Metagenome / Metatranscriptome Family F089878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	100 residues
Representative Sequence	MKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Number of Associated Samples	78
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.81 %
% of genes near scaffold ends (potentially truncated)	43.52 %
% of genes from short scaffolds (< 2000 bps)	87.96 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.370 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (57.407 % of family members)
Environment Ontology (ENVO)	Unclassified (58.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.13% β-sheet: 0.00% Coil/Unstructured: 33.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF16385	DUF4994	12.04
PF00731	AIRC	8.33
PF00884	Sulfatase	8.33
PF07882	Fucose_iso_N2	8.33
PF12158	DUF3592	6.48
PF13529	Peptidase_C39_2	3.70
PF07881	Fucose_iso_N1	3.70
PF01625	PMSR	2.78
PF04773	FecR	0.93
PF03781	FGE-sulfatase	0.93
PF13646	HEAT_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	12.04
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	2.78
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
All Organisms	root	All Organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
cellular organisms	root	All Organisms → cellular organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.70 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	19.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	8.33 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	7.41 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	7.41 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	4.63 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.85 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
unclassified Lentisphaeria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria	7.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	7.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4.63 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.85 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	7.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4.63 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.85 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.93 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	7.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4.63 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.85 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.93 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	7.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	4.63 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.85 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	0.93 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10049828	Not Available	1858	Open in IMG/M
3300001346\|JGI20151J14362_10058853	Not Available	1592	Open in IMG/M
3300001347\|JGI20156J14371_10068016	Not Available	1338	Open in IMG/M
3300001349\|JGI20160J14292_10027273	Not Available	3038	Open in IMG/M
3300001352\|JGI20157J14317_10132097	Not Available	815	Open in IMG/M
3300001352\|JGI20157J14317_10132420	Not Available	813	Open in IMG/M
3300001352\|JGI20157J14317_10158619	Not Available	694	Open in IMG/M
3300001352\|JGI20157J14317_10162881	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	678	Open in IMG/M
3300001352\|JGI20157J14317_10168471	Not Available	659	Open in IMG/M
3300001353\|JGI20159J14440_10012871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	4339	Open in IMG/M
3300001846\|ACM22_1073825	Not Available	549	Open in IMG/M
3300001960\|GOS2230_1006171	Not Available	1885	Open in IMG/M
3300003474\|NAP4_1000815	All Organisms → cellular organisms → Bacteria	4577	Open in IMG/M
3300004097\|Ga0055584_100736229	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1031	Open in IMG/M
3300004097\|Ga0055584_101349030	Not Available	742	Open in IMG/M
3300004279\|Ga0066605_10335108	Not Available	551	Open in IMG/M
3300007655\|Ga0102825_1023825	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300009076\|Ga0115550_1013636	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4178	Open in IMG/M
3300009437\|Ga0115556_1317903	Not Available	548	Open in IMG/M
3300009438\|Ga0115559_1207043	Not Available	706	Open in IMG/M
3300009496\|Ga0115570_10384079	Not Available	598	Open in IMG/M
3300009505\|Ga0115564_10382870	Not Available	690	Open in IMG/M
3300017818\|Ga0181565_10167097	Not Available	1527	Open in IMG/M
3300017818\|Ga0181565_10544933	Not Available	749	Open in IMG/M
3300017824\|Ga0181552_10024391	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	3759	Open in IMG/M
3300017949\|Ga0181584_10338224	Not Available	954	Open in IMG/M
3300017949\|Ga0181584_10663622	Not Available	626	Open in IMG/M
3300017950\|Ga0181607_10319431	Not Available	867	Open in IMG/M
3300017952\|Ga0181583_10836727	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	539	Open in IMG/M
3300017956\|Ga0181580_10248331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1229	Open in IMG/M
3300017957\|Ga0181571_10592887	Not Available	670	Open in IMG/M
3300017957\|Ga0181571_10735091	Not Available	588	Open in IMG/M
3300017958\|Ga0181582_10157674	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1578	Open in IMG/M
3300017958\|Ga0181582_10415976	Not Available	853	Open in IMG/M
3300017964\|Ga0181589_10105994	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300017964\|Ga0181589_10396767	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300017967\|Ga0181590_10357559	Not Available	1047	Open in IMG/M
3300017968\|Ga0181587_10232527	Not Available	1264	Open in IMG/M
3300017968\|Ga0181587_10287427	Not Available	1112	Open in IMG/M
3300017968\|Ga0181587_10590588	Not Available	711	Open in IMG/M
3300017969\|Ga0181585_10481913	Not Available	835	Open in IMG/M
3300017969\|Ga0181585_11099095	Not Available	503	Open in IMG/M
3300017985\|Ga0181576_10437232	Not Available	812	Open in IMG/M
3300017985\|Ga0181576_10673839	Not Available	620	Open in IMG/M
3300017985\|Ga0181576_10678815	Not Available	617	Open in IMG/M
3300017986\|Ga0181569_10373097	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	979	Open in IMG/M
3300017986\|Ga0181569_10631989	Not Available	713	Open in IMG/M
3300017986\|Ga0181569_10762752	Not Available	636	Open in IMG/M
3300017986\|Ga0181569_11052706	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	523	Open in IMG/M
3300018039\|Ga0181579_10317133	Not Available	866	Open in IMG/M
3300018039\|Ga0181579_10394400	Not Available	749	Open in IMG/M
3300018048\|Ga0181606_10712373	Not Available	507	Open in IMG/M
3300018049\|Ga0181572_10596707	Not Available	672	Open in IMG/M
3300018049\|Ga0181572_10750515	Not Available	584	Open in IMG/M
3300018410\|Ga0181561_10232985	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	884	Open in IMG/M
3300018413\|Ga0181560_10121920	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1354	Open in IMG/M
3300018415\|Ga0181559_10185572	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1202	Open in IMG/M
3300018418\|Ga0181567_10411722	Not Available	894	Open in IMG/M
3300018418\|Ga0181567_10729593	Not Available	631	Open in IMG/M
3300018421\|Ga0181592_10786669	Not Available	628	Open in IMG/M
3300018423\|Ga0181593_10384038	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300018423\|Ga0181593_10466635	Not Available	930	Open in IMG/M
3300018423\|Ga0181593_10750509	Not Available	687	Open in IMG/M
3300018424\|Ga0181591_10628763	All Organisms → cellular organisms → Bacteria → PVC group	764	Open in IMG/M
3300018426\|Ga0181566_10217496	Not Available	1407	Open in IMG/M
3300018426\|Ga0181566_10347743	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1063	Open in IMG/M
3300018426\|Ga0181566_11003983	Not Available	562	Open in IMG/M
3300018426\|Ga0181566_11189373	Not Available	508	Open in IMG/M
3300019283\|Ga0182058_1309644	Not Available	501	Open in IMG/M
3300020056\|Ga0181574_10204262	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300020166\|Ga0206128_1041931	Not Available	2303	Open in IMG/M
3300020174\|Ga0181603_10334364	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	573	Open in IMG/M
3300020182\|Ga0206129_10067586	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300020182\|Ga0206129_10364288	Not Available	556	Open in IMG/M
3300020185\|Ga0206131_10029401	Not Available	4199	Open in IMG/M
3300020187\|Ga0206130_10126314	Not Available	1410	Open in IMG/M
3300020189\|Ga0181578_10239748	All Organisms → cellular organisms → Eukaryota → Amoebozoa	874	Open in IMG/M
3300020207\|Ga0181570_10178433	Not Available	1141	Open in IMG/M
3300020384\|Ga0211596_10121948	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	809	Open in IMG/M
3300020414\|Ga0211523_10159208	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	943	Open in IMG/M
3300020442\|Ga0211559_10000409	All Organisms → cellular organisms → Bacteria	27255	Open in IMG/M
3300021365\|Ga0206123_10138009	Not Available	1126	Open in IMG/M
3300021371\|Ga0213863_10193678	Not Available	899	Open in IMG/M
3300021371\|Ga0213863_10286955	Not Available	693	Open in IMG/M
3300021389\|Ga0213868_10250006	Not Available	1037	Open in IMG/M
3300021957\|Ga0222717_10218974	Not Available	1121	Open in IMG/M
3300021960\|Ga0222715_10448630	Not Available	695	Open in IMG/M
3300022914\|Ga0255767_1136974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	1080	Open in IMG/M
3300022934\|Ga0255781_10274266	Not Available	779	Open in IMG/M
3300023081\|Ga0255764_10409304	Not Available	585	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10119365	Not Available	1443	Open in IMG/M
3300023117\|Ga0255757_10453879	Not Available	572	Open in IMG/M
3300023119\|Ga0255762_10288210	Not Available	860	Open in IMG/M
3300023170\|Ga0255761_10460173	Not Available	613	Open in IMG/M
3300023172\|Ga0255766_10566335	Not Available	509	Open in IMG/M
3300023173\|Ga0255776_10161233	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300023178\|Ga0255759_10190383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1363	Open in IMG/M
3300023178\|Ga0255759_10367929	Not Available	882	Open in IMG/M
3300024346\|Ga0244775_10729090	Not Available	797	Open in IMG/M
3300025637\|Ga0209197_1173973	Not Available	561	Open in IMG/M
3300025705\|Ga0209374_1186847	Not Available	557	Open in IMG/M
3300025832\|Ga0209307_1021993	Not Available	2713	Open in IMG/M
3300025869\|Ga0209308_10084926	Not Available	1568	Open in IMG/M
3300025876\|Ga0209223_10250285	Not Available	833	Open in IMG/M
3300025880\|Ga0209534_10037073	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	3273	Open in IMG/M
3300025880\|Ga0209534_10140138	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1297	Open in IMG/M
3300027189\|Ga0208675_1015553	Not Available	939	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	60.19%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	14.81%
Pelagic	Environmental → Aquatic → Marine → Pelagic	12.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.41%
Coastal	Environmental → Aquatic → Marine → Coastal	2.78%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.93%
Inlet	Environmental → Aquatic → Marine → Inlet	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	57.41%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	12.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.85%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	57.41%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	12.96%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	7.41%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	5.56%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.63%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.85%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.85%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.93%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001846	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25b	Environmental	Open in IMG/M
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022914	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300027189	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100498283	3300000117	Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQFLQEKLDEISGASD*
JGI20151J14362_100588532	3300001346	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
JGI20156J14371_100680163	3300001347	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASDQIL*
JGI20160J14292_100272732	3300001349	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAILTPVQAYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
JGI20157J14317_101320972	3300001352	Pelagic Marine	MNNYTTSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAXIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
JGI20157J14317_101324202	3300001352	Pelagic Marine	VTEDVFMKNFTSRSEKNLLESPEKFTSKKLVFFIYSPCYIALFFAIFSVIFDSRTSPNAIVLTSMLCLVCGSIDFLRKKIIQQDKTIQLLQEKLDKVSGASD*
JGI20157J14317_101586192	3300001352	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPPFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD
JGI20157J14317_101628812	3300001352	Pelagic Marine	MKNFSSRSEKELLESPEKFSSKKLVFLIYAPCFIALFLAISLVVIDSSRSYNAIGLASVLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD*
JGI20157J14317_101684711	3300001352	Pelagic Marine	RSEKELWESPEKFTSKKLVFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD*
JGI20159J14440_100128713	3300001353	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCXSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
ACM22_10738252	3300001846	Marine Plankton	LESPEKFTSKKLVFFIYVPCFIALFFAIFCAIIDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQLLQEKLAQVSGSSD*
GOS2230_10061714	3300001960	Marine	VPIFAGDQNYIFFLNIDVVRKQLLVRLDVCMKNFTSKSEKELLESPEKFASKKLVFFIYTPCFIALVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSEASD*
NAP4_10008155	3300003474	Estuarine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
Ga0055584_1007362292	3300004097	Pelagic Marine	VREDVFMKNFTSRSEKNLLESPEKFTSKKLVFFIYSPCYIALFFAIFSVIFDSRTSPNAIVLTSMLCLVCGSIDFLRKKIIQQDKTIQLLQEKLDKVSGASD*
Ga0055584_1013490301	3300004097	Pelagic Marine	MKNFTSRSEKELWESPEKFTSKKLVFIIYTPCYIALGYAIFCAIIDSSTAPYAIVLSSVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDKVSGASD*
Ga0066605_103351081	3300004279	Marine	KLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
Ga0102825_10238252	3300007655	Estuarine	MRKDVCMNNYTSRSEKKLLESPETFTSKKLVFFIYSPCFLALVFGIFSVSVNSGTSPYPIVLASLLSLVCCSIDFLRKKIIQQDKTMQLLQEKLDKLSGASG*
Ga0115550_10136362	3300009076	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGESD*
Ga0115556_13179031	3300009437	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQ
Ga0115559_12070432	3300009438	Pelagic Marine	YTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
Ga0115570_103840792	3300009496	Pelagic Marine	MKNFTSSAEKELLESPEKFASKKQGFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQE
Ga0115564_103828701	3300009505	Pelagic Marine	TSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD*
Ga0181565_101670972	3300017818	Salt Marsh	MKNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKKIQLLQEKLDQVSGESD
Ga0181565_105449331	3300017818	Salt Marsh	MNTRTYLSEKELLESPEKFASKKLVYLIYAPCFIALFFAISLVVIDSSGSHNSIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDQVSGSSD
Ga0181552_100243912	3300017824	Salt Marsh	MKNFTSRSEKEFFENPKIFASKKLIFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0181584_103382241	3300017949	Salt Marsh	MKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181584_106636221	3300017949	Salt Marsh	MNTNTYLSEKELWESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVYSSIDFLRKKIIQQDKTIQLLQEKLDQVSGVSD
Ga0181607_103194312	3300017950	Salt Marsh	MHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181583_108367271	3300017952	Salt Marsh	MHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLD
Ga0181580_102483313	3300017956	Salt Marsh	SEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181571_105928871	3300017957	Salt Marsh	VDEVPILANDQNYILLLNIDVARKQLLVRLHVSMKNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQLLQEKLDQVSGSSD
Ga0181571_107350911	3300017957	Salt Marsh	MNTHTYLSEKELLESPEKFASKKLVYLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDQVSGSSD
Ga0181582_101576741	3300017958	Salt Marsh	MNNHTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVYSSIDFLRKKIIQQEKTIQLLQEKLDQVSGVSD
Ga0181582_104159761	3300017958	Salt Marsh	VDGVPTSTNDQNYILLLNIVIVREQLLVRLGVCMKNFTSRSEKELLESPKKIASKKLVFFIYAPCFIALCYAILCAIIDSSTAPNAIVLASTLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDKVSGSPN
Ga0181589_101059942	3300017964	Salt Marsh	VRRYYNMHNYTSNFESELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0181589_103967672	3300017964	Salt Marsh	VSILANDQNYILLLNIVIVREQLLVRLGVCMKNFTSSSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181590_103575591	3300017967	Salt Marsh	MKNFTSRSEKEFFENPKIFASKKLIFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181587_102325272	3300017968	Salt Marsh	VPIFAGDQNYIFFLNIDVVRKQLRVRLDVCMKNFTSKSEKELLESPEKFASKKLVFFIYSPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0181587_102874272	3300017968	Salt Marsh	VRLDVCMKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181587_105905882	3300017968	Salt Marsh	WPADGVPTLAGDQNYILWLNIVIVVKQVLVRLNVCMKNFTSRSEKEFFENPKIFASKKLIFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181585_104819131	3300017969	Salt Marsh	MKNFTSRSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0181585_110990952	3300017969	Salt Marsh	MNNHTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVYSSIDFLRKKIIQQ
Ga0181576_104372321	3300017985	Salt Marsh	KNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFITDSSTTPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQLLQEKLDQVSGSSD
Ga0181576_106738392	3300017985	Salt Marsh	LLFVRRYYNMHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181576_106788152	3300017985	Salt Marsh	MKNFTSRSEKEFFENPKIFASKKLIFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIKLLQEK
Ga0181569_103730972	3300017986	Salt Marsh	VRGYYNMHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181569_106319891	3300017986	Salt Marsh	MNTHTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDQVSGVSD
Ga0181569_107627521	3300017986	Salt Marsh	VDGVPTSTNDQNYILLLNIVIVREQLLVRLGVCMKNFTSRSEKELLESPKKIASKKLVFFIYAPCFIALCYAILCAIIDSSTAPNAIVLASMLTLVCNSIDFLRKKII
Ga0181569_110527062	3300017986	Salt Marsh	MKNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQSLQEKLDQVSGSSD
Ga0181600_103036631	3300018036	Salt Marsh	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQ
Ga0181579_103171331	3300018039	Salt Marsh	MNTNTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181579_103944002	3300018039	Salt Marsh	LIFKKIIVDELLLVRLNVCMKNFTSKSEKELLESPEKFASKKLVFFIYTPCLIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181606_107123731	3300018048	Salt Marsh	MNNHTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVYSSIDFLRKKIIQQDKTIQLLQEKLDQVSGVSD
Ga0181572_105967072	3300018049	Salt Marsh	MKNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFITDSSTTPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQLLHEKLDEVSGSSD
Ga0181572_107505151	3300018049	Salt Marsh	MNTRTYLSEKELLESPEKFASKKLVYLIYAPCFIALFFAISLVVIDSSISYNAIALASMSTLVCSSIDFLRKKIIQQDKTIQSLQEKLDQVSGSSD
Ga0181561_102329852	3300018410	Salt Marsh	MHNYTSNFESELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181560_101219203	3300018413	Salt Marsh	VRRYYNMHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181559_101855722	3300018415	Salt Marsh	VRRYYNMHNYTSNFESELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181567_104117221	3300018418	Salt Marsh	VDGVPTSTNDQNYILLLNIVIVREQLLVRLGVCMKNFTSRSEKELLESPKKIASKKLVFFIYAPCFIALCYAILCAIIDSSTAPNAIVLASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDRVSGVSD
Ga0181567_107295932	3300018418	Salt Marsh	MXLDVSMKNFTSSAEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKKIQLLQEKLDQVSGESD
Ga0181592_107866692	3300018421	Salt Marsh	VDGVPTSTNDQNYILLLNIVIVREQLLVRLGVCMKNFTSSSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSG
Ga0181593_103840383	3300018423	Salt Marsh	EKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181593_104666352	3300018423	Salt Marsh	YILLLNIVIVREQLLVRLGVCMKNFTSSSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0181593_107505092	3300018423	Salt Marsh	MNTNTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVYSSIDFLRKKIIQQEKTIQLLQEKLDQVSGVSD
Ga0181591_106287632	3300018424	Salt Marsh	MNTNTYLSEKELWESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181566_102174962	3300018426	Salt Marsh	MNNHTYLSEKELLESPEKFASKKLVFLIYAPCFIALFLAISFAIIDSSGSHNAIALASMLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181566_103477432	3300018426	Salt Marsh	VDGVPTSTNDQNYILLLNIVIVREQLLVRLGVCMKNFTSRSEKELLESPKKIASKKLVFFIYAPCFIALCYAILCAIIDSSTAPNAIVLASTLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSG
Ga0181566_110039831	3300018426	Salt Marsh	IRKSXNEXKPSWINSXPADGVPIFANDQNYILLLNIDVARKQLLVRLDVCMKNFTSRSEKELLESPEKFASKKLVYLIYAPCFIALFFAISLVVIDSSISYNAIALASMSTLVXSSIDFLRKKIIQQDKTIQLLHERLDEVSGSSE
Ga0181566_111893731	3300018426	Salt Marsh	MIRITFLLNIVIVREQLLVRLDVCMKNFTSKSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0182058_13096441	3300019283	Salt Marsh	SEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKTIQLLQEKLDQVSGSSD
Ga0181574_102042623	3300020056	Salt Marsh	LDVCMKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0206128_10419312	3300020166	Seawater	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0181603_103343642	3300020174	Salt Marsh	MHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0206129_100675861	3300020182	Seawater	NYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0206129_103642882	3300020182	Seawater	ILWLNIVIVVKQVLVRLNVCMKNFTSRSEKELWESPEKFTSKKLVFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0206131_100294012	3300020185	Seawater	MNNYTSSPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0206130_101263142	3300020187	Seawater	MKNFTSRSEKELWESPEKFTSKKLVFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0181578_102397482	3300020189	Salt Marsh	GVPTLAGDQNYILWLNIVIVDELLLVRLDVCMKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0181570_101784331	3300020207	Salt Marsh	MKNFTSRSEKELLESPEKFASKKMIFFIYSPCFIALFYCFLNFISDSSTAPNAIVLASMLSLVCGSIDFLRKKIIQQDKKIQLLQEKLDQVSGESD
Ga0211596_101219481	3300020384	Marine	LIFKKIIVDELLLVRLDDCMKNFTSRSEKELWESPEKFASKKLVYLIYAPCFIALGLAIFSIDSRTGSNAVVLASMLSLVCSSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0211523_101592081	3300020414	Marine	VDEVQILANDQNYILLLNIVIVRKQLLVRLDVCMKNFTSKSEKELLESSEKFASKKLVFFIYTPCFIALGFAILCAIIDSSTAPYAIVLASMLPLVCNSIDFLRKKIIQQDKTIQ
Ga0211559_1000040914	3300020442	Marine	MKNFTSRSEKELLESPEKFASKKLVFFIYTPCFIVLFLAISFVIIDSSKSYNAIALASVLTLVCSSIDFLRKKIIQQDKTIQSLQEKLDRVSGSSD
Ga0206123_101380093	3300021365	Seawater	MNNYTTSSSKKLLESPEKLTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0213863_101936782	3300021371	Seawater	MHNYTSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLVSSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0213863_102869551	3300021371	Seawater	MIGRMNSHTNRSEKEFLESPEKFSSKKLVFLIYAPCFIALFLAISLVVIDSSKSYNAIGLASVLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0213868_102500062	3300021389	Seawater	MNTHTYLSEKELLESPEKFASKKLVYLIYAPCFIALFFAISLVVIDSSISYNAIALASMSTLVCSSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0222717_102189741	3300021957	Estuarine Water	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQL
Ga0222715_104486302	3300021960	Estuarine Water	VRLDVSMKNFSSRSEKELLESPEKISSKKLVFLIYAPCFIALFLAISLVVIDSSRSYNAIGLASVLTLVCSSIDFLRKKIIQQDKTIQLLQQKLDQVSRSSD
Ga0255767_11369742	3300022914	Salt Marsh	GVPTLAGDQNYILWLNIVIVNELLLVRLDVCMKNFTSRSEKEFFENPEKFASKKQVFFIYSPCLISLGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0255781_102742661	3300022934	Salt Marsh	MKNFTSRSEKELLESPEKFASKKLVFFIYSPCFIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVS
Ga0255764_104093041	3300023081	Salt Marsh	TSNFERELLKSPEKLTSLKLVFFIYSPCFIALFFGIFSVIIDSGGSPYIVVLASSLSLVCCSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
(restricted) Ga0233432_101193652	3300023109	Seawater	MKIPTYRSEKEFLESPEKFSSKKLVFLIYAPCFIALFLAISLVVIDSSRSYNAIGLASVLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0255757_104538792	3300023117	Salt Marsh	DQNYILLLNIVIVREQLLVRLGVCMKNFTSSSEKELLESPEKFASKKLVFFIYSPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0255762_102882101	3300023119	Salt Marsh	MKNFTSRSEKELWESPEKFASKKLVFFIYTPCFIALGFAILCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQ
Ga0255761_104601731	3300023170	Salt Marsh	IVIVDELLFVRLDVCMKNFTSRSEKEFFENPEKFASKKQVFFIYSPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0255766_105663352	3300023172	Salt Marsh	MKNFTSSSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGSSD
Ga0255776_101612331	3300023173	Salt Marsh	RLGVCMKNFTSSSEKELLESPEKFASKKLVFFIYTPCFIAIVFAILLAIIDSSTAPYAILLASMLPLVCNSIDFLRKKIIQQDKTIQSLQEKLDQVSGASD
Ga0255759_101903831	3300023178	Salt Marsh	QLLMRLDVCMKNFTSRSEKELLESPEKFASKKLVFFIYTPCLIALGFAIFSVIIDSRTGSNAIVLASMLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDQVSGASD
Ga0255759_103679292	3300023178	Salt Marsh	ESPEKFTSKKLVFFIYTPCFIALGYAIFCAIIDSSTAPYAIVLASVLTLVCNSIDFLRKKIIQQDKTIQLLQEKLDEVSGSSD
Ga0244775_107290901	3300024346	Estuarine	MRKDVCMNNYTSRSEKKLLESPETFTSKKLVFFIYSPCFLALVFGIFSVSVNSGTSPYPIVLASLLSLVCCSIDFLRKKIIQQDKTMQLLQEKLDKLSGASG
Ga0209197_11739731	3300025637	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGAADQ
Ga0209374_11868471	3300025705	Marine	ENKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0209307_10219932	3300025832	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCCSIDILRKKIIQQDKTIQLLQEKLDEISGASD
Ga0209308_100849262	3300025869	Pelagic Marine	MNNYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASDQIL
Ga0209223_102502851	3300025876	Pelagic Marine	NYTSSSEKKLLESPEKFTSIKLVFLIYSPCFIALVFAMLCAIIDSRTSSYAIVITSLLSLVCGSIDILRKKIIQQDKTIQLLQEKLDEISGASDQIL
Ga0209534_100370732	3300025880	Pelagic Marine	MKNFSSRSEKELLESPEKFSSKKLVFLIYAPCFIALFLAISLVVIDSSRSYNAIGLASVLTLVCSSIDFLRKKIIQQDKTIQLLQEKLDKVSGSSD
Ga0209534_101401383	3300025880	Pelagic Marine	MKNFTSRSEKNLLESPEKFTSKKLVFFIYSPCYIALFFAIFSVIFDSRTSPNAIVLTSMLCLVCGSIDFLRKKIIQQDKTIQLLQEKLDKVSGASD
Ga0208675_10155532	3300027189	Estuarine	SPETFTSKKLVFFIYSPCFLALVFGIFSVSVNSGTSPYPIVLASLLSLVCCSIDFLRKKIIQQDKTMQLLQEKLDKLSGASG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters