Metagenome Family F089787

Overview

Basic Information

• Family ID: F089787
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 40 residues
• Representative Sequence: MLKITRAANGEVVIKLSGRMRAENLGELETLISAEASG
• Number of Associated Samples: 83
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 94.44 %
• % of genes from short scaffolds (< 2000 bps): 88.89 %
• Associated GOLD sequencing projects: 78
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (79.630 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.704 % of family members)
• Environment Ontology (ENVO): Unclassified (30.556 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 22.73%
  β-sheet: 15.15%
  Coil/Unstructured: 62.12%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02954	HTH_8	57.41
PF00158	Sigma54_activat	7.41
PF08447	PAS_3	6.48
PF00486	Trans_reg_C	2.78
PF12146	Hydrolase_4	2.78
PF00436	SSB	0.93
PF08448	PAS_4	0.93
PF13426	PAS_9	0.93
PF00296	Bac_luciferase	0.93
PF08281	Sigma70_r4_2	0.93
PF02321	OEP	0.93
PF13751	DDE_Tnp_1_6	0.93
PF00903	Glyoxalase	0.93
PF00561	Abhydrolase_1	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.85
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.93
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.63 %
Unclassified	root	N/A	20.37 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.63 %
Unclassified	root	N/A	20.37 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.63 %
Unclassified	root	N/A	20.37 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.30 %
Unclassified	root	N/A	20.37 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.85 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.93 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.93 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.93 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.93 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000955|JGI1027J12803_101523015	All Organisms → cellular organisms → Bacteria	570
3300004080|Ga0062385_10341020	All Organisms → cellular organisms → Bacteria	875
3300004091|Ga0062387_100266198	All Organisms → cellular organisms → Bacteria	1082
3300004092|Ga0062389_102691730	All Organisms → cellular organisms → Bacteria → Acidobacteria	663
3300009038|Ga0099829_11275913	All Organisms → cellular organisms → Bacteria	607
3300009088|Ga0099830_11410161	Not Available	580
3300009088|Ga0099830_11421372	All Organisms → cellular organisms → Bacteria	577
3300009089|Ga0099828_10722648	All Organisms → cellular organisms → Bacteria	894
3300009162|Ga0075423_12060646	All Organisms → cellular organisms → Bacteria	618
3300010048|Ga0126373_11970485	All Organisms → cellular organisms → Bacteria → Acidobacteria	647
3300011270|Ga0137391_10083241	All Organisms → cellular organisms → Bacteria → Acidobacteria	2761
3300011270|Ga0137391_11126686	All Organisms → cellular organisms → Bacteria → Acidobacteria	632
3300011271|Ga0137393_10080480	All Organisms → cellular organisms → Bacteria	2619
3300012205|Ga0137362_11742630	Not Available	510
3300012208|Ga0137376_10642729	All Organisms → cellular organisms → Bacteria	917
3300012361|Ga0137360_10897735	Not Available	764
3300012362|Ga0137361_10701728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924
3300012362|Ga0137361_11263566	Not Available	662
3300012363|Ga0137390_10185518	All Organisms → cellular organisms → Bacteria → Acidobacteria	2067
3300012582|Ga0137358_10491786	All Organisms → cellular organisms → Bacteria	827
3300012582|Ga0137358_10525487	Not Available	797
3300012917|Ga0137395_10992724	All Organisms → cellular organisms → Bacteria	602
3300012918|Ga0137396_10504021	Not Available	897
3300012922|Ga0137394_11057939	All Organisms → cellular organisms → Bacteria → Acidobacteria	673
3300012923|Ga0137359_10453525	All Organisms → cellular organisms → Bacteria	1134
3300012923|Ga0137359_11667162	All Organisms → cellular organisms → Bacteria	525
3300017955|Ga0187817_10842526	Not Available	586
3300020001|Ga0193731_1161679	Not Available	543
3300020580|Ga0210403_10246860	All Organisms → cellular organisms → Bacteria	1464
3300020583|Ga0210401_11045352	All Organisms → cellular organisms → Bacteria → Acidobacteria	675
3300020583|Ga0210401_11577682	All Organisms → cellular organisms → Bacteria	514
3300020583|Ga0210401_11583972	All Organisms → cellular organisms → Bacteria	512
3300021168|Ga0210406_11308986	Not Available	521
3300021170|Ga0210400_10000301	All Organisms → cellular organisms → Bacteria	58295
3300021171|Ga0210405_10734669	All Organisms → cellular organisms → Bacteria	760
3300021171|Ga0210405_11421682	All Organisms → cellular organisms → Bacteria	504
3300021178|Ga0210408_10464220	All Organisms → cellular organisms → Bacteria	1007
3300021178|Ga0210408_10941173	All Organisms → cellular organisms → Bacteria → Acidobacteria	671
3300021178|Ga0210408_11514779	All Organisms → cellular organisms → Bacteria	502
3300021180|Ga0210396_11101839	All Organisms → cellular organisms → Bacteria	668
3300021403|Ga0210397_11110956	All Organisms → cellular organisms → Bacteria	614
3300021404|Ga0210389_10443160	All Organisms → cellular organisms → Bacteria	1022
3300021405|Ga0210387_11189481	All Organisms → cellular organisms → Bacteria	662
3300021433|Ga0210391_10280773	All Organisms → cellular organisms → Bacteria	1307
3300021474|Ga0210390_11549988	Not Available	523
3300021479|Ga0210410_11559710	All Organisms → cellular organisms → Bacteria → Acidobacteria	553
3300023030|Ga0224561_1022814	Not Available	549
3300024330|Ga0137417_1109565	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456
3300024330|Ga0137417_1478360	All Organisms → cellular organisms → Bacteria	1288
3300024330|Ga0137417_1483933	Not Available	5132
3300024330|Ga0137417_1495828	Not Available	6625
3300025404|Ga0208936_1057319	Not Available	532
3300026317|Ga0209154_1318813	All Organisms → cellular organisms → Bacteria	510
3300026319|Ga0209647_1027002	All Organisms → cellular organisms → Bacteria	3432
3300026482|Ga0257172_1045647	All Organisms → cellular organisms → Bacteria	801
3300026514|Ga0257168_1028816	All Organisms → cellular organisms → Bacteria	1179
3300026514|Ga0257168_1121138	Not Available	583
3300026551|Ga0209648_10000670	All Organisms → cellular organisms → Bacteria	26570
3300026551|Ga0209648_10331304	All Organisms → cellular organisms → Bacteria	1063
3300026551|Ga0209648_10633069	All Organisms → cellular organisms → Bacteria	586
3300026555|Ga0179593_1088987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3438
3300026557|Ga0179587_10203649	All Organisms → cellular organisms → Bacteria	1254
3300027070|Ga0208365_1047336	All Organisms → cellular organisms → Bacteria	576
3300027548|Ga0209523_1026593	All Organisms → cellular organisms → Bacteria	1148
3300027645|Ga0209117_1085115	All Organisms → cellular organisms → Bacteria → Acidobacteria	881
3300027674|Ga0209118_1158405	All Organisms → cellular organisms → Bacteria	623
3300027846|Ga0209180_10052890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2245
3300027853|Ga0209274_10018199	All Organisms → cellular organisms → Bacteria	3187
3300027853|Ga0209274_10413251	All Organisms → cellular organisms → Bacteria	697
3300027862|Ga0209701_10114109	All Organisms → cellular organisms → Bacteria	1678
3300027875|Ga0209283_10227034	All Organisms → cellular organisms → Bacteria	1240
3300027875|Ga0209283_10445740	All Organisms → cellular organisms → Bacteria → Acidobacteria	839
3300027875|Ga0209283_10713247	All Organisms → cellular organisms → Bacteria	625
3300027895|Ga0209624_10324675	All Organisms → cellular organisms → Bacteria	1025
3300027908|Ga0209006_11168945	Not Available	603
3300028746|Ga0302233_10253158	All Organisms → cellular organisms → Bacteria	668
3300028759|Ga0302224_10408787	All Organisms → cellular organisms → Bacteria	551
3300028776|Ga0302303_10316241	All Organisms → cellular organisms → Bacteria	525
3300029911|Ga0311361_10356083	All Organisms → cellular organisms → Bacteria	1582
3300029943|Ga0311340_10932775	All Organisms → cellular organisms → Bacteria	719
3300029944|Ga0311352_10499898	All Organisms → cellular organisms → Bacteria	983
3300029951|Ga0311371_11436435	All Organisms → cellular organisms → Bacteria	774
3300029953|Ga0311343_10904600	All Organisms → cellular organisms → Bacteria	705
3300030503|Ga0311370_11159950	All Organisms → cellular organisms → Bacteria	842
3300030524|Ga0311357_11140973	All Organisms → cellular organisms → Bacteria	677
3300030688|Ga0311345_10165751	Not Available	2321
3300030746|Ga0302312_10328787	Not Available	573
3300031128|Ga0170823_17361152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747
3300031680|Ga0318574_10139091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1373
3300031715|Ga0307476_11165686	All Organisms → cellular organisms → Bacteria	565
3300031715|Ga0307476_11268825	Not Available	538
3300031720|Ga0307469_10700213	All Organisms → cellular organisms → Bacteria	918
3300031754|Ga0307475_10504137	All Organisms → cellular organisms → Bacteria	972
3300031754|Ga0307475_10707236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803
3300031763|Ga0318537_10369628	All Organisms → cellular organisms → Bacteria → Acidobacteria	529
3300031820|Ga0307473_10335824	All Organisms → cellular organisms → Bacteria	966
3300031823|Ga0307478_10453582	All Organisms → cellular organisms → Bacteria	1066
3300031823|Ga0307478_10677145	Not Available	864
3300031837|Ga0302315_10537183	Not Available	631
3300031890|Ga0306925_11220242	All Organisms → cellular organisms → Bacteria → Acidobacteria	752
3300031947|Ga0310909_10933561	All Organisms → cellular organisms → Bacteria → Acidobacteria	711
3300031962|Ga0307479_10235219	All Organisms → cellular organisms → Bacteria	1807
3300031962|Ga0307479_11727579	All Organisms → cellular organisms → Bacteria	579
3300032001|Ga0306922_11705318	All Organisms → cellular organisms → Bacteria → Acidobacteria	623
3300032174|Ga0307470_10060532	All Organisms → cellular organisms → Bacteria	1992
3300032174|Ga0307470_11944977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	501
3300032180|Ga0307471_102479459	Not Available	656
3300032180|Ga0307471_103111480	All Organisms → cellular organisms → Bacteria	588

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.44%
Aquatic	Environmental → Aquatic	4.63%
Plants	Host-Associated → Plants	0.93%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.41%
Peat	Environmental → Terrestrial → Peat	12.04%
Freshwater	Environmental → Aquatic → Freshwater	4.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.04%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental
3300029911	III_Bog_N2 coassembly	Environmental
3300029943	I_Palsa_N3 coassembly	Environmental
3300029944	II_Palsa_E1 coassembly	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300029953	II_Bog_E3 coassembly	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030524	II_Palsa_N3 coassembly	Environmental
3300030688	II_Bog_N2 coassembly	Environmental
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1015230151	3300000955	Soil	MLTRSWMLKITKAANGEVVIKLSGRMGTENLGELGKLVSAEADGRRIILDL
Ga0062385_103410202	3300004080	Bog Forest Soil	MIKITRAANGEVVFKLSGRMGPEHIAELETLLKSEPNDRHI
Ga0062387_1002661982	3300004091	Bog Forest Soil	MIKITRAANGEVVFKLSGRMGPEHIAELETLLKSEPNDRHIV
Ga0062389_1026917302	3300004092	Bog Forest Soil	MLKITRAANGAVVFKLSGRMGAENIGELEKLISAEASGRRIV
Ga0099829_112759132	3300009038	Vadose Zone Soil	VLKITRAANGEVVFKLSGRMDAENLGELDTLVREEAPCRRIVL
Ga0099830_114101611	3300009088	Vadose Zone Soil	MLKITRAANGEVVIKLSSRMDAENVSELDTLVRKEAD
Ga0099830_114213721	3300009088	Vadose Zone Soil	LLKITRAANAEVVIKLSGRMDAENIGELETLVRKEA
Ga0099828_107226482	3300009089	Vadose Zone Soil	MLKFTRTANGEVVFKVSGRMGAENVTELETLISAEASGR
Ga0075423_120606461	3300009162	Populus Rhizosphere	MRILRRGRMLKITRAANGEVVIKLSGGMGAENLGELEKLISAEADGRRIILD
Ga0126373_119704852	3300010048	Tropical Forest Soil	MLRITRAANGEVVFRLSGRMDAEGGGELERLIKAEANGRR
Ga0137391_100832412	3300011270	Vadose Zone Soil	VLKITWSANTEVVIKLSGRMDAEDLTELETLITAEAGGRRIVL
Ga0137391_111266862	3300011270	Vadose Zone Soil	MLKITRAENGDVVIKLSGRMNAENIGELETLVSEGAKGRRIVLD
Ga0137393_100804803	3300011271	Vadose Zone Soil	VLKLTRAENGGVVIKLNGRMDAENVSELETLVSEGAKSRRIVLDLSDL
Ga0137362_117426302	3300012205	Vadose Zone Soil	VLKLTRAENGEVVIKLSGRMDAENVGELETLVSEGANSRRIVLDL
Ga0137376_106427292	3300012208	Vadose Zone Soil	MLKITRAANGEVVIRLSGRMGAENLGELEKLISAEADRRRI
Ga0137360_108977353	3300012361	Vadose Zone Soil	MLKITRTANGEVVFKLSGRMGAENVTELETLISAEASGRR
Ga0137361_107017282	3300012362	Vadose Zone Soil	VLKITRAANGEVVIKLSGRMDAENIGELETLVREEA
Ga0137361_112635662	3300012362	Vadose Zone Soil	VLKLTRAENGEVVIRLSGRMDAENVGELETLVSEEAKGR
Ga0137390_101855181	3300012363	Vadose Zone Soil	VLKITRAANREVVIKLSGRMDAENVGELETLVRKEA
Ga0137358_104917862	3300012582	Vadose Zone Soil	MLKITRGANGEVVFKLSGRMDAENIDELEAVIGAEASGLRI
Ga0137358_105254872	3300012582	Vadose Zone Soil	MLRITRTANGEVVFKLSGQMSAENIGELERLFNAEASGRRI
Ga0137395_109927242	3300012917	Vadose Zone Soil	MLKITRVENGAVVFKVSGRMEAENLAEVKSLFSSESDRR
Ga0137396_105040211	3300012918	Vadose Zone Soil	MLKITRAGNGDVVIKLSGRMNVENMGELEALVSEEANGR
Ga0137394_110579392	3300012922	Vadose Zone Soil	MLKITRAASGEVVLTLSGRMDAEGIVELETLLRSEG
Ga0137359_104535251	3300012923	Vadose Zone Soil	VLKITTVVNGEVVIKLSGRMDAENIGELEALMTSGA
Ga0137359_116671622	3300012923	Vadose Zone Soil	MLKITRAANGEVVIRLSGRMGAENLGELEKLISAEADRRRIALD
Ga0187817_108425262	3300017955	Freshwater Sediment	MLKITREANGEVVFKLSGRMGAENVSELEALMSAEASGR
Ga0193731_11616791	3300020001	Soil	MVLRIQRAEDGNWAVFNLSGRMDAEHVAEIQRLFEFD
Ga0210403_102468602	3300020580	Soil	MLNSTRAANGEKVIKLSGRIGAENLGELEKLILCSVSKLG
Ga0210401_110453522	3300020583	Soil	MLKITREVNGEVVIKLSGRMETENLGELKKLVSAEAADRRVIL
Ga0210401_115776821	3300020583	Soil	MLRITRAANGEVVIKLSGRMGAENLGELEKLISAEADG
Ga0210401_115839721	3300020583	Soil	MFKITRAANGEVVFKLSGRMGAKDIGEVETLICAEASDSRIV
Ga0210406_113089862	3300021168	Soil	MLKITRAGNGEVVFKLSGRMGAENVGELERLFSAEAGGRRVVL
Ga0210400_100003018	3300021170	Soil	MLKIERIGNGNVVSKLSGRMGAENVSEFETLINAEASGRSRQ
Ga0210405_107346692	3300021171	Soil	MLKITRKANGEAVFKLSGRMDAENINELEALLSAEPNGLHIV
Ga0210405_114216821	3300021171	Soil	MLRITRAENGGVVFKLSGRMEAENVGELEKLFSAEASGRPVV
Ga0210408_104642202	3300021178	Soil	MLKITRTANEEVVFKLTGRMGAENVNELENLINAEASGRR
Ga0210408_109411732	3300021178	Soil	MLKITRIGNGEVVFKLSGRLGAENVGELERLFSAEAGRIVLDLKDLTLVD
Ga0210408_115147791	3300021178	Soil	MLKITRAANGEVVFKLSGRVDAENLAELEALIGSETKN
Ga0210396_111018392	3300021180	Soil	MLKITRAANGEVVFKLSGRMDAENLTELEMLMTSE
Ga0210397_111109562	3300021403	Soil	MLKITRAGNGEVVFKLSGRMGAENVGELERLFSAEAGSRRIVL
Ga0210389_104431602	3300021404	Soil	MLKITRTANGEVIFGLSGRMDAENVNELEALLGAEPGT
Ga0210387_111894812	3300021405	Soil	MFKITRAANGEVVFKLSGRMGAKDIGEVETLICAEA
Ga0210391_102807731	3300021433	Soil	MFKITRAANGEVVFKLSGRMGAKDIGEVETLICAEASDSRIVFDL
Ga0210390_115499881	3300021474	Soil	MLKITRAGNGEVVFKLSGRMGAENVGELERLFSAEAD
Ga0210410_115597102	3300021479	Soil	MLKITRIGNGEVVFKLSGRLGAENVGELERLFSAE
Ga0224561_10228142	3300023030	Soil	MLRITKTANGELVFKLSGRMNAENVSELEKLLRAEVSGRRIVLD
Ga0137417_11095651	3300024330	Vadose Zone Soil	MLKITRAANGQVSFKLSGRMGAENVAELETLVSAEATGQRRS
Ga0137417_14783601	3300024330	Vadose Zone Soil	MLKITRAANGEVVFKLSGRMDAKDIGEVETLISAEARAGRI
Ga0137417_14839335	3300024330	Vadose Zone Soil	VGAQITRAAHGEVVFKLSGRMGAENIGELETLFSAEASNRRIVLD
Ga0137417_14958286	3300024330	Vadose Zone Soil	VSAEDHEAANGEVVIKLSGQMDAENLTELETLMTSEADGRRIVLDLKI
Ga0208936_10573191	3300025404	Peatland	MFKITRFPNGEVVSRLSGRMDAENLGYLEALLDAESG
Ga0209154_13188132	3300026317	Soil	MLKITRAANGQVSFKLSGRMGAENVAELETLVSAEASGRRIVLD
Ga0209647_10270021	3300026319	Grasslands Soil	MLKITRAANGEVVIKLSGRMGAENISELETLISAEASG
Ga0257172_10456471	3300026482	Soil	MLKITRAANEEVVIKLSGRMGAENLGELEKLISAEADGRRIILDL
Ga0257168_10288161	3300026514	Soil	MLKITSAGNEEVVIKLSGRMGAENIGELEKLISAEADGRRIILDLKDL
Ga0257168_11211381	3300026514	Soil	VLKLTRAENGEVVIKLSGRMDAENVGELETLVSQGA
Ga0209648_100006701	3300026551	Grasslands Soil	VLRITRAANGEVVVKLSGRMNAENIGELERLVRKE
Ga0209648_103313041	3300026551	Grasslands Soil	MLKITRAANGEVVIKLSGRMRAENLGELETLISAEASG
Ga0209648_106330691	3300026551	Grasslands Soil	VLKITRAANGEVVIKLSGRMDAENLVELETLMTSEA
Ga0179593_10889873	3300026555	Vadose Zone Soil	MLKITRAANGQVSFKLSGRMGAENVAELETLVSAEKRAVAASSWI
Ga0179587_102036491	3300026557	Vadose Zone Soil	MLKITRGANGEVVFKLSGRMDAENIDELEAVIGLEASG
Ga0208365_10473361	3300027070	Forest Soil	MLKITKTASGEVVFKLSGRMGAENVGELERLFSAEAGSRRTVL
Ga0209523_10265931	3300027548	Forest Soil	MLKITRAVNGEVVIKLSGRMGEENLGELEKLISAE
Ga0209117_10851151	3300027645	Forest Soil	MLKITRAANGKVVFKLSGRIGAENVGELESQIRAEASGRRI
Ga0209118_11584051	3300027674	Forest Soil	VLKITRAANGEVVIKLSGQMNTENLGELETLVSEEAKGRRIVLDLEDLTL
Ga0209180_100528901	3300027846	Vadose Zone Soil	VLRITRTENGEVVIKLSGRMDTENMGELETLVGKEADGSR
Ga0209274_100181991	3300027853	Soil	MLKITRKANGEAVFKLSGRMDAENINELEALLSAEPN
Ga0209274_104132511	3300027853	Soil	MLKITRTANSEVVFKLSGRMDAENINELETLLSTEPR
Ga0209701_101141091	3300027862	Vadose Zone Soil	MLKITRAENGDVVIKLSGRMNAENIGELKTLVSEG
Ga0209283_102270343	3300027875	Vadose Zone Soil	VLKITRAANGEVVIKLSGRMDSENIGELETLVRKEADGRR
Ga0209283_104457401	3300027875	Vadose Zone Soil	VLKITRAAANGEVVFKLSGRLDAENLAELEKLMTSEASE
Ga0209283_107132472	3300027875	Vadose Zone Soil	VLKITRSANGEVVIKLSGRMDAEDLTELETLITAEAGGRRI
Ga0209624_103246752	3300027895	Forest Soil	MLRITKAGNGEAVFKLSGRMDAENVGELEKLLSAEAGGRRIVLD
Ga0209006_111689451	3300027908	Forest Soil	MLKITRFSNGEVVFKLSGRMDAENLEALLNAESGDGIV
Ga0302233_102531581	3300028746	Palsa	MLRITRAATGGVVFNLSGRMDAENIGELEMLLREEACESRTVLDL
Ga0302224_104087872	3300028759	Palsa	MLKITRAANGEVVFTLCGRMDAENKGELETLLSAEAS
Ga0302303_103162412	3300028776	Palsa	MLRITRAATGGVVFNLSGRMDAENIGELEMLLREEACESRTVLD
Ga0311361_103560831	3300029911	Bog	MLKITKASNGEVVFKLSGRMDAEDLGELEALLCAESSNK
Ga0311340_109327751	3300029943	Palsa	MLRIRRAANGETVFSLSGRMGAENIGEVKTMLSAEA
Ga0311352_104998981	3300029944	Palsa	MLKIRKVQNGESVFKLSGRMDSENIGEFKALLDTKATER
Ga0311371_114364353	3300029951	Palsa	MFKITRFPNGEVVSRLSGRLDAENLGYLEALLDAESGD
Ga0311343_109046002	3300029953	Bog	MLKITKASNGEVVFKLSGRMDAENLGELEALLCAESSN
Ga0311370_111599501	3300030503	Palsa	MLKITRASDGEMVLNLAGRMDTENLGELETLLSKEAGDRRI
Ga0311357_111409731	3300030524	Palsa	MLRITRAATGGVVFNLSGRMDAENIGELEMLLREEACESRTVLDLNDL
Ga0311345_101657511	3300030688	Bog	MLKITKASNGEVVFKLSGRMDAEDLGELEALLCAESSNKTI
Ga0302312_103287871	3300030746	Palsa	MLKITRFSNGEVVFRLSGRMDAENLNDLEALLNAESGD
Ga0170823_173611521	3300031128	Forest Soil	MLKLTREANAEVVIKLSGRMDAENLTELEMLMTSEADDRRIV
Ga0318574_101390911	3300031680	Soil	MLRITRAANREVVFRLSGRMDAEGLGELERLFKAE
Ga0307476_111656862	3300031715	Hardwood Forest Soil	MLKITRTANGEVVIKVSGRMVVDNLSELERLFSAEADGRRIILDVI
Ga0307476_112688251	3300031715	Hardwood Forest Soil	MLKIERIANGNVVFKQGGRMGAENVSEFEALINGG
Ga0307469_107002131	3300031720	Hardwood Forest Soil	MLKITREVNGEVVIKLSGRMGTENLGELKKLVSAEADGRCIILDLKELRL
Ga0307475_105041371	3300031754	Hardwood Forest Soil	MLKITRAANGEVVFKLSGRMGAKDIGEVETLISAEAR
Ga0307475_107072361	3300031754	Hardwood Forest Soil	MLKITRTENGEVVLKLSGRMDAEDLTELETLMTAE
Ga0318537_103696282	3300031763	Soil	MLKITRAANGEVVFKLSGRMGAENVGELERLFRAEAGSRRIV
Ga0307473_103358241	3300031820	Hardwood Forest Soil	MLKITRTANGEVVFKLSGRMGAENVTELETLISAEASGRRVVLDL
Ga0307478_104535821	3300031823	Hardwood Forest Soil	MLKITRAANGGVVIKLSGRMGAEDLGELEKLINAEAEGRRIILDL
Ga0307478_106771452	3300031823	Hardwood Forest Soil	MLQFERMANGNVAFKLSGRMGAENVSEFETLINAEATGRSRQ
Ga0302315_105371831	3300031837	Palsa	MFKITRFSNGEVVFRLSGRMDAENMGYLEALLDAESGDDIVFD
Ga0306925_112202421	3300031890	Soil	MLRITRAANEVVVFRLSGRMDAEGVGELERLFKAEASGRRIVL
Ga0310909_109335612	3300031947	Soil	MLRITRAANGEAVFRLSGRMDAESVAELERLFSAET
Ga0307479_102352192	3300031962	Hardwood Forest Soil	MLRITRAANGEVVIKLSGRMGAENLGELEKLISAEADGRR
Ga0307479_117275792	3300031962	Hardwood Forest Soil	MLKITRAANGEVVFKLSGRMGVENVGELETLFGVEASGRRI
Ga0306922_117053181	3300032001	Soil	MLRITRAANGEVVFRLSGRMDAEGVGELEGLFKAEANG
Ga0307470_100605322	3300032174	Hardwood Forest Soil	MLKITRATNGEVVFKLSGRMDAENVSELEDLFSAE
Ga0307470_119449771	3300032174	Hardwood Forest Soil	MLKIQRAANGEVVFSLIGRMDGENVAELETILSSETK
Ga0307471_1024794591	3300032180	Hardwood Forest Soil	MLKITRAANGEVVFKLSGRMDAENLTELEMLMTSEAD
Ga0307471_1031114801	3300032180	Hardwood Forest Soil	MLKITRAANGEMVIKLSGRMGAEDLGELEKLISAESDGRRI