Metagenome / Metatranscriptome Family F089679

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089679
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	72 residues
Representative Sequence	MVITELDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGAPFALIAPGPRWRPRHTPEMPDVAPPAA
Number of Associated Samples	49
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.06 %
% of genes near scaffold ends (potentially truncated)	49.07 %
% of genes from short scaffolds (< 2000 bps)	87.96 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.852 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (34.259 % of family members)
Environment Ontology (ENVO)	Unclassified (59.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.65% β-sheet: 0.00% Coil/Unstructured: 67.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00248	Aldo_ket_red	3.70
PF04392	ABC_sub_bind	2.78
PF14659	Phage_int_SAM_3	1.85
PF13676	TIR_2	1.85
PF12307	DUF3631	1.85
PF00589	Phage_integrase	1.85
PF03401	TctC	0.93
PF08238	Sel1	0.93
PF05119	Terminase_4	0.93
PF01068	DNA_ligase_A_M	0.93
PF07687	M20_dimer	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.78
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
All Organisms	root	All Organisms	23.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
cellular organisms	root	All Organisms → cellular organisms	23.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.41 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium sp. 6(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	1.85 %
Bradyrhizobium sp. CCGUVB4N	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB4N	0.93 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0259690	Not Available	530	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10100470	Not Available	610	Open in IMG/M
3300005332\|Ga0066388_100480200	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300005332\|Ga0066388_102141535	Not Available	1007	Open in IMG/M
3300005332\|Ga0066388_105436020	Not Available	646	Open in IMG/M
3300005363\|Ga0008090_10005533	Not Available	659	Open in IMG/M
3300005363\|Ga0008090_10029459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1547	Open in IMG/M
3300005363\|Ga0008090_10159759	Not Available	1721	Open in IMG/M
3300005363\|Ga0008090_10260812	Not Available	1621	Open in IMG/M
3300005363\|Ga0008090_15219590	Not Available	579	Open in IMG/M
3300005363\|Ga0008090_15374794	Not Available	598	Open in IMG/M
3300005363\|Ga0008090_15546543	Not Available	594	Open in IMG/M
3300005363\|Ga0008090_15860833	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_100253492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB4N	2719	Open in IMG/M
3300005764\|Ga0066903_100855420	Not Available	1637	Open in IMG/M
3300005764\|Ga0066903_101537857	Not Available	1258	Open in IMG/M
3300005764\|Ga0066903_101737766	Not Available	1189	Open in IMG/M
3300005764\|Ga0066903_102096015	Not Available	1088	Open in IMG/M
3300005764\|Ga0066903_102965807	Not Available	920	Open in IMG/M
3300005764\|Ga0066903_103158025	Not Available	891	Open in IMG/M
3300005764\|Ga0066903_103267653	Not Available	876	Open in IMG/M
3300005764\|Ga0066903_103948878	Not Available	796	Open in IMG/M
3300005764\|Ga0066903_103986990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300005764\|Ga0066903_104049961	Not Available	785	Open in IMG/M
3300005764\|Ga0066903_104743300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	723	Open in IMG/M
3300005764\|Ga0066903_105232489	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_107698597	Not Available	554	Open in IMG/M
3300009792\|Ga0126374_10929034	Not Available	677	Open in IMG/M
3300010043\|Ga0126380_10169598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1424	Open in IMG/M
3300010046\|Ga0126384_10872328	Not Available	811	Open in IMG/M
3300010046\|Ga0126384_11877288	Not Available	570	Open in IMG/M
3300010048\|Ga0126373_10975811	Not Available	912	Open in IMG/M
3300010048\|Ga0126373_11411161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	762	Open in IMG/M
3300010358\|Ga0126370_11497639	Not Available	641	Open in IMG/M
3300010358\|Ga0126370_12299861	Not Available	533	Open in IMG/M
3300010359\|Ga0126376_11030892	Not Available	825	Open in IMG/M
3300010361\|Ga0126378_10548943	Not Available	1270	Open in IMG/M
3300010361\|Ga0126378_10720841	Not Available	1109	Open in IMG/M
3300010361\|Ga0126378_12704876	Not Available	567	Open in IMG/M
3300010361\|Ga0126378_12969716	Not Available	541	Open in IMG/M
3300010366\|Ga0126379_10107803	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300010366\|Ga0126379_10561573	Not Available	1222	Open in IMG/M
3300010366\|Ga0126379_10717908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300010366\|Ga0126379_10858773	Not Available	1009	Open in IMG/M
3300010366\|Ga0126379_11282742	Not Available	839	Open in IMG/M
3300010366\|Ga0126379_12618553	Not Available	602	Open in IMG/M
3300010376\|Ga0126381_100771442	Not Available	1379	Open in IMG/M
3300010376\|Ga0126381_102272988	Not Available	779	Open in IMG/M
3300010376\|Ga0126381_102366717	Not Available	762	Open in IMG/M
3300010376\|Ga0126381_103698523	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_103928545	Not Available	579	Open in IMG/M
3300010398\|Ga0126383_11269764	Not Available	826	Open in IMG/M
3300010398\|Ga0126383_11388864	Not Available	792	Open in IMG/M
3300010398\|Ga0126383_11390601	Not Available	792	Open in IMG/M
3300010398\|Ga0126383_12572812	Not Available	593	Open in IMG/M
3300010398\|Ga0126383_12764924	Not Available	573	Open in IMG/M
3300010398\|Ga0126383_13398046	Not Available	520	Open in IMG/M
3300012971\|Ga0126369_11454750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300012971\|Ga0126369_11571774	Not Available	747	Open in IMG/M
3300012971\|Ga0126369_12454767	Not Available	607	Open in IMG/M
3300012971\|Ga0126369_12561632	Not Available	595	Open in IMG/M
3300012971\|Ga0126369_13567951	Not Available	510	Open in IMG/M
3300016270\|Ga0182036_11290158	Not Available	609	Open in IMG/M
3300016319\|Ga0182033_10560750	Not Available	988	Open in IMG/M
3300016319\|Ga0182033_11193506	Not Available	681	Open in IMG/M
3300016341\|Ga0182035_10866983	Not Available	795	Open in IMG/M
3300016341\|Ga0182035_11000691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	741	Open in IMG/M
3300016371\|Ga0182034_11231531	Not Available	651	Open in IMG/M
3300016371\|Ga0182034_11483948	Not Available	594	Open in IMG/M
3300016422\|Ga0182039_11199455	Not Available	686	Open in IMG/M
3300016422\|Ga0182039_11433212	Not Available	628	Open in IMG/M
3300016445\|Ga0182038_10541333	Not Available	998	Open in IMG/M
3300021560\|Ga0126371_12840056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	587	Open in IMG/M
3300021560\|Ga0126371_13738167	Not Available	513	Open in IMG/M
3300027874\|Ga0209465_10123925	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031543\|Ga0318516_10353835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300031545\|Ga0318541_10001611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8457	Open in IMG/M
3300031545\|Ga0318541_10690353	Not Available	570	Open in IMG/M
3300031561\|Ga0318528_10100299	Not Available	1519	Open in IMG/M
3300031681\|Ga0318572_10743189	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031719\|Ga0306917_10912571	Not Available	687	Open in IMG/M
3300031736\|Ga0318501_10596362	Not Available	606	Open in IMG/M
3300031744\|Ga0306918_10051615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2733	Open in IMG/M
3300031744\|Ga0306918_10069413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2412	Open in IMG/M
3300031744\|Ga0306918_11031517	Not Available	638	Open in IMG/M
3300031744\|Ga0306918_11215174	Not Available	581	Open in IMG/M
3300031777\|Ga0318543_10183346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300031833\|Ga0310917_10406820	Not Available	925	Open in IMG/M
3300031879\|Ga0306919_10170957	Not Available	1599	Open in IMG/M
3300031890\|Ga0306925_10772283	Not Available	1000	Open in IMG/M
3300031893\|Ga0318536_10006368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4814	Open in IMG/M
3300031893\|Ga0318536_10262622	Not Available	877	Open in IMG/M
3300031896\|Ga0318551_10273814	Not Available	946	Open in IMG/M
3300031897\|Ga0318520_10243942	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032001\|Ga0306922_10361399	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300032001\|Ga0306922_10849357	Not Available	951	Open in IMG/M
3300032064\|Ga0318510_10024762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	1951	Open in IMG/M
3300032065\|Ga0318513_10032908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2250	Open in IMG/M
3300032068\|Ga0318553_10141822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300032076\|Ga0306924_12203459	Not Available	562	Open in IMG/M
3300032261\|Ga0306920_104240411	Not Available	516	Open in IMG/M
3300033289\|Ga0310914_11049958	Not Available	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.07%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.07%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.41%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	7.41%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	34.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_02596901	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VMVITEFDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGAPFALIAPGPYWRPWRTSEGDAVLLAA*
AF_2010_repII_A001DRAFT_101004701	3300000793	Forest Soil	MSGQSDEEERRQRVMVITEFDAGDPEATLHALADEILKYRRAVRLPDAGVPFALIAPGSRWRPKRSIDD
Ga0066388_1004802004	3300005332	Tropical Forest Soil	MVVTEFDAGDPEATLHALADEILKYRRAVGLLAEAIGWADAGAPFPLIAPGPHWRPRHTPEMPDAPPPAA*
Ga0066388_1021415353	3300005332	Tropical Forest Soil	RDEEERRQRVMIIAEFDAGDPEATMHAMATEILKYRRAVRLLAKAVGWADVGASFALIAPGPYWRPRHTPEMPGVAPPAV*
Ga0066388_1054360201	3300005332	Tropical Forest Soil	MEEERRRQRVMVITEFDAGDPEATLHALADEILKYRRALRLLARAIGWASVGAPFGLFPPGPLWPPRRTIKGADAAPPAA*
Ga0008090_100055332	3300005363	Tropical Rainforest Soil	MVITELDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGAPFALIAPGPRWRPRHTPEMPDVAPPAA*
Ga0008090_100294592	3300005363	Tropical Rainforest Soil	MIITEFDAGDPDATMHALADEILKYRRALRLLAAAIGWADAGAPFALIAPGPYWRPRRTPEMPDIAPPAA*
Ga0008090_101597595	3300005363	Tropical Rainforest Soil	GDSEATMHALADEILKYRRTLRLLARAIGWADAGAPFGLIGPGPLWRRRRTIDGVLAIKEWVRAK*
Ga0008090_102608122	3300005363	Tropical Rainforest Soil	MRRQRVMVITESDAGDPEATMHALADGILKYRRAVGLLAKAISWAGVGAPFALIAPGPHWRPRRPPETPDVLPPAA*
Ga0008090_152195901	3300005363	Tropical Rainforest Soil	RRQYEEEERRQRVMVVTEFDAGDPEATMHAMATEILKYRLALRQLVRAIGLADAGAPFGVLGPGPLWRPRRTIDGTPEVPDVAPPAA*
Ga0008090_153747941	3300005363	Tropical Rainforest Soil	RVMVITEFDAGDPEATMHAMADEVLKYRRAVGLLAKAIGWADAGAPFGVVGPGPLWRLRCTPEMPDVESPAA*
Ga0008090_155465431	3300005363	Tropical Rainforest Soil	MVITEFDAGDPEATMHAMADEILKYRRALRLLAKAIGWADAGAPFALIAPGRYWRPRRTPEMPDVPPPA*
Ga0008090_158608331	3300005363	Tropical Rainforest Soil	MVITEFDAGDSEATMHALADEILKYRRALRVLATAIGWAEAGAPFGLFPPGPLWRPRRTIEDTDVAPPAARAAWPAA
Ga0066903_1002534923	3300005764	Tropical Forest Soil	MVITEFDAGDHEATLHAMAAEILKHRQPLRLLAKAVGWADVGAPFGLIAPGPYWRPRRTPEVPDVAPPAA*
Ga0066903_1008554202	3300005764	Tropical Forest Soil	MHRALFRARFFFDPEATLHALADEILKYRRALRLLARAIGWAEAGAPFGLLGPGPLWRSRRTIEDADAVPPAA*
Ga0066903_1015378573	3300005764	Tropical Forest Soil	MHRALFRARFFFDPEATLHALADEILKYRQAVRLLTRAIGWADAGAPFGVVGPGPLWRPRRTPEMPNVVPPAA*
Ga0066903_1017377663	3300005764	Tropical Forest Soil	MFSIIGLTTLEVTPRVMVITEFNAGDPEATLHALADEILKYRRALRLLATAIGWADAGAPFGVLGPGPLWRPRRISESDEVPPAA*
Ga0066903_1020960152	3300005764	Tropical Forest Soil	MVITELDAGDPEATMHALADEILKYRRALRLLATAIGWADAGALFALIVPGRHWRPRRTSESDVVPPAA*
Ga0066903_1029658072	3300005764	Tropical Forest Soil	VMVITEFDAGDPEATMHALANEILRYREALRLLAAAIGWADAGAQFGLIGPGPLWRPRRAIEGADAAPPAV*
Ga0066903_1031580253	3300005764	Tropical Forest Soil	VMVITELDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGAPFALIAPGPRWRPRHTPEMPDVAPPAA*
Ga0066903_1032676532	3300005764	Tropical Forest Soil	VMVITEFDAGDPEATMHALADEILKYRRAVRLLAKAIGWADAGAPFALIAPGPYWRSERTPGMPDVLPPAA*
Ga0066903_1039488782	3300005764	Tropical Forest Soil	VMWPSRLEQPDVTVITEFDAGDPEATLHALADEILKYRRALRLLADAVGWADVGAPPGPYWRPRHTIEDADVAP
Ga0066903_1039869901	3300005764	Tropical Forest Soil	RQRVMVITEFDAGDPEATMHAMATEILEYRRAVRMLARAIGLADAGAPFGVLGPGPLWRPRRTPEMPDVPPPAA*
Ga0066903_1040499612	3300005764	Tropical Forest Soil	MVITEFDAGDPEATMHALASEILEYRRALRLLAKAIGWASTGAPFAIIPPGPYWRPRRTPEMADVGPPAA*
Ga0066903_1047433001	3300005764	Tropical Forest Soil	MSGQSDEEERPQRVMVITEFDAGDPEATLHALADEILKYRRAVRLLAKAIGWTDAGVPFALIAPGSRWRPKRSIDDTPEVPDV
Ga0066903_1052324891	3300005764	Tropical Forest Soil	MVITEFDAGNPEATMHALAAEILEYRRALRLLAKAVGWASTGRPFGLFPPGSLWRPRRTIVDDGTPEMPDAAPPWRAAACRAGEGRD*
Ga0066903_1076985972	3300005764	Tropical Forest Soil	VAVIAEFDVGDPEATLHALADEILRYRRALRLLAQASAGRMPGGGPFALVGPGPLWRPRRTIDGTPE
Ga0126374_109290342	3300009792	Tropical Forest Soil	MVITEFDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGAPFGMLGPGPLWRSRRMPEIPDILPPAA*
Ga0126380_101695982	3300010043	Tropical Forest Soil	MVITEFTAGDPDATMHALADEILKYRRAVGLLAEAIGWADAGAPFPLIAPGPHWRPRHTPEMPDAPPPAA*
Ga0126384_108723281	3300010046	Tropical Forest Soil	SLGRGFFDPEATLHALADEILKYRLALRLLATAIGWASAGTPFGVFPPGPLWRPRRTINGAPEMPDVAPPAA*
Ga0126384_118772881	3300010046	Tropical Forest Soil	VTVITDFDAGDPEATLHAMADEILKYRRAVRLLAKAIGWADAGAPFAIIPPGRYWRPRRTPEMPDVAPPAA*
Ga0126373_109758111	3300010048	Tropical Forest Soil	MHRALFRARFFFDPEATLHALADEILKYRRALRLLARAIGWAETGAPFGLLGPGPLWRSRRTIEDADAVPPAA*
Ga0126373_114111611	3300010048	Tropical Forest Soil	MSGQSDEEERRQRVMVITEFDAGDPEATLHAFADEILKYRRAVRLPDAGVPFALIAPGSRWRPKRSIDDTPEVPD
Ga0126370_114976392	3300010358	Tropical Forest Soil	MHRALFRARFFFDPEATLHALADEILKYRRALRLLARAIGWAEAGAPFGLLGPGPLWRSRRTIEDADAVPPAA
Ga0126370_122998612	3300010358	Tropical Forest Soil	MVITEFDARDPEATLHALADEILKYRRAVGLLAKAIGWASAGAPLALMAPGPRTRRTPEVPDVPPPA*
Ga0126376_110308921	3300010359	Tropical Forest Soil	GDPDATMHALADEILKYRRALQLLAKAIGWADAGAPFSLIAPGRYWRPRRTIDGTGVAPLAA*
Ga0126378_105489432	3300010361	Tropical Forest Soil	MVITEFDARDPEATLHALADEILKYRRAVGLLAKAIGWADAGAPFALIAPGRYWRPGHTPEMSDVLPPAA*
Ga0126378_107208412	3300010361	Tropical Forest Soil	MVVTELDAGDSEATMHALANQILEYRRALRLLAQAIGWAGAGAPFALIAPGPRWRPRHTSEMPGVAPPAT*
Ga0126378_127048761	3300010361	Tropical Forest Soil	MHRALFRARFFLIPEATLHALADEILQYRRALRLLATAVGWVSTSAPFGLIAPGPLWCPRRTSEGDGVPPAA*
Ga0126378_129697161	3300010361	Tropical Forest Soil	ATLHALADEILKYRRAVGLLAEAIGWADAGAPFPLIAPGPHWRPRHTPEMPDAPPPAA*
Ga0126379_101078031	3300010366	Tropical Forest Soil	ITEFDAGDPEATIHAMATGILEYRRTLRLLAKAIGWADAGAPFALISPGPYWRPRRSIDGNVAPPAA*
Ga0126379_105615732	3300010366	Tropical Forest Soil	MVITEFDAGDHEATMHALADEILKYRRAVRLLAEAIGLADAGAPFGVLGPGPLWRPRRTPEMPDTPPSAA*
Ga0126379_107179082	3300010366	Tropical Forest Soil	MVITEFDAGDPEATLHALADEILKYRRAVRLLAKAIGWADTGAPFALIAPGRYWRPRRTIDGAPQTFDDEPE
Ga0126379_108587731	3300010366	Tropical Forest Soil	MVITEFDAGDPDATLHALADEILKYRLALRQLARAIGLADAGAPFGVLDPGPLWHPRRTFDDTPEMPDVAPPASIPPGN*
Ga0126379_112827421	3300010366	Tropical Forest Soil	DPEATLHALADEILKYRRALRLLAKAIGWADAGAPFAIIPPGPHWRPRRTPEMPDVAPRRQPYG*
Ga0126379_126185532	3300010366	Tropical Forest Soil	MSGQSDEEERRQRVMVITEFDAGDPEATLHALADEILKYRRAVRLPDAGVPFALIAPGSRWRPKRSIDDTPEVPD
Ga0126381_1007714422	3300010376	Tropical Forest Soil	EFDAGDPEATLHAMATEILEYRRALRMVAKAIGWADAGAPFGLLGPGPRWCPRRTPEVPDVVPPAV*
Ga0126381_1022729882	3300010376	Tropical Forest Soil	MVITEFGDPEATLHALAGEILRYRLALRLLATAIGWASTGAPFAIIPPGPYWRPRRTPEMADVGPPAA*
Ga0126381_1023667171	3300010376	Tropical Forest Soil	MVITEFDAGDPDATLHALADEILKYRLALRQLARAIGLADAGAPFGLIGPGPGWRPRRASDGTLDAAPRQQGASC*
Ga0126381_1036985231	3300010376	Tropical Forest Soil	RQRVTVITEFDAGDPKATMHALADEILKYRRALRLLATAVGWVSTSAPFGLIAPGPLWCPRRTSEGDGVPPAA*
Ga0126381_1039285452	3300010376	Tropical Forest Soil	VIVITEFDAGDPEATLHALADEILKYRRAVRLLAEAIGWAKAGAPFGFFPPGPLWRPRQANKSDVASPAA*
Ga0126383_112697641	3300010398	Tropical Forest Soil	QRVAVIAEFGAGDPEATMHALADEILKYRQAVRLLAKAIGWADAGAPFGFFPPGPLWRPRQTSKDDVVPPAA*
Ga0126383_113888643	3300010398	Tropical Forest Soil	TEFDAGDPEATLHALAGEILKYRLALRQLVRAIGLADAGAPFGVLGPGPRWRSRRTPEVPDVPSPAA*
Ga0126383_113906011	3300010398	Tropical Forest Soil	AGDPEATMHALADEILKYRLAVRLLAKAIGLADAGAPFGVLGPGTHWRPRRTPEVPDVVPPAA*
Ga0126383_125728123	3300010398	Tropical Forest Soil	MVITEFDAGNPAATMHALADEILKYRRALRLLATAIGWAGAGAPFGLIAPGPLWRPRRTIDGTDAAPPAA*
Ga0126383_127649241	3300010398	Tropical Forest Soil	TELDAGDPEATLHALADENLKYRRAVRLLAKAIGWADAGAPFGVLGPGPLWRPRRIIEDADAAPPAA*
Ga0126383_133980462	3300010398	Tropical Forest Soil	MVITEFDAGDPEATLHALADEILKYRRAVRLLAKAIGWADAGPPFALIAPGRYWRPRRTLDGAPEMSDVTSPVA*
Ga0126369_114547501	3300012971	Tropical Forest Soil	MVITEFDAGDPEATLHALADEILKYRQAVRLLAKAIGWADAGAPFGLIAPGPYWHPRYTPEMPDAAPPA
Ga0126369_115717741	3300012971	Tropical Forest Soil	MSGQSDEKERRQRVMVITEFDAGDPEATLHALADEILKYRRAVRLPDAGVPFALIAPGSRWRPKRSIDDTPEVPDVPPP
Ga0126369_124547672	3300012971	Tropical Forest Soil	MVIAEFDAGDPEATLHALADEILKYRRAGRLLAKAIGWVDTGAPFSLIAPDPRWRPRRTPEMLDGAPPAA*
Ga0126369_125616321	3300012971	Tropical Forest Soil	MFIGGSDGQEANAGDPEATLHALAGEILRYRLALRLLATAIGWASTGAPFGLFPPGPLWRPRPASKGDEAPPAA*
Ga0126369_135679512	3300012971	Tropical Forest Soil	MVITEFDAGDHEATLHAMAAEILKHRQSLRLLAKAVGWADVGAPFGLIAPGPYWRPRRTPEVPDVAPPAA*
Ga0182036_112901581	3300016270	Soil	VMVVTEFDAGAPDATMHALADEILKYRRAVRLLAKAVGLADAGAPFALIAPGPLWRPRRTIDGADGTPPAA
Ga0182033_105607503	3300016319	Soil	DEEDRRQRVMVITEFDAGDPDATMHALADEILKYRRVVRLLAKAIGWADAGAPFSLIAPGRYWRPRRAIDGTDVAPPAA
Ga0182033_111935061	3300016319	Soil	MVITEFDAGDPEATMHAMATEILKYRRAMRLLATAIGWAEVGAPFGLIGPGPHWRPRRTPETPDDKPSAA
Ga0182035_108669831	3300016341	Soil	AGACSTPSLMVITEFDAGEPDATMHAMAGEILRYRQALRLLATAIGWASAGAPFGLFPPGPFGRPRRTINGTPEMPDAPPPAV
Ga0182035_108959482	3300016341	Soil	FDAGDPEATLHALAAEILEYRRAMRLLVEAVGWADIGAPFSLISPGPYWHPRRTPETLDVAPPAA
Ga0182035_110006911	3300016341	Soil	MSGQSDEEERRQRVMVITEFDAGDPEATLHALADEILKYRWAVRLLAKAIGWTDAGVPFALIAPGSRWRPRRSIDDTPEVP
Ga0182034_112315311	3300016371	Soil	VMVITEFDAGDPEATMHAMADEILKYGRAVRLLAKAIGWTDAGAPFALISPGPYWRPRRTIEG
Ga0182034_114839482	3300016371	Soil	MSGDEEERRQRVMVITEFDAGDPEATLHALADEILKYRWAVRLLAKAIGWTDAGVPFALIAPGSRWRPRRSIDDTPEVP
Ga0182039_111994551	3300016422	Soil	MVITEFDAGEPDATMHAMAGEILRYRQALRLLATAIGWASAGAPFGLSPPGPFGRAIRTINGTPEMPDAPPPAV
Ga0182039_114332121	3300016422	Soil	DPEATMHAMATEILKYRRAMRLLATAIGWAEVGAPFGLIGPGPHWRPRRTPETPDDKPSA
Ga0182038_105413332	3300016445	Soil	QRDEEDRRQRVMVITEFDAGDPDATMHALADEILKYRRVVRLLAKAIGWADAGAPFSLIAPGRYWRPRRAIDGTDVAPPAA
Ga0126371_128400562	3300021560	Tropical Forest Soil	MVIAEFDAGDPEATLHALADEILKYRRAMRLLAKAIGWADAGAPCALVAPGPHRHPRRTIDGARWR
Ga0126371_137381672	3300021560	Tropical Forest Soil	MVITEFDAGDPEATLHALADEILKYRRAVGLLAKAIGWAGAGAPFALIAPGPHWRPKHAIDGTPEMPDVGTG
Ga0209465_101239251	3300027874	Tropical Forest Soil	MRRQRVMVITEFDAGDPEATLHALADEILKYRRALRLLAQAIGWADAGAPFALIAPGPYSRPRRTPEMPDVAPPAA
Ga0318516_103538351	3300031543	Soil	MVITEFDAGDPEATLHALADEILRYRRALRLLATAIGWASTGAPFGIFPPGPLWHPRRTIDGAPDGQP
Ga0318541_100016114	3300031545	Soil	MVITEFDAGDPEATMHALADEILRYRRALRLLATAIGWASTGAPFGLFPPGPFRRPRHTSKGDVVPPVA
Ga0318541_106903531	3300031545	Soil	QRVMVIAEFDAGDPEATLHALADEILKYRRSVRLLAEAIGWADAGAPFTLIAPGPRWRPTRTVDGTPEKPDVGPPAA
Ga0318528_101002992	3300031561	Soil	VRVIAEFDAGDSEATLHALADEILNYRRAMRLLVEAIGWADAGAPFSLMGPGPYWHPRRTPDGTLDVAPKRQ
Ga0318574_104172181	3300031680	Soil	EFDAGDPEATLHALAAEILEYRRAMRLLVEAVGWADIGAPFSLISPGPYWHPRRTPETLDVAPPAA
Ga0318572_107431892	3300031681	Soil	QRVTLITEFDAGDPEATMHAMADEILKYRRAVRLLAKAIGWADAGAPFALMPPGPRWRARRTSETAA
Ga0306917_109125712	3300031719	Soil	MRRQRVMVITEFDAGDPEATLHALADEILRYRRALRLLATAIGWASTGAPFGIFPPGPLWHPRRTVDGAPDGQP
Ga0318501_105963621	3300031736	Soil	DRRDRVMVITEFDAGDSEATMHALAGEILKYRQALRWLAKAIGLAEAGAPFGVLGPGPRWRPRRTDIVSPAA
Ga0318501_107618752	3300031736	Soil	TLHAFAAEILEYRRAMRLLVEAVGWAEIGAPFSLISPGPYWHPRRTADGTPDGAPKRQ
Ga0306918_100516153	3300031744	Soil	MVITEFDAGDPDATMHALADEILKYRRVVRLLAKAIGWADAGAPFSLIAPGRYWRPRRAIDGTDVAPPAA
Ga0306918_100694134	3300031744	Soil	QRVMVVTEFDAGAPDATMHALADEILKYRQALRLLATAIGWASTGMPFGLFPPGPFGRPRRTSSKGDVAPPVA
Ga0306918_110315172	3300031744	Soil	MQAGMFIGGSDGQEANAGDPEATLHALAGEILRYRLALRLLATAIGWASTGAPFGLFPPGPLWRPRPASKGDEAPPAA
Ga0306918_112151741	3300031744	Soil	MSGQSDEEERRQRVMVITEFDAGDPEATLHALADEILKYRWAVRLLAKAIGWTDAGVPFALIAPGSRWRPRRSIDDTPE
Ga0318543_101833461	3300031777	Soil	MVITEFDAGDPEATLHALADEILKYRWAVRLLAKAIGWTDAGVPFALIAPGSRWRPRRSIDDTPEVPDVPPAAAWDSEVGGKT
Ga0318557_101838682	3300031795	Soil	MVITEFDAGDPEATLHALADEILKYRWAVRLLAKAIGWTDAGVPFALIAPGSRWRPRRSIDDTPEVPDVPPPAAWDSEVGGRTEVGFG
Ga0310917_104068203	3300031833	Soil	MVITEFDAGDPDATMHALADEILKYRRVVRLLARAIGWADAGAPFSLIAPGRYWRPRRAIDGTDVAPPAA
Ga0306919_101709571	3300031879	Soil	RQRVTLITEFDAGDPEATMHAMADEILKYRRAVRLLAKAIGWADAGAPFALMPPGPRWRARRTSETAA
Ga0306925_107722833	3300031890	Soil	PPHDEEEQRQRVTVITEFDAGDPEATLHALAGEILRYRDVLRLLAEAIGWASAGAPFGLFPPGPLWRPRRPSESDAVPPAA
Ga0318536_100063683	3300031893	Soil	MVITEFDAGDPEATMHALADEILRYRRALRLLATAIGWSSTGAPFGLFPPGPFRRPRHTSKGDVVPPVA
Ga0318536_102626221	3300031893	Soil	VIVITEFDAGDPDARMHALADEILKYRRALRLLAQAIGWASAGTPFGLFPPGPFRRPRRTSKGVVVPPAA
Ga0318551_102738141	3300031896	Soil	FGTEDPEATMHALAKEILRYCQALRLLATAIGWASSGMPFGLFPPGPFRRSRRTIEGTDDAPPAA
Ga0318520_102439423	3300031897	Soil	MRRQRVMVITEFDAGDPEATLHALADEILRYRRALRLLATAIGWASTGAPFGIFPPGPLWHPRRTIDGAPDGQP
Ga0306922_103613992	3300032001	Soil	ERRDRVMVITEFDAGDPEATMHALADEILRYRDVLRLLAEAIGWASAGAPFALIAPGPHWRLRRTPEMPDCRVAVAA
Ga0306922_108493572	3300032001	Soil	ITGFDAGDPEATLHALADEILKYRRAVKLLAKAIGWADAGAPFALIAPGPLWRPRHTPEMPDVPLAAPVRLP
Ga0318545_101942391	3300032042	Soil	VTVITEFDAGDPEATLHALAAEILEYRRAMRLLVEAVGWADIGAPFSLISPGPYWHPR
Ga0318558_103557032	3300032044	Soil	VRVIAEFGAGDSEATLHTLVAEILEYRRAMRLLVEAVSWAEIGAPFSLISPGPYWHPRRTADGTPDGAPKRQ
Ga0318510_100247621	3300032064	Soil	ERRQRVMVVTEFDAGAPNATMHALADEILKYRQALRLLATAIGWASTGMPFGLFPPGPFGRPRRTSSKGDVAPPVA
Ga0318513_100329084	3300032065	Soil	AEFDAGDSEATLHALADEILNYRRAMRLLVEAIGWADAGAPFSLMGPGPYWHPRRTPDGTLDVAPKRQ
Ga0318553_101418222	3300032068	Soil	ITEFGTEDPEATMHALAKEILRYRQALRLLATAIGWASSGMPFGLFPPGPFRRSRRTIEGTDDAPPAA
Ga0306924_122034592	3300032076	Soil	MVITEFDAGDHEATLHAMAAEILKHRQSLRLLAKAVGWADVGAPFGLIAPGPYWRPRRTPEVPDVAPPAA
Ga0306920_1042404112	3300032261	Soil	VMVITEFDAGDPEATMHAMADEILKYGRAVRLLAKAIGWTDAGAPFALISPGPYWRPRRTIEGDVAPPMA
Ga0310914_110499582	3300033289	Soil	TEFDAGEPDATMHAMAGEILRYRQALRLLATAIGWASAGAPFGLFPPGPFGRPRRTINGTPEMPDAPPPAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089679

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences