Metagenome / Metatranscriptome Family F089949

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089949
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	72 residues
Representative Sequence	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFV
Number of Associated Samples	83
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.07 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.30 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.370 % of family members)
Environment Ontology (ENVO)	Unclassified (64.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 91.18% β-sheet: 0.00% Coil/Unstructured: 8.82%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07332	Phage_holin_3_6	2.78
PF12200	DUF3597	1.85
PF06078	DUF937	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.70 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.78 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.70 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	2.78 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.70 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	2.78 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0496224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10058026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	995	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1051848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10100290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300005332\|Ga0066388_101438997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1200	Open in IMG/M
3300005332\|Ga0066388_103300796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300005332\|Ga0066388_106024717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	612	Open in IMG/M
3300005363\|Ga0008090_10258913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	568	Open in IMG/M
3300005468\|Ga0070707_101353296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	678	Open in IMG/M
3300005713\|Ga0066905_100901651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	774	Open in IMG/M
3300005713\|Ga0066905_101640004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300005764\|Ga0066903_103013790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300005764\|Ga0066903_108207068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	534	Open in IMG/M
3300005764\|Ga0066903_109031346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300005841\|Ga0068863_101505809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300006935\|Ga0081246_1356821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300009100\|Ga0075418_12239033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300010043\|Ga0126380_10127780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1584	Open in IMG/M
3300010046\|Ga0126384_10327574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300010046\|Ga0126384_11298638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300010047\|Ga0126382_10555365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300010359\|Ga0126376_11442099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300010360\|Ga0126372_12657313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	552	Open in IMG/M
3300010366\|Ga0126379_11216690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	859	Open in IMG/M
3300010863\|Ga0124850_1032510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1669	Open in IMG/M
3300010868\|Ga0124844_1130466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300010868\|Ga0124844_1175332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	797	Open in IMG/M
3300012202\|Ga0137363_10253317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1431	Open in IMG/M
3300012361\|Ga0137360_10574897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300012948\|Ga0126375_10086247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1814	Open in IMG/M
3300012948\|Ga0126375_11274955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	616	Open in IMG/M
3300012960\|Ga0164301_11762465	Not Available	519	Open in IMG/M
3300012971\|Ga0126369_13637508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300016270\|Ga0182036_11497883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300016294\|Ga0182041_12259012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300016319\|Ga0182033_11772937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300016341\|Ga0182035_11600619	Not Available	587	Open in IMG/M
3300016357\|Ga0182032_11700336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300016371\|Ga0182034_11501669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300016387\|Ga0182040_11564869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300016387\|Ga0182040_11718505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300016422\|Ga0182039_11585034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M
3300016422\|Ga0182039_12090517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300020581\|Ga0210399_11332012	Not Available	564	Open in IMG/M
3300021073\|Ga0210378_10247208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300021441\|Ga0213871_10289571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300031544\|Ga0318534_10360074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	837	Open in IMG/M
3300031545\|Ga0318541_10874415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300031573\|Ga0310915_11033350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300031668\|Ga0318542_10743800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300031682\|Ga0318560_10059234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1906	Open in IMG/M
3300031713\|Ga0318496_10067438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1880	Open in IMG/M
3300031719\|Ga0306917_11495934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300031724\|Ga0318500_10594267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300031724\|Ga0318500_10723128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300031736\|Ga0318501_10580938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	614	Open in IMG/M
3300031740\|Ga0307468_101323443	Not Available	657	Open in IMG/M
3300031763\|Ga0318537_10047055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1559	Open in IMG/M
3300031765\|Ga0318554_10253580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1002	Open in IMG/M
3300031769\|Ga0318526_10301828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300031769\|Ga0318526_10365115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300031771\|Ga0318546_11199546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	533	Open in IMG/M
3300031777\|Ga0318543_10209244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	866	Open in IMG/M
3300031780\|Ga0318508_1004272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2896	Open in IMG/M
3300031781\|Ga0318547_10116287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1545	Open in IMG/M
3300031794\|Ga0318503_10041956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300031795\|Ga0318557_10032451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2120	Open in IMG/M
3300031796\|Ga0318576_10024476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2439	Open in IMG/M
3300031805\|Ga0318497_10159605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1237	Open in IMG/M
3300031845\|Ga0318511_10420130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	614	Open in IMG/M
3300031846\|Ga0318512_10533205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300031859\|Ga0318527_10268722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	725	Open in IMG/M
3300031860\|Ga0318495_10457383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300031880\|Ga0318544_10071038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M
3300031880\|Ga0318544_10270357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300031890\|Ga0306925_10322081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1661	Open in IMG/M
3300031890\|Ga0306925_11588518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	636	Open in IMG/M
3300031890\|Ga0306925_11616321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300031893\|Ga0318536_10085428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1568	Open in IMG/M
3300031910\|Ga0306923_11516832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300031941\|Ga0310912_10086872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2281	Open in IMG/M
3300031946\|Ga0310910_10520258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	944	Open in IMG/M
3300031947\|Ga0310909_10715032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831	Open in IMG/M
3300031947\|Ga0310909_11316912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300031954\|Ga0306926_11148709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300031954\|Ga0306926_12636304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	547	Open in IMG/M
3300032010\|Ga0318569_10540683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300032010\|Ga0318569_10569803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300032035\|Ga0310911_10230362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1058	Open in IMG/M
3300032044\|Ga0318558_10110501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300032051\|Ga0318532_10130911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	889	Open in IMG/M
3300032051\|Ga0318532_10310604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300032054\|Ga0318570_10490660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300032055\|Ga0318575_10069281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1660	Open in IMG/M
3300032055\|Ga0318575_10595657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300032059\|Ga0318533_10122382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1820	Open in IMG/M
3300032059\|Ga0318533_11418362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300032065\|Ga0318513_10151320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1107	Open in IMG/M
3300032066\|Ga0318514_10547528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	616	Open in IMG/M
3300032067\|Ga0318524_10723089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	525	Open in IMG/M
3300032091\|Ga0318577_10389828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300032180\|Ga0307471_102226958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	691	Open in IMG/M
3300032261\|Ga0306920_101458863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300032261\|Ga0306920_103069204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300032261\|Ga0306920_103338340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M
3300032261\|Ga0306920_103983663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300032261\|Ga0306920_104156614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	523	Open in IMG/M
3300033290\|Ga0318519_10061164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1920	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.30%
Host-Associated	Host-Associated	2.78%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.37%
Plants	Host-Associated → Plants	2.78%
Aquatic	Environmental → Aquatic	0.93%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.26%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.19%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006935	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_04962244	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAAL
AF_2010_repII_A1DRAFT_100580261	3300000597	Forest Soil	MFAALHSAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAV
AF_2010_repII_A100DRAFT_10518481	3300000655	Forest Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRYTALTGVLAGVAVLAALGAVIVGLIALHSWLAKQTGAFVAHGLIGGGLLLLALILFALALIRRRPRLAA
AF_2010_repII_A001DRAFT_101002902	3300000793	Forest Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRYTALTGVLAGVAVLAALGAVIVGLIALHSWLAKQTGAFVAHGLIGGGLLLLALILFALALIRRRPRLAARPPLQIAAR
Ga0066388_1014389971	3300005332	Tropical Forest Soil	MFAALRSAVRADIDRQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIA
Ga0066388_1033007961	3300005332	Tropical Forest Soil	MFAALRCAVRADIAQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGL
Ga0066388_1060247171	3300005332	Tropical Forest Soil	MFAALRSAVRADIDRQIGWAKDQVKLQTRYTALTGILAGVAALAALGAVVVGLIALHSWLAMQRGPSVAHGLIGGGLLLLALILFALALIRRRPRLAARPPLQITG
Ga0008090_102589132	3300005363	Tropical Rainforest Soil	MFAALRGAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAALGAVIVGLIALHSWVAMQTGP
Ga0070707_1013532961	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFAALMGAIHADIDRQIGWAKDQVKRQTRYTALMGILDGVASLAALGAVVVGLIALHSWLAMQTS
Ga0066905_1009016512	3300005713	Tropical Forest Soil	MFALLASAVRTDIDRQIAWAKHEVKRQTRYTVLMGILAGAAALAALGSVIVGLIALHSWLAVQTSPFIAHGMIGGGLLLFALILLA
Ga0066905_1016400041	3300005713	Tropical Forest Soil	MLVALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILAGVAALAALGAVIVGLIALHSW
Ga0066903_1030137903	3300005764	Tropical Forest Soil	MFAALRSAVRADIDRQFGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHS
Ga0066903_1082070681	3300005764	Tropical Forest Soil	MSVALRSAVRADIDRQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWL
Ga0066903_1090313462	3300005764	Tropical Forest Soil	MFAALRSAVRADIDRQIGWAKDQLKRQTRYTALTGVLAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAHGLIGGGLLLLALTFFALAFIRR
Ga0068863_1015058092	3300005841	Switchgrass Rhizosphere	MFAPLLDAIRTDIDRQIGWTKDQVRRQARYTAVILALAAVAHTR
Ga0081246_13568212	3300006935	Tropical Rainforest Soil	MFAALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQIGPFVAYGLIGGGL
Ga0075418_122390331	3300009100	Populus Rhizosphere	MFVPLLNAIRADIDRQIGWTKDQVRRQTRYTALIVALTGVAAVAALGAII
Ga0126380_101277801	3300010043	Tropical Forest Soil	MFAALRSAVSADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIALHSWLAVQTGPFVAHGLIGGGLLLLALIL
Ga0126384_103275743	3300010046	Tropical Forest Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGIRASVAALAALGAVIVGLIALHSWLAKQTGAFVAHGLIGGGLLLLALIL
Ga0126384_112986381	3300010046	Tropical Forest Soil	MFAALRSAVHADIDRQIYWAKDQVKRQTRYTALMGILAGVAALAALGAVTVGLIALHSWLAMQTGPFV
Ga0126382_105553651	3300010047	Tropical Forest Soil	MFVALRSAVRADIDRQIGWAKDQLKRQTRYTALTGILACVAALAALGAVIVG
Ga0126376_114420991	3300010359	Tropical Forest Soil	MSVALRSAVRADIDRQIGWAKDQLKRQTRHSALTGILAGVAALAAHGAVIVGLIAL
Ga0126372_126573131	3300010360	Tropical Forest Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVAVGLIALHSWLAMRA
Ga0126379_112166901	3300010366	Tropical Forest Soil	MFVALRSAVRADIDRQIGWAKDQLKRQTRYTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAHGLLGGGLMLLALILLSLALIRRRPRLAARPPLQIA
Ga0124850_10325104	3300010863	Tropical Forest Soil	MFAALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLVALHSWLAMQIGPFVAYGLIGGGLVLLALILFALALIPRRP
Ga0124844_11304663	3300010868	Tropical Forest Soil	MLAALRRALFADVDRQISWAKDQLKHQTRYTALTGMLAGVAALAALGAVIVGLIAFHSWLAMQTGP
Ga0124844_11753322	3300010868	Tropical Forest Soil	MLAALRRALFADVDRQISWAKDQLKHQTRYTALTGMLAGVAALAALGAVIVGLIAFHSWLAMQTGPFIAHGL
Ga0137363_102533174	3300012202	Vadose Zone Soil	MFAALMGAVRADIDRQIGWAKDQVKRQTAYTALIGILAGVAALAALGAVIVGLIALHSWLAMQ
Ga0137360_105748973	3300012361	Vadose Zone Soil	MFAALMGAVRADIDRQIGWAKDQVKRQTAYTALIGILAGVAALAALGAVIVGLIALHSWLAMQTSPFIAHGLIGGGLLLLALILFALAFIRRRPRLAVRPPLQIA
Ga0126375_100862471	3300012948	Tropical Forest Soil	VDAADALRSAVHADIDRQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVI
Ga0126375_112749552	3300012948	Tropical Forest Soil	MFAALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAKQTGPFVAHGLIGGGLLLLALTLFSLVLIRRRP
Ga0164301_117624652	3300012960	Soil	MFVALRSEVHADIDRQIGWAKDQVKRQTRHTALTGILAGVAWLAALGAVIVCLIALHSWVAMQTGSFVA
Ga0126369_136375081	3300012971	Tropical Forest Soil	MFVALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILTSVAVLAALGAVIVGLIALHSWLAMQTDALIAHGLIGGGLLLLALILF
Ga0182036_114978832	3300016270	Soil	MFAALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQIGPFVA
Ga0182041_122590121	3300016294	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALILFALALIR
Ga0182033_117729371	3300016319	Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRYTALTGILAGVAALVAVGAVIVGLIALHSWLAMQTGPFVAYGLIGGGL
Ga0182035_116006192	3300016341	Soil	MFAALLGAVRADIDRQIGWVKHEVKRQAGYTALVGTLAGVAALAILGAVVVGLIALHSWLATQIGPFAAHGLIGRG
Ga0182032_117003361	3300016357	Soil	MFVALRGAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQTGPFIAHGLIGGGLLLLALILFALTLIRRRPRLAARPPMQI
Ga0182034_115016692	3300016371	Soil	MFAALGSAVRADIDRQIGWAKDQVKRQTRYTALMGTLSGVAALAALGAIIVGLIALHSWLAMQIGPFVAYGL
Ga0182040_115648691	3300016387	Soil	MFVALRGAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVTVGL
Ga0182040_117185052	3300016387	Soil	MFAARRGAVHADIDRQIGWAKDQLKRQTRYTALIGILVGMPALAALSAVIVGLIALHSWLAMQTGPFVAHGLIAGGLLLLALI
Ga0182039_115850342	3300016422	Soil	MFAARRGAVHADIDRQIGWAKDQLKRQTRYTALIGILVGMPALAALSAVIVGLIALHSWLAMQTGPFVAHGLIAGGLLLLALILFALALIRRRPRLAARPPLQ
Ga0182039_120905171	3300016422	Soil	MFVALRGAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGL
Ga0210399_113320121	3300020581	Soil	MFVALRSAVHADIDRQIGWAKDQVKRQTRHTALTGILAGVAGLAALGAVIVGLI
Ga0210378_102472082	3300021073	Groundwater Sediment	MFAPLLDAVRADIDRQIDWAKGEVRHQTRHTALIGSLAVVAALAALG
Ga0213871_102895711	3300021441	Rhizosphere	MFAALRSAVRADIDRQIGWAKDQLKRQTRYTALMGILSGVAALAALGAVIVGLIALHSWLAMQIGPFVAYGLIGRG
Ga0318534_103600741	3300031544	Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRYTALMGILTGVAALAALGAVIVGLIALHSWLAMQTGPFVAHGLTGGGL
Ga0318541_108744152	3300031545	Soil	MFVALRGAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIA
Ga0310915_110333502	3300031573	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGL
Ga0318542_107438002	3300031668	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSWLAMRSGPFVAHGLIGGGL
Ga0318560_100592341	3300031682	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALILLA
Ga0318496_100674384	3300031713	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAHGLIGGGLLLLALILFALALIRRR
Ga0306917_114959342	3300031719	Soil	MFAALRGAVRADIDQQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQTGP
Ga0318500_105942671	3300031724	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAHGLIG
Ga0318500_107231281	3300031724	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFV
Ga0318501_105809381	3300031736	Soil	MFAALRSAVHADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAYGLMGGGLLLLALILFALAFIRRRPRLAARPPLQ
Ga0307468_1013234431	3300031740	Hardwood Forest Soil	MFVALRSAVHADIDRQIGWAKDQVKRQTRHTALTGILAGVAGLAALGAVIVGLIALHSWVAMQTGSFVAHGLIGGGLLLLALIFF
Ga0318537_100470554	3300031763	Soil	MFAALRSAVRADIDRQISWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIALHSWLAMQTGPFVAHGLIGGGLLLLALTFFALAFIRRRPLLAARPP
Ga0318554_102535803	3300031765	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALILFALALIRRRPRLAARPPLQIARPAALL
Ga0318526_103018281	3300031769	Soil	MFAALRSAVHADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAYGLMG
Ga0318526_103651151	3300031769	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFV
Ga0318546_111995462	3300031771	Soil	MFVALRGAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQIDPFVAYGLIGGGL
Ga0318543_102092441	3300031777	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSWLAMRSGPFV
Ga0318508_10042727	3300031780	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALILLALALIRRRPR
Ga0318547_101162874	3300031781	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIA
Ga0318503_100419563	3300031794	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAYGLIG
Ga0318557_100324511	3300031795	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALGAVIVGLIALHSWL
Ga0318576_100244761	3300031796	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFVAHGLIGGGL
Ga0318497_101596051	3300031805	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIALH
Ga0318511_104201302	3300031845	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALTALGAVTVGLIALHSWLAMQTGPFVAHGLIGGGLLLLAL
Ga0318512_105332051	3300031846	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLI
Ga0318527_102687222	3300031859	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALTALGAVTV
Ga0318495_104573832	3300031860	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALVGILAGVAALAALGAVTVGLI
Ga0318544_100710383	3300031880	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAM
Ga0318544_102703571	3300031880	Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWL
Ga0306925_103220811	3300031890	Soil	MFAARRGAVHADIDRQIGWAKDQLKRQTRYTALIGILVGMPALAALSAVIVGLIALHSWLAMQTGPFVAHGLIAGGLLLLALILFALALIRRRP
Ga0306925_115885182	3300031890	Soil	MFAALRSAVHADIDRQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLMALHSWLAMQTG
Ga0306925_116163212	3300031890	Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRYTALIGILAAVAALAALGAVIVGLIALHSWLAMQTGPFIAHGLIGGGLLLLALILFAL
Ga0318536_100854284	3300031893	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALGAVIVGLIALHSWLAMQTGPFVAYGLI
Ga0306923_115168321	3300031910	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRYTALMGILVGVAALAALGAVIVGLIALHSWLATQTGPFVAYGLIGGGLVLLALILFALALI
Ga0310912_100868721	3300031941	Soil	MFAARRGAVHADIDRQIGWAKDQLKRQTRYTALIGILVGMPALAALSAVIVGL
Ga0310910_105202581	3300031946	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAHGLIGGG
Ga0310909_107150321	3300031947	Soil	MFAALRSAVRADIDRQISWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIALHSWLAMQTGPFVAHGLIGGGLLLLALTFFALAFIRRRPRLAARPPLQIARPAAL
Ga0310909_113169122	3300031947	Soil	MFAALRSAVRADIDRQIGWAKDQLKRQTRYTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAHGLIGGGLVLLALILFALAFIRRRPRLAA
Ga0306926_111487091	3300031954	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAFHSWLAMQTGPF
Ga0306926_126363042	3300031954	Soil	MFAALRGAVRADIDQQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAHGLIGGG
Ga0318569_105406832	3300032010	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIAF
Ga0318569_105698031	3300032010	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALMGILACVAALAALGAVIVGLIALHSWLAMQT
Ga0310911_102303621	3300032035	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGTLAGVAALAALGAVTVGLIAFHSWLAMQTGPFVAY
Ga0318558_101105013	3300032044	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRYTALTGTLAGVATLAALGAVIVGLFALHSWLAM
Ga0318532_101309111	3300032051	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVT
Ga0318532_103106041	3300032051	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALILFALALIRRRPRLA
Ga0318570_104906602	3300032054	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALI
Ga0318575_100692811	3300032055	Soil	MFAALRSAVRADIDRQISWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLI
Ga0318575_105956572	3300032055	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAYGLIGGGLLLLALILLS
Ga0318533_101223824	3300032059	Soil	MFAALRGAVRADIDQQIGWAKDQVKRQTRYTALMGILAGVAALAALGAVIVGLIALHSW
Ga0318533_114183621	3300032059	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRYTALMGILVGVAALAALGAVIVGLIALHSWLATQTGPVVAYGL
Ga0318513_101513203	3300032065	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIV
Ga0318514_105475281	3300032066	Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRYTAVMGILAGVGALAALGAIIVGLIALHSWLAMQTGPFVAHGLIGGGLLLLALI
Ga0318524_107230892	3300032067	Soil	MFAALRCAVRADIDRQIGWAKDQVKRQTRYTALMAILAGVAALAGLGAVIVGLIALHSW
Ga0318577_103898281	3300032091	Soil	MFAALRSAVHADIDRQIGWAKDQLKRQTRHTALTGILACAAALAALDAVIVGLIALHSWLAMRSGPFVAHGLIGGGLLLLALIL
Ga0307471_1022269582	3300032180	Hardwood Forest Soil	MFAALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAAFGAVIVG
Ga0306920_1014588633	3300032261	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVIVGLIALHSWLAMQTGPFVAHGLIGGG
Ga0306920_1030692041	3300032261	Soil	MLAALRSAVRADIDRQIGWAKDQLKRQTRYTALTGILACVAALAALGAVIVGLIALHSW
Ga0306920_1033383402	3300032261	Soil	MFAALRSAVRADIDQQIGWAKDQLKRQTRYTALMGILAGVAALAALGAVIVGLIALHSWLAMQIGPFVAYGLIGG
Ga0306920_1039836631	3300032261	Soil	MFAAQRRAVRADIDQQIGWAKDQLKRQTRYTALVGILAGVAALAALGAVIVGLIALHSWLAMQIGPFVAYGLIGG
Ga0306920_1041566142	3300032261	Soil	MFAALLGAVRADIDRQIGWAKHEVKRQAGHTALVGILAGVAALATLGAVVGGLIALHSWRAVQIG
Ga0318519_100611644	3300033290	Soil	MFVALRSAVRADIDRQIGWAKDQVKRQTRHTALTGILAGVAALAALGAVTVGLIALHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089949

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences