Metagenome / Metatranscriptome Family F089933

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089933
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	66 residues
Representative Sequence	MPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG
Number of Associated Samples	73
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	34.26 %
% of genes near scaffold ends (potentially truncated)	37.04 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (55.556 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (49.074 % of family members)
Environment Ontology (ENVO)	Unclassified (86.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.037 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98 1B570J40625_1016769872 2JGI25908J49247_100160445 3JGI25908J49247_100273601 4JGI25908J49247_101032221 5JGI25908J49247_101224921 6JGI25910J50241_100140934 7JGI25909J50240_10072523 8JGI25920J50251_100791621 9JGI25911J50253_101907983 10JGI25912J50252_100292732 11JGI25926J51410_10081957 12JGI25925J51416_100185637 13JGI25925J51416_100891201 14JGI25928J51866_10475241 15Ga0066181_100978802 16Ga0007760_112213182 17Ga0070374_101859163 18Ga0070374_102219241 19Ga0070374_104390503 20Ga0070374_105459973 21Ga0049083_100610913 22Ga0049081_100215502 23Ga0049081_100544513 24Ga0049081_101026373 25Ga0049080_100065998 26Ga0049080_100141787 27Ga0049080_100243352 28Ga0103958_11322648 29Ga0114347_100714415 30Ga0114355_101296812 31Ga0114880_10222221 32Ga0114980_102944122 33Ga0114968_105635291 34Ga0114978_106096982 35Ga0114975_101634213 36Ga0133913_112110221 37Ga0119955_11294583 38Ga0153799_10075106 39Ga0153801_10745582 40Ga0164293_108986181 41Ga0172367_101776952 42Ga0181364_10356524 43Ga0181364_10534333 44Ga0181362_10250193 45Ga0181362_10425751 46Ga0181365_10105811 47Ga0181365_10717491 48Ga0181356_10719854 49Ga0181356_11482311 50Ga0181356_11609093 51Ga0181358_12094462 52Ga0181358_12471161 53Ga0181357_11378743 54Ga0181357_11697601 55Ga0181346_10280181 56Ga0181346_13033821 57Ga0181355_11384881 58Ga0181359_10486952 59Ga0181359_10682162 60Ga0181359_10865891 61Ga0181359_11979662 62Ga0211726_109798173 63Ga0211729_103371015 64Ga0211729_108365231 65Ga0211729_109929611 66Ga0194115_1002569610 67Ga0194115_101975681 68Ga0181354_11362763 69Ga0181354_12117592 70Ga0196905_10566033 71Ga0214917_1000183520 72Ga0214919_100643164 73Ga0214919_100680545 74Ga0214919_101618465 75Ga0209552_10017665 76Ga0209552_10154882 77Ga0208966_10521363 78Ga0208974_10065227 79Ga0208951_10405413 80Ga0209357_11409552 81Ga0208975_10237048 82Ga0209553_10915781 83Ga0209443_10735894 84Ga0209188_10248952 85Ga0209355_10559677 86Ga0209355_10986682 87Ga0209296_10206031 88Ga0209296_14015711 89Ga0209768_103472203 90Ga0209768_104180541 91Ga0209500_100629315 92Ga0209500_103458422 93Ga0209246_100974961 94Ga0209246_101038393 95Ga0209354_101873471 96Ga0209400_12318202 97Ga0119944_10137012 98Ga0119945_10353902 99Ga0315291_115311371 100Ga0315907_100967024 101Ga0315907_107816381 102Ga0315290_103583571 103Ga0315909_1000185336 104Ga0315285_104083643 105Ga0315274_110832713 106Ga0315906_101984554 107Ga0335056_0729280_3_167 108Ga0335060_0618104_253_471
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98 1B570J40625_1016769872 2JGI25908J49247_101032221 3JGI25908J49247_101224921 4Ga0070374_102219241 5Ga0070374_104390503 6Ga0070374_105459973 7Ga0114355_101296812 8Ga0119955_11294583 9Ga0153801_10745582 10Ga0164293_108986181 11Ga0172367_101776952 12Ga0181356_11482311 13Ga0181358_12471161 14Ga0181357_11378743 15Ga0181346_10280181 16Ga0214919_101618465 17Ga0119945_10353902 18Ga0315909_1000185336
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1Ga0070374_101859163 2B570J40625_1016769872 3JGI25908J49247_101032221 4Ga0049080_100243352 5Ga0103958_11322648 6Ga0114347_100714415 7Ga0114978_106096982 8Ga0119955_11294583 9Ga0164293_108986181 10Ga0172367_101776952 11Ga0181356_11482311 12Ga0181357_11378743 13Ga0181346_10280181 14Ga0181359_10865891 15Ga0194115_1002569610 16Ga0194115_101975681 17Ga0196905_10566033 18Ga0214919_100643164 19Ga0214919_100680545 20Ga0209355_10986682 21Ga0119945_10353902 22Ga0335060_0618104_253_471
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.37% β-sheet: 16.85% Coil/Unstructured: 79.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02467	Whib	12.96
PF08281	Sigma70_r4_2	7.41
PF07659	DUF1599	3.70
PF12850	Metallophos_2	1.85
PF09723	Zn-ribbon_8	1.85
PF12224	Amidoligase_2	0.93
PF00310	GATase_2	0.93
PF13230	GATase_4	0.93

Showing 1 to 8 of 8 entries

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.63 %
Unclassified	root	N/A	1.85 %
Viruses	superkingdom	All Organisms → Viruses	93.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	55.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	55.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	55.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	55.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	11.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	38.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.63 %
Freshwater phage uvFW-CGR-AMD-COM-C203	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C203	38.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	37.96 %
Unclassified	root	N/A	1.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11.11 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300013126\|Ga0172367_10177695	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1367	Open in IMG/M
3300002835\|B570J40625_101676987	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300003277\|JGI25908J49247_10016044	All Organisms → Viruses → Predicted Viral	2282	Open in IMG/M
3300003277\|JGI25908J49247_10027360	All Organisms → Viruses → Predicted Viral	1641	Open in IMG/M
3300003277\|JGI25908J49247_10103222	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300003277\|JGI25908J49247_10122492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C203	615	Open in IMG/M
3300003388\|JGI25910J50241_10014093	All Organisms → Viruses → Predicted Viral	2845	Open in IMG/M
3300003393\|JGI25909J50240_1007252	All Organisms → Viruses → Predicted Viral	2758	Open in IMG/M
3300003404\|JGI25920J50251_10079162	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C203	791	Open in IMG/M
3300003411\|JGI25911J50253_10190798	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.07%
Marine	Environmental → Aquatic → Marine	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.85%
Lake	Environmental → Aquatic → Freshwater → Lake	33.33%
Lentic	Environmental → Aquatic → Freshwater → Lentic	60.19%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.70%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	59.26%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	1.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.48%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	49.07%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.19%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.70%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.19%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.70%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1016769872	3300002835	Freshwater	MPNYDFKCNDCGNTREQFIYHKDYEKYVVRCPTLNCNKVMERVYTVPGIKFKGPGFYSTGG*
JGI25908J49247_100160445	3300003277	Freshwater Lake	VLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG*
JGI25908J49247_100273601	3300003277	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYEIMERVYTVPGIKFNGPGFYSTGG*
JGI25908J49247_101032221	3300003277	Freshwater Lake	MPTYDFLCPICGNTREQFIHHKEYEGYIVRCPTLDCNKPMKRIYSVPAVKFNGPGFYSTGG*
JGI25908J49247_101224921	3300003277	Freshwater Lake	VLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG*
JGI25910J50241_100140934	3300003388	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
JGI25909J50240_10072523	3300003393	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYEIMERVYTVPGIKFNGPGFYSTGG*
JGI25920J50251_100791621	3300003404	Freshwater Lake	MWSMEVLGEERLVLVPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
JGI25911J50253_101907983	3300003411	Freshwater Lake	MQSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG*
JGI25912J50252_100292732	3300003412	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCLTLNCYEIMERVYTVPGIKFNGPGFYSTGG*
JGI25926J51410_10081957	3300003490	Freshwater Lake	MWSMEVLAEERLVLVPNYDFKCNTCGSTREQFIHHKDYEEYIVRCLTLDCYKIMERVYTVPGIKFNGPGFYSTGG*
JGI25925J51416_100185637	3300003497	Freshwater Lake	MPNYDFKCNTCGGTXEQFIHHKDYEEYIVRCXTLNXYXIMERVYTVPGIKFNGPGFYS
JGI25925J51416_100891201	3300003497	Freshwater Lake	NYDFKCNTCGSTREQFIHHKDYEEYIVRCLTLDCYKIMERVYTVPGIKFNGPGFYSTGG*
JGI25928J51866_10475241	3300003616	Freshwater Lake	FKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
Ga0066181_100978802	3300004123	Freshwater Lake	MRSMEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG*
Ga0007760_112213182	3300004793	Freshwater Lake	MQSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG*
Ga0070374_101859163	3300005517	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
Ga0070374_102219241	3300005517	Freshwater Lake	MHGMEVSPEEGLVLVPSYDFKCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPA
Ga0070374_104390503	3300005517	Freshwater Lake	KCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPAVKFNGSGFYSTGG*
Ga0070374_105459973	3300005517	Freshwater Lake	GLYNLQIQNPMWSMEVLGEKRLVLMPNYDFKCNTCGSTREQFIHHKDYEKYIVRCLTLDCYKPMQRIYTVPAVKFNGSGFYSTGG*
Ga0049083_100610913	3300005580	Freshwater Lentic	MWSMEVLAEERLVLVPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
Ga0049081_100215502	3300005581	Freshwater Lentic	MWSMEVLGEERLVLVPNYDFKCNTCGATREQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTGG*
Ga0049081_100544513	3300005581	Freshwater Lentic	MQGMEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG*
Ga0049081_101026373	3300005581	Freshwater Lentic	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCLTLNCYKIMERVYTVPGIKFNGPGFYSTGG*
Ga0049080_100065998	3300005582	Freshwater Lentic	MQSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIYHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG*
Ga0049080_100141787	3300005582	Freshwater Lentic	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTGG*
Ga0049080_100243352	3300005582	Freshwater Lentic	VPNYDFKCNTCGATREQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTGG*
Ga0103958_11322648	3300007212	Freshwater Lake	MPTYEFICPICGTIREQFIYHKDYEGYIVRCPKLGCNKPMDRLYSAPAIKFKGTGFYSTGG*
Ga0114347_100714415	3300008114	Freshwater, Plankton	MPNYDFKCMCGSTREVFIYHKDYEKYIVRCDKCYQPMERVYTVPGIKFKGPGFYSTGG*
Ga0114355_101296812	3300008120	Freshwater, Plankton	MPNYDFKCACGSTREVFIYHKDYEKYIVRCDKCYQPMERVYTVPGIKFKGPGFY
Ga0114880_10222221	3300008450	Freshwater Lake	YDFKCNDCGNTREQFIYHKDYEKYVVRCPTLNCNKVMERVYTVPGIKFKGPGFYSTGG*
Ga0114980_102944122	3300009152	Freshwater Lake	MPNYDFKCNDCGSTREQFIYHKDYEKYVVRCPTLNCNKPMERVYTVPGIKFKGPGFYSTGG*
Ga0114968_105635291	3300009155	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEKYVVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTGG*
Ga0114978_106096982	3300009159	Freshwater Lake	MPTYDFKCNTCGGTREVFIHHKEYEKYVVRCDTLDCYKPMERIFSAPAIKFNGSGFYSTGG*
Ga0114975_101634213	3300009164	Freshwater Lake	MWSMEVLGEERLVLVPNYDFKCNTCGATREQFIHHKDYEKYIVRCLTLDCYKPMQRVYTVPAVKFNGPGFYSTGG*
Ga0133913_112110221	3300010885	Freshwater Lake	TCGAMREVFIHHKEYETYIVRCEVDYKPMERVYSAPPAIKFNGTGFYSTGG*
Ga0119955_11294583	3300012006	Freshwater	MPNYDFKCLTCGAMREVFIHHKEYEKYIVRCEVDYKPMERVYPEPPAIKFNGTGFYST
Ga0153799_10075106	3300012012	Freshwater	MEVLAEKWMVLVPNYDFKCNTCGNTREQFIYHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG*
Ga0153801_10745582	3300012017	Freshwater	KCNTCGGTREQFIHHKDYEEYIVRCLTLNCYEIMERVYTVPGIKFNGPGFYSTGG*
Ga0164293_108986181	3300013004	Freshwater	TNTCTKADRQGIRLYYAQVWHSLYGLEASLKERVVLVPNYDFRCGTCGATREVFIHHKDYEKYIVRCEVDYKPMERVFSAPAIKFNGTGFYSTGG*
(restricted) Ga0172367_101776952	3300013126	Freshwater	MPTYEFICLICDVTREQFIYHKDYEGYIVRCPELGCNKPMDRLYTPPAIRFKGTGFYSTGG*
Ga0181364_10356524	3300017701	Freshwater Lake	FKCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPAIKFNGSGFYSTGG
Ga0181364_10534333	3300017701	Freshwater Lake	FKCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPAVKFNGSGFYSTGG
Ga0181362_10250193	3300017723	Freshwater Lake	MWSMEVLGEERLVLMPNYDFKCNTCGSTREQFIHHKDYEEYIVRCLTLDCYKIMERVYTVPGIKFNGPGFYSTGG
Ga0181362_10425751	3300017723	Freshwater Lake	MEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG
Ga0181365_10105811	3300017736	Freshwater Lake	MHGMEVSSEEGLVLVPSYDFKCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERIFSAPAIKFNGSGFYSTGG
Ga0181365_10717491	3300017736	Freshwater Lake	NYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYEIMERVYTVPGIKFNGPGFYSTGG
Ga0181356_10719854	3300017761	Freshwater Lake	EVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0181356_11482311	3300017761	Freshwater Lake	VSSAEGLVLMPSYDFKCGTCGATREVFIYHKEYEKYIVRCEVDYKPMERVYSSPPAIKFNGSGFYSTGG
Ga0181356_11609093	3300017761	Freshwater Lake	CGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPAVKFNGSGFYSTGG
Ga0181358_12094462	3300017774	Freshwater Lake	AMRSMEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG
Ga0181358_12471161	3300017774	Freshwater Lake	MWSMEVLGEERLVLVPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYST
Ga0181357_11378743	3300017777	Freshwater Lake	GVFCGNTREQFIHHKDYEKYVVRCPTLDCNKPMKRIYTVPAVKFKGSGFYSTGG
Ga0181357_11697601	3300017777	Freshwater Lake	IYYTQIRNTMHGMEVSSAEGLVLMPSYDFKCGTCGATREVFIHHKEYEKYIVRCEVDYKPMERVYSSPPAIKFNGSGFYSTGG
Ga0181346_10280181	3300017780	Freshwater Lake	DYPQIRDTMHGMEVSSEEGLVLVPSYDFKCSTCGATREVFIHHKEYEKYIVRCEVDYKPMERIFSAPAIKFNGSGFYSTGG
Ga0181346_13033821	3300017780	Freshwater Lake	MWSMEVLAEERLVLVPNYDFKCNTCGGTREQFIHHKDYEEYIVRCLTLDCYEIMERVYTVPGIKFNGPGFYSTGG
Ga0181355_11384881	3300017785	Freshwater Lake	KWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0181359_10486952	3300019784	Freshwater Lake	MHGMEVSSVEGLVLMPSYDFKCGTCGATREVFIHHKEYEKYIVRCEVDYKPMERVYSSPPAIKFNGSGFYSTGG
Ga0181359_10682162	3300019784	Freshwater Lake	MWSMEVLAEERLVLVPNYDFKCNTCGSTREQFIHHKDYEEYIVRCLTLDCYKIMERVYTVPGIKFNGPGFYSTGG
Ga0181359_10865891	3300019784	Freshwater Lake	GSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0181359_11979662	3300019784	Freshwater Lake	MWSMEVLGEERLVLVPNYDFKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG
Ga0211726_109798173	3300020161	Freshwater	MPNYDFKCNTCGATKEQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTG
Ga0211729_103371015	3300020172	Freshwater	MPTYDFLCPICGNTREQFIHHKEYEGYIVRCPTLDCNKPMKRIYSVPAVKFNGPGFYSTG
Ga0211729_108365231	3300020172	Freshwater	MEVLAEKWLVLVPNYDFKCNTCGNTREQFIYHKDYEGYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0211729_109929611	3300020172	Freshwater	NTCGATKEQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTGG
Ga0194115_1002569610	3300020183	Freshwater Lake	VPTYEFLCPICGTTREQFIYHKDYEGYIVRCPKLGCNKPMDRLYTPPAIRFKGTGFYSTG
Ga0194115_101975681	3300020183	Freshwater Lake	MQSMEILAKKWLVLMPNYIFKCNTCGNTREQFIYHKDYERYIVRCPTLDCNEPMKRTYTAPGIKFNGPGFYSTGG
Ga0181354_11362763	3300022190	Freshwater Lake	MQSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0181354_12117592	3300022190	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTG
Ga0196905_10566033	3300022198	Aqueous	MPTYEFMCPICKTTREQFIYHKDYEYYIVRCPKLNCNEPMDRIYSAPAVKFKGTGFYSTG
Ga0214917_1000183520	3300022752	Freshwater	MPNYDFKCMCGSTREVFIYHKDYEKYVVRCDKCYQPMERVYTVPGIKFKGPGFYSTGG
Ga0214919_100643164	3300023184	Freshwater	MHGMEVPPKKGLVLMPTYDFKCGTCGATREVFIHHKEYEKYVVRCAVDYKIMERVYSAPPAIKFNGSGFYSTGG
Ga0214919_100680545	3300023184	Freshwater	MPTYDFKCKTCGATREVFIYHKDYETYIVRCEVDYKPMERIFSAPAIKFNGSGFYSTGG
Ga0214919_101618465	3300023184	Freshwater	REVFIHHKEYEKYIVRCEIDYKPMERVYSAPPAIRFNGTGFYSTGG
Ga0209552_10017665	3300027563	Freshwater Lake	MHGMEVSPEEGLVLVPSYDFKCGTCGATREVFIHHKEYEKYIVRCEVDYKPMERVFSAPAIKFNGSGFYSTGG
Ga0209552_10154882	3300027563	Freshwater Lake	MVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0208966_10521363	3300027586	Freshwater Lentic	QGNRLYNPPIQHTMQSMEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG
Ga0208974_10065227	3300027608	Freshwater Lentic	MEVLAEKWMVLVPNYDFKCNTCGNTREQFIYHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0208951_10405413	3300027621	Freshwater Lentic	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCLTLNCYEIMERVYTVPGIKFNGPGFYSTG
Ga0209357_11409552	3300027656	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYEIMERVYTVPGIKFNGPGFYSTG
Ga0208975_10237048	3300027659	Freshwater Lentic	VPNYDFKCNTCGATREQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTG
Ga0209553_10915781	3300027688	Freshwater Lake	FKCNTCGGTREQFIHHKDYEKYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYSTGG
Ga0209443_10735894	3300027707	Freshwater Lake	KCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0209188_10248952	3300027708	Freshwater Lake	MPNYDFKCNDCGNTREQFIYHKDYEKYVVRCPTLNCNKVMERVYTVPGIKFKGPGFYSTG
Ga0209355_10559677	3300027744	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEEYIVRCSTLNCYKIMERVYTVPGIKFNGPGFYS
Ga0209355_10986682	3300027744	Freshwater Lake	MPTYEFKCFDCGNTREQFIYQEQYEKYVVRCPTLDCNKPMKRIYSAPAVKFNGTGFYSTG
Ga0209296_10206031	3300027759	Freshwater Lake	MWSMEVLGEERLVLMPNYDFKCNTCGSTREQFIHHKDYEKYIVRCLTLDCYKPMQRVYTVPAVKFNGPGFYSTGG
Ga0209296_14015711	3300027759	Freshwater Lake	MWSMEVLGEERLVLVPNYDFKCNTCGATREQFIHHKDYEKYIVRCPTLDCYKPMQRVYTVPAVKFNGPGFYSTGG
Ga0209768_103472203	3300027772	Freshwater Lake	MWSMEVLGEKRLVLMPNYDFKCNTCGSTREQFIHHKDYEKYIVRCLTLDCYKPMQRIYTVPAVKFNGSGFYSTGG
Ga0209768_104180541	3300027772	Freshwater Lake	QHTMRSMEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG
Ga0209500_100629315	3300027782	Freshwater Lake	MPNYDFKCNDCGSTREQFIYHKDYEKYVVRCPTLNCNKPMERVYTVPGIKFKGPGFYSTG
Ga0209500_103458422	3300027782	Freshwater Lake	MPTYDFKCNTCGGTREVFIHHKEYEKYVVRCDTLDCYKPMERIFSAPAIKFNGSGFYSTG
Ga0209246_100974961	3300027785	Freshwater Lake	EKWMVLVPNYDFKCNTCGNTREQFIYHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0209246_101038393	3300027785	Freshwater Lake	MQGMEILAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPAVKFNGPGFYSTGG
Ga0209354_101873471	3300027808	Freshwater Lake	MEVLAEKWMVLVPNYDFKCNTCGNTREQFIHHKDYERYVVRCPTLDCNKPMERVYTVPGIKFNGPGFYSTGG
Ga0209400_12318202	3300027963	Freshwater Lake	MPNYDFKCNTCGGTREQFIHHKDYEKYVVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTG
Ga0119944_10137012	3300029930	Aquatic	MPTYEFICPICGTTREQFIYHKDYETYIVRCPTLGCNLPMERVYSVPAIKFKGPGFYSTG
Ga0119945_10353902	3300029933	Aquatic	ESKSKRVKGQIIPTYEFKCANCGNTREQFIYHKDYETYIVRCPTLGCNLPMERVYSVPAIKFKGPGFYSTGG
Ga0315291_115311371	3300031707	Sediment	MEVLGEERLVLMPNYDFKCNTCGGTREQFIHHKDYEKYVVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTGG
Ga0315907_100967024	3300031758	Freshwater	MPNYDFKCMCGSTREVFIYHKDYEKYIVRCDKCYQPMERVYTVPGIKFKGPGFYSTGG
Ga0315907_107816381	3300031758	Freshwater	MPNYDFKCACGSTREVFIYHKDYEKYIVRCDKCYQPMERVYTVPGIKFKGPGFYSTGG
Ga0315290_103583571	3300031834	Sediment	MWSMEVLGEERLVLMPNYDFKCNTCGGTREQFIHHKDYEKYVVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTGG
Ga0315909_1000185336	3300031857	Freshwater	MPTYDFKCSKCGATREVFIHHKEYEKYVVRCDTLNCYKPMERIFSAPAIKFNGSGFYSTG
Ga0315285_104083643	3300031885	Sediment	MWSVEVLGEERLVLMPNYDFKCNTCGGTREQFIHHKDYEKYVVRCSTLDCYKIMERVYTVPGIKFKGPGFYSTGG
Ga0315274_110832713	3300031999	Sediment	MPNYDFKCNTCGSTREQFIHHKDYEKYIVRCSTLDCYKPMQRVYTVPAVKFNGPGFYSTG
Ga0315906_101984554	3300032050	Freshwater	LVLMPNYDFKCACGSTREVFIYHKDYEKYIVRCDKCYQPMERVYTVPGIKFKGPGFYSTG
Ga0335056_0729280_3_167	3300034120	Freshwater	CATCGKTREQFIYHKDYETYIVRCPTLNCNKPMERVYSVPAIKFNGPGFYSTGG
Ga0335060_0618104_253_471	3300034122	Freshwater	MEILAEKWMVLVPNYEFKCATCGKTREQFIYHKDYETYIVRCPTLNCNKPMERVYSVPAIKFNGPGFYSTGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters