Metagenome Family F089713

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089713
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	50 residues
Representative Sequence	MRASVGGRDELAARVQQALALPTKKEAEHVVDVVIGSLEATLLNNLGTDGFTLKL
Number of Associated Samples	94
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.59 %
% of genes near scaffold ends (potentially truncated)	95.37 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.630 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.37% β-sheet: 0.00% Coil/Unstructured: 56.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00589	Phage_integrase	1.85
PF03951	Gln-synt_N	1.85
PF05448	AXE1	0.93
PF05721	PhyH	0.93
PF08423	Rad51	0.93
PF01750	HycI	0.93
PF03695	UPF0149	0.93
PF12680	SnoaL_2	0.93
PF13592	HTH_33	0.93
PF01113	DapB_N	0.93
PF15780	ASH	0.93
PF16694	Cytochrome_P460	0.93
PF00043	GST_C	0.93
PF01496	V_ATPase_I	0.93
PF08401	ArdcN	0.93
PF05726	Pirin_C	0.93
PF13414	TPR_11	0.93
PF03916	NrfD	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	1.85
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.93
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.93
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0680	Ni,Fe-hydrogenase maturation factor	Energy production and conversion [C]	0.93
COG1269	Archaeal/vacuolar-type H+-ATPase subunit I/STV1	Energy production and conversion [C]	0.93
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.93
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.93
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.93
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.93
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
All Organisms	root	All Organisms	45.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.70 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.93 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.78 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.93 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.15 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.93 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.15 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.93 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.15 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.93 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10076865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1605	Open in IMG/M
3300000567\|JGI12270J11330_10299673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300004080\|Ga0062385_10299118	Not Available	921	Open in IMG/M
3300004082\|Ga0062384_101366343	Not Available	520	Open in IMG/M
3300004091\|Ga0062387_100450270	Not Available	884	Open in IMG/M
3300004091\|Ga0062387_100869521	Not Available	679	Open in IMG/M
3300004152\|Ga0062386_101406902	Not Available	581	Open in IMG/M
3300004635\|Ga0062388_102184010	Not Available	576	Open in IMG/M
3300005445\|Ga0070708_100049803	All Organisms → cellular organisms → Bacteria	3707	Open in IMG/M
3300005591\|Ga0070761_10398400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300005591\|Ga0070761_10590939	Not Available	690	Open in IMG/M
3300006059\|Ga0075017_101185553	Not Available	598	Open in IMG/M
3300009524\|Ga0116225_1296532	Not Available	722	Open in IMG/M
3300009525\|Ga0116220_10572911	Not Available	517	Open in IMG/M
3300009552\|Ga0116138_1195582	Not Available	558	Open in IMG/M
3300009683\|Ga0116224_10378858	Not Available	673	Open in IMG/M
3300009839\|Ga0116223_10179325	Not Available	1304	Open in IMG/M
3300010341\|Ga0074045_10984168	Not Available	531	Open in IMG/M
3300010343\|Ga0074044_10361004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300010366\|Ga0126379_12455209	Not Available	620	Open in IMG/M
3300010373\|Ga0134128_10926856	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300011270\|Ga0137391_10587462	Not Available	935	Open in IMG/M
3300012202\|Ga0137363_10720262	Not Available	845	Open in IMG/M
3300012683\|Ga0137398_10113164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1723	Open in IMG/M
3300012925\|Ga0137419_11001348	Not Available	692	Open in IMG/M
3300014151\|Ga0181539_1141626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300014199\|Ga0181535_10190542	Not Available	1264	Open in IMG/M
3300014489\|Ga0182018_10060302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2293	Open in IMG/M
3300014489\|Ga0182018_10174202	Not Available	1217	Open in IMG/M
3300014501\|Ga0182024_10344318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1950	Open in IMG/M
3300015054\|Ga0137420_1373409	Not Available	2348	Open in IMG/M
3300016371\|Ga0182034_10141004	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300016404\|Ga0182037_11101283	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300017822\|Ga0187802_10049190	Not Available	1538	Open in IMG/M
3300017933\|Ga0187801_10431022	Not Available	551	Open in IMG/M
3300017933\|Ga0187801_10431757	Not Available	551	Open in IMG/M
3300017935\|Ga0187848_10210422	Not Available	833	Open in IMG/M
3300017941\|Ga0187850_10287369	Not Available	732	Open in IMG/M
3300017943\|Ga0187819_10827596	Not Available	519	Open in IMG/M
3300017948\|Ga0187847_10436468	Not Available	722	Open in IMG/M
3300017955\|Ga0187817_10067198	All Organisms → cellular organisms → Bacteria → Acidobacteria	2226	Open in IMG/M
3300017972\|Ga0187781_11011040	Not Available	608	Open in IMG/M
3300017975\|Ga0187782_11561352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300017988\|Ga0181520_10249940	Not Available	1356	Open in IMG/M
3300017995\|Ga0187816_10563130	Not Available	513	Open in IMG/M
3300018001\|Ga0187815_10076388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	1408	Open in IMG/M
3300018020\|Ga0187861_10172872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300018023\|Ga0187889_10489628	Not Available	525	Open in IMG/M
3300018024\|Ga0187881_10482638	Not Available	504	Open in IMG/M
3300018033\|Ga0187867_10626299	Not Available	588	Open in IMG/M
3300018037\|Ga0187883_10101487	Not Available	1495	Open in IMG/M
3300018040\|Ga0187862_10319893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300018042\|Ga0187871_10098812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1684	Open in IMG/M
3300018047\|Ga0187859_10860118	Not Available	522	Open in IMG/M
3300018057\|Ga0187858_10750300	Not Available	580	Open in IMG/M
3300018062\|Ga0187784_10658883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300018085\|Ga0187772_10600040	Not Available	783	Open in IMG/M
3300018085\|Ga0187772_11102069	Not Available	582	Open in IMG/M
3300018088\|Ga0187771_10000840	All Organisms → cellular organisms → Bacteria	19608	Open in IMG/M
3300018088\|Ga0187771_11204675	Not Available	642	Open in IMG/M
3300018090\|Ga0187770_10206653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300018090\|Ga0187770_10675905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	823	Open in IMG/M
3300018090\|Ga0187770_11310090	Not Available	587	Open in IMG/M
3300018090\|Ga0187770_11428134	Not Available	562	Open in IMG/M
3300019888\|Ga0193751_1180207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	728	Open in IMG/M
3300020580\|Ga0210403_10704628	Not Available	809	Open in IMG/M
3300020582\|Ga0210395_10381821	All Organisms → cellular organisms → Bacteria → Acidobacteria	1060	Open in IMG/M
3300020582\|Ga0210395_10594260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300021171\|Ga0210405_10447705	Not Available	1015	Open in IMG/M
3300021402\|Ga0210385_10340814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300021405\|Ga0210387_10064162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2988	Open in IMG/M
3300021407\|Ga0210383_10993153	Not Available	712	Open in IMG/M
3300021474\|Ga0210390_11158624	Not Available	626	Open in IMG/M
3300024330\|Ga0137417_1047147	Not Available	1496	Open in IMG/M
3300025915\|Ga0207693_10531848	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300026482\|Ga0257172_1047220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300026514\|Ga0257168_1077233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300026528\|Ga0209378_1295396	Not Available	518	Open in IMG/M
3300027643\|Ga0209076_1090501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300027737\|Ga0209038_10090311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027783\|Ga0209448_10268330	Not Available	562	Open in IMG/M
3300027867\|Ga0209167_10442458	Not Available	710	Open in IMG/M
3300027903\|Ga0209488_10689401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300027905\|Ga0209415_10440627	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300027911\|Ga0209698_10018406	All Organisms → cellular organisms → Bacteria → Proteobacteria	6703	Open in IMG/M
3300027911\|Ga0209698_10236782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1463	Open in IMG/M
3300027986\|Ga0209168_10604183	Not Available	524	Open in IMG/M
3300028047\|Ga0209526_10759263	Not Available	605	Open in IMG/M
3300029944\|Ga0311352_11040897	Not Available	628	Open in IMG/M
3300030659\|Ga0316363_10213208	Not Available	799	Open in IMG/M
3300031236\|Ga0302324_102540454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300031525\|Ga0302326_11926375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300031708\|Ga0310686_115395390	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300031754\|Ga0307475_10797555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300031823\|Ga0307478_10009254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6758	Open in IMG/M
3300031823\|Ga0307478_10336619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300031942\|Ga0310916_11256620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300031962\|Ga0307479_10608959	All Organisms → Viruses → Predicted Viral	1074	Open in IMG/M
3300032160\|Ga0311301_12001568	Not Available	676	Open in IMG/M
3300032770\|Ga0335085_10059521	All Organisms → cellular organisms → Bacteria	5109	Open in IMG/M
3300032770\|Ga0335085_10361157	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300032782\|Ga0335082_10017048	All Organisms → cellular organisms → Bacteria	7870	Open in IMG/M
3300032829\|Ga0335070_11289750	Not Available	669	Open in IMG/M
3300032892\|Ga0335081_10774112	Not Available	1151	Open in IMG/M
3300032954\|Ga0335083_10036803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5365	Open in IMG/M
3300033158\|Ga0335077_11609742	Not Available	617	Open in IMG/M
3300033561\|Ga0371490_1137877	Not Available	613	Open in IMG/M
3300033808\|Ga0314867_057841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.52%
Aquatic	Environmental → Aquatic	31.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.81%
Freshwater	Environmental → Aquatic → Freshwater	28.70%
Peat	Environmental → Terrestrial → Peat	3.70%
Sediment	Environmental → Aquatic → Sediment	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.22%
Loam	Environmental → Terrestrial → Soil → Loam	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.19%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.19%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100768651	3300000567	Peatlands Soil	MRESLRMGRDELAGRVQQALNLPTKKEAEHIVNTVISCIEHTLLNNLGMNGFTM
JGI12270J11330_102996731	3300000567	Peatlands Soil	MRASLGGRDELAVRVQRALFLPTKKEAEHVVNTLIQSLETTLLNHLDTDGFT
Ga0062385_102991181	3300004080	Bog Forest Soil	MRASLRGRDELAARVQQALALPTKKEAEQVVEAVIGSLEATLLNNLGTHGFTLKL
Ga0062384_1013663432	3300004082	Bog Forest Soil	MRASLRGREELTARVQTALSLATKKEAEHVVNAVIGSLETTLLNHLGTDGFVIPDRKG
Ga0062387_1004502702	3300004091	Bog Forest Soil	MRASLRGREELTARVQTALSLATKKEAEHVVNAVIGSLETTLLNHLGTDGFVIP
Ga0062387_1008695211	3300004091	Bog Forest Soil	MKASLRGREELAERVQQTLALPTKKEAEMVVDVVVGALEATLLDNLGTDGF
Ga0062386_1014069022	3300004152	Bog Forest Soil	MRASLSGRYELASRVQQSLALTTKKEAEHVVNAVIDSLEATLLNNLGADGFT
Ga0062388_1021840102	3300004635	Bog Forest Soil	MSASVGGREELVVRVQQALALPTKKEAEYIVDTVIGSLEATL
Ga0070708_1000498035	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRASVSGRQELAARVQTALSLPTKKEAEMVADAVIAALEATLLNNLGTDGFTLKL
Ga0070761_103984002	3300005591	Soil	MRASLKGREELVVRVQQALALPTKKEAEMAVETVVAALEATLLNNL
Ga0070761_105909391	3300005591	Soil	MQASLRGREELAARVQQALALPTKKEAEHVVELVIGSLEA
Ga0075017_1011855531	3300006059	Watersheds	MRASVGGRDELTSRVQRALMLPTKKQAGQIVDVVVDSLEA
Ga0116225_12965322	3300009524	Peatlands Soil	MRASVGGREELVVRVQQALALPTKKEAEMVVDTVVAALEATLLNNLAT
Ga0116220_105729112	3300009525	Peatlands Soil	LVGRVQAALYLSTKKEAENVVNTVVSGIEHTLLNNLEKNGFTIKLN
Ga0116138_11955821	3300009552	Peatland	MRASVGGRNELAARVQRALALLTKKEAEHIVNVVVGCIEATLL
Ga0116224_103788582	3300009683	Peatlands Soil	MRASVRGRDELAARVQQALLLPTKKQAEQIVDVVIDSLEATLLNNLGTNGFALKLNSFG
Ga0116223_101793251	3300009839	Peatlands Soil	MRASVGGRDELAARVQQALMLPTKKQAEQIVNVVIASLESTLLNNLATNGFTLKLGSFGK
Ga0074045_109841681	3300010341	Bog Forest Soil	MRASLGARDELATRDQTALSLPTKKEAEMVVETVIAALEA
Ga0074044_103610041	3300010343	Bog Forest Soil	MNCMRASLEEGRQELNVRVQQALALATKKEAETVVDAVVGALE
Ga0126379_124552091	3300010366	Tropical Forest Soil	MRASLRGREELAARVQRALALATKKEAEMVVDTVVA
Ga0134128_109268562	3300010373	Terrestrial Soil	MRASASGRQELAARVQQALVLPTKKEAEMVVGTVVAALEATLLNNL
Ga0137391_105874622	3300011270	Vadose Zone Soil	MGTLSFERNLNYMRASIRGRDELAVRVQAALSLPTKKEAEHVVSVLIQSLETTLLKNLQTDGFTLKVNGFGKF
Ga0137363_107202621	3300012202	Vadose Zone Soil	MRASIKGRDELAETVQTALSLRTKKEAKYVVNAVIMSLETTLLNNLDTD
Ga0137398_101131641	3300012683	Vadose Zone Soil	MRASLKGRDELAVRVQTSLSLPTKKEAEHVVNAVITSLETTLLNHLGTDGFTLKLNGFGK
Ga0137419_110013481	3300012925	Vadose Zone Soil	MNCMGASLRGREELIARVQQVLWLATKKEAEMVVETVVAALEATL
Ga0181539_11416261	3300014151	Bog	MRASVEGRNELAARVQQVLALPTKKEAEMVVDTVVTALEATLLNNLGVDGFTLKLGSFGK
Ga0181535_101905422	3300014199	Bog	MRASVRGRDELAVRVQQALALLTKKEAEHIVNVIVSCVEATLLNN
Ga0182018_100603021	3300014489	Palsa	MQASLRGRDELAVRVQQALMLPTKKEAQHVVDAVV
Ga0182018_101742021	3300014489	Palsa	MRARLRGRDELVVRLQQALALPTKKEAEYIVDAVTGSLEATLLNNLDANGFTLN
Ga0182024_103443181	3300014501	Permafrost	MRASLKGREELVTRVQKVLVLSTKKEAEVIVIAVVSCLECALLNNLGTDGFTLKLGSFGKFSVRHKRCVFLG*
Ga0137420_13734091	3300015054	Vadose Zone Soil	MRASIEGRVELTERVQRSLALPTKKEAEHVVNAVIGSLETTLLNNLGTDG
Ga0182034_101410041	3300016371	Soil	MRASVSGQQELAMRVQQALALATKKEAQMVVDAVVTG
Ga0182037_111012831	3300016404	Soil	MRASLQGREELAGRVKQALALSTKKEAEIVVDTVVTALESTLLNNL
Ga0187802_100491902	3300017822	Freshwater Sediment	VRASPEGRDELSERVQRVLSLPTKKEAENVVSAVILSLET
Ga0187801_104310221	3300017933	Freshwater Sediment	VRASPEGRDELSERVQRALSLPTKKEAEHVVNTVIASLETTLLNNLGTDG
Ga0187801_104317572	3300017933	Freshwater Sediment	MRASVGGREELAVRVQQALALPTKKEAEMVVDTVVAALEATLLNNLEMNGFTLKLGSFGKFSV
Ga0187848_102104221	3300017935	Peatland	MRASVGGRNELAARVQQALALLTKKEAEYIVNVVVGCIEATLLNNLGTDG
Ga0187850_102873692	3300017941	Peatland	MRESLRMGRDELAGRVQQALNLPTKKEAQHIVNTVISCIEHTLLNNLGTNGFTMKL
Ga0187819_108275961	3300017943	Freshwater Sediment	MRASVGGRDELTARVQLALMLPTKKQAAQIVDVVVDSLEATLLNNL
Ga0187847_104364682	3300017948	Peatland	MRASLRGREELAVRVQQALALPTKKGAEQVVDAVIGSLEATLLN
Ga0187817_100671983	3300017955	Freshwater Sediment	MRASAGGRNELAARVQLALMLPTKKQAEQVVDVVIAS
Ga0187781_110110401	3300017972	Tropical Peatland	MRSSVGGRNELTLRVQQALSLLTKKEAEHIVNVVVSCLEATLLNNLASD
Ga0187782_115613521	3300017975	Tropical Peatland	MRASVGGRDELALRVQHALMLPTKKQAGQIVNVVVDSLEATLLNNLAVDGFTLKLGSF
Ga0181520_102499401	3300017988	Bog	MRASVRGRDELAVRVQQALALLTKKEAEHIVNVIVSCVEATLLNNL
Ga0187816_105631301	3300017995	Freshwater Sediment	MRASVGGRDELATRVQQALLLPTKKQAERIVDVVIGSLESTLLNNLGTNGFTLKLG
Ga0187815_100763883	3300018001	Freshwater Sediment	MQRSVRGREELSSRVQQALALPTKKQAEIVVDAVVAALEATLLTNLGTD
Ga0187861_101728721	3300018020	Peatland	MRESLRMGRDELAGRVQQALNLPTKKEAEHIVNTVISCIEHTLLNNLGTNGFTMKLNSF
Ga0187889_104896282	3300018023	Peatland	MRASVGGRNELAARVQQALALLTKKEAEHIVNVVVSCVEATLL
Ga0187881_104826381	3300018024	Peatland	MRASVGGRNELAARVQQALALLTKKEAEHIVNVVVSCVE
Ga0187867_106262992	3300018033	Peatland	MRASVGGRDELATRVQQALMLPTKKQAEQIVDVMIGSLEATLLNNLGTDEFTLKL
Ga0187883_101014871	3300018037	Peatland	MRASVGGRNELAARVQRALALLTKKEAEHIVNVVVGCIEATLLNNLGTDEFTLKLNSFGKFS
Ga0187862_103198931	3300018040	Peatland	MRASLRGRDELTARVQQALALITKKEAEYIVDAVIGSLEATLLNNLATNG
Ga0187871_100988122	3300018042	Peatland	MRASLRGREELAVRVQQALALPTKKEAEQVVDAVIGSLEATLLN
Ga0187859_108601182	3300018047	Peatland	MSASVGGREQLVVRVQQALALPTKKEAEMVVDTVVAALE
Ga0187858_107503002	3300018057	Peatland	MRASVRGRDELAMRVQQALLLATKKQAEQIVDVVIDSLEATLLNNLST
Ga0187784_106588832	3300018062	Tropical Peatland	MRASVGGRDELALRVQQALDVPTKKQAQMIVAAVVSALE
Ga0187772_106000402	3300018085	Tropical Peatland	LAVRVQQALMLPTKKHAQQIVDVVIGSLEETLLNNLGTDGFTLKLN
Ga0187772_111020692	3300018085	Tropical Peatland	MRASVGGRDELVMRVQQGLRLLTKKEAEHVVNAVVRALEATLLNNLGA
Ga0187771_1000084020	3300018088	Tropical Peatland	MRASVGGRDELAARVQQMLMVPTKREAEHIIEAVIYSLESTLLNNLGT
Ga0187771_112046752	3300018088	Tropical Peatland	MRASVGGRAELAIRVQRALMLPTKKQAEQVLDVVVSSLEATLLNNLGADGFTLKLGSFGKFSVRHK
Ga0187770_102066531	3300018090	Tropical Peatland	MRASVGGRDELAVRVQQALMLPTKKQAEQIVDAVVNSVEA
Ga0187770_106759052	3300018090	Tropical Peatland	MRASVGGRDELAARVQQALALPTKKEAEHVVDVVIGSLEATLLNNLGTDGFTLKL
Ga0187770_113100902	3300018090	Tropical Peatland	MRASVGGRNELALRVQQALALPTKKEAEHIVNVVVSCLEATLLNNLASDGFTLKLNSFGKFSV
Ga0187770_114281341	3300018090	Tropical Peatland	MRASLRGREELVLNVQTALSLPTKKDAEHVVSTVIQSLETTLLNNLATDGFTLKLN
Ga0193751_11802072	3300019888	Soil	MPASLKGREHLIARVQRALAVATKKEAEHVVNAVICSLESTLLNNL
Ga0210403_107046282	3300020580	Soil	MRASLKGRDELAVRVQIALSLPTKKEAEHVVNAVITSLETTLLNHL
Ga0210395_103818211	3300020582	Soil	MRASVGGREELTARVQQALMLPTKKQAGQIVDVVVESLEATLLNNLATDGFTL
Ga0210395_105942601	3300020582	Soil	MRASPRGRDELAVRVQQALALPTKKEAEHIVNTVIESLEATLL
Ga0210405_104477052	3300021171	Soil	MRASIRGRDELTARVQQALALPTKKEAEMVVETVVAALEATLLDNLCTDGFTLKLGGF
Ga0210385_103408144	3300021402	Soil	MRASLKGREELVTRVQQALLLPTKKEAEHVVNTLVSSLEWTLLNNLGTNGFTMKLGSFGK
Ga0210387_100641626	3300021405	Soil	MRASVRKGRDELAGRVQAALCLSTKREAEHVVNAVVSCLECTLLNHLATD
Ga0210383_109931531	3300021407	Soil	MRASLKGRDELAVTVQTALSLATKKEAEQVVDAVITS
Ga0210390_111586242	3300021474	Soil	MRASLRGREELVTRVQQMLALSTKKEAEHVVNVVICGLEATLL
Ga0137417_10471471	3300024330	Vadose Zone Soil	MRASIEGRVELTERVQRSLALPTKKEAEHVVNAVIGSLETTLLNNLGTDGFTLKLNGFGKASSP
Ga0207693_105318481	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LNYMRASVSGRQELAARVQQSLALPTKKEAQIVLDGMVAALEATLLNNLGSNGFTLK
Ga0257172_10472202	3300026482	Soil	MRASLKGRDELAVRVQIALSLPTKKEAEHVVNAVITSLETTLLNHLGTDGFT
Ga0257168_10772332	3300026514	Soil	MRASLKGRDELAVRVQIALSLPTKKEAEHVVNAVITSLETTLLNHLGTDGFTLKLKSFGKFAIRHRPGIRRKI
Ga0209378_12953961	3300026528	Soil	MRASLRGREELAVRVQQALALPTKKQAEMVVEAVIECLEATLLNNLGTNGFMLKLG
Ga0209076_10905011	3300027643	Vadose Zone Soil	MRASLKGRDELAVRVRTSLSLPTKKEAEHVVNAVITSLETTLLNHLGTDGF
Ga0209038_100903111	3300027737	Bog Forest Soil	MRASLRGREELAARVQQALALPTKKEAEMIVETVVAALEATLLNNLGTDEF
Ga0209448_102683301	3300027783	Bog Forest Soil	MRSSLRGREELSARVQQALALPTKKEAEMVVETVVAALEATLLNNLGTDGFTLKLNGFG
Ga0209167_104424582	3300027867	Surface Soil	MRASLRGREELAARVRQALALPTKKEAERVVDVVIESLEATLLNNLGEDRFTLKLSSF
Ga0209488_106894011	3300027903	Vadose Zone Soil	MRASLKGRDELAVRVQTSLSLPTKKEAEHVVNAVITSFETTLLNHLGTDGFTLKLNGFGKFYV
Ga0209415_104406273	3300027905	Peatlands Soil	LAVTVQRALALATKKQAAHVIDAVIESLEITLLNHLGTDGFTLKLASFGK
Ga0209698_100184061	3300027911	Watersheds	MRASIRGREELAVRVQAALSLPTKKEAEHVVNVLIQSLETTL
Ga0209698_102367823	3300027911	Watersheds	MGASVGGRDELAARVQQALMLPTKKQAEQIVDAVIGSLEATLLN
Ga0209168_106041831	3300027986	Surface Soil	MRASLRGREELAGRVQRGLALATKKEAEHVVNTVITSLETTLLNNLGTDGFTLKLGSFGKFHVRHK
Ga0209526_107592631	3300028047	Forest Soil	MPASIKGREDLITGVQRALAVATKKEAEHVVNTVVSCLECTLLNNLGTNGFTMK
Ga0311352_110408971	3300029944	Palsa	MGRDELAERVQQALNLPTKKEAEHIVNTVISCIEHTLLNNLGT
Ga0316363_102132081	3300030659	Peatlands Soil	MRESLRMGRDELAGRVQQALNLPTKKEAEHIVNTVISCIEQTLLN
Ga0302324_1025404542	3300031236	Palsa	MKGEVDLTNMRASLKGREELAARVQRALALPTKKEAEMIVDTVVAALEASLLNNLGINGFTLRLGGFG
Ga0302326_119263751	3300031525	Palsa	MRESLRMGRDELAGRVQQALNLPTKKEAEHIVNTVISCIEHTLLNNLGTNGFTMK
Ga0310686_1153953906	3300031708	Soil	LAEKVQTALYLPTKREAERVIDAVVASLEITLLNNLGTDGFTLK
Ga0307475_107975552	3300031754	Hardwood Forest Soil	MRASIRGRDELTARVQTALSLPTKKEAEHVVNTVIASLETTLLNNLGTDGFTLKLNGFGK
Ga0307478_100092545	3300031823	Hardwood Forest Soil	MRASLRGREELAVRVQQALALATKNEAERVVETVVGALEALC
Ga0307478_103366192	3300031823	Hardwood Forest Soil	MRASIRGRDELAEKVQAALSLATKKEAEQVVRAVIMSLETT
Ga0310916_112566201	3300031942	Soil	MRASVNGQQELAMRVQQALALATKKEAQMVVDAVVTGLESTLLNNLESDGFTLKLGSFGK
Ga0307479_106089592	3300031962	Hardwood Forest Soil	MRASVGGRDELAARVQRALMLPTKKQAAQIADVVIASLESTLLNNLGTN
Ga0311301_120015681	3300032160	Peatlands Soil	MRESLRTGRDELVVRVQQAMELLTKKEAEMIVNTVVSCIEHTLV
Ga0335085_100595216	3300032770	Soil	MRASIGGRNELAERVQQAFGLPTKKQAEMITDTVVAALEATL
Ga0335085_103611571	3300032770	Soil	MRASLGGRSELASRVQLALMLPTKKQAEQIVDVVIGSLEQTLLNNLAVDGFTLNW
Ga0335082_100170488	3300032782	Soil	MRASIGGRNDLAERVQQAFGLPTKKQAEMITDTVVAALEATL
Ga0335070_112897502	3300032829	Soil	MRASLRGREELITRVQQALCLDTKKEAEHVIDTVIGSLEATLLNNLDINEFALK
Ga0335081_107741122	3300032892	Soil	MRASIRGRDELTVRVQQALALPTKKEAEMVVDTVVTALEATLLNNLGTNGFTLKLGSFGK
Ga0335083_100368032	3300032954	Soil	VRTNPEGRDELFVRVQRALSLGTKKEAEHIVSVVIGSLEATLLKHLDPDGFT
Ga0335077_116097421	3300033158	Soil	MRASVGGRDELVLRVQQALDVPTKKQAEMIVDAVVRALEETLHNNLGVNGFTLKLGSFGK
Ga0371490_11378772	3300033561	Peat Soil	MRASPTGRDELAVRVQQALALPTKKEAEHIVSTVIESLEATLLDNLGTN
Ga0314867_057841_733_903	3300033808	Peatland	MRASVRGRDELAARVQLALALPTKKEAAMIVNAVVSALEATLLNNLGSDGFYLKLGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089713

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences