Metagenome / Metatranscriptome Family F089727

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089727
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	70 residues
Representative Sequence	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	75.93 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (56.481 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (37.037 % of family members)
Environment Ontology (ENVO)	Unclassified (93.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.074 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1Ga0062386_1010137592 2Ga0116128_10705911 3Ga0116128_10921801 4Ga0116128_11136841 5Ga0116136_10600351 6Ga0116136_11365231 7Ga0116107_11185092 8Ga0116137_10134851 9Ga0116137_10631251 10Ga0116137_10802472 11Ga0116104_10420072 12Ga0116104_10582321 13Ga0116103_10598152 14Ga0116123_10911692 15Ga0116123_11692931 16Ga0116127_11060501 17Ga0116127_11664501 18Ga0116116_10686682 19Ga0116115_10978932 20Ga0116124_10216331 21Ga0116112_10934581 22Ga0116118_12664581 23Ga0116126_12156201 24Ga0116217_110430041 25Ga0116219_107273212 26Ga0181539_10198317 27Ga0181539_13308261 28Ga0181533_11934141 29Ga0181521_101869512 30Ga0181523_104065531 31Ga0182010_106799471 32Ga0187856_10147196 33Ga0187856_11153701 34Ga0187856_11582081 35Ga0187856_12795141 36Ga0187849_10970061 37Ga0187849_11286031 38Ga0187849_11580761 39Ga0187849_13203331 40Ga0187849_13366601 41Ga0187877_14029001 42Ga0187854_103103841 43Ga0187853_104837542 44Ga0187853_105509091 45Ga0187850_105141311 46Ga0187780_101317321 47Ga0187782_103282163 48Ga0187891_10212521 49Ga0187870_12701311 50Ga0187868_10231491 51Ga0187868_12425651 52Ga0187876_10152041 53Ga0187865_11141542 54Ga0187878_10326884 55Ga0187878_10407995 56Ga0187884_101391071 57Ga0187884_103531701 58Ga0187860_11460531 59Ga0187860_11850562 60Ga0187860_12038231 61Ga0187860_12098752 62Ga0187860_12254822 63Ga0187861_103322502 64Ga0187861_104352421 65Ga0187882_10418691 66Ga0187864_101398461 67Ga0187864_103719951 68Ga0187889_105066271 69Ga0187885_104718722 70Ga0187869_102304711 71Ga0187862_103501652 72Ga0187862_103583722 73Ga0187784_101524641 74Ga0187784_112779162 75Ga0187784_113095752 76Ga0187784_113843981 77Ga0187769_106625661 78Ga0187770_101715351 79Ga0187770_105677533 80Ga0187770_112637931 81Ga0187852_10098011 82Ga0187798_10151432 83Ga0187798_18823341 84Ga0208036_10072231 85Ga0208821_10758052 86Ga0208323_10216932 87Ga0208456_10754902 88Ga0208034_100155115 89Ga0208034_10952452 90Ga0208038_10094284 91Ga0208038_10648161 92Ga0208562_10400251 93Ga0208687_10107501 94Ga0208687_10508811 95Ga0208688_10094676 96Ga0208563_10153605 97Ga0247845_10398471 98Ga0208044_10811722 99Ga0209777_102747241 100Ga0299915_102603201 101Ga0316363_103817191 102Ga0315274_101873623 103Ga0315277_118456652 104Ga0315275_100739781 105Ga0326727_101463561 106Ga0314861_0045282_2292_2486 107Ga0371488_0021816_4456_4641 108Ga0326724_0060364_15_284
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1Ga0062386_1010137592 2Ga0116128_10705911 3Ga0116136_10600351 4Ga0187854_103103841 5Ga0187860_12254822 6Ga0187784_112779162 7Ga0299915_102603201 8Ga0315274_101873623 9Ga0315277_118456652
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1Ga0062386_1010137592 2Ga0116128_10705911 3Ga0116136_10600351 4Ga0187854_103103841 5Ga0187860_12254822 6Ga0187784_112779162 7Ga0299915_102603201 8Ga0315274_101873623 9Ga0315277_118456652
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.94% β-sheet: 0.00% Coil/Unstructured: 22.06%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01546	Peptidase_M20	12.04
PF07687	M20_dimer	4.63
PF04028	DUF374	4.63
PF14294	DUF4372	3.70
PF01850	PIN	3.70
PF09957	VapB_antitoxin	2.78
PF04221	RelB	1.85
PF00654	Voltage_CLC	1.85
PF03576	Peptidase_S58	1.85
PF00571	CBS	1.85

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COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	4.63
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	3.70
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	1.85
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	1.85
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	1.85
COG0764	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	Lipid transport and metabolism [I]	0.93
COG2124	Cytochrome P450	Defense mechanisms [V]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	43.52 %
Unclassified	root	N/A	56.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	43.52 %
Unclassified	root	N/A	56.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.52 %
Unclassified	root	N/A	56.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
Unclassified	root	N/A	56.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.70 %
Unclassified	root	N/A	56.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.70 %
Unclassified	root	N/A	56.48 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.52 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1.85 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.93 %
Unclassified	root	N/A	56.48 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.52 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1.85 %
Deltaproteobacteria bacterium RBG_13_61_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_61_14	2.78 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.93 %
Unclassified	root	N/A	56.48 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101013759	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300009518\|Ga0116128_1070591	Not Available	1068	Open in IMG/M
3300009518\|Ga0116128_1092180	Not Available	902	Open in IMG/M
3300009518\|Ga0116128_1113684	Not Available	791	Open in IMG/M
3300009547\|Ga0116136_1060035	Not Available	1044	Open in IMG/M
3300009547\|Ga0116136_1136523	Not Available	625	Open in IMG/M
3300009548\|Ga0116107_1118509	Not Available	763	Open in IMG/M
3300009549\|Ga0116137_1013485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3253	Open in IMG/M
3300009549\|Ga0116137_1063125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300009549\|Ga0116137_1080247	Not Available	990	Open in IMG/M

Showing 1 to 10 of 103 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	78.70%
Terrestrial	Environmental → Terrestrial	21.30%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	78.70%
Peat	Environmental → Terrestrial → Peat	3.70%
Soil	Environmental → Terrestrial → Soil	17.59%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	2.78%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	75.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	42.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	32.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.70%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	37.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	32.41%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.26%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1010137592	3300004152	Bog Forest Soil	PQDQVALSYAKSLAALEYLRADYDMSEICNLLKAMPAQPDFSLLLRNELHLTYPAFEQEVANYLVKKYGT*
Ga0116128_10705911	3300009518	Peatland	AKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT*
Ga0116128_10921801	3300009518	Peatland	AKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116128_11136841	3300009518	Peatland	MPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT*
Ga0116136_10600351	3300009547	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT*
Ga0116136_11365231	3300009547	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116107_11185092	3300009548	Peatland	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT*
Ga0116137_10134851	3300009549	Peatland	AYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT*
Ga0116137_10631251	3300009549	Peatland	LAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT*
Ga0116137_10802472	3300009549	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116104_10420072	3300009614	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTSDMVEIRNLLKAMPSQPDFGVLLQVELRLSYPDFEQEVANYIVKKYGT*
Ga0116104_10582321	3300009614	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT*
Ga0116103_10598152	3300009615	Peatland	LAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT*
Ga0116123_10911692	3300009617	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT*
Ga0116123_11692931	3300009617	Peatland	FLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116127_11060501	3300009618	Peatland	PDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT*
Ga0116127_11664501	3300009618	Peatland	RTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116116_10686682	3300009621	Peatland	SLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0116115_10978932	3300009631	Peatland	NMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT*
Ga0116124_10216331	3300009634	Peatland	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT*
Ga0116112_10934581	3300009636	Peatland	QVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT*
Ga0116118_12664581	3300009637	Peatland	SLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT*
Ga0116126_12156201	3300009640	Peatland	QALEGPFLNMPQDQVALSYAKSLAALEYLRANYDMGEICNLLKAMPAQPDFSLLLRNELHLTYPAFEQEVANYLVKKYGT*
Ga0116217_110430041	3300009700	Peatlands Soil	MPQDQVALVYAKSLAALEYLQTTFDMGEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYLVKKYGT*
Ga0116219_107273212	3300009824	Peatlands Soil	NMPQDQVALVYAKSLAALEYLQTTFDMGEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYLVKKYGT*
Ga0181539_10198317	3300014151	Bog	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT*
Ga0181539_13308261	3300014151	Bog	LEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT*
Ga0181533_11934141	3300014152	Bog	KSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT
Ga0181521_101869512	3300014158	Bog	LEGPFLNMPQDQVALSYAKSLAALEYLRANYDMGEICNLLKAMPAQPDFSLLLRNELHLTYPAFEQEVANYLVKKYGT*
Ga0181523_104065531	3300014165	Bog	QVALSYAKSLAALEYLRANYDMGEICNLLKDMPAQPDFSLLLQNELHLTYPAFEQEVANYLVKKYGT*
Ga0182010_106799471	3300014490	Fen	SFQSLEGPFLNMPQDQVALVYAKSLAALEYLRTTFDMGEIRNLLNAMPSQPDFGVLLQNELHLSYPAFEQEVANYLVKKYGS*
Ga0187856_10147196	3300017925	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187856_11153701	3300017925	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0187856_11582081	3300017925	Peatland	VALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187856_12795141	3300017925	Peatland	LEGPFLNMPQDQVALVYAKSLAALEYLRTTFDMGEIRNLLNAMPSQPDFGVLLQDELHLSYPAFEQDVADYLVKKYGP
Ga0187849_10970061	3300017929	Peatland	PDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187849_11286031	3300017929	Peatland	AKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYG
Ga0187849_11580761	3300017929	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187849_13203331	3300017929	Peatland	AKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYG
Ga0187849_13366601	3300017929	Peatland	LAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187877_14029001	3300017931	Peatland	PSFPSLEGPFLNMPQDQVALAYAKSLAALEYLRTASDMVEIRNLLKAMPSQPDFGVLLQVELRLSYPDFEQEVANYIVKKYGT
Ga0187854_103103841	3300017938	Peatland	LPQDQVGLAYAKSLAGLEYLRDTFGMGEIRRMLKLLPSSDFNTLLENELRLSYPAFEEEVANYIVKRYGS
Ga0187853_104837542	3300017940	Peatland	MPQDQVALSYAKSLAALEYLRANYDMGEICNLLKDMPAQPDFSLLLQNELHLTYPAFEQEVANYLVKKYGT
Ga0187853_105509091	3300017940	Peatland	EYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187850_105141311	3300017941	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMAEIRNLLKALPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT
Ga0187780_101317321	3300017973	Tropical Peatland	LPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187782_103282163	3300017975	Tropical Peatland	PSFQALEGPFLNMPQDQVALAYAKSLAALEYLRSAFDMGEICNLLKALPSQPDFSALLQNELHLSYPAFEQEVTDYLVKKYGT
Ga0187891_10212521	3300017996	Peatland	SLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYWT
Ga0187870_12701311	3300017998	Peatland	PFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0187868_10231491	3300018002	Peatland	LEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187868_12425651	3300018002	Peatland	PSLEDTYPNRPQHQVPLAYAKSLAALEYLQTTFDMAEIRNLLKAMPSQPDFGVLLQAELRLSYPAFEQEVANYVVKKYGT
Ga0187876_10152041	3300018003	Peatland	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187865_11141542	3300018004	Peatland	EGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0187878_10326884	3300018005	Peatland	LPSFPSLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMAEIRNLLKALPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT
Ga0187878_10407995	3300018005	Peatland	LAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT
Ga0187884_101391071	3300018009	Peatland	GPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0187884_103531701	3300018009	Peatland	DQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187860_11460531	3300018014	Peatland	NMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0187860_11850562	3300018014	Peatland	ALEYLRTTSDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT
Ga0187860_12038231	3300018014	Peatland	ALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187860_12098752	3300018014	Peatland	LEYLRTTSDMVEIRNLLKAMPSQPDFGVLLQAELRLSYPAFEQEVANYVVKKYGT
Ga0187860_12254822	3300018014	Peatland	GGHLPSFQALEGPFLNMPQDQVALSYAKSLAALEYLRANFGMDEICTLLKAMPSQPDFSLLLQNELHLTYPAFEQEVANYLVKKYGT
Ga0187861_103322502	3300018020	Peatland	SFPSLEGPFLNMPQDQVALAYAKSLAALEYLRTASDMVEIRNLLKAMPSQPDFGVLLQVELRLSYPDFEQEVANYIVKKYGT
Ga0187861_104352421	3300018020	Peatland	AKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYG
Ga0187882_10418691	3300018021	Peatland	VATGRLPSFPSLEGPFLNMPQDQVALAYAKSLAALEYLRTTSDMVEIRNLLKAMPSQPDFGVLLQVELRLSYPDFEQEVANFIVKKYGT
Ga0187864_101398461	3300018022	Peatland	QVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187864_103719951	3300018022	Peatland	LEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187889_105066271	3300018023	Peatland	LSYAKSLVALEYLRANYGMDEICALLKAMPSQPDFSLLLQTILRLTYPAFEQEVANYLVKKYGT
Ga0187885_104718722	3300018025	Peatland	AGGHLPSFQALEGPFLNMPQDQVALSYAKSLVALEYLRANYGMDEICALLKAMPSQPDFSLLLQTILRLTYPAFEQEVANYLVKKYGT
Ga0187869_102304711	3300018030	Peatland	ALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187862_103501652	3300018040	Peatland	FQALEGPFLNMPQDQVALSYAKSLAALEYLRANFGMDEICTLLKAMPSQPDFSLLLQNELHLTYPAFEQEVANYLVKKYGT
Ga0187862_103583722	3300018040	Peatland	LNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0187784_101524641	3300018062	Tropical Peatland	PFLNMPQDQVALAYAKSLAALEYLRTTFDMGEICSLLKAMPSQSDFSVLLQNELHLSYPAFEQEVANYLVKKYGT
Ga0187784_112779162	3300018062	Tropical Peatland	PQDEAVLAYGKSLAALEYLRSTFDMGEIRRLLKAIPSQPDFGAVLQDELRLSYSAFEQEVDSYLVKKYGT
Ga0187784_113095752	3300018062	Tropical Peatland	FQALEGPFLNMPQDQVALSYAKSLAALEYLRANFGMDEICTLLKAMPSQPDFGLLLQDELQFTYPAFEQEVANYLVKKYGT
Ga0187784_113843981	3300018062	Tropical Peatland	DQVGLVYAKSLAALEYLRTAYDMGEICRLLKAMPSQPDFGVLLQNELRLSYPAFEQEVDNYIVKKYGT
Ga0187769_106625661	3300018086	Tropical Peatland	LPSLPSLEGPFLNLPQNQVALAYAKSLAALEYLRNNFDMVEIRNLLRAMPSQPDFGALLQDELRLSYPAFEQEVANYIVKKYGT
Ga0187770_101715351	3300018090	Tropical Peatland	KSLAAIEYLRANFGMDEIRNLLKAMPTQPDVAVLLQDQLHLSYPAFEQEVANYLVRKYGT
Ga0187770_105677533	3300018090	Tropical Peatland	ALEYLRTMYDMSEICNLLKAMPSQPDFGVLLQDRLRLTYPAFEQAVTDYIVKKYGT
Ga0187770_112637931	3300018090	Tropical Peatland	AAIEYLRANFGMDEIRNLLKAMPTQPDVAVLLQDQLHLSYPAFEQEVANYLVKKYGT
Ga0187852_10098011	3300019082	Peatland	LEGPFLNMPPDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0187798_10151432	3300019275	Peatland	LAYAKSLAALEYLRSTSDMGQIRNLLKAMPSQPDFAVLLQDELHLTYPAFEQEVANYLVKKYGT
Ga0187798_18823341	3300019275	Peatland	PFLNMPQDQVALAYAKSLAALEYLRTNFDMGEICNLLKAMPSQPDFSVLLQNELHLSYPAFEQEVANYLVKKYGT
Ga0208036_10072231	3300025419	Peatland	AYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFEQEVANYIVKKYGT
Ga0208821_10758052	3300025432	Peatland	GPFLNMPQDQVALSYAKSLAALEYLRANYDMGEICNLLKAMPAQPDFSLLLRNELHLTYPAFEQEVANYLVKKYGT
Ga0208323_10216932	3300025439	Peatland	YAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT
Ga0208456_10754902	3300025441	Peatland	LAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGILLQDELRLSYPAFDQEVANYIVKKYGT
Ga0208034_100155115	3300025442	Peatland	NMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0208034_10952452	3300025442	Peatland	PSLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0208038_10094284	3300025446	Peatland	NMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKVMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0208038_10648161	3300025446	Peatland	FLNMPPDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT
Ga0208562_10400251	3300025460	Peatland	AYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYIVKKYGT
Ga0208687_10107501	3300025469	Peatland	AVGTGSLPSFPSLEGPFLNMPPDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPDFGVLLQDELRLSYPAFDQEVANYIVKKYGT
Ga0208687_10508811	3300025469	Peatland	MPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPSQPNFGVLLQDELRLSYPAFEQEVANFIVKKYGT
Ga0208688_10094676	3300025480	Peatland	QDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT
Ga0208563_10153605	3300025501	Peatland	PFFASLEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMVEIRNLLKAMPAHPDFGVLLQDELRLSYPAFEQEIANYIVKKYGT
Ga0247845_10398471	3300026451	Soil	EGPFLNMPQDQVALVYAKSLAALEYLRTTFDMGEIRNLLNAMPSQPDFGVLLQNELHLSYPAFEQEVANYLVKKYGS
Ga0208044_10811722	3300027625	Peatlands Soil	PFLNMPQDQVALSYAKSLAALEYLRANFGMDEICALLKAMPSQPDFSLLLQNELHLTYPAFEQEVANYLVKKYGT
Ga0209777_102747241	3300027896	Freshwater Lake Sediment	DQVALAYAKSLAALEYLRTTSDMVEIRNLLKAMPSQPDFGVLLQVELRLSYPDFEQEVANYIVKKYGT
Ga0299915_102603201	3300030613	Soil	VNDHLPPFSALETSFLNLPADQVGLAYAKSLAALEYLRDTYGLGEISRLLKMMPANPNFNSLLQDELRLSYTAFEQEVANYIVKRYGA
Ga0316363_103817191	3300030659	Peatlands Soil	ALEYLQTTFDMGEIRNLLKAMPSQPDFGVLLQDELHLSYPAFEQEVANYLVKKYGT
Ga0315274_101873623	3300031999	Sediment	SLAALEYLRDTFGMGEIRRLLKALPGNTDLNSLLQDEIRLSYPAFEQEVANYIVKRYGA
Ga0315277_118456652	3300032118	Sediment	VGLAYAKSLAALEYLRDTYGLGEIRRLLKFIPANPNLNSLFQDELRLNYPAFEQEVANYIVKRYGS
Ga0315275_100739781	3300032401	Sediment	KSLAALEYLRDTYGLGEIRRLLKFIPANPNLNSLLQDELHLNYPAFEQEVANYIVKRYGS
Ga0326727_101463561	3300033405	Peat Soil	LEYLRTTFDVGEIRNLLKAMPSQPDFGVLLQDELHLTYPAFEQEVANYLVKKYGT
Ga0314861_0045282_2292_2486	3300033977	Peatland	LAYAKSLAALEYLRTTFDMGEIRNLLKAMPSQPHFGVLLQDELHLSYPAFEQEVTNYILKKYGK
Ga0371488_0021816_4456_4641	3300033983	Peat Soil	AKSLAAIEYLRANVGMDEIRNLLKAMPSQPDVALLLQDQLHLSYPAFEQEVANYLVKKYG
Ga0326724_0060364_15_284	3300034091	Peat Soil	MAVGHLPSFQALEGPFLNMPQDQVALAYAKSLAALEYLRTTFDMSEICNFLKAMPSQPDFSVLLQNELHLTYPAFEQEVANYLVKKYGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089727

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences