Metagenome Family F089776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089776
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	61 residues
Representative Sequence	MDDQQPWVDHWPIWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAIEIERAWEQHRTGAGW
Number of Associated Samples	70
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.52 %
% of genes near scaffold ends (potentially truncated)	49.07 %
% of genes from short scaffolds (< 2000 bps)	81.48 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (56.481 % of family members)
Environment Ontology (ENVO)	Unclassified (90.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.96% β-sheet: 0.00% Coil/Unstructured: 63.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF05930	Phage_AlpA	14.81
PF13479	AAA_24	10.19
PF13481	AAA_25	2.78
PF00589	Phage_integrase	2.78
PF12307	DUF3631	1.85
PF03601	Cons_hypoth698	0.93
PF13518	HTH_28	0.93
PF05037	DUF669	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	14.81
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
All Organisms	root	All Organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
cellular organisms	root	All Organisms → cellular organisms	23.15 %
Viruses	superkingdom	All Organisms → Viruses	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.70 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	2.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.26 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	2.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.26 %
unclassified Oceanospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae	2.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.26 %
Oceanospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	2.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_107168404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	807	Open in IMG/M
3300005332\|Ga0066388_100509143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	1839	Open in IMG/M
3300005764\|Ga0066903_100155359	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300005764\|Ga0066903_101132771	Not Available	1446	Open in IMG/M
3300006046\|Ga0066652_101468250	Not Available	634	Open in IMG/M
3300009090\|Ga0099827_11509755	Not Available	585	Open in IMG/M
3300010398\|Ga0126383_10066200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3085	Open in IMG/M
3300010398\|Ga0126383_10084716	Not Available	2780	Open in IMG/M
3300016270\|Ga0182036_10128525	Not Available	1771	Open in IMG/M
3300016270\|Ga0182036_10825691	Not Available	756	Open in IMG/M
3300016270\|Ga0182036_11598059	Not Available	549	Open in IMG/M
3300016294\|Ga0182041_11233399	Not Available	683	Open in IMG/M
3300016319\|Ga0182033_10014837	All Organisms → cellular organisms → Bacteria → Proteobacteria	4550	Open in IMG/M
3300016319\|Ga0182033_10978753	Not Available	752	Open in IMG/M
3300016319\|Ga0182033_11616442	Not Available	586	Open in IMG/M
3300016341\|Ga0182035_10696949	Not Available	884	Open in IMG/M
3300016357\|Ga0182032_11950234	Not Available	515	Open in IMG/M
3300016371\|Ga0182034_10188844	Not Available	1584	Open in IMG/M
3300016371\|Ga0182034_10238113	Not Available	1429	Open in IMG/M
3300016371\|Ga0182034_11711281	Not Available	553	Open in IMG/M
3300016387\|Ga0182040_10652898	Not Available	856	Open in IMG/M
3300016404\|Ga0182037_10062641	Not Available	2538	Open in IMG/M
3300016404\|Ga0182037_10184970	Not Available	1603	Open in IMG/M
3300016445\|Ga0182038_10956860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	756	Open in IMG/M
3300018468\|Ga0066662_10767327	Not Available	931	Open in IMG/M
3300018482\|Ga0066669_10669577	Not Available	913	Open in IMG/M
3300031543\|Ga0318516_10211796	Not Available	1120	Open in IMG/M
3300031543\|Ga0318516_10752358	Not Available	552	Open in IMG/M
3300031545\|Ga0318541_10024196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2944	Open in IMG/M
3300031545\|Ga0318541_10173758	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
3300031545\|Ga0318541_10239411	Not Available	1008	Open in IMG/M
3300031545\|Ga0318541_10862003	Not Available	505	Open in IMG/M
3300031546\|Ga0318538_10328690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	825	Open in IMG/M
3300031546\|Ga0318538_10353447	Not Available	794	Open in IMG/M
3300031561\|Ga0318528_10047206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2169	Open in IMG/M
3300031561\|Ga0318528_10115946	Not Available	1414	Open in IMG/M
3300031561\|Ga0318528_10464041	Not Available	680	Open in IMG/M
3300031564\|Ga0318573_10145224	Not Available	1242	Open in IMG/M
3300031573\|Ga0310915_10010007	All Organisms → cellular organisms → Bacteria → Proteobacteria	5462	Open in IMG/M
3300031573\|Ga0310915_10015061	All Organisms → cellular organisms → Bacteria	4589	Open in IMG/M
3300031573\|Ga0310915_11187867	Not Available	528	Open in IMG/M
3300031679\|Ga0318561_10526202	Not Available	651	Open in IMG/M
3300031680\|Ga0318574_10148623	Not Available	1330	Open in IMG/M
3300031681\|Ga0318572_10498265	Not Available	726	Open in IMG/M
3300031713\|Ga0318496_10299972	Not Available	887	Open in IMG/M
3300031719\|Ga0306917_10802688	Not Available	738	Open in IMG/M
3300031724\|Ga0318500_10694744	Not Available	518	Open in IMG/M
3300031736\|Ga0318501_10222686	Not Available	992	Open in IMG/M
3300031736\|Ga0318501_10234684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	967	Open in IMG/M
3300031744\|Ga0306918_10231830	Not Available	1403	Open in IMG/M
3300031744\|Ga0306918_10400784	Not Available	1069	Open in IMG/M
3300031744\|Ga0306918_10828428	Not Available	722	Open in IMG/M
3300031763\|Ga0318537_10354171	Not Available	542	Open in IMG/M
3300031765\|Ga0318554_10579060	Not Available	633	Open in IMG/M
3300031765\|Ga0318554_10787455	Not Available	532	Open in IMG/M
3300031768\|Ga0318509_10751586	Not Available	540	Open in IMG/M
3300031770\|Ga0318521_10503240	Not Available	728	Open in IMG/M
3300031771\|Ga0318546_11330572	Not Available	505	Open in IMG/M
3300031781\|Ga0318547_10410947	Not Available	831	Open in IMG/M
3300031781\|Ga0318547_10746633	Not Available	609	Open in IMG/M
3300031793\|Ga0318548_10132417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1210	Open in IMG/M
3300031796\|Ga0318576_10619361	Not Available	510	Open in IMG/M
3300031797\|Ga0318550_10600462	Not Available	529	Open in IMG/M
3300031805\|Ga0318497_10542867	Not Available	652	Open in IMG/M
3300031821\|Ga0318567_10785288	Not Available	540	Open in IMG/M
3300031833\|Ga0310917_10046210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2654	Open in IMG/M
3300031835\|Ga0318517_10551463	Not Available	518	Open in IMG/M
3300031846\|Ga0318512_10426516	Not Available	668	Open in IMG/M
3300031860\|Ga0318495_10475639	Not Available	546	Open in IMG/M
3300031879\|Ga0306919_10036282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3158	Open in IMG/M
3300031879\|Ga0306919_10878886	Not Available	688	Open in IMG/M
3300031890\|Ga0306925_10023802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	6161	Open in IMG/M
3300031890\|Ga0306925_10200886	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300031890\|Ga0306925_10413022	Not Available	1445	Open in IMG/M
3300031890\|Ga0306925_10747498	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300031890\|Ga0306925_11321752	Not Available	715	Open in IMG/M
3300031890\|Ga0306925_11404257	Not Available	688	Open in IMG/M
3300031893\|Ga0318536_10302628	Not Available	811	Open in IMG/M
3300031893\|Ga0318536_10444543	Not Available	653	Open in IMG/M
3300031894\|Ga0318522_10074473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1233	Open in IMG/M
3300031897\|Ga0318520_10161015	Not Available	1307	Open in IMG/M
3300031910\|Ga0306923_10141015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2747	Open in IMG/M
3300031910\|Ga0306923_10209477	Not Available	2229	Open in IMG/M
3300031910\|Ga0306923_10438299	Not Available	1483	Open in IMG/M
3300031912\|Ga0306921_11704535	Not Available	681	Open in IMG/M
3300031912\|Ga0306921_12483018	Not Available	538	Open in IMG/M
3300031942\|Ga0310916_11048974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	679	Open in IMG/M
3300031946\|Ga0310910_10389589	Not Available	1103	Open in IMG/M
3300031947\|Ga0310909_11379416	Not Available	564	Open in IMG/M
3300032001\|Ga0306922_10055878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4095	Open in IMG/M
3300032035\|Ga0310911_10185944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1178	Open in IMG/M
3300032043\|Ga0318556_10610667	Not Available	569	Open in IMG/M
3300032051\|Ga0318532_10016083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2368	Open in IMG/M
3300032052\|Ga0318506_10087114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	1319	Open in IMG/M
3300032052\|Ga0318506_10395866	Not Available	613	Open in IMG/M
3300032055\|Ga0318575_10339256	Not Available	761	Open in IMG/M
3300032055\|Ga0318575_10484870	Not Available	628	Open in IMG/M
3300032060\|Ga0318505_10622516	Not Available	507	Open in IMG/M
3300032064\|Ga0318510_10259630	Not Available	716	Open in IMG/M
3300032066\|Ga0318514_10765209	Not Available	514	Open in IMG/M
3300032068\|Ga0318553_10090772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1549	Open in IMG/M
3300032076\|Ga0306924_12545433	Not Available	512	Open in IMG/M
3300032090\|Ga0318518_10496651	Not Available	625	Open in IMG/M
3300032091\|Ga0318577_10552792	Not Available	548	Open in IMG/M
3300032094\|Ga0318540_10464397	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.22%
Loam	Environmental → Terrestrial → Soil → Loam	2.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	90.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	56.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1071684041	3300000956	Soil	MDDQPFVDSWPLWDEPLSKVTAALDIEAAREKLARRFNRRPVRLPKAIEVERGWEEHKRRA*
Ga0066388_1005091435	3300005332	Tropical Forest Soil	MDEQPFVDSWPLWDEPLSKITAALDIAAAREKLARKFNCRPVRLSKTIEIERAWEQHNSGRR*
Ga0066903_1001553595	3300005764	Tropical Forest Soil	MADTEQPWVDHWPMWDEGLSKIRAAFDIAAAREKLTCRFNHHPARLPKAVEIERAWEQHHKGGRW*
Ga0066903_1011327713	3300005764	Tropical Forest Soil	MTTSTAGHHCAMDEQPWIDHWPMWDEPLSKITAAFDILAAREKLARRFNRRPVRLPRALEIERSWEQHKGERW*
Ga0066652_1014682501	3300006046	Soil	MDEQPFVDCWPLWDEPLSKILAAFDIDGAREKLARRFNRRPVRLPKPVEIERAWEAHRAR
Ga0099827_115097552	3300009090	Vadose Zone Soil	VDTDQPWIDCWPLWDEPLSKIPAAFDINGAREKLARRFNRRPVRLSKALEVERAWIEHNA
Ga0126383_100662006	3300010398	Tropical Forest Soil	MDDQPWVDHWPIWDEGFSKITAALDIAAARERLARKFNRRPVRLPRAVEIERAWEQHHKGGQW*
Ga0126383_100847164	3300010398	Tropical Forest Soil	MMDEQPWVDEWPVWDEPLSKINAALDIAAAREKLARGFNRHPVRLPRAVEIERAWEQHHGGRW*
Ga0182036_101285254	3300016270	Soil	EWPMWDEPLSKVNAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSGGRR
Ga0182036_108256913	3300016270	Soil	WDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0182036_115980592	3300016270	Soil	VDDTQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLSKAIEIERAWEQHARNGGR
Ga0182041_107055081	3300016294	Soil	MAEAEQPFVDHWPMWDEPLSKITAAFDIAAARVKLARRFNSKPLPRETQIDLAWKEHRR
Ga0182041_112333992	3300016294	Soil	MNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHARNGGRR
Ga0182033_100148377	3300016319	Soil	MDDQRPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGNPRR
Ga0182033_109787531	3300016319	Soil	TQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHNGGRR
Ga0182033_116164421	3300016319	Soil	MSDQPFIDNWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAVEIERA
Ga0182035_106969493	3300016341	Soil	MSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHARN
Ga0182032_119502341	3300016357	Soil	MDDQPWVDDWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0182034_101888446	3300016371	Soil	MDEQPFVDCWSLWDEGLSKIPAGLDIAAAREKLARKFNRGPVRLSKAIEDERAWEEHNASIRHS
Ga0182034_102381133	3300016371	Soil	MDDQPWVDHWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGRRG
Ga0182034_117112811	3300016371	Soil	MTRAVDDQPWVDNWPMWDEPLSKVPAAVDIAAARIKLARRFNARPLPKAIEVDLAWEAHRRR
Ga0182040_106528982	3300016387	Soil	MDQPWIDAWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHARNGGRR
Ga0182037_100626416	3300016404	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKTVEIERAWEQHGRG
Ga0182037_101849702	3300016404	Soil	MNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHNGGRR
Ga0182038_109568602	3300016445	Soil	MKDDTDQPWIDRWPTWDEPLSKFPSAFDIDAARERLARKFNRKPVRFSKAVEIK
Ga0066662_107673271	3300018468	Grasslands Soil	MDEQPFVDCWPLWDEPLSKIPAAFDIDGAREKLARRFNRRPVRLPKPVEIERAWEAHRAR
Ga0066669_106695773	3300018482	Grasslands Soil	MDEQPFVDCWPLWDEPLSKIPAAFDIDGAREKLARRFNRRPVRLPKPVEIDRAWEAHRAR
Ga0318516_102117961	3300031543	Soil	MSDQPFIDNWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAIEVDRAWEQHRTGAGW
Ga0318516_107523582	3300031543	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHQRVGNPRR
Ga0318541_100241964	3300031545	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGNPRR
Ga0318541_101737583	3300031545	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIERAWEQHSGGRR
Ga0318541_102394113	3300031545	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHGRG
Ga0318541_108620033	3300031545	Soil	GEPMDDQPYITDWPVWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0318538_103286902	3300031546	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHRRVMHD
Ga0318538_103534471	3300031546	Soil	IDNWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAIEVDRAWEQHRTGAGW
Ga0318528_100472064	3300031561	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPKAVEIERAWEQHQGVGNPRR
Ga0318528_101159463	3300031561	Soil	MTRAVDDQPWVDNWPMWDEPLSKVPAAVDIAAARIKLARRFNARPLPKAIEVDLAWDAHR
Ga0318528_104640411	3300031561	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIERAWEQHNGGRR
Ga0318573_101452243	3300031564	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHQGVGNPRR
Ga0310915_100100071	3300031573	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIE
Ga0310915_100150612	3300031573	Soil	MTSHGSTTGPTWDEPLSKIIAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0310915_111878671	3300031573	Soil	MTRAVDDQPWVDNWPMWDEPLSKVPAAVDIAAARIKLARRFNARPLPKEIEVDLAWAEHR
Ga0318561_105262023	3300031679	Soil	PWVDHWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0318574_101486233	3300031680	Soil	MSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSGGRR
Ga0318572_104982653	3300031681	Soil	SKIIAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0318496_102999722	3300031713	Soil	KIIAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0306917_108026882	3300031719	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHARNGGRR
Ga0318500_106947441	3300031724	Soil	GEIMDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFSRRPVRLPKAVEIERAWEQHQGVGNPRR
Ga0318501_102226863	3300031736	Soil	PIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0318501_102346841	3300031736	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGN
Ga0306918_102318301	3300031744	Soil	WPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0306918_104007843	3300031744	Soil	MSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQH
Ga0306918_108284283	3300031744	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIER
Ga0318537_103541712	3300031763	Soil	MSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHARNGGRR
Ga0318554_105790601	3300031765	Soil	NWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAIEVDRAWEQHRTGAGW
Ga0318554_107874553	3300031765	Soil	RGIVNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSGGRR
Ga0318509_107515861	3300031768	Soil	GIVNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHRRVMHD
Ga0318521_105032401	3300031770	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHG
Ga0318546_113305721	3300031771	Soil	MDDQPWVDDWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEI
Ga0318547_104109472	3300031781	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAIEIERAWEQHRTGAGW
Ga0318547_107466331	3300031781	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHNGGRR
Ga0318548_101324172	3300031793	Soil	MSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0318576_106193611	3300031796	Soil	FGRGEIMDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGNPRR
Ga0318550_101094843	3300031797	Soil	MKDDTDQPWIDRWPTWDEPLSKFPSAFDIDAARERLARKFNRKPVRFSKAVEIKRS
Ga0318550_106004621	3300031797	Soil	MSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLSKAIEIERAWEQHARNGGR
Ga0318497_105428673	3300031805	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPKAVEIERAWEQHQG
Ga0318567_107852881	3300031821	Soil	MTRAVDDQPWVDNWPMWDEPLSKVPAAVDIAAARIKLARRFNARPLPKATEVHLAWQEHQKMRRR
Ga0310917_100462104	3300031833	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFTRRPVRLAKAIEIERAWEQHNGGRR
Ga0318517_105514631	3300031835	Soil	VWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0318512_104265161	3300031846	Soil	TISNRSCFGRGEIMDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGNPRR
Ga0318495_104756392	3300031860	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPKAVEIERAWEQHQGVGN
Ga0306919_100362821	3300031879	Soil	MDDQPYITDWPVWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0306919_108788862	3300031879	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLSKAIEIDRAWEQHARNGGRR
Ga0306925_100238024	3300031890	Soil	MDDQPWVDHWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW
Ga0306925_102008865	3300031890	Soil	MDDQPWVDDWPIWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWE
Ga0306925_104130221	3300031890	Soil	GIMSEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLAKAIEIERAWEQHNGGRR
Ga0306925_107474982	3300031890	Soil	MDDTQPWIDEWPMWDEPLSKVNAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSGGRR
Ga0306925_113217522	3300031890	Soil	MDDQPWVDDWPIWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEIERAWEQHRTGAGW
Ga0306925_114042572	3300031890	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAACERLARKFNRKPVRLAKAIEIERAWEQHARNGGRR
Ga0318536_103026283	3300031893	Soil	MDDQPWVDHWPIWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGAGW
Ga0318536_104445432	3300031893	Soil	MSDQPFIDNWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAIEVDRAWEQHRTGAG
Ga0318522_100744734	3300031894	Soil	RDNVPSASRGGNMSDQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHQGVGNPRR
Ga0318520_101610155	3300031897	Soil	DEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAIEVDRAWEQHRTGAGW
Ga0306923_101410156	3300031910	Soil	MDQPWIDAWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHRRVMHD
Ga0306923_102094772	3300031910	Soil	MDDQPYITDWPVWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTGGGW
Ga0306923_104382991	3300031910	Soil	MDDTQPWIDEWPMWDEPLSKVNAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSG
Ga0306923_106765041	3300031910	Soil	MTRAVDDQPWVDHWPMWNEPLSKIPAAVDIAVARVKLARRFNSRPLPKEIEVDLAWQGHR
Ga0306921_117045351	3300031912	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIE
Ga0306921_124830182	3300031912	Soil	VPPSVIRRGIVNEQPWIDEWPMWDEPLSKVRAALDIAAACERLARKFNRKPVRLAKAIEIERAWEQHARNGGRR
Ga0310916_110489741	3300031942	Soil	MEIMDEQPWIDEWPTWDEPLSKINAALDIAAARERLGRKFNRRPVRLSKAIEVERAWEQHVRMARRT
Ga0310910_103895893	3300031946	Soil	TQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIERAWEQHNGGRR
Ga0310909_113794161	3300031947	Soil	PMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHARNGGRR
Ga0306922_100558781	3300032001	Soil	QPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQGVGNPRR
Ga0310911_101859443	3300032035	Soil	DQPFIDNWPLWDEPLSKITAALDIAAAREKLARRFNRRPVRLPKAVEIERAWEQHGRG
Ga0318556_106106672	3300032043	Soil	MDTQPWIDEWPMWDEPLSKVNAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHNGGRR
Ga0318532_100160832	3300032051	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFSRRPVRLPKAVEIERAWEQHQGVGNPRR
Ga0318506_100871143	3300032052	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPKAVEIERAWEQHGR
Ga0318506_103958663	3300032052	Soil	VIPGGNIVDDTQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIDRAWEQHSGGRR
Ga0318575_103392561	3300032055	Soil	MDDQPWVDHWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHH
Ga0318575_104848701	3300032055	Soil	MDEQPFVDCWSLWDEGLSKIPAGLDIAAAREKLARKFNRGPVRLSKAIEDERAW
Ga0318505_106225161	3300032060	Soil	VFKRGIMDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHRRVMHD
Ga0318510_102596303	3300032064	Soil	MDDQQPWVDHWPIWDEPLSKITAALDIAAARERLARRFNRRPVRLPEAVEIERAWEQHQG
Ga0318514_107652092	3300032066	Soil	VNEQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLAKAIEIERAWEQHRRVMHD
Ga0318553_100907725	3300032068	Soil	MDDQPYITDWPVWDEGLSKITAALDIAAAREKLARRFNRRPVRLPKAIEVERAWEQHRTG
Ga0306924_125454332	3300032076	Soil	VDDTQPWIDEWPMWDEPLSKVRAALDIAAARERLARKFNRRPVRLSKAIEIERAWEQHAR
Ga0318518_104966511	3300032090	Soil	MDDTQPWVDEWPMWDEPLSKVRAALDIAAARERLARKFNRKPVRLSKAIEIERA
Ga0318577_105527922	3300032091	Soil	MSDQPFIDNWPLWDEPLSKITAAFDIAAAREKLARRFNRRAVRLPKAVEIERAWEQHHGGRW
Ga0318540_104643971	3300032094	Soil	HWPIWDEGLSKITAALDIAAAREKLARRFNRHPVRLPRAVEIERAWEQHHGGRW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences