Metagenome / Metatranscriptome Family F089859

Overview

Basic Information

• Family ID: F089859
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 108
• Average Sequence Length: 45 residues
• Representative Sequence: VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWL
• Number of Associated Samples: 11
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.93 %
• % of genes from short scaffolds (< 2000 bps): 0.93 %
• Associated GOLD sequencing projects: 11
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (98.148 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus (98.148 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 57.75%
  β-sheet: 0.00%
  Coil/Unstructured: 42.25%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00078	RVT_1	0.93
PF05577	Peptidase_S28	0.93
PF16470	S8_pro-domain	0.93
PF07714	PK_Tyr_Ser-Thr	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.70

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300010035|Ga0126343_10342700	Not Available	1029

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	100.00%

Category

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	100.00%

Type

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	98.15%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified	1.85%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	98.15%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified	1.85%

Habitat

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	98.15%
Cnidaria	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria	1.85%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300003317	Belize BBD 4	Host-Associated
3300008014	Coral microbial communities from Puerto Morelos, Mexico - Diporia T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008036	Coral microbial communities from Puerto Morelos, Mexico - Diploria C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008038	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008039	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008043	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008044	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300008046	Coral microbial communities from Puerto Morelos, Mexico - Diporia T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated
3300010034	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 1 metagenome	Host-Associated
3300010035	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 2 metagenome	Host-Associated
3300010394	Coral microbial communities from Florida Keys, Florida, USA - Orbicella T D metagenome	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BLZ4_10383262	3300003317	Cnidaria	VFLAGYSVAMVIHCVTKMITTSSAMIGQFVDTMILASSDKERL*
BLZ4_10615033	3300003317	Cnidaria	MLLEGNIVAMVTYFAPKLTATCLSMIGQVFDNDLASTDIEWL
Ga0099814_10984891	3300008014	Coral	LAGHIVAMVTYCAKKLTTTYSAMIGQIFDTMRLASTNIEQL*
Ga0099811_13883141	3300008036	Coral	LAGHIVAMVTYCAKKLTTTYSAMIGQIFDTMRLASIYTEWL*
Ga0099811_14448063	3300008036	Coral	FLTHHIVAMVTYCATELATTCSATSGQIIDTMSLASTDIN*
Ga0099805_10494811	3300008038	Coral	GHIAAMVTFCATILTASCSPMIGQFFDKMILASTNIEWL*
Ga0099802_13434352	3300008039	Coral	VFLAGHGVAMVINCATKLTATFLPMIGQFVDTMIFASTEKEWL*
Ga0099807_14586902	3300008043	Coral	LKLKLRVFLAGRIAAMVTYCATKLTATCLPLIEQFFDTMILASTEIEWL*
Ga0099804_10440634	3300008044	Coral	AGHIVAMVTYCATKLTAICSPMIKQFFDTMTLASTDIEWL*
Ga0099813_12907351	3300008046	Coral	HIVAMVTYCATELATTCSATSGQIIDTMSLASTDID*
Ga0126342_101685781	3300010034	Coral	VFLAGRIVAMVTYCATILTATCSPMIGQFVDTMILASTGIEWL*
Ga0126342_101782152	3300010034	Coral	VFLAGRIVAMVTYCATILTATCSPMIGQFVDTMILASTGIDWL*
Ga0126342_102562151	3300010034	Coral	VFLAGGIVAMVTYCATILTATSSPMIGQFADTMILASTG
Ga0126342_102637432	3300010034	Coral	VFLAGRIVAMVTYFATILTATCSPMIGQFVDAMILASTGIEWL*
Ga0126343_100042863	3300010035	Coral	VFLAGHIVAMVTYCAKKLTATYSPMIGQFIDTMILASTDKECL*
Ga0126343_100123008	3300010035	Coral	KLKSRAFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILVTTSIEWL*
Ga0126343_100133448	3300010035	Coral	VFLAGHIVAMVTYCATKLTAPYSPMIGQFVDTMILASTDKEW*
Ga0126343_100189221	3300010035	Coral	VFLAGHIVAMVAYCATKLTATYSPMIGQFVDTMVLASTGIEWL*
Ga0126343_100220841	3300010035	Coral	KLKLRVFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLESTSIEWL*
Ga0126343_100221991	3300010035	Coral	VFLAGHFVAMVTYCATKLTATYSPMIGQFVDTMILASTGLEWL*
Ga0126343_100265994	3300010035	Coral	LKLRVFLAGHIVAMVTYCATELTATYSPMIGQFVDTMILASTGIEWL*
Ga0126343_100280172	3300010035	Coral	KLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASIDKEWL*
Ga0126343_100299475	3300010035	Coral	LQFDNKKWASPSSFLSYKRSKLKLRVFLAGHIVAMVTYWVMRIIPTCSPVIGQFSDTMIVASTDKEW*
Ga0126343_100315776	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSAMIGQFVDTEILASTDKEWL*
Ga0126343_100360911	3300010035	Coral	VFSAGHIVAMVTYCATKLRATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_100384546	3300010035	Coral	LRVFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTRIEWL*
Ga0126343_100414926	3300010035	Coral	VFLAGHIAAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_100463755	3300010035	Coral	LSYKCSKLKLRVFLAGHIVAMVTYCATTLTATYSPMIVQFVDTMMLVSTSIEWL*
Ga0126343_100614381	3300010035	Coral	KWGSPSSFLSYKRSKLKLRVFLAGHIVAMVTYWATKLTATRSLMIVQFVDTMILVSISIEWL*
Ga0126343_100661981	3300010035	Coral	LRVFLAGHIVAMVTYCATKLTATYLPMIGQFVDTMILASTDKEWL*
Ga0126343_100696034	3300010035	Coral	LAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWLKSTIKL*
Ga0126343_100705371	3300010035	Coral	RSKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFVDTMILVSTSKEWL*
Ga0126343_100712243	3300010035	Coral	LSYKRSKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFVDTMMLMSTSIEWL*
Ga0126343_100817653	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYLPMIGQFADTMILASTDKEWL*
Ga0126343_100869351	3300010035	Coral	LSYKLSKLKLRVFLAGHIVAMVTYCATKLTATYCPMIVQFVDTMMLVSTSIEWL
Ga0126343_100882492	3300010035	Coral	RVFLAGHIVAMVTYCAIKLTATYSPMIVQFVDTMMLVATV*
Ga0126343_101034852	3300010035	Coral	MFLAGHIVAMVTFCATKLTATYFPVIVQFVDTMMLVSTSIEWLQ*
Ga0126343_101205851	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPTVGQFVDTMILASTDKEWL*
Ga0126343_101275771	3300010035	Coral	VFLAGHIVAMVTYCAKKLTATYSPMIVQFVDTMMLVSTGKE*
Ga0126343_101409972	3300010035	Coral	MVFLAGDIVAMVTYCAKKLTATYSPTIVQFVDTMMLVSTSKEWL*
Ga0126343_101463861	3300010035	Coral	RVFLAGHIVAMVTYWATKLTATYSPMIVQFVDTMLVSTSIEWL*
Ga0126343_101570601	3300010035	Coral	MVTYCATKLTATYPPMIGQFVDTMILASTDKEWL*
Ga0126343_101589914	3300010035	Coral	VFLARHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_101775421	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYLTMIGQFVDTMILASIDKEWL*
Ga0126343_101817921	3300010035	Coral	RSKLKLRVFLAGYIVAMVTYSATKLTATYSPMIVQFVDTMILVSTSIEWL*
Ga0126343_101968552	3300010035	Coral	VFLAGHIVATVTYCATKLTATYSPMIGQFVDTMILASTGIEWL*
Ga0126343_102043691	3300010035	Coral	VFLAGHIVAVVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_102312122	3300010035	Coral	FLAGHIVAMVTYCATKLTATYSPVIVQFVDTMMLVSTSIEWL*
Ga0126343_102313831	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYFPMIVQFSDIIIVASIDKEQ*
Ga0126343_102330752	3300010035	Coral	LRVFLAGHIVAMVTYCATKLTATYLPMIGQFVDTMILASTDQECL*
Ga0126343_102364121	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVPTSIES*
Ga0126343_102385481	3300010035	Coral	VAMVTYCATKLTATYSPMIWQFVDTMMLASTGIEWL*
Ga0126343_102603151	3300010035	Coral	RVFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWL*
Ga0126343_102674251	3300010035	Coral	VFLAGHIVAMVPYCATKLTASYSPMIGQFVDTMILASTG
Ga0126343_102703462	3300010035	Coral	MFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_102781981	3300010035	Coral	QFDNKKWGSPSSFLSYERSKLKLRVFLAGHIVAMVTYWAPKLTATHSPMTAQFVDTMMLVSISIEWL*
Ga0126343_102910721	3300010035	Coral	VFLAGHIVAMVTFCATKLTATYSPMIGQFVDIMILVSTDKEWL
Ga0126343_102944642	3300010035	Coral	VFLAGDIVAMVTYCAKKLTATYSPIIVQFVDTMMLVSTGKEWL*
Ga0126343_103070651	3300010035	Coral	RVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKKEWL*
Ga0126343_103104071	3300010035	Coral	VFLAGHIVAMVAYCATKLTATYSPMIGQFVDTMILASTDKEWLK*
Ga0126343_103131641	3300010035	Coral	MVFLAGDIVAMVTYCAKKLTATYSPMIVQFVDTMMLVSTSKEWL*
Ga0126343_103311502	3300010035	Coral	LKLKLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILTSTGIEWS*
Ga0126343_103396392	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWL*
Ga0126343_103427002	3300010035	Coral	RVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTNKEWL*
Ga0126343_104103041	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSTMIGQFVDTMMLASTGIVWL*
Ga0126343_104366393	3300010035	Coral	RSKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFVDTMMMVSTSIEWL*
Ga0126343_104830872	3300010035	Coral	VLLAGDIVAMVAYCAKKLTATYLPMIVQFVDTMMLVSTSKEGL*
Ga0126343_104907311	3300010035	Coral	RSKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFVDTMTLVSTSIEWL*
Ga0126343_105121981	3300010035	Coral	LKLKLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTVILTSTDK*
Ga0126343_105156381	3300010035	Coral	VFLAGHIVAMVTYCAAKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_105157941	3300010035	Coral	GVFLACHIVAMVTFCATKLTATYSPMIGQFVDTMILASTDREWL*
Ga0126343_105223891	3300010035	Coral	KKWGSPSSFLSYKRSKLKLRVFLAGHIVAMVTYWATKLTAIYSPMIVQFVDTMMLVSSSIEWL*
Ga0126343_105272053	3300010035	Coral	SYKRSKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFVGIMMLVSTSKEWL*
Ga0126343_105374752	3300010035	Coral	LKLGVFLACHIVAMVTYCATKLTATYSPMIGQFVDTMILASPDKEWL*
Ga0126343_105508541	3300010035	Coral	LRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_105574782	3300010035	Coral	HIVAMVTYCATKLTATYSPMIVQFVDTMMLVSKSIEWL*
Ga0126343_105697521	3300010035	Coral	HIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWL*
Ga0126343_105727421	3300010035	Coral	KLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTNKEWL*
Ga0126343_105824691	3300010035	Coral	NLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTGIEWL*
Ga0126343_106093251	3300010035	Coral	VFLACHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_106105852	3300010035	Coral	IVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_106151832	3300010035	Coral	HIVAMVTYCATKLTATYSPIIGQFVDTMILASTDKEWL*
Ga0126343_106158301	3300010035	Coral	PSSFLSYKLLKLNLRVFLAGHIVAMVTYCATKLTATYSPMMGQFVDTMILTSTDREWL*
Ga0126343_106328481	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYLPMIGQFVDTMILASTD
Ga0126343_106361452	3300010035	Coral	VFLAGHIVAMATYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_107090821	3300010035	Coral	GHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWL*
Ga0126343_107210441	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLV
Ga0126343_107222852	3300010035	Coral	DNKKWGSPSSFLSYKRSKLKLRVFLAGHIVAMVTYWAIKLTATYSPMIVQFVDTMMLVSTSIEWS*
Ga0126343_107439401	3300010035	Coral	LLKLKLRVFLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_107451551	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYCPMIVQFVDTMMLVSTSIEWL
Ga0126343_107493672	3300010035	Coral	VSLAGHIVAMVTICAAKLTATYSPMVGQFVDTMILASTGIEWL*
Ga0126343_107634661	3300010035	Coral	LAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWLL*
Ga0126343_107645152	3300010035	Coral	FLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSLEWL*
Ga0126343_107664171	3300010035	Coral	LRVFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTRLSIEWL*
Ga0126343_107672081	3300010035	Coral	SKLKLRVFLAGHIVAMVTYWATKLTATYSPMIVQFFDTMMLVSTSIEWL*
Ga0126343_107748521	3300010035	Coral	VFLAGRIVSLVTYCATKLTATYSPMIGQFVDTMILAST
Ga0126343_107769421	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLMSTSIEWL*
Ga0126343_107793461	3300010035	Coral	KLRVFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLVSTSIEWLLL*
Ga0126343_107971042	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIGQFVGTMILAS
Ga0126343_108008251	3300010035	Coral	VFLAGHIVAMVTYSATKLTAAYSPMIVQFVDTMMLVSASIEWLKSTIKL*
Ga0126343_108108251	3300010035	Coral	AMVTYCATKLTATYSPMIGQFVDTMILASTDKEWL*
Ga0126343_108114012	3300010035	Coral	GSPSSFLSYKRSKLKLRVFLAGHIVAMVTYWATKLTATHSPMIVQFVDTMMLVSTSIEWL
Ga0126343_108160842	3300010035	Coral	AGHIVAMVTYCATKLTATYCPMIVQFVDTMMLVSTSIEWL*
Ga0126343_108518791	3300010035	Coral	VSLAGHIVAMVTYCATKLTATYSPMIGQFVDTMILASTGIEW
Ga0126343_108638641	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIVQFVDTMMLMSTSI
Ga0126343_109334281	3300010035	Coral	VFLVGRIVAMVTYCATKLTATYSPMIGQFVDTLILESTEKEWL*
Ga0126343_109999931	3300010035	Coral	VFLAGHIVAMVTYCATKLTATYSPMIRQFVDTMILASTDKEWL
Ga0126341_11348691	3300010394	Coral	GHTVSFVTYCATKLTSTCSPMIGQFFDTTIVVSTDVEWL*