Metagenome Family F090024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090024
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESLPQR
Number of Associated Samples	80
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.51 %
% of genes near scaffold ends (potentially truncated)	60.19 %
% of genes from short scaffolds (< 2000 bps)	81.48 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.111 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.71% β-sheet: 0.00% Coil/Unstructured: 44.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08867	FRG	3.70
PF01011	PQQ	1.85
PF00589	Phage_integrase	1.85
PF00940	RNA_pol	1.85
PF04519	Bactofilin	1.85
PF04454	Linocin_M18	0.93
PF01381	HTH_3	0.93
PF09537	DUF2383	0.93
PF04392	ABC_sub_bind	0.93
PF13546	DDE_5	0.93
PF02371	Transposase_20	0.93
PF13365	Trypsin_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.85
COG5108	Mitochondrial DNA-directed RNA polymerase	Transcription [K]	1.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
All Organisms	root	All Organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
cellular organisms	root	All Organisms → cellular organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.19 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.78 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.78 %
Bradyrhizobium sp. Rc2d	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	1.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1031222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10016112	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10033957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1188	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1030163	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300000956\|JGI10216J12902_106451609	Not Available	510	Open in IMG/M
3300004633\|Ga0066395_10168754	Not Available	1123	Open in IMG/M
3300005167\|Ga0066672_10206545	Not Available	1253	Open in IMG/M
3300005181\|Ga0066678_10183930	Not Available	1327	Open in IMG/M
3300005332\|Ga0066388_100418190	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300005332\|Ga0066388_102127968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300005332\|Ga0066388_102373470	Not Available	961	Open in IMG/M
3300005332\|Ga0066388_106429857	Not Available	592	Open in IMG/M
3300005332\|Ga0066388_107243487	Not Available	557	Open in IMG/M
3300005445\|Ga0070708_100088535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2815	Open in IMG/M
3300005467\|Ga0070706_101891335	Not Available	541	Open in IMG/M
3300005471\|Ga0070698_101474975	Not Available	631	Open in IMG/M
3300005518\|Ga0070699_100317138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300005518\|Ga0070699_101316893	Not Available	662	Open in IMG/M
3300005536\|Ga0070697_100757066	Not Available	858	Open in IMG/M
3300005713\|Ga0066905_100368863	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300005713\|Ga0066905_100557111	Not Available	963	Open in IMG/M
3300005713\|Ga0066905_101222642	Not Available	672	Open in IMG/M
3300005713\|Ga0066905_101290422	Not Available	656	Open in IMG/M
3300005713\|Ga0066905_101349597	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_100288589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2581	Open in IMG/M
3300005764\|Ga0066903_102244267	Not Available	1053	Open in IMG/M
3300005764\|Ga0066903_105491835	Not Available	668	Open in IMG/M
3300005764\|Ga0066903_108944321	Not Available	507	Open in IMG/M
3300006847\|Ga0075431_100410333	Not Available	1355	Open in IMG/M
3300007076\|Ga0075435_100965749	Not Available	744	Open in IMG/M
3300009100\|Ga0075418_11001140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300009147\|Ga0114129_10437368	Not Available	1718	Open in IMG/M
3300009553\|Ga0105249_12609361	Not Available	577	Open in IMG/M
3300009792\|Ga0126374_10623883	Not Available	799	Open in IMG/M
3300010043\|Ga0126380_10153685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300010046\|Ga0126384_10150955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1788	Open in IMG/M
3300010048\|Ga0126373_10241234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1774	Open in IMG/M
3300010048\|Ga0126373_12220072	Not Available	610	Open in IMG/M
3300010301\|Ga0134070_10285609	Not Available	626	Open in IMG/M
3300010333\|Ga0134080_10152605	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	980	Open in IMG/M
3300010358\|Ga0126370_10747938	Not Available	865	Open in IMG/M
3300010360\|Ga0126372_11451702	Not Available	720	Open in IMG/M
3300010360\|Ga0126372_11509218	Not Available	708	Open in IMG/M
3300010361\|Ga0126378_13458280	Not Available	501	Open in IMG/M
3300010362\|Ga0126377_12952984	Not Available	549	Open in IMG/M
3300010366\|Ga0126379_10681511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300010376\|Ga0126381_101779589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300010376\|Ga0126381_103086186	Not Available	660	Open in IMG/M
3300010376\|Ga0126381_103330479	Not Available	633	Open in IMG/M
3300010376\|Ga0126381_103369539	Not Available	629	Open in IMG/M
3300010398\|Ga0126383_11133993	Not Available	872	Open in IMG/M
3300010868\|Ga0124844_1264286	Not Available	597	Open in IMG/M
3300012208\|Ga0137376_10161534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1930	Open in IMG/M
3300012357\|Ga0137384_11424671	Not Available	541	Open in IMG/M
3300012362\|Ga0137361_10816157	Not Available	848	Open in IMG/M
3300012971\|Ga0126369_10797388	Not Available	1027	Open in IMG/M
3300012971\|Ga0126369_11164166	Not Available	861	Open in IMG/M
3300013500\|Ga0120195_1032801	Not Available	530	Open in IMG/M
3300016319\|Ga0182033_10010333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5238	Open in IMG/M
3300016371\|Ga0182034_11533965	Not Available	584	Open in IMG/M
3300016387\|Ga0182040_10428153	Not Available	1044	Open in IMG/M
3300019361\|Ga0173482_10504857	Not Available	588	Open in IMG/M
3300025910\|Ga0207684_10002924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16927	Open in IMG/M
3300025915\|Ga0207693_10174083	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1694	Open in IMG/M
3300025928\|Ga0207700_10225769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1590	Open in IMG/M
3300026334\|Ga0209377_1054425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1775	Open in IMG/M
3300026446\|Ga0257178_1013908	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	917	Open in IMG/M
3300026498\|Ga0257156_1068003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	737	Open in IMG/M
3300026528\|Ga0209378_1188760	Not Available	711	Open in IMG/M
3300027903\|Ga0209488_10150578	Not Available	1756	Open in IMG/M
3300031544\|Ga0318534_10433340	Not Available	754	Open in IMG/M
3300031545\|Ga0318541_10005069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5501	Open in IMG/M
3300031573\|Ga0310915_10011934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	5072	Open in IMG/M
3300031573\|Ga0310915_10381541	Not Available	1000	Open in IMG/M
3300031668\|Ga0318542_10438175	Not Available	677	Open in IMG/M
3300031713\|Ga0318496_10022351	All Organisms → cellular organisms → Bacteria → Nitrospirae	3139	Open in IMG/M
3300031724\|Ga0318500_10496032	Not Available	613	Open in IMG/M
3300031724\|Ga0318500_10700843	Not Available	516	Open in IMG/M
3300031770\|Ga0318521_11009259	Not Available	510	Open in IMG/M
3300031771\|Ga0318546_10009839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5029	Open in IMG/M
3300031781\|Ga0318547_10036116	All Organisms → cellular organisms → Bacteria → Nitrospirae	2580	Open in IMG/M
3300031781\|Ga0318547_10690206	Not Available	634	Open in IMG/M
3300031805\|Ga0318497_10064703	Not Available	1912	Open in IMG/M
3300031845\|Ga0318511_10313716	Not Available	710	Open in IMG/M
3300031879\|Ga0306919_10392995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300031879\|Ga0306919_10525360	Not Available	913	Open in IMG/M
3300031890\|Ga0306925_10040270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4828	Open in IMG/M
3300031890\|Ga0306925_10497815	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300031890\|Ga0306925_11805234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031897\|Ga0318520_10005850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4969	Open in IMG/M
3300031942\|Ga0310916_10169790	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300031945\|Ga0310913_10328933	Not Available	1080	Open in IMG/M
3300031946\|Ga0310910_10014554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc2d	5023	Open in IMG/M
3300031947\|Ga0310909_10198851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1665	Open in IMG/M
3300032001\|Ga0306922_10147892	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300032001\|Ga0306922_10166579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2361	Open in IMG/M
3300032035\|Ga0310911_10508339	Not Available	698	Open in IMG/M
3300032059\|Ga0318533_11151250	Not Available	568	Open in IMG/M
3300032076\|Ga0306924_10908390	Not Available	973	Open in IMG/M
3300032261\|Ga0306920_100197837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2999	Open in IMG/M
3300033289\|Ga0310914_10253131	Not Available	1582	Open in IMG/M
3300033289\|Ga0310914_11095668	Not Available	697	Open in IMG/M
3300033289\|Ga0310914_11470791	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.37%
Host-Associated	Host-Associated	4.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.37%
Plants	Host-Associated → Plants	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.22%
Loam	Environmental → Terrestrial → Soil → Loam	23.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013500	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10312222	3300000655	Forest Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDAPTSLASTQPQP*
AF_2010_repII_A001DRAFT_100161122	3300000793	Forest Soil	VQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQQEAKSKDAPTSLASTQPQPLDENRSHDGEPIRHSE*
AF_2010_repII_A001DRAFT_100339573	3300000793	Forest Soil	MIKTRTVQTLAKTYEDRAAECSRAAQQTDDPVFRRLWLMLASQWKFVAQEEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE*
AP72_2010_repI_A100DRAFT_10301632	3300000837	Forest Soil	VQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLVAQQEAKSKDAPTSLASTQPQPLDESQSRDGEPIR
JGI10216J12902_1064516092	3300000956	Soil	MQTLAKVYEDRAENYTRAAERTDDPVFRRLLLMLALQWKQAAQEAAKSKDAPTSLASTPQRTAPHAR*
Ga0066395_101687543	3300004633	Tropical Forest Soil	VQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQL*
Ga0066672_102065452	3300005167	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0066688_102065892	3300005178	Soil	VPVQTLAKAYEDRAEDYTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKNAPTPRVSS
Ga0066678_101839302	3300005181	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0066388_1004181901	3300005332	Tropical Forest Soil	VQTLANVYEDRAAEYSRAAEQTDDPVFRRLLLMLASQWKLAGQQEAKSKDAPTSLAST*
Ga0066388_1021279682	3300005332	Tropical Forest Soil	AECSRAAQQADDPVFRRLLLMLASQWKLAAREEAKSKDAPTPLASTQPQPLDESRSRDGEPIRHSE*
Ga0066388_1023734703	3300005332	Tropical Forest Soil	EDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKRKDAPTSLASTQPQPLDESRSRDGEPIRHSE*
Ga0066388_1064298571	3300005332	Tropical Forest Soil	ECSRTAQQTDDPVFRRLLLMLASQWKLAAQQEAKNKDAPTSLASKQPQPLDESLPQR*
Ga0066388_1072434873	3300005332	Tropical Forest Soil	ECSRAAQQTDDPVFRRLLLMLASQWKLVAQQEAKSKDAPTPLASTQPQPLDESQSRDGEPIRHSE*
Ga0070708_1000885356	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GEGCRASPLLRRGRTVQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0070706_1018913351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0070698_1014749751	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASKQPQPLDESLPQR*
Ga0070699_1003171383	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0070699_1013168933	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0070697_1007570662	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0066905_1003688633	3300005713	Tropical Forest Soil	VQTLAKVYEDRADEFSRRAAQQTDDPVFCRLLLMLALQWKLAAQGEAKSKDAPTSLASTQPQP*
Ga0066905_1005571112	3300005713	Tropical Forest Soil	RRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDKSRSRDGEPIRHSE*
Ga0066905_1012226421	3300005713	Tropical Forest Soil	EDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0066905_1012904221	3300005713	Tropical Forest Soil	TVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKFAAQEEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE*
Ga0066905_1013495972	3300005713	Tropical Forest Soil	QQADDPVFRRLLLMLASQWKLAAREEAKSKDAPTPLASTQPQTLDESRSRDDEPIRHSE*
Ga0066903_1002885893	3300005764	Tropical Forest Soil	VQTPAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKFAAQEEAKSKEAPTSLASTQPQPLDESLPQR*
Ga0066903_1022442672	3300005764	Tropical Forest Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLASQWKLAAQEEAKSDAPTSLASTQPQP*
Ga0066903_1054918352	3300005764	Tropical Forest Soil	EGCRASPLLRRGRTVQTLAKAYEDRAAECSCAAQQTDDPVFRRLLFMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESRSCGGKPIRHSE*
Ga0066903_1089443211	3300005764	Tropical Forest Soil	AQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLVSTQPQPPDENRSRDGEPIRHSE
Ga0075431_1004103332	3300006847	Populus Rhizosphere	VPVQTLAKVYEDRAEKLTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKDAPTSLASTPQRTAPRAR*
Ga0075435_1009657491	3300007076	Populus Rhizosphere	KVYEERAKECARAAEVTDDPVFRRLLLMLASQWKLAAHGEAKSKDTSSTTTQSTPVGERHSVDRREP*
Ga0075418_110011401	3300009100	Populus Rhizosphere	MQTLAKVYEDRAENYTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKDAPTSLASTPQRTADRAR*
Ga0114129_104373684	3300009147	Populus Rhizosphere	VPVQTLAKVYEDRAEKLTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKDAPTSLASTPQRT
Ga0105249_126093611	3300009553	Switchgrass Rhizosphere	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNNDAPTSLASTQPQPLDESLPQR*
Ga0126374_106238831	3300009792	Tropical Forest Soil	KVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0126380_101536853	3300010043	Tropical Forest Soil	MQTLAKDYEDRAAECSRSAQQTDDPVFRRLLLMLASQWKLAAQEEASKDAPTSLASTQPQSLNESLPQR*
Ga0126384_101509551	3300010046	Tropical Forest Soil	EDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQL*
Ga0126382_110196662	3300010047	Tropical Forest Soil	VQTLAKVYEDRAAECSRAAQQTDDLVFRRLLLMLASQWKLAAQEEAKSKDAP
Ga0126373_102412342	3300010048	Tropical Forest Soil	VQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE*
Ga0126373_122200721	3300010048	Tropical Forest Soil	LAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQSLDESLPQR*
Ga0134070_102856091	3300010301	Grasslands Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESLPQR*
Ga0134080_101526051	3300010333	Grasslands Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR*
Ga0126370_107479382	3300010358	Tropical Forest Soil	RASPLLRRGRTVQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQSLDESLPQR*
Ga0126372_114517023	3300010360	Tropical Forest Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAKSKDAPTSLASTQPQPLDEAATVNPFDTP
Ga0126372_115092181	3300010360	Tropical Forest Soil	AKAYEDRAAECSRAAQQADDPVFRRLLLMLASQWKLAAREEAKSKDAPTPLASTQPQPLDESRSRDDEPIRHSE*
Ga0126378_134582801	3300010361	Tropical Forest Soil	VQTPAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKFAAQEEAKSKEAPTSLASTQPQL*
Ga0126377_129529841	3300010362	Tropical Forest Soil	AAEYSRAAQQTDDPVFRRLLLMLASQWKLAAQEEASKDAPTSLASTQPQSLNESLPQR*
Ga0126379_106815113	3300010366	Tropical Forest Soil	LRRGRTVQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQSLDESLPQR*
Ga0126381_1017795891	3300010376	Tropical Forest Soil	RRGRTVQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQSLDESLPQR*
Ga0126381_1030861862	3300010376	Tropical Forest Soil	VQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAP
Ga0126381_1033304792	3300010376	Tropical Forest Soil	GRTVQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLALQWKLAGQQEAKSKDALASLAST*
Ga0126381_1033695391	3300010376	Tropical Forest Soil	SRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0126383_111339933	3300010398	Tropical Forest Soil	AQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPISLASTQPQPLDESRSRDGEPIRHPE
Ga0124844_12642861	3300010868	Tropical Forest Soil	SRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTPPQSLDESLPQR*
Ga0137376_101615344	3300012208	Vadose Zone Soil	VQTLAKAYEDRAEDYTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKNAPTPRVSS*
Ga0137384_114246711	3300012357	Vadose Zone Soil	QQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDESLPQR*
Ga0137361_108161572	3300012362	Vadose Zone Soil	VYEDRAAECSRTAQQTDDPVFRRLLLMPASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR*
Ga0164300_102313452	3300012951	Soil	RGEGCRASPLLRRGRTVQTLSKVYEDRAAECSRTAQQTDDPVFRGLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR*
Ga0126369_107973882	3300012971	Tropical Forest Soil	VQTPAKVYEDRAAECSRAAQQTDDPVFRRLLFMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESRSCGGKPIRHSE*
Ga0126369_111641661	3300012971	Tropical Forest Soil	RASPLLRRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQSLDESLPQR*
Ga0120195_10328011	3300013500	Terrestrial	PVQTLAKVYEDRAEDYTRAAERTDDPVFRRLLLMLALQWKQAAQEEAKSKDTPNGLEGT*
Ga0182033_100103332	3300016319	Soil	VQILAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0182034_115339651	3300016371	Soil	VQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWKLAGQQEAKSKDAPTSLASTQPQL
Ga0182040_104281532	3300016387	Soil	YEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTRPQPLDESLPQR
Ga0182039_115238751	3300016422	Soil	EDRADEFSRAAQQTDDPVFCRLLLMLALQWKLAAQGEAKSKDASTSLASTQPQP
Ga0173482_105048571	3300019361	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNNDAPTSLASTQPQP
Ga0207684_1000292413	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR
Ga0207693_101740831	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKNKDAPTSLASTQPQPLDE
Ga0207700_102257693	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLNQSLPQR
Ga0209377_10544252	3300026334	Soil	QTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR
Ga0257178_10139081	3300026446	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEAAKSKDAPTSLA
Ga0257156_10680031	3300026498	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSDDAPTSLASTQPQPLDESLPQR
Ga0209378_11887601	3300026528	Soil	LAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSNDAPTSLASTQPQPLDESLPQR
Ga0209488_101505781	3300027903	Vadose Zone Soil	VPEQTLAKAYEERAEDCSRAAQGTDDPVFRRLLLMLAAQWKLAAQEAAKSKDAPTSLASTQPQPLDESLPQR
Ga0318534_104333401	3300031544	Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDAPTSL
Ga0318541_1000506910	3300031545	Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLALQWKLAAQGEAKSKDASTSLASTQPQP
Ga0310915_100119348	3300031573	Soil	VQTLAKAYEDRAAECSSSAQQTDDPVFSRLLLMLALQWKLAAQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310915_103815411	3300031573	Soil	TLAKVYEDRAAEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDASTSLASTQPQP
Ga0318542_104381752	3300031668	Soil	GRTVQTLAKVYDDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR
Ga0318496_100223512	3300031713	Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDAPTSLASTQPQP
Ga0318500_104960321	3300031724	Soil	LAKVYEDRADEFSRAAQQTDDPVFCRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQL
Ga0318500_107008431	3300031724	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTRPQPLDESLPQR
Ga0318521_110092592	3300031770	Soil	EHSRAAQQTDDPVFCRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0318546_1000983910	3300031771	Soil	VQTLAKVYEDRAAEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDASTSLASTQPQP
Ga0318547_100361161	3300031781	Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLALQWKLAAQGEAKSKDAST
Ga0318547_106902061	3300031781	Soil	VQTLANVYEDRAAEYSRAAEQTGDPVFRRLLLMLASQWKLAGQQEAKSKDAPTSLASTQP
Ga0318523_104096951	3300031798	Soil	VQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQQEAKSKDAPTS
Ga0318497_100647033	3300031805	Soil	VQTLAKVYEDRAAEFSRAAQQTDDPVFCRLLLMLASQWKLAAQGEAKSKDTSTSLASTQPQP
Ga0318511_103137161	3300031845	Soil	VQTLAKAYEDRAAECSSSAQQTDDPVFSRLLLMLALQWKLAAQQEAKSKDAPTSLAS
Ga0306919_103929952	3300031879	Soil	MSGFTAARRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR
Ga0306919_105253601	3300031879	Soil	EDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTRPQPLDESLPQR
Ga0306925_100402709	3300031890	Soil	VQTLAKVYEDRAAECSRTAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0306925_104978152	3300031890	Soil	VQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR
Ga0306925_118052342	3300031890	Soil	RGRIVQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQL
Ga0318520_100058504	3300031897	Soil	VQTLAKVYEDRADEFSRAAQQTDDPVFCRLLLMLALQWKLAAQGETKSKDAPTSLASTQPQP
Ga0310916_101697904	3300031942	Soil	YEDRAAEYSRAAQQTDDPVFCRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310913_103289332	3300031945	Soil	MSGFTAARRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310910_100145541	3300031946	Soil	AKAYEDRAAEYSRAAQQTDDPVFCRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310909_101988512	3300031947	Soil	RAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSEDAPTSLASTQPQPLDESLPQR
Ga0306922_101478921	3300032001	Soil	VQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGQQEAKSKDAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0306922_101665791	3300032001	Soil	VQTLAKVYEDRAAECSRRAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAATSLASTQPQPLDES
Ga0310911_105083392	3300032035	Soil	RDVGLHRCLRRGRTVQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLASQWELAGRQEAKSKDAPTSLASTSALDESRSRDGEPIRHSE
Ga0318533_111512502	3300032059	Soil	TVQTLANVYEDRAAEYSRAAQQTDDPVFRRLLLMLALQWKLAGQQEAKSKDALASLAST
Ga0306924_109083902	3300032076	Soil	RRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0306920_1001978376	3300032261	Soil	VQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310914_102531311	3300033289	Soil	VQTLAKAYEDRAAECSSSAQQTDDPVFSRLLLMLALQWKLAAQQEAKSKDAPTSLASTQPQPLDESRSRDGE
Ga0310914_110956681	3300033289	Soil	YGGRGFKRSIRQTRRRMSGFTAARRGRTVQTLAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKAAPTSLASTQPQPLDESRSRDGEPIRHSE
Ga0310914_114707911	3300033289	Soil	CRASPLLRRGRTVQILAKVYEDRAAECSRAAQQTDDPVFRRLLLMLASQWKLAAQEEAKSKDAPTSLASTQPQPLDESRSCDGEPIRHSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090024

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences