Metagenome Family F089756

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089756
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	59 residues
Representative Sequence	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQV
Number of Associated Samples	92
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.19 %
% of genes near scaffold ends (potentially truncated)	97.22 %
% of genes from short scaffolds (< 2000 bps)	95.37 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (34.259 % of family members)
Environment Ontology (ENVO)	Unclassified (42.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.593 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.98% β-sheet: 25.42% Coil/Unstructured: 35.59%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF16793	RepB_primase	82.41
PF00436	SSB	1.85
PF04956	TrbC	0.93
PF00437	T2SSE	0.93
PF08378	NERD	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.85
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.85
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.41 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	82.41 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	81.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	81.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	31.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	31.48 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_102564805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300005569\|Ga0066705_10900139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	525	Open in IMG/M
3300009174\|Ga0105241_12259832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300009665\|Ga0116135_1140993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	896	Open in IMG/M
3300009701\|Ga0116228_10292483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1143	Open in IMG/M
3300009709\|Ga0116227_10220190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1468	Open in IMG/M
3300010341\|Ga0074045_11018330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	520	Open in IMG/M
3300010379\|Ga0136449_100844988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1503	Open in IMG/M
3300012683\|Ga0137398_10777556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	668	Open in IMG/M
3300013104\|Ga0157370_11832253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	544	Open in IMG/M
3300014160\|Ga0181517_10365103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	746	Open in IMG/M
3300014161\|Ga0181529_10379129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	769	Open in IMG/M
3300014167\|Ga0181528_10556627	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300014169\|Ga0181531_11060921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	509	Open in IMG/M
3300014199\|Ga0181535_10635184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	611	Open in IMG/M
3300014489\|Ga0182018_10673519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300014492\|Ga0182013_10228639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1094	Open in IMG/M
3300014492\|Ga0182013_10350564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	808	Open in IMG/M
3300014492\|Ga0182013_10469450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	661	Open in IMG/M
3300014493\|Ga0182016_10482652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	719	Open in IMG/M
3300014499\|Ga0182012_10539822	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300014499\|Ga0182012_10964963	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300014654\|Ga0181525_10656584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	587	Open in IMG/M
3300014655\|Ga0181516_10679315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	533	Open in IMG/M
3300014658\|Ga0181519_10672428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	639	Open in IMG/M
3300014838\|Ga0182030_10668559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	982	Open in IMG/M
3300016404\|Ga0182037_10663583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	890	Open in IMG/M
3300017929\|Ga0187849_1373100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300017935\|Ga0187848_10183778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	905	Open in IMG/M
3300017941\|Ga0187850_10179710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	978	Open in IMG/M
3300017988\|Ga0181520_10910799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	586	Open in IMG/M
3300017988\|Ga0181520_10972273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	563	Open in IMG/M
3300017988\|Ga0181520_11137703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	510	Open in IMG/M
3300018026\|Ga0187857_10482348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	556	Open in IMG/M
3300018037\|Ga0187883_10468359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	648	Open in IMG/M
3300018044\|Ga0187890_10390630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	780	Open in IMG/M
3300018046\|Ga0187851_10242172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1059	Open in IMG/M
3300018047\|Ga0187859_10162106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1187	Open in IMG/M
3300018086\|Ga0187769_11045826	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300019786\|Ga0182025_1097445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1907	Open in IMG/M
3300020583\|Ga0210401_10887223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	751	Open in IMG/M
3300021171\|Ga0210405_10376571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1119	Open in IMG/M
3300021404\|Ga0210389_10180548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1643	Open in IMG/M
3300023091\|Ga0224559_1273062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	566	Open in IMG/M
3300023228\|Ga0224530_1024272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	789	Open in IMG/M
3300025406\|Ga0208035_1019874	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300026502\|Ga0255350_1051946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	971	Open in IMG/M
3300026502\|Ga0255350_1123058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	548	Open in IMG/M
3300027634\|Ga0209905_1014145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1070	Open in IMG/M
3300028560\|Ga0302144_10010197	All Organisms → cellular organisms → Bacteria	3062	Open in IMG/M
3300028566\|Ga0302147_10107303	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300028574\|Ga0302153_10173170	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300028745\|Ga0302267_10341972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	627	Open in IMG/M
3300028748\|Ga0302156_10220567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	881	Open in IMG/M
3300028762\|Ga0302202_10109108	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300028779\|Ga0302266_10062863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1609	Open in IMG/M
3300028779\|Ga0302266_10065581	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300028813\|Ga0302157_10478745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	653	Open in IMG/M
3300028866\|Ga0302278_10115598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1460	Open in IMG/M
3300028866\|Ga0302278_10135410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1306	Open in IMG/M
3300028867\|Ga0302146_10077110	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300028873\|Ga0302197_10091342	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300028874\|Ga0302155_10079846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1469	Open in IMG/M
3300028909\|Ga0302200_10163788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1141	Open in IMG/M
3300029817\|Ga0247275_1172896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	534	Open in IMG/M
3300029908\|Ga0311341_10559361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	647	Open in IMG/M
3300029911\|Ga0311361_10364084	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300029913\|Ga0311362_10324346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1580	Open in IMG/M
3300029918\|Ga0302143_1102459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	674	Open in IMG/M
3300029945\|Ga0311330_10043598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4934	Open in IMG/M
3300029954\|Ga0311331_10129517	All Organisms → cellular organisms → Bacteria	3098	Open in IMG/M
3300029954\|Ga0311331_10371855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1468	Open in IMG/M
3300029956\|Ga0302150_10381535	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300030007\|Ga0311338_11040530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	791	Open in IMG/M
3300030011\|Ga0302270_10064586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2455	Open in IMG/M
3300030020\|Ga0311344_11078255	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300030049\|Ga0302191_10067548	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300030049\|Ga0302191_10068603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1495	Open in IMG/M
3300030054\|Ga0302182_10427111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	553	Open in IMG/M
3300030225\|Ga0302196_10135113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1329	Open in IMG/M
3300030225\|Ga0302196_10339568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	668	Open in IMG/M
3300030399\|Ga0311353_11412897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	567	Open in IMG/M
3300030503\|Ga0311370_11035027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	911	Open in IMG/M
3300030507\|Ga0302192_10164212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	979	Open in IMG/M
3300030507\|Ga0302192_10454881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	520	Open in IMG/M
3300030508\|Ga0302185_10226888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	633	Open in IMG/M
3300030520\|Ga0311372_10219847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3136	Open in IMG/M
3300030520\|Ga0311372_11682943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	766	Open in IMG/M
3300030618\|Ga0311354_10337586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1543	Open in IMG/M
3300030688\|Ga0311345_10954458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	650	Open in IMG/M
3300030943\|Ga0311366_11045123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	706	Open in IMG/M
3300031232\|Ga0302323_102718442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	565	Open in IMG/M
3300031234\|Ga0302325_12099240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	692	Open in IMG/M
3300031236\|Ga0302324_100483578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1814	Open in IMG/M
3300031236\|Ga0302324_101015648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1126	Open in IMG/M
3300031259\|Ga0302187_10107938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1574	Open in IMG/M
3300031259\|Ga0302187_10113071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1526	Open in IMG/M
3300031524\|Ga0302320_10837718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1009	Open in IMG/M
3300031525\|Ga0302326_12095331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	727	Open in IMG/M
3300031788\|Ga0302319_10378721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1594	Open in IMG/M
3300031837\|Ga0302315_10612574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300032605\|Ga0316232_1198384	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300033402\|Ga0326728_10254450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1668	Open in IMG/M
3300033405\|Ga0326727_11266823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	507	Open in IMG/M
3300033755\|Ga0371489_0196203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1051	Open in IMG/M
3300033983\|Ga0371488_0179526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1083	Open in IMG/M
3300033983\|Ga0371488_0331297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	720	Open in IMG/M
3300034282\|Ga0370492_0055706	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.30%
Host-Associated	Host-Associated	3.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	21.30%
Plants	Host-Associated → Plants	3.70%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	55.56%
Freshwater	Environmental → Aquatic → Freshwater	20.37%
Soil	Environmental → Terrestrial → Soil	19.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%
Peat Moss	Host-Associated → Plants → Peat Moss	1.85%
Marine	Environmental → Aquatic → Marine	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	55.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	55.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.85%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	34.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.41%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.85%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023228	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T75	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1025648052	3300001213	Wetland	MNQDSHSDEKQERLQEKLRDELGPVIVSLLDRSSGLEDILVNEDSRIWVKRTG
Ga0066705_109001392	3300005569	Soil	MHLDAHSDEKQERLREKLRDELGPVIVGFLDGSSGLEDIIVNEDSRIWVKRTGSSFEQVG
Ga0105241_122598322	3300009174	Corn Rhizosphere	MHPDAHNDEKQERLREKLRDELGPVIVGLLDKASGLEDIIVNEDSRIWVKR
Ga0116135_11409931	3300009665	Peatland	MNHDSHIDEKQERLKEKLRDELGPVIVSLLDQSSGLEDILVNEDSRIWVKRTGSPFEQVGELPS
Ga0116228_102924831	3300009701	Host-Associated	MHQDFHTDEKQERLKEKLRDELGPTIVGLLDKSSGLEDIIVNEDSRIWVKRTGSPFEQV
Ga0116227_102201901	3300009709	Host-Associated	MHQDSHTDEKQERLKEKLRDELGPTIVGLLDRSSGLEDIIVNEDSRIWVKRTGSPFEQV
Ga0074045_110183301	3300010341	Bog Forest Soil	MHQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDIIVNEDSRIWVKRTGSSFEQVGELSSR
Ga0136449_1008449881	3300010379	Peatlands Soil	MNQDSHTDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGS
Ga0137398_107775561	3300012683	Vadose Zone Soil	MHTDAHSDEKQERLREKLRDELGPVIVGLLDRSSGLEDIIVNEDSRIWVKRTGSSFEQ
Ga0157370_118322532	3300013104	Corn Rhizosphere	MYPDAHNDEKQERLREKLRDELGPVIVGLLDKSSGLEDIIVNEDSRIWVKRTGSSFEQVGELSSRQARGA
Ga0181517_103651031	3300014160	Bog	MNHDSHIDEKQERLKEKLRDELGPVIVSLLDQSSGLEDILVNEDSRIWVKRTGTPFEQV
Ga0181529_103791291	3300014161	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDGSSGLEDILVNEDSRIWVKRT
Ga0181528_105566272	3300014167	Bog	VNQDSHTDEKQERLKEKLRDELGPMICGLLDQSSGIEDILVNEDCRIWVKR
Ga0181531_110609211	3300014169	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGEL
Ga0181535_106351841	3300014199	Bog	MNQDSHTDEKQERLKEKLRDELGTVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSS
Ga0182018_106735191	3300014489	Palsa	MHPDAHSDEKQERLREKLRDELGPLIVGLLDKSSGLEDIIVNEDSRIWVKRTGSS
Ga0182013_102286392	3300014492	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGS
Ga0182013_103505642	3300014492	Bog	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTGSPFE
Ga0182013_104694501	3300014492	Bog	MNQDSHSDEKQERLKEKLRDELGPVVVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVG
Ga0182016_104826521	3300014493	Bog	MNQDSHSDEKQERLKEKLRDELGPVVVGLLDRSSGLEDILVNEDSRIWVKRTG
Ga0182012_105398221	3300014499	Bog	MNHDSHTDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTSSPFEQV
Ga0182012_109649632	3300014499	Bog	MVHTSHSDEKQERLQEKLRDELGPLICGLLDQSSGIEDILVNEDCRIWVKRTGS
Ga0181525_106565842	3300014654	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSSR
Ga0181516_106793151	3300014655	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIW
Ga0181519_106724282	3300014658	Bog	MNQDSHTDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTG
Ga0182030_106685592	3300014838	Bog	MNQDSHTDEKQERLKEKLRDELGTVIVGLLDHSSGLEDILVNEDSRIWVKRTGSPFEQVGDLPSRQARG
Ga0182037_106635831	3300016404	Soil	MHPDAHSDEKQERLREKLRDELGPVIVALLDKSSGLEDIIVNEDSRIWVKR
Ga0187849_13731001	3300017929	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSSRQARG
Ga0187848_101837782	3300017935	Peatland	MQARIDGGFEGPMNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSAGLEDILVNEDSRIWVKR
Ga0187850_101797102	3300017941	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGLPFEQVG
Ga0181520_109107992	3300017988	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKR
Ga0181520_109722732	3300017988	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRT
Ga0181520_111377032	3300017988	Bog	MNQDSHTDEKQERLKEKLRDELGPVIVGLLDQSGGLEDILVNEDSRIWVKRTGSPFEQVGELP
Ga0187857_104823482	3300018026	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTG
Ga0187883_104683591	3300018037	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSS
Ga0187890_103906302	3300018044	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSP
Ga0187851_102421721	3300018046	Peatland	MVHTSHSDEKQERLQEKLRDELGRVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFE
Ga0187859_101621061	3300018047	Peatland	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELPSRQA
Ga0187769_110458262	3300018086	Tropical Peatland	MQDHHSDEKQERLKEKLRDELGPMICGLLDQSSGIEDILVNEDCRIWVKRTGSA
Ga0182025_10974453	3300019786	Permafrost	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVK
Ga0210401_108872232	3300020583	Soil	MHLDAHIDEKQERLREKLRDELGPVIVGLLDRSSGLEDIIVNEDSRIWVKRTGSSFEQVGELS
Ga0210405_103765712	3300021171	Soil	MHPDAHSDEKQERLREKLRDELGPVIVGLLDKSSGLEDIIVNEDSRIWVKRTGSSFELV
Ga0210389_101805482	3300021404	Soil	MHSDAHIDEKQERLREKLRDELGPVIVGLLDKSSGLEDIIVNEDSRIWVKRTGSSFEQVG
Ga0224559_12730622	3300023091	Soil	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTGSPFEQVGDLPSRQ
Ga0224530_10242722	3300023228	Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQV
Ga0208035_10198742	3300025406	Peatland	VNQDSHSDEKQERLKEKLRDELGPVICGLLDETNSGQSSGIEDILVNEDCRIWVKRTGSAFEHI
Ga0255350_10519462	3300026502	Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSSRQARGAM
Ga0255350_11230581	3300026502	Soil	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVK
Ga0209905_10141451	3300027634	Thawing Permafrost	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWV
Ga0302144_100101975	3300028560	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGS
Ga0302147_101073032	3300028566	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFELIGELA
Ga0302153_101731702	3300028574	Bog	MVHTSHSDEKQERLQEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFEQV
Ga0302267_103419722	3300028745	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQ
Ga0302156_102205671	3300028748	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSSLEDILVNEDSHIWVKRTGAP
Ga0302202_101091081	3300028762	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFELIGEL
Ga0302266_100628631	3300028779	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQAR
Ga0302266_100655812	3300028779	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFELIG
Ga0302157_104787452	3300028813	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVG
Ga0302278_101155982	3300028866	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGIEDILVNEDSRIWVKRTGSPFEQ
Ga0302278_101354102	3300028866	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKR
Ga0302146_100771101	3300028867	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTG
Ga0302197_100913422	3300028873	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFE
Ga0302155_100798463	3300028874	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELS
Ga0302200_101637882	3300028909	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSGGLEDILVNEDSRIWV
Ga0247275_11728961	3300029817	Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQARG
Ga0311341_105593611	3300029908	Bog	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTGSPFEQV
Ga0311361_103640841	3300029911	Bog	MVHTSHSDEKQERLQEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFEQIG
Ga0311362_103243462	3300029913	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQARG
Ga0302143_11024591	3300029918	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGE
Ga0311330_100435986	3300029945	Bog	MNQDSHTDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKR
Ga0311331_101295171	3300029954	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIW
Ga0311331_103718551	3300029954	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSR
Ga0302150_103815351	3300029956	Bog	MVHTSHSDEKQERLQEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFEQIGELVDQ
Ga0311338_110405301	3300030007	Palsa	MHQDSHSDEKQERLKEKLRDELGPTIVGLLDKSSGLEDIIVNEDSRIWVKRTGSPFEQ
Ga0302270_100645861	3300030011	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVG
Ga0311344_110782552	3300030020	Bog	MNHDLHTDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTSSPFEQVGELPSRQAR
Ga0302191_100675482	3300030049	Bog	VIQDSHSDEKQERLKEKLRDELGPVICGLLDQSSGIEDILVNEDCRIWVKRTGSAFELI
Ga0302191_100686033	3300030049	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSCR
Ga0302182_104271112	3300030054	Palsa	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWAKRTGSPFEQVGEL
Ga0302196_101351132	3300030225	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAP
Ga0302196_103395681	3300030225	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPF
Ga0311353_114128971	3300030399	Palsa	MHPDAHSDEKQERLREKLRDELGPLIVGLLDKSSGLEDIIVNEDSRIWVKRTGS
Ga0311370_110350272	3300030503	Palsa	MIQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSSRQAR
Ga0302192_101642121	3300030507	Bog	MTQDSHSDEKHERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEKVGELSSRQA
Ga0302192_104548811	3300030507	Bog	MIQDSHSDEKQERLKEKLRDELGPVIVGLLDRSAGLEDILVNEDSRIWVKRTGAPFEQVGELSSRQ
Ga0302185_102268882	3300030508	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQ
Ga0311372_102198471	3300030520	Palsa	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDKSSGLEDILVNEDSRIWVKRTGSPFE
Ga0311372_116829432	3300030520	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPF
Ga0311354_103375861	3300030618	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNGDSRIWVKRTGAPFEQVG
Ga0311345_109544581	3300030688	Bog	MNQDSHIDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTGSPFEQVGELPS
Ga0311366_110451231	3300030943	Fen	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSGGLEDILVNEDSRIWVK
Ga0302323_1027184421	3300031232	Fen	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSGGLEDILVNEDSRIWVKRTGS
Ga0302325_120992401	3300031234	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNGDSRIWVKRTGAPFEQVGELS
Ga0302324_1004835783	3300031236	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQARGA
Ga0302324_1010156481	3300031236	Palsa	MHHHQDSHTDEKQERLKEKLRDELGPVIVGLLDRSSGLEDIIVNEDSRIWVKRTGSPFEQVGELSSRQT
Ga0302187_101079382	3300031259	Bog	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELSSRQ
Ga0302187_101130711	3300031259	Bog	MIQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAP
Ga0302320_108377181	3300031524	Bog	MNQDSHSEEKQDRLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWV
Ga0302326_120953312	3300031525	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGAPFEQVGELS
Ga0302319_103787211	3300031788	Bog	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNDDSRIWVKRTGAPFEQVGELSSRQA
Ga0302315_106125742	3300031837	Palsa	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNGDSRIWVK
Ga0316232_11983842	3300032605	Freshwater	MNQDSHTDEKQERLKEKLRDELGPVIVGLLDQSSGLEDILVNEDSRIWVKRTGSPFEQVGELPSR
Ga0326728_102544503	3300033402	Peat Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQ
Ga0326727_112668232	3300033405	Peat Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDKSSGLEDILVNEDSRIWVKR
Ga0371489_0196203_891_1049	3300033755	Peat Soil	VNQDSHTDEKQERLKEKLRDELGLVICGLLDQSSGIEDILVNEDCRIWVKRTG
Ga0371488_0179526_872_1081	3300033983	Peat Soil	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQVGELSSRQ
Ga0371488_0331297_2_190	3300033983	Peat Soil	MNPHSQQDSHSDEKQERLKEKLRDELGPVIVGLLDRSSGLEDILVNEDSRIWVKRTGSPFEQV
Ga0370492_0055706_73_246	3300034282	Untreated Peat Soil	MNQDSHSDEKQERLKEKLRDELGPVIVGLLDRSGGLEDILVNEDSRIWVKRTGSPFE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089756

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences