93
PF03704BTAD 0.93
PF02518HATPase_c 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 22.22
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 22.22
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 22.22
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.93
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.93
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 0.93
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.44 %
UnclassifiedrootN/A30.56 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886011|MRS1b_contig_9307431All Organisms → cellular organisms → Bacteria → Acidobacteria919Open in IMG/M
3300004156|Ga0062589_101826193All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300004156|Ga0062589_102732982Not Available514Open in IMG/M
3300004463|Ga0063356_105561815All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300004480|Ga0062592_102563234Not Available514Open in IMG/M
3300004643|Ga0062591_101279103All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300005093|Ga0062594_102320404All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300005093|Ga0062594_103380740All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300005290|Ga0065712_10430584All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300005293|Ga0065715_11148246All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300005331|Ga0070670_102061862All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300005337|Ga0070682_100716439All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300005340|Ga0070689_100130415All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300005343|Ga0070687_101126456All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300005353|Ga0070669_100049301All Organisms → cellular organisms → Bacteria3075Open in IMG/M
3300005406|Ga0070703_10513869All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300005440|Ga0070705_100181956All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300005526|Ga0073909_10001891All Organisms → cellular organisms → Bacteria → Proteobacteria6285Open in IMG/M
3300005530|Ga0070679_101128218All Organisms → cellular organisms → Bacteria → Acidobacteria729Open in IMG/M
3300005530|Ga0070679_102102741Not Available514Open in IMG/M
3300005539|Ga0068853_101897536All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300005545|Ga0070695_100069720All Organisms → cellular organisms → Bacteria2298Open in IMG/M
3300005545|Ga0070695_100916493All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005546|Ga0070696_100754241All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300005546|Ga0070696_101818833All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300005547|Ga0070693_100801895All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300005549|Ga0070704_101547710All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300005617|Ga0068859_100997725All Organisms → cellular organisms → Bacteria → Acidobacteria919Open in IMG/M
3300005618|Ga0068864_100631454All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1042Open in IMG/M
3300005618|Ga0068864_101765416All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005719|Ga0068861_100487675All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300005844|Ga0068862_101922694All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300006046|Ga0066652_100624092All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1019Open in IMG/M
3300006844|Ga0075428_102000611All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300006852|Ga0075433_10329256All Organisms → cellular organisms → Bacteria → Acidobacteria1351Open in IMG/M
3300006854|Ga0075425_100552867All Organisms → cellular organisms → Bacteria → Acidobacteria1325Open in IMG/M
3300006954|Ga0079219_11917430All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300009147|Ga0114129_11911672All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300009148|Ga0105243_12411959All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300009162|Ga0075423_11584585All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300009174|Ga0105241_11832676All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300009176|Ga0105242_11342314All Organisms → cellular organisms → Bacteria → Acidobacteria740Open in IMG/M
3300010360|Ga0126372_10276060All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300010397|Ga0134124_11179255All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300010399|Ga0134127_11764674All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300010400|Ga0134122_12180769All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300010403|Ga0134123_10519541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1125Open in IMG/M
3300011119|Ga0105246_10248163All Organisms → cellular organisms → Bacteria → Acidobacteria1411Open in IMG/M
3300012905|Ga0157296_10337859All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300012960|Ga0164301_10164767All Organisms → cellular organisms → Bacteria → Acidobacteria1373Open in IMG/M
3300013102|Ga0157371_11582039Not Available513Open in IMG/M
3300013297|Ga0157378_12314631All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300013307|Ga0157372_11766912All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300014325|Ga0163163_11288394All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300014326|Ga0157380_12481254All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300025885|Ga0207653_10120399All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300025900|Ga0207710_10262323All Organisms → cellular organisms → Bacteria → Acidobacteria866Open in IMG/M
3300025914|Ga0207671_10420797All Organisms → cellular organisms → Bacteria → Acidobacteria1063Open in IMG/M
3300025921|Ga0207652_11724779Not Available531Open in IMG/M
3300025923|Ga0207681_10424107All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300025932|Ga0207690_11412340All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300025933|Ga0207706_10722242All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300025941|Ga0207711_11835035All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300025945|Ga0207679_11267674All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300025961|Ga0207712_10511871All Organisms → cellular organisms → Bacteria → Acidobacteria1027Open in IMG/M
3300026035|Ga0207703_11358596All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300026041|Ga0207639_11754402All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300026075|Ga0207708_10895111All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300026089|Ga0207648_10509101All Organisms → cellular organisms → Bacteria → Acidobacteria1102Open in IMG/M
3300026095|Ga0207676_11712205All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300026095|Ga0207676_12158859Not Available555Open in IMG/M
3300026116|Ga0207674_10702298All Organisms → cellular organisms → Bacteria → Acidobacteria976Open in IMG/M
3300026116|Ga0207674_11445028All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300026116|Ga0207674_11824442Not Available575Open in IMG/M
3300028380|Ga0268265_11583592All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300030511|Ga0268241_10044079All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300031852|Ga0307410_10520458All Organisms → cellular organisms → Bacteria → Acidobacteria982Open in IMG/M
3300031944|Ga0310884_10710040All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300031995|Ga0307409_102046520All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300032005|Ga0307411_11163281All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300032126|Ga0307415_102168842All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300033412|Ga0310810_10398392All Organisms → cellular organisms → Bacteria1422Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.19%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.19%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.56%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886011Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034220Biocrust microbial communities from Mojave Desert, California, United States - 17HMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MRS1b_0578.000023302162886011Miscanthus RhizosphereMRVRYASRIVTRVFTLVVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFW
Ga0062589_10182619313300004156SoilMLVSFASRIVTSVFTLLIMTASLATNVTVDQESTGTLKDQPSSPRLLALRDRLISGDRTALDKFWNEINEQGAPIIEPAAD
Ga0062589_10273298213300004156SoilMRVRFASRIVTRVFTLLVITASLATNVRVSATLRVSYQKRTETLNDQPSSPR
Ga0063356_10556181513300004463Arabidopsis Thaliana RhizosphereMRVRYASRIVTRVFTLLVMSAMLTTNAYVSATLSGVIQESTGTLNDQPSSPRLLALRDRLTSGDRTALDKFWKEISE
Ga0062592_10256323423300004480SoilMLVSFASRIGTRVFMLLIMTASLATNAPVSATLPVNDQPSSPRLLALRDRLTSGDRTALDKFWNEIN
Ga0062591_10127910323300004643SoilMRVRYASRIVTRVFTLFVMTASLTTSVRVSATLRALYQEKTGTLSDQLMSPRLLALRNRLNSGDRTALDKFWKEISEQGAPIIEPVAGSDSDLLVTMLWRGKEETKNVFVFRLGDVSKPMTRLLD
Ga0062594_10232040423300005093SoilMRVSYASRIVTRVFTLLVIAASLTTNARACQESTGTLNDQP
Ga0062594_10338074023300005093SoilMRVSFASRIVTRVFTLLLMTASLATNVLAQERTGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAPIIEPA
Ga0065712_1043058423300005290Miscanthus RhizosphereMRVRYASRIVIRVFTLLVMTASLTTDVSVSATLSGVVQENILNDQPSSPRLLALRDRLTSGDRTALDKFW
Ga0065715_1114824613300005293Miscanthus RhizosphereMRVRFVSRIVTRVFTLLIMTASLVTNVSVSATSSVTLDDQPSSPRLLALRDRLT
Ga0070670_10206186223300005331Switchgrass RhizosphereMRAWYASRIVTRVFTLLVMTASLTTNARVFQESTGTLNDQPSSPRLLALRDR
Ga0070682_10071643913300005337Corn RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVVVSATFRALRQEKTGTLNDQLSSPRLLALRDRLTSGDRTALDKFWKEISEQG
Ga0070689_10013041513300005340Switchgrass RhizosphereMRVSIASRIVTRVFTLLVMTASLATNVTVSATLLVHHEKSGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAPIIEPAADSNHELL
Ga0070687_10112645613300005343Switchgrass RhizosphereMRVRFAFRIVTRVSTLVVMTASLATNAPRSATLPALASRLSDPESTRTLDDELASPRLLALRDRITSGDRTALDNFWKEITE
Ga0070669_10004930113300005353Switchgrass RhizosphereMRVRFASRIVTRVFTLLVLTASLTINGRVSATLSGVFQESTGTLNDQPSSPRLLALR
Ga0070675_10063902833300005354Miscanthus RhizosphereMRVRFAFRIVTRVFTLLIMSASLATNVSATSSVTLGDQPSSPRLLALRDRLTSGDRTALDKFWKE
Ga0070703_1051386913300005406Corn, Switchgrass And Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALYQEKTGTLNDQLSSPRLLALRDRL
Ga0070705_10018195643300005440Corn, Switchgrass And Miscanthus RhizosphereMRVRYVSRIVTRVFTLLVMTASLTTNARVSATLSGVFQESTGTLNDQPSS
Ga0068867_10135748223300005459Miscanthus RhizosphereMLVSFASRIGTSVFTLLIMTASLATNVTVSATFPVPSSTRPQSISMPVERERTGSLNDQPSSPRLLALQNRLTSGDRTALDKFWKEISEQGAPIIEPVAGSD*
Ga0073909_1000189183300005526Surface SoilMRVRFASRIVTRVFSLLIMTASLATSIPILGALPVPSRTRPPHARMPVDQERTVSLNDQLSSPRLLALQDRLTAGDRTALDN
Ga0070679_10112821813300005530Corn RhizosphereMRVRYASRIVTRVFTLFVLTASLTTNVRVSATLRDLYQEKTGTLNDQPSSPRLLALRDRIASGDRTALDKFWKEISEQGAPIIEPVAGS
Ga0070679_10210274113300005530Corn RhizosphereMRVRYVSRIVTRVFTLLLMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFWKE
Ga0068853_10189753623300005539Corn RhizosphereMRVRYVSRIVTRVFTLLVMTASLTTNARLSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFWKEISEQ
Ga0070672_10049435533300005543Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKTGTLNDQPSSPRLLALRDRIASGDRTALD
Ga0070695_10006972033300005545Corn, Switchgrass And Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALYQEKTGTLNDQLSSPRLLALRDRLSSGDRTALAKFWKEISEQGAPLIEPVAGSDDMLVTML*
Ga0070695_10045267633300005545Corn, Switchgrass And Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKTGTLNDQPSSPRLLALRDRIASGDRTALNK
Ga0070695_10091649323300005545Corn, Switchgrass And Miscanthus RhizosphereMRVTFASRIVTRVFTLLLMTASLATNVLAQERTGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAPIIEP
Ga0070696_10075424113300005546Corn, Switchgrass And Miscanthus RhizosphereMRVSFASRIVTRVFTLLLMTASLATNVLAQERTGTLNDQP
Ga0070696_10181883323300005546Corn, Switchgrass And Miscanthus RhizosphereMRVRYVSRIVTRVFTLLVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRL
Ga0070693_10080189523300005547Corn, Switchgrass And Miscanthus RhizosphereMRVRYASRIATSVFTLLVMTASLTTTARVAATLSGGFQESTGTLNDQPSSPRLLSLRDRLKAGDRTALD
Ga0070704_10154771023300005549Corn, Switchgrass And Miscanthus RhizosphereMRVRYVSRIVTRVFTLLVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFWKEISEQGAPIIES
Ga0068854_10138270323300005578Corn RhizosphereMLDSFASRIGTSVFTLLIMTASLATNVTVSATFPVPSSTRPQSISMPVERERTGSLNDQPSSPRLLALQNRLTSGDRTALDKFWKEISEQGAPIIEPVAGSDDMLVTMLWR
Ga0068856_10025309513300005614Corn RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVVVSATFRALRQEKTGTL
Ga0068859_10099772523300005617Switchgrass RhizosphereMRVSIASRIVTRVFTLLVMTASLATNVTVSATLLVHHEKSGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQ
Ga0068864_10063145413300005618Switchgrass RhizosphereMRVRYAFRIVIRVFTLLVMTASLTTDVSVSATLSGVVQENILNDQPSSPRLLALRD
Ga0068864_10176541623300005618Switchgrass RhizosphereMRVRFAFRIVTRVFTLLIMSASLATNVSATSSVTLGDQPSSPRLLALRDRLTSGDRTALDKFWKEISEQ
Ga0068861_10048767533300005719Switchgrass RhizosphereMLVSFASRIVTSVFTLLIMTASLATNVTVNQETTGTLKDQPSSPRLLAL
Ga0068863_10210831123300005841Switchgrass RhizosphereMRVSFAFRIVTRVSTLLVMTASLAANGRITETLSVPSSTPSLSMSMPGDQDKSGTFDGQPTSPRLRNLRDRLTSGDRTALDKFWNEINE
Ga0068858_10041344513300005842Switchgrass RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVVVSATFRALRQEKTGTLNDQLSSPRLLALRDRLTSGDRTALDKF
Ga0068862_10192269413300005844Switchgrass RhizosphereMLVSFASRIVTRVFTLLFMTVSLATISMAVDQEKSGTLDDQPSSPRLLALQNRLTSGDRTALDKFWKE
Ga0066652_10062409233300006046SoilMRVRFASRIVTRVFTLLVMTASLAINVSVSAALRFLPQERSGTLNDQLSSPRLQALRERLNSGDR
Ga0075428_10200061123300006844Populus RhizosphereMRVRYASRIVTRVFTLLVMTASLTTNARVSATLSGVLQESTGTLNDQPSSPRLLV
Ga0075433_1032925643300006852Populus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALDQEKTGTLSDQLSSPRLLALRNRLASGDRSALDKFWKEISEQGAPIIEPVA
Ga0075425_10055286733300006854Populus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALYQEKTGTFNDQLSSPRLLALRDRLASGDRSALDKFWKEISEQGA
Ga0079219_1044180013300006954Agricultural SoilMLVSFASRIVTRVSTLLILTVSLAAIIMPVDQERTGTFNDQPSSPRLLALQDRLTSGDRTALDK
Ga0079219_1191743013300006954Agricultural SoilMRVSFASRIVTRVFTLLVMTASLAANVPVSATGTLDDQPSSPRLLALRDRLISGDRTAL
Ga0075419_1151807423300006969Populus RhizosphereMPVSTASRIVTRVFTLLIITASLATNVPVSALPVSSSTRPPSLSMPVDQERTGTSNDEPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAP
Ga0114129_1191167223300009147Populus RhizosphereMRVSLASRIVTRVFTLLVMIASLATNVLAQERTGTLNDQLSSPRLLALRARLTSGDPTALDKFWKEIKEQGTPIIEPAA
Ga0105243_1241195913300009148Miscanthus RhizosphereMRVTFASRIVTRVFTLLIITATLVTNVPVSAKLVDQEKSGTLIDQASSPRLLGLRDRLISGDRTALDKFWKEISEQG
Ga0105092_1060950313300009157Freshwater SedimentMLVSFASRIVTRVFTLLIMTASLATNVPVSATLPVPSSTRPPSISIPADQERTGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAPIIEPAAESDQVIVTMLW
Ga0075423_1158458513300009162Populus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALDQEKTGTLSDQLSS
Ga0105241_1183267613300009174Corn RhizosphereMRVRYVSRIVTRVFTLLVMTATLTTNARTFQESTGTVNDQPSSPRLLALRDRLTAGDRTALDKF
Ga0105242_1134231413300009176Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKPGTLNDQLSSPRLLA
Ga0105237_1089826013300009545Corn RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKTGTLNDEISSPRLLALRDRLTSGDRTALDKFWK
Ga0126372_1027606013300010360Tropical Forest SoilMRVRYASRIVTRVFTLLVMTASMTTNARVAATVSDVFEENAGTLNDQPSSPR
Ga0105239_1037841943300010375Corn RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALYQEKTGTLNDQLSSPRLLALRDRLASGDRSALDKFW
Ga0134124_1117925513300010397Terrestrial SoilMRVTFASRIVTRVFTLLIITSTLVTNVPVSAKLVDQEKSGTLIDQPSSPRLLGLRDRLISGDRT
Ga0134124_1305403413300010397Terrestrial SoilMRVRFVSRIVTRVFTLLVITAGLTNAPLSATLLDQESTRTLNDELSSPRLLALRDRITSGDRTALEKFWKEVSEQGAPIIESATDNDREVLVT
Ga0134127_1176467413300010399Terrestrial SoilVFTLLVLTASLTINGRVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTSGDRTALDQFWNEINEQGAPLIEPAAD
Ga0134122_1218076913300010400Terrestrial SoilMTASLTTNVCVSATLRALYQEKTGTLNDEISSPRLLALRDRLTSGDRAALDEFWKEISEQ
Ga0134123_1051954133300010403Terrestrial SoilMRVRFASRIVKRVFTLLVLTASLTINARVSATLSGGFQESTGTLNDQPASPRLLSLRDRLKAGDRTALDKFWKEIS
Ga0105246_1024816343300011119Miscanthus RhizosphereMTASLATNVTVSATLLVHHEKSGTLNDQPSSPRLLALRDRLTSGDRTALDKFWKEISEQGAPIIESATDNDRE
Ga0105246_1239208623300011119Miscanthus RhizosphereMIASLTTSVRVSATLRALNQEKTGTLNDQLSSPRLLALRDRLTSGDRTALDKFWKEISEQGAPIIDLLA
Ga0157296_1033785923300012905SoilMTASLATNVTVSATLLVHHEKSGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEINEQGAPIIEPAAD
Ga0164301_1016476733300012960SoilMRVRYASRIVTRVFTLFVMTASLTTNVRVSATLRALYQEKTGTLNDQLSSPRLLALRDRLTSGDRTALA
Ga0157371_1158203923300013102Corn RhizosphereMRAWYASRIVTRVFTLLVMTASLATNAPISATLRVLPQEKTGTLDDQLSSPRLL
Ga0157374_1287306713300013296Miscanthus RhizosphereMRVRYASRIVTRVFTLFVLTASLTTNVRVSATLRALYQENPGTLNDQLASPRLLAHKKLLRERS*
Ga0157378_1231463123300013297Miscanthus RhizosphereMRIRYASRIVTRVFTLFVMTASLTTNVGVSATLRALYQEKTGTLNDQLSSPRLLALRDRLTSGDRRALDKFWKEISEQGAPIIEPVAGSDD
Ga0163162_1049173513300013306Switchgrass RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKTGTLNDQPSSPRLLALRDRIASG
Ga0157372_1176691223300013307Corn RhizosphereMRVLYASRIVTRVFTLFVMTASLTTNVVVSATFRALRQEKTGTLNDQLSSPRLLALRDRLTSGDRTALDKFWKEIS
Ga0163163_1128839423300014325Switchgrass RhizosphereMRVRFAFRIVTRVSTLVVMTASLATNAPRSATLPALASRLSDPVSTRTLDDELASPRLLALRDRITSGDRTALDNFWK
Ga0157380_1248125423300014326Switchgrass RhizosphereMRVTFASRIVTRVFTLLIITATLVTNVPVSAKLVDQEKSGTLIDQASSPRLLGLRD
Ga0157379_1056721813300014968Switchgrass RhizosphereVFTLFVLTASLTTNVRLSATLRALYQEKTGTLNDQPSSPRLLALRDRIASGDRTALDKFWKEI
Ga0207653_1012039933300025885Corn, Switchgrass And Miscanthus RhizosphereMRVRYVSRIVTRVFTLLVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRT
Ga0207710_1026232313300025900Switchgrass RhizosphereMRVRFASRIVTRVFTLLIMTASLATNAPVSATSSVPSSMPVDQERTGTLDDQLSSPRLLALRDRLISGDRTALDKFWKEISEQGAPMIEPAAGSD
Ga0207671_1042079713300025914Corn RhizosphereMRVRYVSRIVTRVFTLLVMTATLTTNAHTFQESTGTVNDQPSSPRLLALRDRLTAGDRTALDKFWK
Ga0207652_1172477913300025921Corn RhizosphereMRVRYVSRIVTRVFTLLLMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFWNEINE
Ga0207681_1042410713300025923Switchgrass RhizosphereMRVRFASRIVTRVFTLLVLTASLTINGRVSATLSGVFQESTGTLNDQPSSPRLLALRNRL
Ga0207659_1044706213300025926Miscanthus RhizosphereMRVRYASRIVTRVFTLLVVTASLTTSARVSQEGTETLNDRPSSPRLLALQDWLTAGDRTALDKFWKEISEQG
Ga0207690_1141234013300025932Corn RhizosphereMRVTFASRIVTRVFTLLIITATLVTNVPVSAKLVDQEKSGTLIDQPSSPRLLGLRDRLIS
Ga0207706_1072224223300025933Corn RhizosphereMRVSFASRIVTRVFTLLLMTASLATNVLAQERTGTLNDQPSSPRLLALRDRLTSGDRTALDKF
Ga0207691_1033348333300025940Miscanthus RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVCVSATLRDLYQEKTGTLNDQPSSPRLLALRDRIASGDRTALNKFWKEISEQGAPIIEPVA
Ga0207711_1183503513300025941Switchgrass RhizosphereMRVRYASRIVIRVFTLLVMTASLTTDVSASATLSGVVQESTLNDQPSSPRLLALRDRLTSGDRTALDKFWKEISEQGAPIIEPAPDSD
Ga0207661_1197274223300025944Corn RhizosphereMRVSFAPRIVTRVFMLLVITATLAINVPASVVDQEKSGSLSDQPSSPRLLALRNRLISGDRTALDKFWKEIDEQGAPIIEPAADSDHE
Ga0207679_1126767413300025945Corn RhizosphereMRVSIASRIVTRVFTLLVMTASLATNVTVSATLLVHHEKSGTLNDQP
Ga0207712_1051187113300025961Switchgrass RhizosphereMLVSFASRIGTSVFTLLIMTASLATNVTVSATFPVPSSTRPQSISMPVERERTGSLNDQPSSPRLLALQNRLTSGDRTALDKFWKEISEQGAPIIEPVAGSDQDLLVTML
Ga0207640_1135142223300025981Corn RhizosphereMLDSFASRIGTSVFTLLIMTASLATNVTVSATFPVPSSTRPQSISMPVERERTGSLNDQPSSPRLLALQNRLTSGDRTALDKFWKEISEQGAPIIEP
Ga0207677_1043779113300026023Miscanthus RhizosphereMRVRYASRIVTRVFTLLVVTASLTTSARVSQEGTETLNDRPSSPRLLALQDWLTAGD
Ga0207703_1135859613300026035Switchgrass RhizosphereMRVRYASRIVTRVFTLFVMTASLTTNVVVSATFRALRQEKTGTLNDQLSSPRLLA
Ga0207639_1175440213300026041Corn RhizosphereMRVTFASRIVTRVFTLLIITATLVTNVPVSAKLVDQEKSGTLIDQPSSPRLLGLRDRLISGDRTALDKFWKEISEQGAPIIEAAEDSDHELLV
Ga0207708_1089511123300026075Corn, Switchgrass And Miscanthus RhizosphereMRVSFASRIVTRVFTLLVMTASLATNVTVSATLLVHHEKSGTLNDQPSSPRLLALRDRL
Ga0207648_1050910133300026089Miscanthus RhizosphereMRVRYVSRIVTRVFTLLVMTATLTTNARTFQESTGTVNDQPSSPRLLALRDRLTAGDRTALDKFWKEISEQGAPLIEPATD
Ga0207648_1125789223300026089Miscanthus RhizosphereMLVSFASRIGTSVFTLLIMTASLATNVTVSATFPVPSSTRPQSISMPVERERTGSLNDQPSSPRLLALQNRLTSGDRTALDKFWKEISEQGAPIIEPVAGSD
Ga0207676_1171220513300026095Switchgrass RhizosphereMLVSFASRIVTSVFTLLIMTASLATNVTVNQETTGTLKDQPSSPRLLALRD
Ga0207676_1215885923300026095Switchgrass RhizosphereMRVCNASRIVTRVFTLLVMTASLTTNARVFQESTGTLNDQPSSPRLLALRDRLTAGDRTALDKFWKEISEQ
Ga0207674_1070229813300026116Corn RhizosphereMRVRFAFRIVTRVSTLLVMTASLATNAPRSATLPALASRLSDPESTRTLDDELASPRLLALRDRITSGDRTALDNFWKEISEQGAPIIEPLAGSDIDLLVT
Ga0207674_1144502813300026116Corn RhizosphereMRVRYASRIITRVFTLLVMTVSLTINARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLTSGDRTALDKFWNEISEQGAPIIEPAA
Ga0207674_1182444223300026116Corn RhizosphereMLISFASRIVTRVFTLLIMAATLTTNISVTSADQERLTDQPSSPRLLALRDRLTSGDRTALDKFW
Ga0207698_1275787013300026142Corn RhizosphereMRVTFASRIVTRVFTLLIITATLVTNVPVSAKLVDQEKSGTLIDQASSPRLLGLRDRLISGDRTALDKFWKEISEQGAPIIEPAEDSDHEL
Ga0268265_1158359213300028380Switchgrass RhizosphereMRVRFAFRIVIRVSTLVVMTASLATNAPRSATLPVLASSMIDQETARTLDGELASPRLLALRDRITSGDRTALDNFWKEITEQGAPIIEPLAGSDSD
Ga0268241_1004407933300030511SoilMRVRYASRIVTRVFTLFVMTASLTTTSRALGQEKTGTLNDQPSS
Ga0307410_1052045823300031852RhizosphereMRVRFASRIVTRVFTLLLITSSLTTNVPVSATLRVYQDRAGTLNDQPSSPRLLALRDRLNSGDRTALDKFWNEINEQGAPIIEPAAESDHDLL
Ga0310884_1071004023300031944SoilMRVRFASRIVTRVFTLLVMTASLTTSVAISATLRALYQEKTGTLNDQLSSPRMQALRD
Ga0307409_10204652013300031995RhizosphereMRVRFASRIVTRVFTLLLITSSLTTNVPVSATLRVYQDRAGTLNDQPSSPRLLALRDRLNSGDRTALDKFWNEINEQGAPIIEPAAESD
Ga0307411_1116328113300032005RhizosphereMRAWYASRIVTRVFTLLVMTASLTTNARVSATLRGVFQEGTGTLNDQPSSPRLLALRDRLAAGDRTALDKFWKEISEEGAPIIEPATDNE
Ga0307415_10216884223300032126RhizosphereMRAWYVSRIATRVFTLLVMTASLTTNARVSATLSGVFQESTGTLNDQPSSPRLLALRDRLAA
Ga0310810_1039839213300033412SoilMLMSFASRIVTRVFTLLIATACLAANVPVPATMVDQRKSETLNDQPSSPRLLALRDRLTAGDR
Ga0334921_077763_3_3533300034220Hypolithic BiocrustMRVRYASRIVTRVFTLLIMTACLATNAPVSATLPIPSSTQARQVRMPVNQERTGTLNDQLSSPRLLALRDRLTSGDRTALDKFWKEISEQGAPIIEPAAGSDHDLLVTMLWRAREET

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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