Metagenome Family F090021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090021
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	145 residues
Representative Sequence	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGAR
Number of Associated Samples	96
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.22 %
% of genes near scaffold ends (potentially truncated)	61.11 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.926 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (12.037 % of family members)
Environment Ontology (ENVO)	Unclassified (26.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF06902	Fer4_19	6.48
PF00027	cNMP_binding	1.85
PF06742	DUF1214	1.85
PF03354	TerL_ATPase	0.93
PF00313	CSD	0.93
PF13808	DDE_Tnp_1_assoc	0.93
PF08240	ADH_N	0.93
PF06863	DUF1254	0.93
PF07637	PSD5	0.93
PF02371	Transposase_20	0.93
PF04972	BON	0.93
PF00733	Asn_synthase	0.93
PF03466	LysR_substrate	0.93
PF04932	Wzy_C	0.93
PF11453	DUF2950	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	2.78
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	1.85
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
All Organisms	root	All Organisms	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
cellular organisms	root	All Organisms → cellular organisms	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25.93 %
Sneathiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales	1.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	17.59 %
Sneathiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae	1.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	16.67 %
Oceanibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Oceanibacterium	1.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.93 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	16.67 %
Oceanibacterium hippocampi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Oceanibacterium → Oceanibacterium hippocampi	1.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.93 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	16.67 %
Oceanibacterium hippocampi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Oceanibacterium → Oceanibacterium hippocampi	1.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.93 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12062473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	513	Open in IMG/M
3300000956\|JGI10216J12902_100345108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8755	Open in IMG/M
3300001990\|JGI24737J22298_10120076	Not Available	777	Open in IMG/M
3300001991\|JGI24743J22301_10103205	Not Available	615	Open in IMG/M
3300004156\|Ga0062589_102401073	Not Available	544	Open in IMG/M
3300004479\|Ga0062595_100560188	Not Available	878	Open in IMG/M
3300004479\|Ga0062595_102160474	Not Available	544	Open in IMG/M
3300004480\|Ga0062592_100895194	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300004643\|Ga0062591_100785258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	876	Open in IMG/M
3300005329\|Ga0070683_101256913	Not Available	712	Open in IMG/M
3300005329\|Ga0070683_101876421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	576	Open in IMG/M
3300005335\|Ga0070666_10785381	Not Available	701	Open in IMG/M
3300005339\|Ga0070660_100503643	Not Available	1007	Open in IMG/M
3300005365\|Ga0070688_100071390	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300005366\|Ga0070659_101052862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	716	Open in IMG/M
3300005435\|Ga0070714_101769312	Not Available	603	Open in IMG/M
3300005459\|Ga0068867_101874280	Not Available	565	Open in IMG/M
3300005466\|Ga0070685_10537165	Not Available	833	Open in IMG/M
3300005535\|Ga0070684_100034302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4338	Open in IMG/M
3300005615\|Ga0070702_100418206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	964	Open in IMG/M
3300006847\|Ga0075431_101000972	Not Available	803	Open in IMG/M
3300006871\|Ga0075434_100488288	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300007076\|Ga0075435_100936269	Not Available	756	Open in IMG/M
3300009093\|Ga0105240_11644474	Not Available	671	Open in IMG/M
3300009100\|Ga0075418_10686794	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300009101\|Ga0105247_10800405	Not Available	719	Open in IMG/M
3300009146\|Ga0105091_10126568	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300009147\|Ga0114129_10502764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1583	Open in IMG/M
3300009148\|Ga0105243_11510997	Not Available	696	Open in IMG/M
3300009156\|Ga0111538_10331251	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300009157\|Ga0105092_10040883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2478	Open in IMG/M
3300009157\|Ga0105092_10871831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	530	Open in IMG/M
3300009162\|Ga0075423_10404268	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300009166\|Ga0105100_10312470	Not Available	944	Open in IMG/M
3300009168\|Ga0105104_10088652	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300009174\|Ga0105241_10411189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1189	Open in IMG/M
3300009176\|Ga0105242_10993617	Not Available	846	Open in IMG/M
3300009637\|Ga0116118_1234332	Not Available	567	Open in IMG/M
3300010373\|Ga0134128_10885586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	988	Open in IMG/M
3300010379\|Ga0136449_102565671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	728	Open in IMG/M
3300010400\|Ga0134122_10217843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1593	Open in IMG/M
3300011998\|Ga0120114_1096531	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300012897\|Ga0157285_10030796	Not Available	1207	Open in IMG/M
3300012908\|Ga0157286_10386125	Not Available	539	Open in IMG/M
3300012911\|Ga0157301_10278967	Not Available	600	Open in IMG/M
3300012912\|Ga0157306_10185491	Not Available	687	Open in IMG/M
3300012958\|Ga0164299_10108138	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300013102\|Ga0157371_10125664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1824	Open in IMG/M
3300013104\|Ga0157370_10249737	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300013105\|Ga0157369_10013409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9267	Open in IMG/M
3300013297\|Ga0157378_10427064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1311	Open in IMG/M
3300013306\|Ga0163162_10304630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1726	Open in IMG/M
3300013307\|Ga0157372_11948232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	675	Open in IMG/M
3300013768\|Ga0120155_1176790	Not Available	572	Open in IMG/M
3300014745\|Ga0157377_10115316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1620	Open in IMG/M
3300014968\|Ga0157379_10306568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1448	Open in IMG/M
3300014968\|Ga0157379_12157342	Not Available	553	Open in IMG/M
3300014969\|Ga0157376_11188218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	791	Open in IMG/M
3300015077\|Ga0173483_10100792	Not Available	1202	Open in IMG/M
3300015077\|Ga0173483_10945531	Not Available	512	Open in IMG/M
3300015201\|Ga0173478_10840748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	508	Open in IMG/M
3300015374\|Ga0132255_101872239	Not Available	912	Open in IMG/M
3300015374\|Ga0132255_101924729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	899	Open in IMG/M
3300017792\|Ga0163161_12092154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	503	Open in IMG/M
3300017822\|Ga0187802_10205589	Not Available	758	Open in IMG/M
3300017822\|Ga0187802_10365115	Not Available	568	Open in IMG/M
3300017928\|Ga0187806_1189499	Not Available	693	Open in IMG/M
3300017928\|Ga0187806_1313401	Not Available	555	Open in IMG/M
3300017932\|Ga0187814_10378977	Not Available	549	Open in IMG/M
3300017933\|Ga0187801_10368345	Not Available	593	Open in IMG/M
3300017937\|Ga0187809_10020507	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2111	Open in IMG/M
3300017942\|Ga0187808_10352605	Not Available	668	Open in IMG/M
3300017943\|Ga0187819_10150018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1388	Open in IMG/M
3300017955\|Ga0187817_10101950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1806	Open in IMG/M
3300017955\|Ga0187817_10501550	Not Available	774	Open in IMG/M
3300018001\|Ga0187815_10229358	Not Available	786	Open in IMG/M
3300018001\|Ga0187815_10474697	Not Available	535	Open in IMG/M
3300018022\|Ga0187864_10058311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2134	Open in IMG/M
3300018028\|Ga0184608_10490738	Not Available	526	Open in IMG/M
3300019362\|Ga0173479_10295376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Oceanibacterium → Oceanibacterium hippocampi	736	Open in IMG/M
3300023077\|Ga0247802_1103301	Not Available	500	Open in IMG/M
3300025912\|Ga0207707_11334653	Not Available	575	Open in IMG/M
3300025914\|Ga0207671_10595148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	881	Open in IMG/M
3300025916\|Ga0207663_10306121	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300025920\|Ga0207649_10702830	Not Available	784	Open in IMG/M
3300025934\|Ga0207686_10741543	Not Available	783	Open in IMG/M
3300025935\|Ga0207709_11188454	Not Available	628	Open in IMG/M
3300025939\|Ga0207665_11067489	Not Available	643	Open in IMG/M
3300025944\|Ga0207661_10023488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4660	Open in IMG/M
3300026089\|Ga0207648_11288578	Not Available	686	Open in IMG/M
3300026142\|Ga0207698_10692530	Not Available	1013	Open in IMG/M
3300027722\|Ga0209819_10251858	Not Available	612	Open in IMG/M
3300028379\|Ga0268266_11041271	Not Available	792	Open in IMG/M
3300031229\|Ga0299913_10618488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1065	Open in IMG/M
3300031908\|Ga0310900_10726575	Not Available	797	Open in IMG/M
3300031949\|Ga0214473_10020142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7800	Open in IMG/M
3300031997\|Ga0315278_10084456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3172	Open in IMG/M
3300031999\|Ga0315274_12048701	Not Available	512	Open in IMG/M
3300032000\|Ga0310903_10187276	Not Available	960	Open in IMG/M
3300032118\|Ga0315277_10718118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Oceanibacterium → Oceanibacterium hippocampi	958	Open in IMG/M
3300032156\|Ga0315295_10892383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300032160\|Ga0311301_11106881	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300032160\|Ga0311301_11646292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	777	Open in IMG/M
3300032164\|Ga0315283_12290056	Not Available	529	Open in IMG/M
3300032401\|Ga0315275_10839944	Not Available	1016	Open in IMG/M
3300032516\|Ga0315273_10033155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6896	Open in IMG/M
3300032516\|Ga0315273_11424534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	857	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.81%
Host-Associated	Host-Associated	35.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	37.04%
Plants	Host-Associated → Plants	35.19%
Aquatic	Environmental → Aquatic	27.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.04%
Freshwater	Environmental → Aquatic → Freshwater	26.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.89%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Lake	Environmental → Aquatic → Freshwater → Lake	7.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_120624731	3300000890	Soil	MMSDRQFAELELRATICPGQCEWPKPEYVHWQKLHEAANEARANVTKAYTEMDKIDRNASLSSDIKYRRRCEIADQAIADFEASKTLARARQAIELAMAKYQVDQQVSPEIAQDSEATLKAMKELERGWPRAMEKIAERASLTKGLDTRR*
JGI10216J12902_10034510814	3300000956	Soil	MMSDKEFAELELRAVICPRQCQWPKAEYVHWRKLHEAANEARARVSKAYAQMDETDRNTDLSGDGKYRERSKTADEAIADFEASKTLVRARETVELALVKRNSEQHVSPEIAQDSEAMLKALKEVERAWQRAMDKIAERAG
JGI24737J22298_101200761	3300001990	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAE
JGI24743J22301_101032051	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKE
Ga0062589_1024010731	3300004156	Soil	MMSDKAFAELELRATICPGQCEWPKPEYIHWQKLHEAANEARERVKKVYMQMDEIDRNGDLSPDGKYRYRSKTAAQAIADFEVSKTLERARRAVELAVAKHKFEQDVSPEIAQDREAALKAMKELER
Ga0062595_1005601881	3300004479	Soil	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0062595_1021604741	3300004479	Soil	MSRIGPKWGYRCSFKDTPASKSYGLRTDEIDRTPGLSREGKYRERSKIADVAIADFEASKTLARAREAIEFATAKLNLDQHSSPEIAHDSEVMLKAMKEVEWGWQRAMEKIAERASLTKSSAIRR*
Ga0062592_1008951942	3300004480	Soil	RAMIVPHQVRWPAPEHLYWQRLHEAANEARERVRRAHTQMDEIDRNADLSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGCQRAIDLISERACLTKSPAPNWRAAKFRPHPVTSW*
Ga0062591_1007852581	3300004643	Soil	MMSDKDFAELELRAAICPHQIRWPKEALHWRKLHEVADEARERVTRALVAMDKIDRNASLSSDIKYRRRCEIADQAIADFEASKTLARARQAIELAMAKYQVDQQVSPEIAQDSEATLKAMKELERGWPRAMEKIAERASLTKGPDTRR*
Ga0070683_1012569132	3300005329	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDLISERACLTKSPAPNWRA
Ga0070683_1018764211	3300005329	Corn Rhizosphere	LAEQAYRRISCEWPKTEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERASLTKGPDTRVRFWG*
Ga0070666_107853811	3300005335	Switchgrass Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGA
Ga0070660_1005036432	3300005339	Corn Rhizosphere	MNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*TDGGMSAVTPKADV
Ga0070688_1000713903	3300005365	Switchgrass Rhizosphere	MNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0070659_1010528622	3300005366	Corn Rhizosphere	RAMMSDKEFTELELRATICPGQCQWPKSEYVHWQKLHAAGNEARARVSKAYAQMDETDRNTGLSGDDKYRERSKIADEAIANFEASKTLARAREAVELAVAKRKFEQDVSPEIAQDREAALKAMKELERAWQRAIDKIAERASLTKGPNTRR*
Ga0070714_1017693121	3300005435	Agricultural Soil	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGAR
Ga0070705_1003968551	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RRHGGLAEQAYRRISCEWPKTEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERAGLTKRLDTRR*
Ga0068867_1018742801	3300005459	Miscanthus Rhizosphere	MMSDKKFAELELRATICPQQCRWPKDEYVHWQRLHAVPNEARERVRKAYLQMDEIDRTADLSRDGKYRQRNEIAAQAIADFEASRTLARAREAVELAVAEHRAEQQVSPEIAHDSEVTLKAMKEAEHGWRRAIDKIAERASLTKFQRGDDC*
Ga0070685_105371652	3300005466	Switchgrass Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARCGALISGRIQYFRAC*
Ga0070684_1000343021	3300005535	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDNKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0070702_1004182061	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MMSDKEFGELELRATICPRQCEWPKPEYVHWQKLHEAANEARQRLSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERAGLTKRLDTRR*
Ga0075431_1010009722	3300006847	Populus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQKAIDLISERACLTKSPAPNWRAAKFRPRPVTSW*
Ga0075434_1004882881	3300006871	Populus Rhizosphere	EYAELKLRAMIVPHQVRWPAPEHLHWQRLHEAANEARERVSKFYTLADEIDHNTDLSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0075435_1009362691	3300007076	Populus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMI
Ga0105240_116444741	3300009093	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQR
Ga0075418_106867942	3300009100	Populus Rhizosphere	QVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0105247_108004052	3300009101	Switchgrass Rhizosphere	MMSDKKFAELELRATICPQQCRWPKDEYVHWQRLHAVPNEARERVRKAYLQMDEIDRTADLSRDGKYRQRNEIAAQAIADFEASRTLARAREAVELAVAEHRAEQQVSPEIAHDSEVTLKAMK
Ga0105091_101265682	3300009146	Freshwater Sediment	ATIVPQQVRWPAPEYLHWQRLHEAANEARERVSKACMQMDEIDRNADLSRDGKYRQRNKISAQAIADFEASKTLASAHEAVERVVAKHKRDQQVSPEVAKDRDATVKAMQEVEQDWPKAMDKIAKRAGLSKSPGIRR*
Ga0114129_105027641	3300009147	Populus Rhizosphere	MMSDKNFAELELRATICPHQIRWPKDALHWRKLHDATNEARARVTKAYTEMDEIDRNASLSSDIKYRQRCAIADQAIADFEASKTLARARQAIELAMGKYQVDQQVSPEIAQDSEATLTAMKELERGWPRAMEKIAERASLTKGP
Ga0105243_115109971	3300009148	Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEA
Ga0111538_103312513	3300009156	Populus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRVDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0105092_100408832	3300009157	Freshwater Sediment	MNDKEFSELQLRMMIVPRQVRWPAPEYLHCQRLHAAANEARERVSKAYMQMDEIDRNPDLSRDGKCRQRSKAAAQAIANFEASKTLASAHEAVERVVAKHKRDQQVSPEVAKDRDATVKAMQEVEQDWPKAMDKIAKRAGLSKSPGIRR*
Ga0105092_108718311	3300009157	Freshwater Sediment	QVRWPAPEYLHWQRLHEAANEARERVSKAYMQMDEIDRNADLSRDGKYRQRNKISAQAIADFEASKTLARACEAVELAVAKRNWEGHDSPEIAKDSEDMLRALKDVERGWQRAIDKIAERAGLTKVAGTRG*
Ga0075423_104042681	3300009162	Populus Rhizosphere	APEHLHWQRLHEAANEARERVSKFYTLADEIDHNTDLSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0105100_103124701	3300009166	Freshwater Sediment	MTAMMSDREFAELELRATICPKQSEWPKPDYIVWQKLHEAANEARARVSKFYMLLDDIDRNAELSRDGKYRQRSKTAAEAIAEFEGSKTLARARQAVELTVAKHNLEHHVRDATRKALKEAERGWETAIDKIAERASLTKGPERYR*
Ga0105104_100886521	3300009168	Freshwater Sediment	EECKMNDKEFSELQLRMMIVPRQVRWPAPEYLHCQRLHAAANEARERVSKAYMQMDEIDRNPDLSRDGKCRQRSKAAAQAIANFEASKTLASAHEAVERVVAKHKRDQQVSPEVAKDRDATVKAMQEVEQDWPKAMDKIAKRAGLSKSPGIRR*
Ga0105241_104111893	3300009174	Corn Rhizosphere	WLPRSEIQKLHEAANEARARVSKFYALADEIDRNAGLSGDDKYRQRSKSADEAIADFEASKTLAHARQAIELAMGKYQVDQQVSPEIAQDSEATLTAMKELERGWPRAMEKIAERASLTKGPDTRRNPPRGVYS*
Ga0105242_109936171	3300009176	Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAI
Ga0116118_12343321	3300009637	Peatland	GEHEMMNDKEYAELKLRAMIVPKQASWPAPEYLHWQRLHEAANEARERVSKFYTLADGIDRNAALSREDKARQRHRVAMQVFAEFEASKTLARAREAVELAVAKHNVEQHVSPEIAEARDAMKDAEQGWQKAIDKIAERVSLPDTRRNPPWGVYSKSSLPHRR*
Ga0134128_108855862	3300010373	Terrestrial Soil	MGGGTQTRYVHWRKLHDATDEARARVTNAYTEMDEIDRNASLSSDIKYRRRCEIADQAIADFEASKTLARAREAVELAMGKYQVDQQVSPEIAQDSEATLTAMKELERGWPRAMEKIAERASLTKGPDTRRNPPRGVYS*
Ga0136449_1025656712	3300010379	Peatlands Soil	MDRSEGEGKPEVMNDKEFFELQLRMMIVPHQARWPAPELLHWKKLHAVANEARERVNKAYTQMDEIDRNADLSRDAKYRQRCKTAAQAIADFEASKTLARAREAVELAVAKHNVEQHVSPEIAEARDA
Ga0134122_102178431	3300010400	Terrestrial Soil	KPEYVHWQKLHEAANEARQRLSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERAGLTKRLDTPR*
Ga0120114_10965311	3300011998	Permafrost	MMSDKEFAELELRATVCPGQCEWPKPEYVHWQKLHEAANEARERVSKAYMQMDEIDRNADLSRDGKYRQRNKTAAQAIADFEASKTLARARQAVELAVAKHKFEQHVSPEIAKDSEATLKALKEVERG
Ga0157285_100307962	3300012897	Soil	WPKPEYVHWQKLHEAANEARQRLSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKASKEAERGWQRAMDKIAERAGLTKGPNIRQ*
Ga0157286_103861251	3300012908	Soil	GQCEWPKPEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEATLKALKDVERAWQRAMDKIAVVSGGGSVQLTLTPRIPSLPPL*
Ga0157301_102789671	3300012911	Soil	MMSDKEFAELELRATICPGQCEWPAPEYLHWQRLHEAGNEARSRVSKFYTLADEIDRNGDLSPDGKYRQRRKAAAQAIADFEASKTLARACQAVELAVAKRNSEGHVPPEIVRDSEAALKAKKEVERAWQ
Ga0157306_101854911	3300012912	Soil	ASWPAPEHLHWQRLHKVANEARERVSKFFALADEIDRKADLSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDLISERACLTKSPAPNWRAAKFRPHPVTSW*
Ga0164299_101081382	3300012958	Soil	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDLISERACLTKSPAPNWRAAKFRPRPVTSW*
Ga0157371_101256643	3300013102	Corn Rhizosphere	QVRWPKEHLHWQRLHAAANEVRERVSNAYRQMDDIDRNTDLSPDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0157370_102497371	3300013104	Corn Rhizosphere	MARPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0157369_100134093	3300013105	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPQLLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0157378_104270641	3300013297	Miscanthus Rhizosphere	RATIVPRQVRWPAPEYVHWQRLHAVPDEARQRVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERASLTKGPDTRVRFRGKAVIEWCC*
Ga0163162_103046301	3300013306	Switchgrass Rhizosphere	QCEWPKPEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERAGLTKRLDTRR*
Ga0157372_119482322	3300013307	Corn Rhizosphere	MMSDKEFAELELRATICPGQCEWPAPEYPPWQRLHEAGNEARSRVSKFYTLADEIDRNGDLSPDGKYRQRSKTADEAIADFEASKTLARAREAVELAVANRNCEGHVSPEIAQDSEDMLKARKETERGWERAKDKI
Ga0120155_11767901	3300013768	Permafrost	LPKLELKATICPGQSEWSKPEDVHWQKLHETANEARERVRKAYTQMDEIDRNADLSRDGKYRQRSKAAAQAIAALEASTMLARAREAVELAVAKHKFEQHVSPEIAKDSEAVLKATKEVERGWQRAMDKIAERASLTKGPDTRR*
Ga0157377_101153161	3300014745	Miscanthus Rhizosphere	MIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0157379_103065681	3300014968	Switchgrass Rhizosphere	LAEQAYRRISCEWPKTEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQ
Ga0157379_121573421	3300014968	Switchgrass Rhizosphere	MMSDKKFAELELRATICPQQCRWPKDEYVHWQRLHAVPNEARERVRKAYLQMDEIDRTADLSRDGKYRQRNEIAAQAIANFEASRTLARAREAVELAVAEHRAEQQVSPEIAHDSEVTLKAMKEAEHGW
Ga0157376_111882181	3300014969	Miscanthus Rhizosphere	MMSDKKFAELELRATICPQQCRWPKDEYVHWQRLHAVPNEARERVRKAYLQMDEIDRTADLSRDGKYRQRNEIAAQAIADFEASRTLARAREAVELAVAEHRAEQQVSPEIAHDSEVTLKAMKEAEHG
Ga0173483_101007922	3300015077	Soil	MMSDKEFAELELKATICPHQIRWPKDALHWRKLHDATDEARARVTKAYTEMDEIDRNSSLSSDIKYRRRCEIADQAIADFEASKTLARAREAVELALAKRNSEQHVSPEIAEARDATLKALKEPEHGWQRAMDKIAERAGLNKSPGIRR*
Ga0173483_109455311	3300015077	Soil	MEMDDKEFAQLQLRATICPHQARWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDLISERACLTKSPAPNWRAAKFRP
Ga0173478_108407481	3300015201	Soil	MNDKEFFELQLRATIVPRQVRWPAPEYVHWQRLHAVPDEARERVSKFYMLADEIDRNPDLSREGKERQRRKAAAQAIADFEASKTLARAREAVELAVAKHKFEQDVSPEIAQDREAALNAMKELERAWQRAIDKIAERASLTKGPKLWR*
Ga0132255_1018722391	3300015374	Arabidopsis Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEAALKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC*
Ga0132255_1019247291	3300015374	Arabidopsis Rhizosphere	MNDKEFSELQLRMTIVPHQVEWPAPEYVHWQRLHEAANEARERVSKFYTLADGIDRNADLSRDDKYRQRSKTADEAIANFESSRTLARAREAVSHVIQQWKRDEQHVSTEIAEATMKAMKEAEAGWQRAMDKIAERAGRTKGADTRR*
Ga0163161_120921541	3300017792	Switchgrass Rhizosphere	PEYLHWQRLHEAGNEARSRVSKFYALADEIDRNTDLSRDDKYRQRSKTADEAIADFEASKTLARAREAVELAAANRNCEGHVSPEIAQDSEDMLKARKETERGWQRAMDKIAERASLTKAPDTRW
Ga0187802_102055892	3300017822	Freshwater Sediment	MNDKEFSELQLRAMIVPHQASWPAPELLHWRRLHATANEARERVSKFYTLADGIDRNADLSREEKERQRHRVATQVFAEFEASKTLGRAREAVELAVAKHNVQQHVSPEIAEARDAMKEAELGWRRAIDKIAERAAQTKAPDRRRNPPWGVYSKSSPAAQELRCPLSGVKRT
Ga0187802_103651151	3300017822	Freshwater Sediment	PELLHWQKLHAVAKEARERVSRAYMQMDEIDRKADLSRDGKYRQRSKTAAQAIADFEASKTLARARQAVELVVAKRKVEQYVSLEIAKDSEEMLKAMKETERDWPRAMDKIAERVSLPDTRRNPPWGVHSKSSLPHRH
Ga0187806_11894992	3300017928	Freshwater Sediment	MMNDKEFFELQLRMMIVPHQARWPAPELLHWRRLHATANEARERVSKAYMQMDKIDRNAALSRDDKYRQRSETAAQAIADFEASKTLARARQAVELVVAKRKVEQYVSLEIAKDSEEMLKAMKETERDWPRAMDKIAERAAQTKAPDRRRNPPRGVYSKSSLPHGR
Ga0187806_13134012	3300017928	Freshwater Sediment	MDDTEFAQLQLRATICPQQARWAAPEHVHWQRLHEAANEARERVSKFYTLADRIDRNPDLSRDDKYRQRHKIAAQAIADFEASKTLARTLEAVELAVAKYNVEQHVSPEIAEARAATLQAMNEAE
Ga0187814_103789771	3300017932	Freshwater Sediment	MMNDKEFFELQLRAMIVPNQASWPAPELLHWRRLHATANEARERVSKFYTLADGIDRNAALSRDDKYRQRSETAAQAIADFEASKTLARARQAVELVVAKRKVEQYVSPEIAKDSEEMLKAMKETERDWPRAMDKIAERVSLPDTRRNPLWGVYSKSSLPHRR
Ga0187801_103683451	3300017933	Freshwater Sediment	MDDTEFAQLQLRATICPHQARWPAPELLHWQKLHAVANEARERVSRAYMQMDEIDRKADLSRDGKYRQRSKTAAQAIADFEASKTLARARQAVELVVAKRKVEQYVSPEIAKDSEEMLKAMKETERDWPRAMDKIAERVSLPDTRRNPPWGVYSKSSLQHRR
Ga0187809_100205074	3300017937	Freshwater Sediment	LQLRMIIVPHQARWPAPELLHWQKLHAVANEARERVSKFYTLADGIDRNAALSRDDKYRKRSETAAQAIADFEASKTLARAREAVELVVAKRKVAQHASPEIAQDSEDMLKAMKEAEQGWQKAIDKIAERAAQTKAPDRRRNPPWGVYSKSFLPHRC
Ga0187808_103526051	3300017942	Freshwater Sediment	MMNDKEFFELQLRMMIVPHQARWPAPEHVHWQRLHEAANEARERVSKFYTLADGIDRNAALPRDDKYRKRSETAAQAIADFEASKTLARARQAVELVVAKRKVEQYVSPEIAKDSEEMLKAMKETERDWPRAMDKIAERAAQTKAPD
Ga0187819_101500182	3300017943	Freshwater Sediment	MMNDEEYSELKLRAMIVPKQASWPAPELVHWQRLHAAADEARERVSKAYMQMDEIDRNADLSRDGKYRQRSKIAAQEIAGLEASRTLERAREAVCVMEQWKRDEQHGSPEIAEARDATLKAMKEAEAGWRKAIDKIAERVSLTKGPDTRR
Ga0187817_101019503	3300017955	Freshwater Sediment	MNDKEFSELQLRAMIIPKQASWPAPELLHWRRLHATADEARERVRKACMQMDEIDRNAAFSRDDKYRQRSETAAQAIANFEASKTLARARQAVELVVAERKVEQYVSPEIAKDSEEMLKAMKETERDWPRAMDKIAERVSLPDTRRNPPWGVYSKSSVPHRR
Ga0187817_105015501	3300017955	Freshwater Sediment	MMNDEEYSELKLRAMIVPKQASWPAPELVHWQRLHAAADEARERVSKAYMQMDEIDRNADLSRDGKYRQRSKIAAQEIAGLEASRTLERAREAVCVMEQWKRDEQHGSPEIAEARDATLKAMKEAEAGWQKAMDKIAERASLARPWTHKPAAIGGWRA
Ga0187815_102293581	3300018001	Freshwater Sediment	MMNDEEYSALKLRAMIVPKQASWPAPELVHWQRLHAAADEARERVSKAYMQMDEIDRNADLSRDGKYRQRSKIAAQEIAGLEASRTLERAREAVCVMEQWKRDEQHGSPEIAEARDATLKAMKEAEAGWQKAMDKIAERASLARPWTHKPAAIGGWRA
Ga0187815_104746971	3300018001	Freshwater Sediment	ITDKKGTHEMMNDKEYAELKLRAMIVPKQASWPKPEHVHWQRLHDAADEARERVRKACMQMDEIDRNAALSRDDKYRKRSETAAQAIADFEASKTLARAREAVELVVAKRKVAQHASPEIAQDSEDMLKAMKETERDWPKAMNKIAERAAQTKAPDRRRNPPWGVYSKSFLPHGR
Ga0187864_100583112	3300018022	Peatland	MMNDKEYAELKLRAMIVPKQASWPAPEYLHWQRLHEAANEARERVSKFYTLADGIDRYADLSRDDKYRQRSEAAAQAIADFEASKTLARAREAVELAVAKHNVEQHVSPEIAEARDAMKEAEQGWQKATDKIAERVSLPDTRRNPPWGVCSKSSLPHRR
Ga0184608_104907382	3300018028	Groundwater Sediment	MMNDKEYAELKLRAMIVPKQASWPAPEYVHWQRLHEAANEARERVRRLYAAIDEIDSDTDLSREDKERQRRKAAAQAVAEFDASRTLARAREAVSHVIQQWKRDEQHVSTEIAEATMKAMKEAEAGWQRAMDKIAERASLTKGP
Ga0173479_102953761	3300019362	Soil	MMSDKEFTELELRVTICPGQCGWPKPENIVWQKLHAVPNEARERVSKVYAQMDEIDGNADLSRDGKYRQRSKAAAQAIADFEVSKTLERAHRAVELAVAKHKFEQDVSPEIAQDREAALKAMKELERAWQRAMDKIAERASLTKCAAIS
Ga0247802_11033011	3300023077	Soil	MMSDKEFAELELRATICPGQCEWPKPEYVHWQKLHEAANEARQGVSKFYMLADEIDRNPDLSREGKERQRRKAAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAE
Ga0207707_113346532	3300025912	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISG
Ga0207671_105951481	3300025914	Corn Rhizosphere	MMSDKEFGELELRATICPGQCEWPKPEYVHWQKLHEAANEARQRLSKFYMLADKIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERAGLTKRLDTRR
Ga0207663_103061213	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC
Ga0207649_107028301	3300025920	Corn Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEA
Ga0207686_107415431	3300025934	Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPSPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAI
Ga0207709_111884542	3300025935	Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDLISERA
Ga0207665_110674891	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAETKVPGGARCGALISGRIQYFRAC
Ga0207661_100234881	3300025944	Corn Rhizosphere	LAEQAYRRISCEWPKTEYVHWQKLHEAANEARQGVSKFYMLADEIDRNADFSHDGKYRQRSKAADEAMADFEASKTLVRAREAVELALAKRNSEQHVSPEIAQDSEAMLKAMKEAEHGWQRAIDKIAERASLTKGPDTRVRFWG
Ga0207648_112885781	3300026089	Miscanthus Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVP
Ga0207698_106925301	3300026142	Corn Rhizosphere	LRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC
Ga0209819_102518581	3300027722	Freshwater Sediment	MNDKEFSELQLRMMIVPRQVRWPAPEYLHCQRLHAAANEARERVSKAYMQMDEIDRNPDLSRDGKCRQRSKAAAQAIANFEASKTLASAHEAVERVVAKHKRDQQVSPEVAKDRDATVKAMQEVEQDWPKAMDKIAKRAGLSKSPGIRR
Ga0268266_110412712	3300028379	Switchgrass Rhizosphere	MMNDKEYAELKLRAMIVPHQVRWPARELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAMKEAEAGWQRAIDMIVERAAQTKVPGGARRGALISGRIQYFRAC
Ga0299913_106184881	3300031229	Soil	QRLHEVANEARARVSKAYMQMDEIDRNADLSPDDKYRERSKAADEAIADFEASKTLARAGEAVELMVAKLKVEQHVSPEIAKARDTTLNAMKEAEQGWGKAIDKIAERASLTNFPVRSVGACTQNSCGPRH
Ga0310900_107265751	3300031908	Soil	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEAHERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVDSVIQQWKRDEQHVSTEIAEATLKAM
Ga0214473_100201426	3300031949	Soil	MNDKEFSELQLRATIVPGQARWPAPEHVHWQRLHEAVNEARERVSKAYVQMDEIDRNADLSRDGKYRQRCKSAAQAIADFEASKTLARARQAVELAVAKHNVEQHVRDVTRKALKEAEHGWQKAMDKIAERAGLTKGPVTRR
Ga0315278_100844561	3300031997	Sediment	MNDKEFSELELRMQIVPQQARWPAPEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQHVSPEIAEDRDGTLKAMKEAEAGWQKAIDKIGERAGRHCQSKLA
Ga0315274_120487011	3300031999	Sediment	PEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQRVSPEIAEDRDGTLKAMKAAEQGWRKAIDKIAERASLTKGPGTRR
Ga0310903_101872761	3300032000	Soil	MMNDKEYAELKLRAMIVPHQVRWPAPELLHWQKLHAVANEARERVSRAHTRMDEVDRNADFSRDDKYRQRSKTAAQAIADFEASKTLARAREAVQHAKAKHSVEQHVRDATRKALKEAEHGWQRAIDKIAERASLTKGPDTRR
Ga0315277_107181181	3300032118	Sediment	MNDKEFSELELRMQIVPQQARWPAPEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQHVSPEIAEDRDGTLKAMKEAEAGWQKAID
Ga0315295_108923832	3300032156	Sediment	MNDKEFSELELRMMIVPRQVRWPAPEYLHWQRLHEAANEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQRVSPEIAEDRDGTLKAMKEAEAGWQKAIDKIGERAGRHCQSKLA
Ga0311301_111068811	3300032160	Peatlands Soil	MMNDKEFGELKLRATIVPGQASWPNPEYGYWQRLHEFVNEARERVSRAYAAMDEIDRNADLSRDDKHRQRHKIAAQAIADFEASKTLARARGAVELALAKHNVEQHVSSEIAEARAATLKAMKEAEQGWQKAIDKIAERAAQTKAPDRRRNPPW
Ga0311301_116462921	3300032160	Peatlands Soil	MDRSEGEGKPEVMNDKEFFELQLRMMIVPHQARWPAPELLHWKKLHAVANEARERVNKAYTQMDEIDRNADLSRDAKYRQRCKTAAQAIADFEASKTLARAREAVELAVAKHNVEQHVSPEIAEARDAMKDAEQGWQKATDKIA
Ga0315283_122900562	3300032164	Sediment	MNDKEFSELELRMQIVPQQARWPAPEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQHVSPEIAEDRDGTLKAMKAAEQGWRKAIDKIAERASL
Ga0315275_108399441	3300032401	Sediment	MNDKEFSELELRMQIVPQQARWPAPEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELMVAKHKVEQHVSPEIAEDRDGTLKAMKEAEAGWQKAIDKIGERAGRHCQSKLA
Ga0315273_100331554	3300032516	Sediment	MNDKEFSELELRMQIVPQQARWPAPEYVHWQRLHAVADEARERVSKAYMSMDEIDRNADLSPDGKYRQRSKTAAQAIADFEESKTMARARDAVELVVAKHKVEQHVSPEIAEDRDGTLKAMKAAEQGWRKAIDKIAERASLTKGAGGTALSRSGPRQ
Ga0315273_114245342	3300032516	Sediment	MNDKEFSELELRMMIVPRQVRWPAPEYLHWQRLHEAANEARERVSKAYTLMDEIDRNAHLSRDGKYRQRSNTAAQAVADFEASKTLARARQAVELAVAKHQVEQDVSPEIAEAKDATLKAMKETEAGWQKAIDKIAERACLTKGPNTRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences