Metagenome / Metatranscriptome Family F090027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	90 residues
Representative Sequence	MEGAMRQGVLIDEAIEVLFQLACDFGWSPGAGAVQEAWRALVGKAMDPLAQRGIGKGQRVRDGLQALVFDDFTHGLGPAKDPRLFRLFQEGI
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.10 %
% of genes near scaffold ends (potentially truncated)	30.56 %
% of genes from short scaffolds (< 2000 bps)	87.04 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.222 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.518 % of family members)
Environment Ontology (ENVO)	Unclassified (20.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13358	DDE_3	26.85
PF00072	Response_reg	0.93
PF08483	Obsolete Pfam Family	0.93
PF14319	Zn_Tnp_IS91	0.93
PF13614	AAA_31	0.93
PF13091	PLDc_2	0.93
PF03400	DDE_Tnp_IS1	0.93
PF05199	GMC_oxred_C	0.93
PF13975	gag-asp_proteas	0.93
PF13283	NfrA_C	0.93
PF00589	Phage_integrase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.93
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.52 %
Unclassified	root	N/A	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	93.52 %
Unclassified	root	N/A	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	93.52 %
Unclassified	root	N/A	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	93.52 %
Unclassified	root	N/A	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	93.52 %
Unclassified	root	N/A	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8855736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1342	Open in IMG/M
3300000550\|F24TB_10804406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	913	Open in IMG/M
3300000955\|JGI1027J12803_102440679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	674	Open in IMG/M
3300002558\|JGI25385J37094_10056751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1293	Open in IMG/M
3300005167\|Ga0066672_10920490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	540	Open in IMG/M
3300005171\|Ga0066677_10370763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	819	Open in IMG/M
3300005174\|Ga0066680_10486539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	777	Open in IMG/M
3300005178\|Ga0066688_10066694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2125	Open in IMG/M
3300005180\|Ga0066685_10187485	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005332\|Ga0066388_101269335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1266	Open in IMG/M
3300005332\|Ga0066388_107288513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	556	Open in IMG/M
3300005440\|Ga0070705_101499345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	565	Open in IMG/M
3300005441\|Ga0070700_100213769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1362	Open in IMG/M
3300005445\|Ga0070708_101196868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	711	Open in IMG/M
3300005447\|Ga0066689_10602243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	693	Open in IMG/M
3300005467\|Ga0070706_100389237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1298	Open in IMG/M
3300005471\|Ga0070698_101072008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	754	Open in IMG/M
3300005536\|Ga0070697_101045978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	726	Open in IMG/M
3300005549\|Ga0070704_100048161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2982	Open in IMG/M
3300005586\|Ga0066691_10935902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	509	Open in IMG/M
3300005764\|Ga0066903_103491365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	847	Open in IMG/M
3300005764\|Ga0066903_108378647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	528	Open in IMG/M
3300006845\|Ga0075421_102688254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	515	Open in IMG/M
3300006847\|Ga0075431_100270692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1721	Open in IMG/M
3300007076\|Ga0075435_100475482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1079	Open in IMG/M
3300007255\|Ga0099791_10067347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1620	Open in IMG/M
3300007258\|Ga0099793_10073181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1552	Open in IMG/M
3300009089\|Ga0099828_11909382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	521	Open in IMG/M
3300009094\|Ga0111539_10109082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	3248	Open in IMG/M
3300009094\|Ga0111539_10471933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1461	Open in IMG/M
3300009100\|Ga0075418_10055952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	4219	Open in IMG/M
3300009100\|Ga0075418_10261127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1845	Open in IMG/M
3300009100\|Ga0075418_11117609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	853	Open in IMG/M
3300009100\|Ga0075418_11445630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	746	Open in IMG/M
3300009100\|Ga0075418_12989545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	515	Open in IMG/M
3300009137\|Ga0066709_101588243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	937	Open in IMG/M
3300009137\|Ga0066709_103790207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	549	Open in IMG/M
3300009147\|Ga0114129_10129725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	3464	Open in IMG/M
3300009147\|Ga0114129_10154977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	3133	Open in IMG/M
3300009147\|Ga0114129_10431986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1730	Open in IMG/M
3300009147\|Ga0114129_13410596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	511	Open in IMG/M
3300009156\|Ga0111538_10045890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	5610	Open in IMG/M
3300009156\|Ga0111538_11827576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	765	Open in IMG/M
3300009156\|Ga0111538_12605361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	634	Open in IMG/M
3300009162\|Ga0075423_10572067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1190	Open in IMG/M
3300009691\|Ga0114944_1040944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1675	Open in IMG/M
3300009792\|Ga0126374_10159237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1379	Open in IMG/M
3300009792\|Ga0126374_10169947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1346	Open in IMG/M
3300009792\|Ga0126374_11568059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	543	Open in IMG/M
3300010038\|Ga0126315_10148038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1388	Open in IMG/M
3300010046\|Ga0126384_10387576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1176	Open in IMG/M
3300010047\|Ga0126382_10236085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1329	Open in IMG/M
3300010047\|Ga0126382_11954263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	557	Open in IMG/M
3300010304\|Ga0134088_10410979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	661	Open in IMG/M
3300010359\|Ga0126376_10139278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1925	Open in IMG/M
3300010359\|Ga0126376_10153229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1849	Open in IMG/M
3300010359\|Ga0126376_10392496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1247	Open in IMG/M
3300010360\|Ga0126372_11699859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	672	Open in IMG/M
3300010361\|Ga0126378_11471315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	772	Open in IMG/M
3300010362\|Ga0126377_10624969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1124	Open in IMG/M
3300010398\|Ga0126383_10481466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1296	Open in IMG/M
3300010398\|Ga0126383_12166080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	643	Open in IMG/M
3300011270\|Ga0137391_11255107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	588	Open in IMG/M
3300012022\|Ga0120191_10076805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	643	Open in IMG/M
3300012189\|Ga0137388_10510218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1117	Open in IMG/M
3300012198\|Ga0137364_10156483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1651	Open in IMG/M
3300012201\|Ga0137365_10530443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	864	Open in IMG/M
3300012203\|Ga0137399_10210173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1583	Open in IMG/M
3300012206\|Ga0137380_10997316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	716	Open in IMG/M
3300012207\|Ga0137381_11539925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	556	Open in IMG/M
3300012209\|Ga0137379_11578208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	555	Open in IMG/M
3300012210\|Ga0137378_11059991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	725	Open in IMG/M
3300012351\|Ga0137386_10210268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1397	Open in IMG/M
3300012354\|Ga0137366_10299796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1183	Open in IMG/M
3300012356\|Ga0137371_10025577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4543	Open in IMG/M
3300012903\|Ga0157289_10279405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	581	Open in IMG/M
3300012948\|Ga0126375_10633244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	822	Open in IMG/M
3300012971\|Ga0126369_11613202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	738	Open in IMG/M
3300012977\|Ga0134087_10213756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	869	Open in IMG/M
3300015371\|Ga0132258_11818112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1535	Open in IMG/M
3300015371\|Ga0132258_13886942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1016	Open in IMG/M
3300015373\|Ga0132257_102560112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	663	Open in IMG/M
3300016357\|Ga0182032_11923797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	518	Open in IMG/M
3300019878\|Ga0193715_1081342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	672	Open in IMG/M
3300025149\|Ga0209827_10756595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2193	Open in IMG/M
3300025939\|Ga0207665_10345049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1123	Open in IMG/M
3300026035\|Ga0207703_10675791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	981	Open in IMG/M
3300026310\|Ga0209239_1097097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1255	Open in IMG/M
3300027655\|Ga0209388_1020604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1845	Open in IMG/M
3300027748\|Ga0209689_1064557	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300027873\|Ga0209814_10030569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2216	Open in IMG/M
3300027909\|Ga0209382_11170327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	789	Open in IMG/M
3300028596\|Ga0247821_10159887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1310	Open in IMG/M
3300031114\|Ga0308187_10223129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	671	Open in IMG/M
3300031547\|Ga0310887_10072608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1622	Open in IMG/M
3300031820\|Ga0307473_10412537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	888	Open in IMG/M
3300031847\|Ga0310907_10058094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1530	Open in IMG/M
3300031854\|Ga0310904_10515191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	804	Open in IMG/M
3300031890\|Ga0306925_11947949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	557	Open in IMG/M
3300031954\|Ga0306926_12344530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	590	Open in IMG/M
3300034665\|Ga0314787_078983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	583	Open in IMG/M
3300034667\|Ga0314792_001381	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300034668\|Ga0314793_070889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	678	Open in IMG/M
3300034673\|Ga0314798_093915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	626	Open in IMG/M
3300034677\|Ga0314802_044999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.93%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.52%
Loam	Environmental → Terrestrial → Soil → Loam	12.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034677	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00567340	2088090015	Soil	MDGAVLKRVLIDEALEVLFQLARDFRGSPRTWAVDEAWRALVGKAMDPLAQSGISKRQCVGDGLEALAFDNFAHGLGTAEDPSLFGLFQESV
F24TB_108044061	3300000550	Soil	VVQRVVIDEAIEVLVQRARDLGRSARAGAVHEAWRPLVGTTMDPRAQRGIGKVPCIRDPLETLAFDDFTHGLGTAKEPRLFRLFQ
JGI1027J12803_1024406791	3300000955	Soil	MDGAVLKRVLIDEALEVLFQLARDFRGSPRTWAVDEAWRALVGKAMDPLAQSGISKRQCVGDGLEALAFDNFAHGLGTAEDPSLFGLF
JGI25385J37094_100567512	3300002558	Grasslands Soil	LGLEGAVRQGVLLDEALEMLFQRARDFRRSTGAGVVHEAWRALVGKAMHPLAQRGIGKGQRVRDGLEALAFDDFPHRLGPAKDPSLFRLFHEGI*
Ga0066672_109204901	3300005167	Soil	VRQGVLLDEALEMLFQRARDFRRSTGAGVVHEAWRALVGKAMHPLAQRGIGKGQRVRDGLEALAFDDFPHRLGPAKDPSLFRLF
Ga0066677_103707632	3300005171	Soil	VLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAI*
Ga0066680_104865392	3300005174	Soil	MERAVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVRETMDPLAQGGIGKVQRVGDRLEALSFDDLAYGLGTAKDTSLFRLFHE
Ga0066688_100666942	3300005178	Soil	VLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAVLSL*
Ga0066685_101874853	3300005180	Soil	MEGAVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAVLSL*
Ga0066388_1012693352	3300005332	Tropical Forest Soil	VFQRVLINQAIEVLFQLARDFGWATGARAVHQARHPLIGKAVDPFAEGRIRKLERVGDGLEPLAFDDLAHGLGTAKDPRLFRLFQEDI*
Ga0066388_1072885132	3300005332	Tropical Forest Soil	MERTVLQGVVIDQAIEVLFQLARDFGRSTRARAIHEAMDPLVGQAVDPLAEGGIGEVQRIRDRLETLALNDIAHGLGTAKDPGFFRLF*
Ga0070705_1014993451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GYDSRQLVTTPWGMEGAVLQGGVIDQAMEVLVQRTCDLRRSTGAGVVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL*
Ga0070700_1002137691	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAVVQRVLIDEAIEVLFQLARDLGRSARAGAVHEAWRTLVGTTMDPLAQRGIGKVQCIRDPLETLAFDDFTHGLGTAKDPRLF
Ga0070708_1011968682	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEGAVLQGVVINEAIEVLFQLTSDFGRSTRARAVDEAWRALVGKAMDPLAQRGIGKGQRVRDGLETLAFDDFTHRLGPAKDARLFRLFQEAISGG
Ga0066689_106022432	3300005447	Soil	MERAVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAI*
Ga0070706_1003892371	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLQGGVIDQAMEVLVQRTCDLRRSTGAGAVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL*
Ga0070698_1010720082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLQGGVIDQAMEVLVQRTCDLRRSTGAGVVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL*
Ga0070697_1010459781	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LDTGLLCSDGGECATTPLGGEGALLQGVLVDEAIEVLFQRAGDFWRSTGAWAVNEAVRALVGKAMDPLAQSGIGKGQRVGDSLEALAFDDVVHRLGTAEDARLFGLLQEGV*
Ga0070704_1000481613	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAVVQRVLIDEAIEVLFQLARDLGRSARAGAVHEAWRTLVGKTMDPLAQRGIGKVQCIRDPLETLAFDDFTHGLGTAKDPRLFRLFQEGI*
Ga0066691_109359022	3300005586	Soil	VLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPLAQRGIGKGQRIRDRLEALAFDDVAHRLDTAED
Ga0066903_1034913652	3300005764	Tropical Forest Soil	MLQGVLIDEAIEVLFQRAGDFGWSPGAGTVQEAWPALVGKAMDPLAQRGIGKGQRVRDGLQTLAFDDFTHGLGPAKDPRLFRLFQEGI*
Ga0066903_1083786471	3300005764	Tropical Forest Soil	MLQGVLIDEAIEVVLQLARHFGRSTRAGAIHQAWRALVGKALDPLAQRGIGKGQRVRDGLEALAFDDFTHGLG
Ga0075421_1026882542	3300006845	Populus Rhizosphere	GMEGTVLQGVLIDEAIEVLFQLACDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDGLEALTFDDFPHRLGAAKDPSLFRLFQEDI*
Ga0075431_1002706922	3300006847	Populus Rhizosphere	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS*
Ga0075435_1004754822	3300007076	Populus Rhizosphere	MKRAVVQRVLIDEAIEVLFQLARDLGRSARAGAVHEAWRTLVGTTMDPLAQRGIGKVQCIRDPLETLAFDDFTHGLGTAKDPRLFRLFQEGI*
Ga0099791_100673471	3300007255	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLARDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDSLEALAFDDFTHRLGTAKDPSLFRLFQEDI*
Ga0099793_100731812	3300007258	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLARDFRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDSLEALAFDDFTHRLGTAKDPSLFRLFQEDI*
Ga0099828_119093821	3300009089	Vadose Zone Soil	LIDEAIEVLFQLARDLGRSTGAWAVDEALRALVGKAMDSLAQGGIGKVQRVGDGLEALAFDDVAHSLGTAEDARLFGLFQEGV*
Ga0111539_101090822	3300009094	Populus Rhizosphere	LGREGAVLQGVLINEALEVLFQRTGDFGRSTRAWAVDEAWRALVGKAMDPLAQRGIGKGQGVGDGLEALAFDHVAHGLGTAEDASLFGLFQEGV*
Ga0111539_104719332	3300009094	Populus Rhizosphere	MEGALLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS*
Ga0075418_100559524	3300009100	Populus Rhizosphere	LINEALEVLFQRTGDCGRSTRAWAVDEAWRALVGKAMDPLAQRGIGKGQGVGDGLEALAFDHVAHGLGTAEDASLFGLFQEGV*
Ga0075418_102611271	3300009100	Populus Rhizosphere	MEGTVLQGVLIDEAIEVLFQLACDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDGLEALTFDDFPHRLGAAKDPSLFRLFQEDI*
Ga0075418_111176091	3300009100	Populus Rhizosphere	MEGAVLQGVLIDEAIEVLFQLARDFGRSTGAGAVNEALRALVGKAMDPLAQRGIGKVQRVRDCLEALAFDDFTHRLDTTKDTSLFRLFQEGIYGGQGVIGKTQFESPHRGA
Ga0075418_114456301	3300009100	Populus Rhizosphere	MLQGVVLDEPIEVLFQLAGKLGRSPGARAIHQPPRALVRKAMAPLAQGGIGKVQRIGDGLEALAFDDLAHGLGTAKDTSLCGLFQESV*
Ga0075418_129895451	3300009100	Populus Rhizosphere	QGVLINEAIEMPFQCTRHLGRSTGTGTIEQASGALIGKAMDPLAAGGIGKVQRVGVRLEALSFDDLAHGLGTAKDTRLFRLFHAGI*
Ga0066709_1015882432	3300009137	Grasslands Soil	MEGAVLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPLAQRGIGKGQRVGDGLEALAFDDVAHGLGTTEDPGFLGLFEKGL*
Ga0066709_1037902071	3300009137	Grasslands Soil	AVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVRETMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAI*
Ga0114129_101297252	3300009147	Populus Rhizosphere	MLQGVVLDEPIEVLFQLAGELGRSPGARAIHQPPRALVRKAMAPLAQGGIGKVQRIGDGLEALAFDDLAHGLGTAKDTSLCGLFQESV*
Ga0114129_101549772	3300009147	Populus Rhizosphere	MERAVLQGVLLDQALEVLFQLTGDCRRSPGAGVVHEAWRAVVGKAMDPLTEGGIGKGQRVRDGLEALAFDDFTHGLGPAKDSRRFRLFHEGI*
Ga0114129_104319862	3300009147	Populus Rhizosphere	MEGAVLQGGVIDQAMEVLVQRTCDLRRSTGAGAVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL*
Ga0114129_134105961	3300009147	Populus Rhizosphere	MEGTVLQGVLIDEAIEVLFQLACDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDGLEALTFDDFPHRLGAAKDPSLCRLFQDDI*
Ga0111538_100458903	3300009156	Populus Rhizosphere	LGREGAVLQGVLINEALEVLFQRTGDCGRSTRAWAVDEAWRALVGKAMDPLAQRGIGKGQGVGDGLEALAFDHVAHGLGTAEDASLFGLFQEGV*
Ga0111538_118275761	3300009156	Populus Rhizosphere	VLQGGVIDQAMEVLVQRTCDLRRSTGAGVVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKA
Ga0111538_126053611	3300009156	Populus Rhizosphere	MKRAVVQRVVIDEAIAVLVQRARDLGRSARAGAVHEAWRPLVGTTMDPRAQRGIGKVPCIRDPLETLAFDDFTHGLGTAKDPRLFRLFQEGI*
Ga0075423_105720672	3300009162	Populus Rhizosphere	AAELDPGFTGYDGRQLVTTPWGMEGAVLQGGVIDQAMEVLVQRTCDLRRSTGAGAVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL*
Ga0114944_10409441	3300009691	Thermal Springs	LGEHSGECATTPLGIEGAVLEGVLIDQAIEVLCQLARDLRRSTGARAVHQPRCPLVGKAMDPLAQRGIGKVQRVRDRLEALPFDDFAHRLGTAEDPSLCGLFQEGV*
Ga0126374_101592372	3300009792	Tropical Forest Soil	MEGAVFQRVLINQAIEVLFQLARDFGWATGARAVHQARHPLIGKAVDPFAEGRIRKLERVGDGLEPLAFDDLAHGLGTAKDPRLFRLFQEDI*
Ga0126374_101699472	3300009792	Tropical Forest Soil	MEGAMRQGVLIDEAIEVLFQLACDFGWSPGAGAVQEAWRALVGKAMDPLAQRGIGKGQRVRDGLQALVFDDFTHGLGPAKDPRLFRLFQEGI*
Ga0126374_115680591	3300009792	Tropical Forest Soil	MEGAVLQGVLLDQALEVLFQLARHLGRSPGAGAVHEAVRTLVGKTMDPLAQRGIGKVQCIRDRLETLAFDNFTHGLGTAKDPRLFRLFQEGI*
Ga0126315_101480382	3300010038	Serpentine Soil	MLEGVLINQAIEVLFQLARNFGRSTGARAVHQARHPLIGKAVDPFAEGRIRKLERVRDGLEPLAFDDLAHGLGTAKDPRLFRLFQEDI*
Ga0126384_103875761	3300010046	Tropical Forest Soil	MEGAVLQGVLLDQALEVLFQLARHLGRSPGAGAVHEAVRTLVGKTMDPLAQRGIGKVQCIRDRLETLAFDNFTHGLGTAKDPRLFRLFHEGI*
Ga0126382_102360852	3300010047	Tropical Forest Soil	MEGAVLQGVLLDQALEVWFQLARHLGRSPGAGAVHEAVRTLVGKTMDPLAQRGIGKVQCIRDRLETLAFDNFTHGLGTAKDPRLFRLLHEGI*
Ga0126382_119542632	3300010047	Tropical Forest Soil	RIQGAMLQGVLIDELIEVLFQLTGELGRSTGARAIHQPPRALVRKAMDPLAQGGIGKVQRIGDGLEALAFDDLAHGLGTAKDTSLCGLFQESV*
Ga0134088_104109791	3300010304	Grasslands Soil	MEGAVLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPLAQRGIGKGQRVGDGLEALAFDDVAHGLGTTEDTGFLGLFEKGL*
Ga0126376_101392782	3300010359	Tropical Forest Soil	MERAVLQGVLIDEALEVLFQLARDFGRPTGAGAIDEALGALGGKAMDPLAERGIGKGQRIRDGLEALAFDDFTHGLGPAKDPCLFRLLHKGL*
Ga0126376_101532291	3300010359	Tropical Forest Soil	MKRAVFQRVLIDEAIEVLFQLARDLGRSPRAWAVNEALRPLVGKAMDPLAQRGIGKVQGVRDRLEALAFDDFTHGLGTAEDASLFSLFQEGV*
Ga0126376_103924961	3300010359	Tropical Forest Soil	MEMLCQRTGKFGRSTRARAVDEAWRALVGKAMDPCAQGRIGKLEGVGNRLEALPFDDVAHGLSTAEDARFLGLLDEGISGRERVLGKV*
Ga0126372_116998591	3300010360	Tropical Forest Soil	MEGAVLQGGLIHEAMEVLFQLARDFGRPTGAGTINEAWRTLVGKAMDPLAQRGIGKGKRVGDGLQALAFDDFPHGLGTAKDPCLFGLVQEGG*
Ga0126378_114713151	3300010361	Tropical Forest Soil	MEGAMRQGVLIDEAIEVLFQLACDFGWSPGAGAVQEAWRALVGKAMDPLAQRGIGKGQRVRDGLQALVFDDFTHGLGPAKDPRLFRLFHEGL*
Ga0126377_106249691	3300010362	Tropical Forest Soil	MKRAVFQRVLIDEAIEVLFQLARDLGRSPRAWAVNEALRPLVGKAMDPLAQRGIGKVQCVRDRLEALAFDDFTHGLGTAEDASLFRLFQEGV*
Ga0126383_104814662	3300010398	Tropical Forest Soil	MEGAVLQGVLLDQALEVLFQLARHLGRSPGAGAVHEALRTLVGKTMDPLAQRGIGKVQCIRDRLETLAFDNFTHGLGTAKDPRLFRLFHEGI*
Ga0126383_119515981	3300010398	Tropical Forest Soil	MEMLCQRTGKFGRSTRARAVDEAWRALVGKAMDPLAQRRIGKGQRVGDGLEALAFDNVTHRLGTAEDASLFGLFQEGV*
Ga0126383_121660801	3300010398	Tropical Forest Soil	MLAGVLIDQAIEVLCQLARDFGRSTGTRAIPQPLGARLGKALHPLAPRGIGKGQWVRDGLEALAFDDFAHRLGTAEDTGFFCLFQEGF*
Ga0137391_112551072	3300011270	Vadose Zone Soil	LKRVLINEAIEVLFQLARDFRRSTGAWAVDEALRALVGKAMDPLTQRGIGKVQCVGDGLEALAFDDFAHGLGTAEDTRLFGLLQESV*
Ga0120191_100768051	3300012022	Terrestrial	VLKGVLIDETIEMLFSLPGEFRGATRARTIHQSQRAVVGKAMDPLAQRGIGKLEGVGDGLEALAFDHVAPGLGTPEDTSF
Ga0137388_105102181	3300012189	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLARDFGRSTGAWAINEALRALVGKAMDPLAQGGIGKVQRVGHRLEALAFDDVAHRLGTAEDASLFGLFQEGV*
Ga0137364_101564832	3300012198	Vadose Zone Soil	MEGAVLQGVLIDQAMEVLFQLTCDLTRSTGAGVVHEAWRALVGKAMDPLTERRIGKGQRVRDGLEALAFDDFTHGLGPAKDPSLFRLFQEGI*
Ga0137383_100734842	3300012199	Vadose Zone Soil	MDPGLASEDGSKFLTTPLGLVGAVLERVLVNEVIEVVRERAGHFGWATRAGVVGEALHPLGGKTMYPFAQRGIGKVQRVRDGLEALPFDDVTHSLSTAEDARLFGLFQEGV*
Ga0137383_106285381	3300012199	Vadose Zone Soil	LGRAGAVLEGVLVDEPIEVVGQLAGHFGRATGARAIHQALDPLVGEAMDPLAQRRIGKVQRVGDGLEALPFDDVAHSLGTAEDASLFGLFQKGI*
Ga0137365_105304431	3300012201	Vadose Zone Soil	MEGAVLQRVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAI*
Ga0137399_102101733	3300012203	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLARDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDSLEALAFDDFTHRLGTAKDPSLFRLFQEDL*
Ga0137380_109973162	3300012206	Vadose Zone Soil	AVLKRVLIDEAIEVLFQLARDFRRSTRAWAVGEALRALVGKAMDPLAQSGIGKRQCVGDGLEALVFDDFAHGLGTAEDTSLFGLFQKRV*
Ga0137381_115399251	3300012207	Vadose Zone Soil	PLGMEGAMLQRVLIDEAIEVLFQLARDFRRSTRAWAVGEALRALVGKAMDPLAQRGIGKGQRLRDRLEALAFDDVAHRLGTAEDARFFRLFQEGI*
Ga0137379_115782081	3300012209	Vadose Zone Soil	GRKFATIPLGMDGAILQGVLINETIEVSCQFTGHFGRSPGAWAVNEAWRALLGKAMDPLAQSGIGKRQCVGDGLEALVFDDFAHGLGTAEDTSLFGLFQKRV*
Ga0137378_110599911	3300012210	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALSFDDLAHGL
Ga0137386_102102681	3300012351	Vadose Zone Soil	MEGAVLQGVVINEAIEVLFQLTSDCGRSTRARAVDEALRALVGKAMDPLAQSGIGQGQGVGDGLEALAFDDFTHGLGPAKDPSLFCLFQEGI*
Ga0137366_102997962	3300012354	Vadose Zone Soil	MVGAVLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPLAQRGIGKGQRVGDGLEALAFDDVAHGLGTTEDPGFLGLFEKGL*
Ga0137371_100255774	3300012356	Vadose Zone Soil	MEGAVLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPFAQRGIGKGQRVGDGLEALAFDDVAHGLGTTEDPGFLGLFEKGL*
Ga0157289_102794051	3300012903	Soil	MEGAVLQGVLIDQAMEVLFQLTGDFRRSTRAGVVHEAWRALVGKAMDPLTERRIGKGQRVRDGLEALAFDDFTHGL
Ga0126375_106332442	3300012948	Tropical Forest Soil	VLEGVLIDEAIEVLFQRARDFRWSPGAGVVHEAWRALVGKAMDPLAQGGVGKVQRVRDGLQTLTLHDVAYGLGTAKHASCFGLL*
Ga0126369_116132022	3300012971	Tropical Forest Soil	MEGAMLQGVLIDEAIEVLFQRAGDFGWSPGAGTVQEAWPALVGKAMDPLAQRGIGKGQRVRDGLQTLAFDDFTHGLGPAKDPRLFRLFQEGI*
Ga0134087_102137562	3300012977	Grasslands Soil	MEGAVLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVREAMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEDI*
Ga0132258_118181122	3300015371	Arabidopsis Rhizosphere	MEGAVFQRVLINQAIEVLFQLARDFGWSTGARAVHQARHPLIGKAVDPFAEGRIGQLERVGDGLEPLAFDDLAHGLGTAKAPRLFRLFQEDI*
Ga0132258_138869421	3300015371	Arabidopsis Rhizosphere	MEGAMLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS*
Ga0132257_1025601121	3300015373	Arabidopsis Rhizosphere	MEGAMLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGI*
Ga0182032_119237971	3300016357	Soil	VLKGVLIDETIEMLFSLTGEFGGAARARTIHQSPRALVGKAMDPLAQRGIGKLEGVGDGLEALAFDNVAHGLGTPE
Ga0193715_10813421	3300019878	Soil	VLQGVLINEAIEVLFQRTGDCGRSTRARAVDEALRALVGKAMDPLPQSGIGKGQRVGDGLEALAFDDVAHRLGTAEDASLF
Ga0209827_107565952	3300025149	Thermal Springs	VLEGVLIDQAIAVLCQLARDLRRSTGARAVHQPRCPLVGKAMDPLAQRGIGKVQRVRDRLEALPFDDFAHRLGTAEDPSLCGLFQEGV
Ga0207665_103450491	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLQGGVIDQAMEVLVQRTCDLRRSTGAGVVSEAWRAWVGKAMDPLTERSIGKGQRVRDGLEALAFDDCTHGLGPAKAPSLFRLFQEGL
Ga0207703_106757911	3300026035	Switchgrass Rhizosphere	MGQGVLIDEAIEVHGECTGHFERSTGARAVDEALATFIGKAMDPFAQCGIGKVQCVGDGLETVPCDDVAHGLGTAADARLCSLF
Ga0209239_10970972	3300026310	Grasslands Soil	MEGAVLQGVLIDEAIEVLFQLTGDFGRSTRARAVDEALRALVGKAMDPLAQRGIGKGQRVGDGLEALAFDDVAHRLGTAEDASFF
Ga0209388_10206042	3300027655	Vadose Zone Soil	VLQGVLIDEAIEVLFQLARDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDSLEALAFDDFTHRLGTAKDPSLFRLFQEDI
Ga0209689_10645573	3300027748	Soil	VLQGVLIDEAIEVLFQLARDFRGSTGAGAISQALDTLVRETMDPLAQGGIGKVQRVGDRLEALAFDDLAHGLGTAKDPRLFRLFQEAVLSL
Ga0209814_100305693	3300027873	Populus Rhizosphere	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLEALTFDDFPHRLGAAKDPSLCRLFQDDI
Ga0209382_111703272	3300027909	Populus Rhizosphere	VLQGVLIDEAIEVLFQLACDLRRSTGTGVVHEALRTLMAKAMDPLAQRGIGKGQRVRDGLEALTFDDFPHRLGAAKDPSLFRLFQEDI
Ga0247821_101598871	3300028596	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQE
Ga0308187_102231292	3300031114	Soil	VLQGVVIGEALEVLFQLTRDFGRSPGAWAVHEALRALVGKAMDPLPQSGIGKGQRVGDGLEALAFDDVAHRLGTAEDAS
Ga0310887_100726081	3300031547	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLF
Ga0307473_104125371	3300031820	Hardwood Forest Soil	MLQGVLIDEAIEVLFQRARDFGWSPGAGTVQEAWPALVGKAMDPLAQRGIGKGQRVRDGLQTLAFDDFTHGLGPAKDPRLFRLFQEGI
Ga0310907_100580942	3300031847	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGQGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS
Ga0310904_105151912	3300031854	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS
Ga0306925_119479491	3300031890	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALVGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS
Ga0306926_123445301	3300031954	Soil	MLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAGRALVGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS
Ga0314787_078983_178_456	3300034665	Soil	MEGALLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFRLFQEGS
Ga0314792_001381_1911_2162	3300034667	Soil	LINEALEVLFQRTGDCGRSTRAWAVDEAWRALVGKAMDPLAQRGIGKGQGVGDGLEALAFDHVAHGLGTAEDASLFGLFQEGV
Ga0314793_070889_306_572	3300034668	Soil	MLQGVLLDKALEVLFQRARDFGRPTRAGAVHEARRALVSKAMDPFAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRLFGLFQEDV
Ga0314798_093915_369_620	3300034673	Soil	LLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFTHGLGPAKDPRFFRLFQEGS
Ga0314802_044999_207_485	3300034677	Soil	MEGAMLQGVLLDKALEVLFQRARDFGGAPGAGAVQEAWRALMGKAMDPLAQRGIGKGQRVRDGLQALAFDDFSHGLGPAKDPRLFRLFQEGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences