Metagenome Family F089972

Basic Information
Family ID	F089972
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	67 residues
Representative Sequence	MQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCPPGSEVEALARAGGLEVHPLRLRA
Number of Associated Samples	89
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.23 %
% of genes near scaffold ends (potentially truncated)	98.15 %
% of genes from short scaffolds (< 2000 bps)	92.59 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Most Common Taxonomy
Group	Bacteria (90.741 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.148 % of family members)
Environment Ontology (ENVO)	Unclassified (28.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.111 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.91% β-sheet: 9.30% Coil/Unstructured: 62.79%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
c.124.1.5: NagB/RpiA/CoA transferase-like	d1vb5a_	1vb5	0.75
c.124.1.5: NagB/RpiA/CoA transferase-like	d1vb5a_	1vb5	0.75
c.87.1.0: UDP-Glycosyltransferase/glycogen phosphorylase	d6lfna_	6lfn	0.74
c.87.1.0: UDP-Glycosyltransferase/glycogen phosphorylase	d6lfna_	6lfn	0.74
c.124.1.5: NagB/RpiA/CoA transferase-like	d1t5oa1	1t5o	0.72
c.87.1.5: UDP-Glycosyltransferase/glycogen phosphorylase	d3h4ta1	3h4t	0.72
c.124.1.5: NagB/RpiA/CoA transferase-like	d1t5oa1	1t5o	0.72
c.87.1.5: UDP-Glycosyltransferase/glycogen phosphorylase	d3h4ta1	3h4t	0.72
c.1.8.3: (Trans)glycosidases	d1xyza_	1xyz	0.71
c.1.8.3: (Trans)glycosidases	d1xyza_	1xyz	0.71

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13439	Glyco_transf_4	18.52
PF13692	Glyco_trans_1_4	16.67
PF13524	Glyco_trans_1_2	8.33
PF00534	Glycos_transf_1	6.48
PF02709	Glyco_transf_7C	4.63
PF00005	ABC_tran	2.78
PF13579	Glyco_trans_4_4	2.78
PF00664	ABC_membrane	0.93
PF14305	ATPgrasp_TupA	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	23.15 %
Unclassified	root	N/A	9.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.15 %
Unclassified	root	N/A	9.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	13.89 %
Unclassified	root	N/A	9.26 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	6.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	13.89 %
Unclassified	root	N/A	9.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	13.89 %
Unclassified	root	N/A	9.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	13.89 %
Unclassified	root	N/A	9.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01CYZ75	Not Available	519	Open in IMG/M
2228664021\|ICCgaii200_c0844982	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300000890\|JGI11643J12802_10092262	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300000891\|JGI10214J12806_10062682	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300000891\|JGI10214J12806_10874229	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300000956\|JGI10216J12902_106641569	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300000956\|JGI10216J12902_116565447	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300002568\|C688J35102_118093388	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300002568\|C688J35102_119810096	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300003992\|Ga0055470_10018281	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300003996\|Ga0055467_10037631	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300003996\|Ga0055467_10103647	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300004156\|Ga0062589_100743919	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300004463\|Ga0063356_105217733	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300004479\|Ga0062595_100560981	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300004479\|Ga0062595_102174720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	542	Open in IMG/M
3300004480\|Ga0062592_102298754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	539	Open in IMG/M
3300005093\|Ga0062594_103342223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	504	Open in IMG/M
3300005337\|Ga0070682_100966798	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005353\|Ga0070669_100642625	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005456\|Ga0070678_101852706	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005457\|Ga0070662_101875945	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005458\|Ga0070681_10532184	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005518\|Ga0070699_101814532	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005545\|Ga0070695_101318404	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005615\|Ga0070702_100094277	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300005843\|Ga0068860_101536767	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005884\|Ga0075291_1041666	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005885\|Ga0075284_1021417	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005889\|Ga0075290_1010544	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005897\|Ga0075281_1067020	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005904\|Ga0075280_10081657	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006894\|Ga0079215_11067421	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009081\|Ga0105098_10137561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1086	Open in IMG/M
3300009789\|Ga0126307_10220184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1524	Open in IMG/M
3300009789\|Ga0126307_10699545	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300009870\|Ga0131092_10640874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	919	Open in IMG/M
3300010037\|Ga0126304_10308897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1048	Open in IMG/M
3300010039\|Ga0126309_10371537	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010396\|Ga0134126_12726038	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012668\|Ga0157216_10115969	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300012668\|Ga0157216_10457275	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012684\|Ga0136614_11108429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	541	Open in IMG/M
3300012910\|Ga0157308_10354471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012985\|Ga0164308_10383984	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300013308\|Ga0157375_11389061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300014302\|Ga0075310_1061213	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300015371\|Ga0132258_11024811	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300015374\|Ga0132255_106242302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300017965\|Ga0190266_10545426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	688	Open in IMG/M
3300018000\|Ga0184604_10335887	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300018027\|Ga0184605_10219153	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300018066\|Ga0184617_1136987	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300018078\|Ga0184612_10173174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1125	Open in IMG/M
3300018422\|Ga0190265_10175301	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300018422\|Ga0190265_10648002	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300018422\|Ga0190265_10727821	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300018429\|Ga0190272_10039043	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300018466\|Ga0190268_12212204	Not Available	515	Open in IMG/M
3300019377\|Ga0190264_10552534	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300019377\|Ga0190264_11767690	Not Available	554	Open in IMG/M
3300019377\|Ga0190264_11958255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	535	Open in IMG/M
3300019377\|Ga0190264_12215786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300021090\|Ga0210377_10283993	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300021090\|Ga0210377_10791463	Not Available	513	Open in IMG/M
3300025885\|Ga0207653_10347327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	579	Open in IMG/M
3300025910\|Ga0207684_11147173	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300025912\|Ga0207707_10148236	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300025915\|Ga0207693_11112041	Not Available	600	Open in IMG/M
3300025937\|Ga0207669_10214135	All Organisms → cellular organisms → Bacteria → Proteobacteria	1409	Open in IMG/M
3300026089\|Ga0207648_11558647	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300026121\|Ga0207683_11828622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300027787\|Ga0209074_10375521	Not Available	589	Open in IMG/M
3300027897\|Ga0209254_10431362	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	969	Open in IMG/M
3300028381\|Ga0268264_12448296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	528	Open in IMG/M
3300028596\|Ga0247821_11271853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	502	Open in IMG/M
3300028608\|Ga0247819_10261530	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300028715\|Ga0307313_10039794	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300028716\|Ga0307311_10039594	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300028784\|Ga0307282_10539420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	566	Open in IMG/M
3300028787\|Ga0307323_10109521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	992	Open in IMG/M
3300028793\|Ga0307299_10103925	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300028803\|Ga0307281_10109151	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300028807\|Ga0307305_10068148	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300028807\|Ga0307305_10536081	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300028809\|Ga0247824_11072841	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300028828\|Ga0307312_11083065	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300028880\|Ga0307300_10045508	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300030006\|Ga0299907_10676579	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300030336\|Ga0247826_10174004	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300030336\|Ga0247826_10996786	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031547\|Ga0310887_11051389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	521	Open in IMG/M
3300031548\|Ga0307408_100365577	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300031562\|Ga0310886_11109268	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031716\|Ga0310813_12267294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300031854\|Ga0310904_10044984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2164	Open in IMG/M
3300031854\|Ga0310904_10232359	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300031901\|Ga0307406_10702395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	844	Open in IMG/M
3300031911\|Ga0307412_11891679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	550	Open in IMG/M
3300031911\|Ga0307412_12094741	Not Available	525	Open in IMG/M
3300032002\|Ga0307416_100983188	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300032002\|Ga0307416_101825224	Not Available	712	Open in IMG/M
3300032005\|Ga0307411_10311879	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300033413\|Ga0316603_10265613	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300033550\|Ga0247829_10569883	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300033811\|Ga0364924_073171	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.63%
Host-Associated	Host-Associated	18.52%
Engineered	Engineered	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.52%
Plants	Host-Associated → Plants	18.52%
Aquatic	Environmental → Aquatic	11.11%
Solid Waste	Engineered → Solid Waste	0.93%
Wastewater	Engineered → Wastewater	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.41%
Freshwater	Environmental → Aquatic → Freshwater	4.63%
Sediment	Environmental → Aquatic → Sediment	3.70%
Marine	Environmental → Aquatic → Marine	2.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.93%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Ice	Environmental → Aquatic → Freshwater → Ice	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00418770	2170459016	Switchgrass, Maize And Mischanthus Litter	MEVLHQGEGVGSVTSTLHLSLGLARAGFHVRFVCPPVEVEGGRSGGLDVHPS
ICCgaii200_08449823	2228664021	Soil	MRVMQVLHQGGGAGSVTSTLHLSVGLRRAGAEVVFVCPPGTEVEALATDGELTVRPLALRAGE
JGI11643J12802_100922621	3300000890	Soil	MRVMQVLHQGGGAGSVTSTLHLSVGLRRAGAEVVFVCPPGTEVEALATDGELTVRPLALRAGERRA
JGI10214J12806_100626824	3300000891	Soil	MATARSSRLPTVMQVLHQGGGAGSVTSTLHLSLGLARRGAGIRFVCPPDSEVEALARAGGLEVLPLAFRPGAR
JGI10214J12806_108742291	3300000891	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPNSEVERLARAGGLEVHPLSLE
JGI10216J12902_1066415691	3300000956	Soil	MRVMQVLHQGGGAGSVTSTLHLSVGLRRAGAEVVFVCPPGTEVEALATDGELTVRPLAL
JGI10216J12902_1165654472	3300000956	Soil	MSSPPIMQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLAVRPLDLV
C688J35102_1180933881	3300002568	Soil	MQVLHQGGGAGSVTSTLYLSLGLAKAGWDVRFVCPPDSEVEALARERGLAVRP
C688J35102_1198100961	3300002568	Soil	MQVLHQGGGAGSVTSTLYLSLGLAKAGWDVRFVCPPDSEVEALARERGLAVRTLVLPPH
Ga0055470_100182811	3300003992	Natural And Restored Wetlands	MQVLHQGGGAGSVASTLHLGLGLRRSGVDVVFVCPPGSEAEALAAGGGLTVVPLALEAGARRANAAALAQVVAGHRPCL
Ga0055467_100376311	3300003996	Natural And Restored Wetlands	MSSPAIMQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLTVRALALPPHSRRE
Ga0055467_101036471	3300003996	Natural And Restored Wetlands	MSSPTIMQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLTVRALALPPHSRRE
Ga0062589_1007439192	3300004156	Soil	MDSHPGQPGRPVKLRVMQVLHQGGGAGSVTSTLHLSLGLARAGLQVRFVCPPGSEVETLALAGGLEVHPLRLVARRERANGAALSALLASHP
Ga0063356_1052177332	3300004463	Arabidopsis Thaliana Rhizosphere	MSFRIMQVLHQGGGAGSVTSTLHLSIGLAKLGHHVLFVCPPDSEVDAGARQAGLDVRPLFLPPHARRKNA
Ga0062595_1005609812	3300004479	Soil	MTLRVLQVLHQGGGAGSVTSTLHLSLGLARAGVAIGFVCPPGSEVEGQARAAGLDVLP
Ga0062595_1021747202	3300004479	Soil	MATARSSRLPTVMQVLHQGGGAGSVTSTLHLSLGLARRGAAVRFVCPPDSEVEALARAGGLEVLP
Ga0062592_1022987542	3300004480	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPHSEVERLARAGGLEVHPVSLEPGARRANAAKLEDLLRRVPVDLVNA
Ga0062594_1033422231	3300005093	Soil	MQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLSVRPLALPAHSRR
Ga0070682_1009667981	3300005337	Corn Rhizosphere	MQVLHQGGGAGSVTSTLHLSLGLTQAGVHVRFVCPPHSEVEALAKAEGLEVHPLALEPKQRRENAAYLSALLQRHP
Ga0070669_1006426251	3300005353	Switchgrass Rhizosphere	MQVLHQGGGAGSVASTLHLSLGLEHAGFHVRFVCPPNSEVERLARAGGLEVHPLSLEPGARRANAAKLDDLLRRAPVD
Ga0070678_1018527061	3300005456	Miscanthus Rhizosphere	VAWSVMQVLHQGGGAGSVTSTLHLSLGLEQAGFHVRFVCPPHSEVEGLARAGGLEVH
Ga0070662_1018759452	3300005457	Corn Rhizosphere	VAGSVMQVLHQGGAAGSVASTLHLSLGLEHAGFHVRFVCPPNSEVERLARAGGLEVHPLSLEPGARRANAAKLDDLLRRAPVDLVNSQS
Ga0070681_105321841	3300005458	Corn Rhizosphere	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPNSEVERLARAGGLEVHPLSLEPGARRENAAKLDDLLRRAPV
Ga0070699_1018145322	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRILQVLHQGGGAGSVTSTLHLSLGLARRGVAVRFVCPPDSEVEALARAGGLEVLPLTLRPGARRGNAAALAALL
Ga0070695_1013184042	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VAGSVMQVLHQGGGAGSVASTLHLSLGLEHAGFHVRFVCPPNSEVERLARAGGLEVHPLSLEPGARR
Ga0070702_1000942771	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERLARAGGLEVHPVSLEPGARRVNAAKLEALLRR
Ga0068860_1015367672	3300005843	Switchgrass Rhizosphere	VTLSVMQVLHQGGGAGSVISTLHLSLGLARAGYHVRFVCPPGSEVEGLARAGGLEVHPIALAPS
Ga0075291_10416661	3300005884	Rice Paddy Soil	MPAIMQVLHQGGGAGSVTSTLHLSLGLARAGWDIRFVCPPDSEVEALARERGLAVRPLALPPHSRRENA
Ga0075284_10214171	3300005885	Rice Paddy Soil	MRVLQVLHQGGGAGSVTSTLHLSLGLARAGVDVRFACPPDSEVEHLARAGGLEVLPLALAPRARRRNAGALATL
Ga0075290_10105442	3300005889	Rice Paddy Soil	VTFPVMQVLHQGGGAGSVTSTLHLSLGLARSGFLVKFVCPPGSEVEGLARAGGLEVHPLR
Ga0075281_10670201	3300005897	Rice Paddy Soil	MTMRVLNVLHQGGGAGSVTSTLHLSLGLQRAGVAVRFACPPHSEVEALARAGGLEVHPLDLRPGERRANAAALAELL
Ga0075280_100816572	3300005904	Rice Paddy Soil	MTLRVLQVLHQGGGAGSVTSTLHLAAGLERAGVVVRFVCPPGSEVEALARGRGL
Ga0079215_110674212	3300006894	Agricultural Soil	MPMRVMQVLHQGGGAGSVASTLHLSLGLLRAGVEVIFVCPPGSEVEALAADACLTVRPA
Ga0105098_101375612	3300009081	Freshwater Sediment	MTLTVMQVLHQGGGAGSVTSTLHLSLGLARAGVRIRFVCPPDSEVEGLARGGGLEVFPLALEAGKRQANAAALSDL
Ga0126307_102201841	3300009789	Serpentine Soil	VHQGGGAGSVISTLHLSLGLARAGLRVRFVCPPESEVERLAREGGLEVHALTLLPYK
Ga0126307_106995451	3300009789	Serpentine Soil	MTLSVMQVLHQGGGAGSVSSTLHLSFGLARAGFHVRFVCPPGSEVAAMARAGGL
Ga0131092_106408742	3300009870	Activated Sludge	MGEREDTSVPLRVLLALHQGGGAGSVNSTLALGLGLRARGVDARLVCPPDSPVEAEARAG
Ga0126304_103088971	3300010037	Serpentine Soil	MTAPTVLQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCPPGSEVEGLARAAGLEV
Ga0126309_103715371	3300010039	Serpentine Soil	MQVLHQGGGAGSVTSTLHLSLGLARIGIHVRFVCPPDSEVETLARRGGLEVHPLRLHPRRHR
Ga0134126_127260382	3300010396	Terrestrial Soil	MQVLHQGGGAGSVTSTLHLSLGLTRAGVHVRFVCPPHSEVEALAKAEGLEVHPLALEPK
Ga0157216_101159692	3300012668	Glacier Forefield Soil	VHGGFNLGIFLSPMTLRVLQVLHQGGGAGSVTSTLHLALGLVRAGVAVPFVCPPGSEVEALARAGGLEVFP
Ga0157216_104572751	3300012668	Glacier Forefield Soil	MSTSVMQVLHQGGGAGSVTSTLHLSLGLASGGLHVRFVCPPGSEVEALARAGGLEVHPLALEPHRRRDN
Ga0136614_111084292	3300012684	Polar Desert Sand	VTLSSVLQVLHQGGGAGSVTSTLHLSLGLARAGLQVRFVCPPESEVESLARAGGLEVYPL
Ga0157308_103544712	3300012910	Soil	MSSPPIMQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLSVRPLALPAHSRREN
Ga0164308_103839841	3300012985	Soil	MTLRVLQVLHQGGGAGSVTSTLHLSLGLARAGVAVRFACPPDSEVGALAREGGLEVLP
Ga0157375_113890612	3300013308	Miscanthus Rhizosphere	VTLRTLQVLHQGHGTGAVISTLHLSIGLARAGTHVRFACPPASEVEALARRAGLEVHPLPLRPKSSRENARR
Ga0075310_10612132	3300014302	Natural And Restored Wetlands	MPLRIMQVLHQGGGAGSVASTLHLGLGLRRSGVDVVFVCPPGSEAEALAAGGGLTVVPLALEAGARRA
Ga0173483_101989582	3300015077	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPNSEVEQLARAGGLEVHPLSLEPGTRRANVAKLDDLLRRAPVDLVNSQS
Ga0132258_110248111	3300015371	Arabidopsis Rhizosphere	MTLRVLQVLHQGGGAGSVTSALHLSLGLAGAGVVVRFACPPGSEVEGLARAGGLDVIPVA
Ga0132255_1062423021	3300015374	Arabidopsis Rhizosphere	VLTVMQVLHQGGGAGSVTSTLYLSLGLARSGLTVRFVCPPNSEVEALARAGGLEVLPLALQPHERRENALKLRVM
Ga0190266_105454261	3300017965	Soil	MRVMQVLHQGGGAGSVTSTLHLSLGLQRAGIDVVFVCPPASEVQALAADWRLAVRSLELRPGA
Ga0184604_103358871	3300018000	Groundwater Sediment	MKPTVMQVLHQGGGAGSVTSTLHLSLGLARAGLQVRFVCPPGSEVEALARAGGLEVHPLRLLARQER
Ga0184605_102191532	3300018027	Groundwater Sediment	MTTVMEVLHQGEGVGAVTSTLHLSLGLARAGFHVRFVCPPGSEVEGLGRTGGLEVHPVALEPGRTPANAARL
Ga0184617_11369872	3300018066	Groundwater Sediment	VTNIMQVLHQGEGDGSVTSTLHLSLGLARAGFHVRFVCPPGSEVEGLARTGGLEVHPIALAPSGRVTN
Ga0184612_101731741	3300018078	Groundwater Sediment	MAMPTVMQVLHQGGNAGSVTSTLHLSLGLARAGWRVRFVCPPGSEVEALAREAGL
Ga0190265_101753011	3300018422	Soil	MQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCPPGSEVEALARAGGLEVHPLRLLA
Ga0190265_106480021	3300018422	Soil	MRVMQVLHQGGGAGSVTSTLHLSLGLQRAGVDVTFVCPPESEVEALATDGSLRVIPLPLAAGARRDNAS
Ga0190265_107278211	3300018422	Soil	MQVLHQGGGAGSVTSTLHLSLALRQAGVDVVFVCPPETEVEALASDGKLTVRPLALLPGQRRGNAAALAD
Ga0190272_100390431	3300018429	Soil	MQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCPPGSEVEALARAGGLEVHPLRLRA
Ga0190268_122122042	3300018466	Soil	MQVLHQGGGAGSVASTLHLSLGLQRSGADVVFVCPPASEVEALAAGGGLTVVPLALEAGERRANA
Ga0190264_105525341	3300019377	Soil	MKPTVMQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCLPGSEVEALALAGCLEVHPLRLHPRHERANGAALAGL
Ga0190264_117676902	3300019377	Soil	MTLTVMQVTHQGGGAGSVTSTLHLSLGLQRAGVQVHFVCPPGSEAEALACGGGLAVHPLDLRPGAHRDNAAGLA
Ga0190264_119582551	3300019377	Soil	MARPPSSRLPTVMQVLHQGGGAGSVTSTLHLALGLARRGAAVRFVCPPDSEVEALARAGGLEVLPLTLRPGA
Ga0190264_122157861	3300019377	Soil	MRVMQVLHQGGGAGSVTSTLYLSLGLRRAGVDVVFVCPPETEVEALAVDGRLAVRPLALQRGERRANAAALAELLAREE
Ga0210377_102839932	3300021090	Groundwater Sediment	MKPTVMQVLHQGGGAGSVTSTLHLSLGLARAGLHVRFVCPPGSEVEALARAGGLEVHPLRLLARQERANGAAL
Ga0210377_107914631	3300021090	Groundwater Sediment	MPLRILQVLHQGGGAGSVTSTLHLSLGLARRGVAVRFVCPPDSEVEALARAGGLEVLPLALRPGARHANAAALAA
Ga0207653_103473272	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPTIMQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLTVRAL
Ga0207684_111471732	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRILQVLHQGGGAGSVTSTLHLSLGLARRGAAVRFVCPPDSEVEALARAGGLEVLPLTLR
Ga0207707_101482363	3300025912	Corn Rhizosphere	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERLARAGGLEVHPVS
Ga0207693_111120411	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTLRVLQVLHQGGGAGSVTSTLHLSLGLARAGVAVRFACPPGSEVDALARAGGLEVLPIALRPGERRANAAALAA
Ga0207669_102141351	3300025937	Miscanthus Rhizosphere	VAGSVMQVLHQGGGAGSVASTLHLSLGLEHAGFHVRFVCPPNSEVERLARAGGL
Ga0207648_115586471	3300026089	Miscanthus Rhizosphere	MRVMQVLHQGGGAGSVMSTLHLSVGLQRAGIEVVFVCPPASEVQALAADWRLAVRSLELR
Ga0207683_118286222	3300026121	Miscanthus Rhizosphere	VTLRTLQVLHQGHGTGAVISTLHLSIGLARAGTHVRFACPPDSEVEALARRAGLEVHPLPLRP
Ga0209074_103755212	3300027787	Agricultural Soil	MTLRVLQVLHQGGGAGSVTSTLHLSLGLARAGVAIRFVCPPGSEVEGRARAAGLEVVPVALVSRGRRANAAALAAVLAD
Ga0209254_104313621	3300027897	Freshwater Lake Sediment	MRVLQVLQQGHGTGAVTSTLHLAIGLAQAGVHVRFACPPESEVAALAAAAGLEVHPVALQPKHHRRNAALLAELLEQ
Ga0268264_124482962	3300028381	Switchgrass Rhizosphere	VTLSVMQVLHQGGGAGSVISTLHLSLGLARAGYHVRFVCPPGSEVEGLARAGGLEVHPIALAPSGRRANAVKLAGL
Ga0247821_112718531	3300028596	Soil	VTLRTLQVLHQGHGTGAVISTLHLSIGLARAGTHVRFACPPDSEVEALARRAGLEVHP
Ga0247819_102615301	3300028608	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERRARAGGL
Ga0307313_100397943	3300028715	Soil	MTTVMQVLHQGGGAGSVTSTLHLSLGLARAGFHVRFVCPPGSEVEGRARAGGLEVHPIALASSGRLANATALAGFLN
Ga0307311_100395941	3300028716	Soil	MQVLHQGGGAGSVTSTLHLSLGLVRSGFHVRFVCPPDSEVEALARAGGLEVHPLRLVSG
Ga0307282_105394202	3300028784	Soil	MTTVMQVLHQGGGAGSVTSTLHLSLGLARAGFHVRFVCPPGSEVEGRARAGGLEVHPIALASSG
Ga0307323_101095211	3300028787	Soil	MQVLHQGGGAGSVTSTLHLSLGLVRSGFHVRFVCPPDSEVEALARAGGLEVHPLRLVSGQRRSNAAHLNSLIGRHPVELVNSQSAR
Ga0307299_101039251	3300028793	Soil	MQVLHQGEGDGSVISTLHLSLGLARRGFHVRFVCPPGSEVEGRARAGGLEVHPIAFSSRGRRANAATLAALLDRN
Ga0307281_101091511	3300028803	Soil	MPLRILQVLHQGGGAGSVTSTLHLSLGLARRGVAVRFVCPPDSEVEALARAGGLEVLPLALHP
Ga0307305_100681483	3300028807	Soil	MTTVMQVLHQGGGAGSVTSTLHLSLGLARAGFHVRFVCPPGSEVEGRARAGGLEVHPIALAS
Ga0307305_105360811	3300028807	Soil	MKPTVMQVLHQGGGAGSVTSTLHLSLGLARAGLQVRFVCPPGSEVEALARAGGLEVHPLRLLAREERANGAALAGLLAR
Ga0247824_110728412	3300028809	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERRARAGGLE
Ga0307312_110830651	3300028828	Soil	MQVLHQGGGAGSVTSTLHLSLGLVRSGFHVRFVCPPDSEVEALARAWGLEVHPLRLV
Ga0307300_100455082	3300028880	Soil	MQVLHQGGGAGSVTSTLHLSLGLARAGFHVRFVCPPGSEVEELARTGGLEVHPIALATSGRVTNAATLAAFLDCHP
Ga0299907_106765792	3300030006	Soil	MQVLHQGGGAGSVTSTLHLSLGLLRAGVEVIFVCPPGTEVEALAADGRLAVRP
Ga0247826_101740043	3300030336	Soil	MQVLHQGGGAGSVTSTLHLSLGLARTGWDVRFVCPPDSEVGALARERGLTVRPLALPPHSRRENAA
Ga0247826_109967862	3300030336	Soil	MSLRILQVLHQGGGAGSVTSTLHLALGLARAGVVVRFVCPPESEVESLARSGGLE
Ga0310887_110513892	3300031547	Soil	MQVLHQGGGAGSVTSTLHLSLGLARAGWDVRFVCPPDSEVEALARERGLSVRPLALPAHSRRENA
Ga0307408_1003655772	3300031548	Rhizosphere	MTLTVMQVTHQGGGAGSVTSALHLSLGLSRAGVQVRFVCPPGTEAEVLASGGGLDVHP
Ga0310886_111092682	3300031562	Soil	VLSVMQVLHQGGGAGSVTSTLYLSLGLARSGLTVRFVCPPNSEVEALARAGGLEVLPLALQPHERRENALKLR
Ga0310813_122672941	3300031716	Soil	MSPTVMQVLHQGGGAGSVLSTLHLSIGLVRAAIHVLFVCPPGSEVEGLARGAGLDVCPLTLDRGRRRA
Ga0310904_100449841	3300031854	Soil	MRVMQVLHQGGGAGSVTSTLHLSLGLQRAGIEVVFVCPPASEVQALAADWRLAVRSLELRPGARRANAAALAEIVAAERPD
Ga0310904_102323591	3300031854	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERLARAGGLEVHPVSLT
Ga0307406_105353022	3300031901	Rhizosphere	MPMRVMQVLHQGGGAGSVASTLHLSLGLLRAGVEVVFVCPPGTEVEALAADGCLTVRPVDLRPGARRANAAALAGIIARDRPALVN
Ga0307406_107023952	3300031901	Rhizosphere	MTTVLQVLHQGGGAGSVTSTLHLSLGLARLGMQVRFVCPPGSEVESLAKAGGLEVHPVLLLPHRRRRNAAALA
Ga0307412_118916791	3300031911	Rhizosphere	MTTVLQVLHQGGGAGSVTSTLHLSLGLARLGMQVRFVCPPGSEVESLAKAGGLEVHPVLLLPHRRRRNAAAL
Ga0307412_120947411	3300031911	Rhizosphere	MTLTVMQVTHQGGGAGSVTSALHLSLGLSRAGVQVRFVCPPGSEAEVLASGGDLDVHPLELRPGAAR
Ga0307416_1009831881	3300032002	Rhizosphere	MTLTVMQVTHQGGGAGSVTSALHLSLGLSRAGVQVRFVCPPGTEAEVLASGGGLDVHPLELRPGAARENAAALAGLLARHPVD
Ga0307416_1018252241	3300032002	Rhizosphere	MQVLHQGGGAGSVTSTLHLSIGLAKLGHHVLFVCPPDSEVEAGASQAGLDVR
Ga0307411_103118792	3300032005	Rhizosphere	MTLTVMQVTHQGGGAGSVTSALHLSLGLGRSGVQVRFVCPPGSEAEVLASGGGLEVHPLDLRPG
Ga0316603_102656131	3300033413	Soil	MRVLQVLQQGHGTGAVTSTLHLAIGLANSGVQVRFACPPESEVAALAAAAGLEVHPVALQPKHHRRNAALLAELLA
Ga0247829_105698831	3300033550	Soil	VAGSVMQVLHQGGGAGSVASTLHLSLGLEQAGFHVRFVCPPDSEVERRARAGGLEVHPVSLAPGARRANAAKLEALLRR
Ga0364924_073171_3_215	3300033811	Sediment	MAMPTVMQVLHQGGNAGSVTSALHLSLGLARTGWRVRFVCPPGSEVEALAQEAGLAVLPLQLHPHDHRRNA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089972

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign