Metagenome / Metatranscriptome Family F089678

Basic Information
Family ID	F089678
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	40 residues
Representative Sequence	GCTDGHGNLLKTDQRGMPRPDPEDTGGCDMGAYERQSD
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.296 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 6.06% Coil/Unstructured: 93.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00589	Phage_integrase	2.78
PF00196	GerE	1.85
PF01068	DNA_ligase_A_M	1.85
PF01408	GFO_IDH_MocA	0.93
PF05875	Ceramidase	0.93
PF01833	TIG	0.93
PF03092	BT1	0.93
PF00154	RecA	0.93
PF03631	Virul_fac_BrkB	0.93
PF07589	PEP-CTERM	0.93
PF01967	MoaC	0.93
PF13229	Beta_helix	0.93
PF05048	NosD	0.93
PF07638	Sigma70_ECF	0.93
PF01344	Kelch_1	0.93
PF00069	Pkinase	0.93
PF13340	DUF4096	0.93
PF09335	SNARE_assoc	0.93
PF00595	PDZ	0.93
PF14559	TPR_19	0.93
PF02371	Transposase_20	0.93
PF01609	DDE_Tnp_1	0.93
PF13620	CarboxypepD_reg	0.93
PF00486	Trans_reg_C	0.93
PF01402	RHH_1	0.93
PF13545	HTH_Crp_2	0.93
PF03060	NMO	0.93
PF13472	Lipase_GDSL_2	0.93
PF03432	Relaxase	0.93
PF05598	DUF772	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.70
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.85
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3843	Type IV secretory pathway, VirD2 component (relaxase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.93
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.93
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.93
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.93
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.44 %
Unclassified	root	N/A	8.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.63 %
Unclassified	root	N/A	8.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.70 %
Unclassified	root	N/A	8.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.78 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.70 %
Unclassified	root	N/A	8.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.70 %
Unclassified	root	N/A	8.33 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.70 %
Unclassified	root	N/A	8.33 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.70 %
Unclassified	root	N/A	8.33 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005437\|Ga0070710_11216667	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005454\|Ga0066687_10491605	Not Available	724	Open in IMG/M
3300005518\|Ga0070699_101848743	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300005534\|Ga0070735_10366105	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005542\|Ga0070732_10254343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300005564\|Ga0070664_100395526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300005764\|Ga0066903_104340268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300005764\|Ga0066903_106574637	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300006052\|Ga0075029_100550342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300006086\|Ga0075019_10757323	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006162\|Ga0075030_101207482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300009792\|Ga0126374_10999273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300009824\|Ga0116219_10833548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010043\|Ga0126380_10942027	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300010048\|Ga0126373_10966346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	917	Open in IMG/M
3300010048\|Ga0126373_11536013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300010048\|Ga0126373_12137896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300010048\|Ga0126373_12950304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010358\|Ga0126370_10426426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1098	Open in IMG/M
3300010359\|Ga0126376_12872451	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	531	Open in IMG/M
3300010360\|Ga0126372_12807959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010376\|Ga0126381_100586486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1584	Open in IMG/M
3300010376\|Ga0126381_101501076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300010376\|Ga0126381_102523449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300010376\|Ga0126381_103751709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300010376\|Ga0126381_104630167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010376\|Ga0126381_104896018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010398\|Ga0126383_11050360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300010398\|Ga0126383_11379322	Not Available	795	Open in IMG/M
3300010398\|Ga0126383_12177532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	641	Open in IMG/M
3300011081\|Ga0138575_1005110	Not Available	806	Open in IMG/M
3300012096\|Ga0137389_11158042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012207\|Ga0137381_10806822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300012210\|Ga0137378_11232208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012361\|Ga0137360_10922839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300012925\|Ga0137419_11695509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012960\|Ga0164301_11889358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300016270\|Ga0182036_11005435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300016270\|Ga0182036_11647932	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300016294\|Ga0182041_11052741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300016319\|Ga0182033_11808686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300016341\|Ga0182035_10727587	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300016341\|Ga0182035_10977061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300016357\|Ga0182032_10063926	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300016387\|Ga0182040_10098758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300017961\|Ga0187778_10559848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300017966\|Ga0187776_10964776	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300017972\|Ga0187781_10717158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300017974\|Ga0187777_10112002	Not Available	1800	Open in IMG/M
3300017974\|Ga0187777_10343288	Not Available	1025	Open in IMG/M
3300018006\|Ga0187804_10057736	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300018007\|Ga0187805_10258482	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300018088\|Ga0187771_10395305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300018088\|Ga0187771_11154461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300019264\|Ga0187796_1032820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300019890\|Ga0193728_1329234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300020579\|Ga0210407_10625062	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300020580\|Ga0210403_10640430	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300020581\|Ga0210399_10566076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300021088\|Ga0210404_10209323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300021168\|Ga0210406_10171128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1815	Open in IMG/M
3300021401\|Ga0210393_11364105	Not Available	567	Open in IMG/M
3300021403\|Ga0210397_11354180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300021405\|Ga0210387_10374972	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300021405\|Ga0210387_11656953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300021474\|Ga0210390_11322484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021478\|Ga0210402_10069238	All Organisms → cellular organisms → Bacteria → Proteobacteria	3118	Open in IMG/M
3300021559\|Ga0210409_10412081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300021560\|Ga0126371_12911005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300021560\|Ga0126371_13652246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300025928\|Ga0207700_10190784	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300027014\|Ga0207815_1023780	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027071\|Ga0209214_1061649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027674\|Ga0209118_1065648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1052	Open in IMG/M
3300027874\|Ga0209465_10398628	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300027898\|Ga0209067_10399733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	769	Open in IMG/M
3300027898\|Ga0209067_10687635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300027911\|Ga0209698_10974526	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300028906\|Ga0308309_11543306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031573\|Ga0310915_11139018	Not Available	541	Open in IMG/M
3300031668\|Ga0318542_10166290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300031719\|Ga0306917_10113938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1960	Open in IMG/M
3300031720\|Ga0307469_10253031	Not Available	1419	Open in IMG/M
3300031819\|Ga0318568_10346221	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300031833\|Ga0310917_10546307	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300031879\|Ga0306919_11267000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300031880\|Ga0318544_10135934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300031890\|Ga0306925_10655086	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031890\|Ga0306925_11693879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031910\|Ga0306923_10052173	All Organisms → cellular organisms → Bacteria → Acidobacteria	4516	Open in IMG/M
3300031910\|Ga0306923_12555342	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031912\|Ga0306921_10279594	Not Available	1955	Open in IMG/M
3300031912\|Ga0306921_11945735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031912\|Ga0306921_12627759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031941\|Ga0310912_10085208	All Organisms → cellular organisms → Bacteria → Acidobacteria	2302	Open in IMG/M
3300031942\|Ga0310916_10519164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300031945\|Ga0310913_10419393	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300031947\|Ga0310909_11470402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031954\|Ga0306926_10024717	All Organisms → cellular organisms → Bacteria → Acidobacteria	6972	Open in IMG/M
3300031954\|Ga0306926_11383227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300031954\|Ga0306926_12778811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300032076\|Ga0306924_10711348	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300032076\|Ga0306924_11615415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300032180\|Ga0307471_101962075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300032261\|Ga0306920_100073642	All Organisms → cellular organisms → Bacteria	5009	Open in IMG/M
3300032261\|Ga0306920_100592345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1641	Open in IMG/M
3300032783\|Ga0335079_10680461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1077	Open in IMG/M
3300033412\|Ga0310810_10883414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.67%
Aquatic	Environmental → Aquatic	7.41%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.67%
Sediment	Environmental → Aquatic → Sediment	5.56%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.07%
Loam	Environmental → Terrestrial → Soil → Loam	9.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089678

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070710_112166671	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DAGNPSGCKDGLGHLLKTDQRGMPRPDPEDTGGCDMGAFERQTD*
Ga0066687_104916051	3300005454	Soil	IDAGNPSGCTDGLGHLLKTDQRGMPRPDTEDTAGCDMGAYERQSD*
Ga0070699_1018487432	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IDAGNPSGCTDGLGHLLKTDQRGKPRPDTEDTGGCDMGAYESQSVE*
Ga0070735_103661053	3300005534	Surface Soil	MMSDPSGCTDGNGHLLKTDQRGKPRHDKEGTGGCDMSAYERQRD*
Ga0070732_102543432	3300005542	Surface Soil	SGCTDSLGHLLKTDQRGMPRPNPEDTGGCDMGALSGTGQ*
Ga0070664_1003955262	3300005564	Corn Rhizosphere	CTDNVGQLLKTDQRGKPRPDPEDTGGCDIGAYERQSD*
Ga0066903_1043402681	3300005764	Tropical Forest Soil	PSGCKDSKGNLLKTDQRGMPRPNSEDTGGCDMGAYERQSD*
Ga0066903_1065746372	3300005764	Tropical Forest Soil	SGCTDRLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD*
Ga0075029_1005503421	3300006052	Watersheds	GCTDGLGHLLKTDQRGKPRPDREDSGGCDMGAYESQSD*
Ga0075019_107573231	3300006086	Watersheds	GCTDGQGHLLTTDQRGMPRPDKEDSGGCDVGAYESQSD*
Ga0075030_1012074822	3300006162	Watersheds	SGCTDGKGKLLKTDQRGAPRPDKEDKTGCDMGAFERQSD*
Ga0126374_109992732	3300009792	Tropical Forest Soil	TDGHGNLLKTDQRGLPRPDPEDTGGCDMGAYERQLD*
Ga0116219_108335481	3300009824	Peatlands Soil	GCTDGNGNLLKTDQRGKPRPDKEDTSGCDIGAYERQSD*
Ga0126380_109420271	3300010043	Tropical Forest Soil	PHERLLKTDQRGKPRPDQEDTGGCDMGAYERQSD*
Ga0126373_109663461	3300010048	Tropical Forest Soil	PGGCTDALGNRLTTDQRGMPRPDREDKAGCDRGAYESQSD*
Ga0126373_115360131	3300010048	Tropical Forest Soil	PSGCKDGKGNLLKTDQRGMPRPDKEDTGGCDMGAFERQSD*
Ga0126373_121378961	3300010048	Tropical Forest Soil	NLGVLLKTDQRGMPRPDKEDTGGCDRGAYERQLD*
Ga0126373_129503043	3300010048	Tropical Forest Soil	CTDGQGHLLKTDQRGMPRPDKEDSVGCDIGAYESQSDQP*
Ga0126370_104264262	3300010358	Tropical Forest Soil	CCTNGGGRLLKTDQRGMPRPDPEDTGGCDMGAYESQND*
Ga0126376_128724511	3300010359	Tropical Forest Soil	PAGCTDSLGHPLKADQRGKPRPDPEDTGGCDMGAFERQSD*
Ga0126372_128079591	3300010360	Tropical Forest Soil	PSGCTNALGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD*
Ga0126381_1005864863	3300010376	Tropical Forest Soil	MHPKGCTDGQGHLPKTDQRGMPHPDHEDPGCDMGAYERQSD*
Ga0126381_1015010762	3300010376	Tropical Forest Soil	PAGCTDNTGNLLKTDQRGMPRPDKEDTGGCDMGAYESQSD*
Ga0126381_1025234491	3300010376	Tropical Forest Soil	DAGNPSGCTDGSGHLLKTDQRGKPRPDTEDKGGCDMGAYERQSD*
Ga0126381_1037517091	3300010376	Tropical Forest Soil	AIDAGNSNGCRDNHGNLLKTDQRGMPRHDPEDTRGCDMGAYESQSD*
Ga0126381_1046301671	3300010376	Tropical Forest Soil	SGCKDSFGNLLKTDQRGQPRPDKEDKTGCDMGAYESPSD*
Ga0126381_1048960182	3300010376	Tropical Forest Soil	TDGQGQLLKTDQRGMPRPDKEDIVGCDIGAYERQSD*
Ga0126383_110503601	3300010398	Tropical Forest Soil	WTDGAGHQLTTDQRGKPRPDTEDSGGCDIGAYERQSD*
Ga0126383_113793222	3300010398	Tropical Forest Soil	IDAGNPSGCTDGQGHLLKTDQRGMPRPDQEDSGGCDMGAYERQSD*
Ga0126383_121775322	3300010398	Tropical Forest Soil	DRLGHLLKTDQRGLPRPDTEDKSGCDMGAYERQSD*
Ga0138575_10051101	3300011081	Peatlands Soil	TDSHGNLLKTDQRGKPRPDPGDPSGCDIGAYERQKN*
Ga0137389_111580422	3300012096	Vadose Zone Soil	CTDGQGHLLKTDQRGKPRPDIEDTAGCDRGAFERQSD*
Ga0137381_108068221	3300012207	Vadose Zone Soil	NPNGCTDGQGHLLKTDQRGKPRPDIEDTAGCDRGAFEHQSD*
Ga0137378_112322081	3300012210	Vadose Zone Soil	AGNPSGCTDGLGHLLKTDQRGKPRPNTEDTGGCDMGAYERQSD*
Ga0137360_109228391	3300012361	Vadose Zone Soil	DQGNLLKTDQRGLPRPDHEDTGGRDIGAYENQSD*
Ga0137419_116955091	3300012925	Vadose Zone Soil	GQGHLLKTDQRVKTDQRGKPRPDKEDSSGCDMGAYESQSD*
Ga0164301_118893581	3300012960	Soil	NPNGCTDGNGHLLKTDQRGAPRPDKEDNGVGCDMGAFERQSD*
Ga0182036_110054351	3300016270	Soil	NPNGCTDVQGHLLTTDQRGKPRPDKEDSGGCDMGAYERQSD
Ga0182036_116479322	3300016270	Soil	GNPSGCTDGNGHLLKTDQRRYPRRDKEDTFGCDMGA
Ga0182041_110527412	3300016294	Soil	TDGLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0182033_118086861	3300016319	Soil	GNPSGCIDGQGRLLTTDQRGMPRPDKEDAVGCDMGAYESQSDQP
Ga0182035_107275871	3300016341	Soil	GCTDGQGALLKIDQRGLPRPNREDTGACDMGAYERQGD
Ga0182035_109770611	3300016341	Soil	LRYFCNPAGCTDGQGDLLKTDQRGMPRPDKEDSVGCDMGAYESQSD
Ga0182032_100639261	3300016357	Soil	SGCTDGLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0182040_100987582	3300016387	Soil	AGNPSGCTDGLGHLLETDQRGLPRPNTEDRSGCDMGAYERQGD
Ga0187778_105598481	3300017961	Tropical Peatland	NPAGCTDGRGHLLATDQRGMPRPDPEDSGGCDMGAYESQSD
Ga0187776_109647762	3300017966	Tropical Peatland	TNGNGDLLTTDQRGAPRPDNEDKGIGCDMGAYERQTD
Ga0187781_107171581	3300017972	Tropical Peatland	GCTDGQGHLLTTDQRGYPRPGEDKQDKRCDMGAYESQSD
Ga0187777_101120022	3300017974	Tropical Peatland	DAGNPSGCTDGNGHLLKTDQRGQPRPDKEDKAGCDIGAYERQSD
Ga0187777_103432882	3300017974	Tropical Peatland	GNPSGCRDGNGNLLKTDQRGQPRPDKEDTGGCDMGAYESQRD
Ga0187804_100577362	3300018006	Freshwater Sediment	CTDGQGHLLKTDQRGQPRPDAEDSGGCDMGAYERQSD
Ga0187805_102584821	3300018007	Freshwater Sediment	PNGCTDGKGHLLKTDQRGKPRPDKEDTGGCDRGAFERQTD
Ga0187771_103953051	3300018088	Tropical Peatland	DAGNPGGCTDGNGHLLKTDQRGYPRPDKEDKSGCDMGAYERQED
Ga0187771_111544611	3300018088	Tropical Peatland	TDGKGKLLKTDQRGKRRPDKEDTSGCDMGAYEKQSD
Ga0187796_10328202	3300019264	Peatland	KGCTDASGHLLTTDQRGDPRPDPEDTGGCDLGAYESQSD
Ga0193728_13292342	3300019890	Soil	CTDNVGQLLTTDQRGQPRPDKEDTGGCDMGAYERPTD
Ga0210407_106250621	3300020579	Soil	TDGSGHLLKTDQRGAPRPDKEDTGGCDIGAFERQSD
Ga0210403_106404302	3300020580	Soil	DSNGHLLKTDQRGEPRPDKEDSGGCDRGAYERQKD
Ga0210399_105660762	3300020581	Soil	LGNSNGGADGNGHVLKTDQRGKLRPDKEGKSGCNMGAYERQKD
Ga0210404_102093231	3300021088	Soil	IDSGNPGGCTDGRGHLLKTDQRGKPRPDREDSGGCDRGAYERQKD
Ga0210406_101711283	3300021168	Soil	SGCTDGQGRLLKTDQRGKPRPDKEDTGGCDRGAYERQKD
Ga0210393_113641051	3300021401	Soil	DGRGHLLKTDQRGYPRPGRYKYDKRCDIGAYERQTD
Ga0210397_113541802	3300021403	Soil	TDSHGHLLKTDQRGKPRPDKKSRRCDMGAYERQKD
Ga0210387_103749721	3300021405	Soil	DSQGHPLKADQRGKPRPDNEDSGGCDMGAYERQKD
Ga0210387_116569532	3300021405	Soil	LGNSNGGADGNGHVLKTDQRGKLRPDQEGKSGCNMGAYERQKD
Ga0210390_113224841	3300021474	Soil	NPSGCTDGNGHLLKTDQRGKPRPDREDTGGCDMGAYERQKD
Ga0210402_100692384	3300021478	Soil	TDQKGHLLKTDQRGLPRPDKEDKGGCDMGAYESQRD
Ga0210409_104120811	3300021559	Soil	IDAGKPSGCTDGHGHLLKTDQRAKPRPEKEDTRGCDMGAYERQKD
Ga0126371_129110051	3300021560	Tropical Forest Soil	SGCTDGLGHLLKTDQPGLPRPDREDKTGCDMGAYERQSD
Ga0126371_136522461	3300021560	Tropical Forest Soil	GNPGGCTDGQGRLLRTDQRGMSRPDPEDTGGCDMGAYESQSD
Ga0207700_101907844	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GCTDGNGHLLKTDQRGKPRPDKEDSGGCDTGASERQ
Ga0207815_10237803	3300027014	Tropical Forest Soil	SGCTDGQGNLLKTDQRGMPRPDHEDTGGCDIGAYENQTD
Ga0209214_10616492	3300027071	Forest Soil	NPSGCTDGLGHLLKTDQRGAPRPNKEDLGGCDIGAYERQGD
Ga0209118_10656483	3300027674	Forest Soil	VDAGNPLGCKDNLGHLLKTDQRGQLRTDTEDASGCDMGAYESPRD
Ga0209465_103986282	3300027874	Tropical Forest Soil	GCTDGNGHLLKTDQRGMPRHDPEDTRGCDIGAYESQRD
Ga0209067_103997332	3300027898	Watersheds	GCTDGQGHLLTTDQRGMPRPDKEDSGGCDVGAYESQSD
Ga0209067_106876351	3300027898	Watersheds	DKGNPSGCTDNHGHVLKTDQRGQPRPNKTDTIGCDLGAYESQIY
Ga0209698_109745262	3300027911	Watersheds	DTNGHLLKTDQRGQPRPDKEDKTGCDIGAYESATD
Ga0308309_115433061	3300028906	Soil	AAIDSGNPNGCTDGKGNLLKTDQRGEPRPDKEDESGCDRGAYERQTD
Ga0310915_111390181	3300031573	Soil	GHLLKTDQRGMPRPNTEDIEDKKGCDMGAYERQSD
Ga0318542_101662902	3300031668	Soil	DGSGHLLKTDQRGMPRPDSDDTTNPRCDMGAYETQN
Ga0306917_101139382	3300031719	Soil	LPVSRAIDPGNPSDCTDGQGHLLKTDHRGQLHPDKEDTSGCDMGACEKQSD
Ga0307469_102530312	3300031720	Hardwood Forest Soil	GCTDGHGNLLKTDQRGMPRPDPEDTGGCDMGAYERQSD
Ga0318568_103462212	3300031819	Soil	TDGHGILLKTDQRGQPRPDKEDKIGCDMGAFERQSD
Ga0310917_105463072	3300031833	Soil	DGQGHLLKTDQRGQPRPDKEDQPDKLGCDMGAYERQSD
Ga0306919_112670001	3300031879	Soil	SGCTDNTGKLLKTDQRGMPRPDKEDTGGCDMGAYESQTD
Ga0318544_101359341	3300031880	Soil	DAGNPSGCTDGLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0306925_106550862	3300031890	Soil	NPSGCTDGQGHLLKTDQRGYPRPNTEDIEDKKGCDMGAFEKQSD
Ga0306925_116938792	3300031890	Soil	SGCKDSQGKLLKTDQRGMPRPDKEDTVGCDRGAFERQSD
Ga0306923_100521732	3300031910	Soil	MALLPVSRAIDAGNPSDCTDGQGHLLKTDHRGQLHPDKEDTSGCDMGACEKQSD
Ga0306923_125553422	3300031910	Soil	NPSGCTDGNGHLLKTDQRGYPRPDKEEKTGCDMGAYEK
Ga0306921_102795941	3300031912	Soil	NPSGCTDGKGKLLATDERGMPRPDKPDDKTGCDMGAYESQSD
Ga0306921_119457352	3300031912	Soil	IDAANPLGCTDGAGHLLKTDQRGMPRPDKEDTGGCDMGAYERQSD
Ga0306921_126277591	3300031912	Soil	CTGSGNLLKTDQRGAPRPDPEDSGGCDIGAFERQKD
Ga0310912_100852083	3300031941	Soil	DGVGPGWAFLHLPTTDQRGYPRPDKEDTFGCDIGAYERQSD
Ga0310916_105191641	3300031942	Soil	NPNGCTDSQGNLLKTDQRGLPRPDQEGKSGCDMGAYESQND
Ga0310913_104193933	3300031945	Soil	GNPSGCTDGNGHLLKTDQRRYPRRDKEDTFGCDMGAYERQSD
Ga0310909_114704022	3300031947	Soil	GCTDGLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0306926_100247174	3300031954	Soil	MALLPVSRAIDPGNPSDCTDGQGHLLKTDHRGQLHPDKEDTSGCDMGACEKQSD
Ga0306926_113832272	3300031954	Soil	NPSGCTDRLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0306926_127788111	3300031954	Soil	TDGLGHLLKTDQRAMPRPDKEDKTGCDMGAYERQSD
Ga0306924_107113481	3300032076	Soil	AIDPGNPSDCTDGQGHLLKTDHRGQLHPDKEDTSGCDMGACEKQSD
Ga0306924_116154152	3300032076	Soil	CTDVQGHLLTTDQRGKPRPDKEDSGGCDMGAYERQSD
Ga0307471_1019620752	3300032180	Hardwood Forest Soil	DGSGHLLKTDQRGAPRPNKEDTGGCDMGAFERQSD
Ga0306920_1000736421	3300032261	Soil	MALLPVSRAIDAGNPSDCTDGQGHLLKTDHRGQLHPDKEDTSGCDMGACEKQS
Ga0306920_1005923454	3300032261	Soil	DGLGHLLRTDQRGLPRPDTEDKSGCDMGAYERQSD
Ga0335079_106804612	3300032783	Soil	TDGSGHLLKTDQRGRPRPDKEDTGGCDMGAYERQSD
Ga0310810_108834141	3300033412	Soil	DVNGRLLKTDQRGAPRPDKEDTGGCDMGAFERQSD

Hidden Markov Model


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