Metagenome Family F089583

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089583
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	49 residues
Representative Sequence	MAPKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY
Number of Associated Samples	74
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.85 %
% of genes near scaffold ends (potentially truncated)	44.95 %
% of genes from short scaffolds (< 2000 bps)	83.49 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.881 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.615 % of family members)
Environment Ontology (ENVO)	Unclassified (50.459 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.046 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04392	ABC_sub_bind	2.75
PF01381	HTH_3	1.83
PF14023	DUF4239	1.83
PF00589	Phage_integrase	1.83
PF07883	Cupin_2	0.92
PF10908	DUF2778	0.92
PF00239	Resolvase	0.92
PF07690	MFS_1	0.92
PF13333	rve_2	0.92
PF01527	HTH_Tnp_1	0.92
PF01022	HTH_5	0.92
PF04519	Bactofilin	0.92
PF01738	DLH	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.75
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.92
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.92
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
All Organisms	root	All Organisms	43.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
cellular organisms	root	All Organisms → cellular organisms	43.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	18.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01EDKGK	Not Available	500	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10168065	Not Available	522	Open in IMG/M
3300000956\|JGI10216J12902_101619416	Not Available	719	Open in IMG/M
3300004157\|Ga0062590_103046102	Not Available	502	Open in IMG/M
3300004479\|Ga0062595_101824284	Not Available	579	Open in IMG/M
3300005332\|Ga0066388_100986227	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300005332\|Ga0066388_101094729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1348	Open in IMG/M
3300005332\|Ga0066388_101250890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1274	Open in IMG/M
3300005332\|Ga0066388_101387293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1219	Open in IMG/M
3300005332\|Ga0066388_102483702	Not Available	941	Open in IMG/M
3300005332\|Ga0066388_102949853	Not Available	869	Open in IMG/M
3300005332\|Ga0066388_103209507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300005332\|Ga0066388_103301000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300005332\|Ga0066388_107070372	Not Available	564	Open in IMG/M
3300005332\|Ga0066388_108430255	Not Available	513	Open in IMG/M
3300005435\|Ga0070714_100559350	Not Available	1096	Open in IMG/M
3300005546\|Ga0070696_100846570	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005713\|Ga0066905_100368031	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005713\|Ga0066905_101773974	Not Available	569	Open in IMG/M
3300005713\|Ga0066905_102066548	Not Available	529	Open in IMG/M
3300005713\|Ga0066905_102284855	Not Available	505	Open in IMG/M
3300005764\|Ga0066903_100398620	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300005764\|Ga0066903_101436763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1298	Open in IMG/M
3300005764\|Ga0066903_101664692	Not Available	1213	Open in IMG/M
3300005764\|Ga0066903_102698711	Not Available	963	Open in IMG/M
3300005764\|Ga0066903_103296866	Not Available	872	Open in IMG/M
3300005764\|Ga0066903_103365465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300005764\|Ga0066903_105675535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300005764\|Ga0066903_107580486	Not Available	559	Open in IMG/M
3300009143\|Ga0099792_10629941	Not Available	687	Open in IMG/M
3300009176\|Ga0105242_13316581	Not Available	501	Open in IMG/M
3300010043\|Ga0126380_10794965	Not Available	773	Open in IMG/M
3300010047\|Ga0126382_10179229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300010048\|Ga0126373_10884710	Not Available	957	Open in IMG/M
3300010048\|Ga0126373_12863267	Not Available	538	Open in IMG/M
3300010360\|Ga0126372_10672328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300010360\|Ga0126372_11040347	Not Available	833	Open in IMG/M
3300010361\|Ga0126378_10565800	Not Available	1251	Open in IMG/M
3300010362\|Ga0126377_10547046	Not Available	1196	Open in IMG/M
3300010376\|Ga0126381_104084290	Not Available	567	Open in IMG/M
3300010398\|Ga0126383_11349136	Not Available	803	Open in IMG/M
3300010398\|Ga0126383_12941816	Not Available	556	Open in IMG/M
3300010868\|Ga0124844_1035885	Not Available	1632	Open in IMG/M
3300010868\|Ga0124844_1119178	Not Available	1007	Open in IMG/M
3300012202\|Ga0137363_10284671	Not Available	1353	Open in IMG/M
3300012924\|Ga0137413_10066418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2146	Open in IMG/M
3300016294\|Ga0182041_10554280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300016319\|Ga0182033_10276748	Not Available	1375	Open in IMG/M
3300016319\|Ga0182033_10404534	Not Available	1154	Open in IMG/M
3300016319\|Ga0182033_12062712	Not Available	520	Open in IMG/M
3300016341\|Ga0182035_10306524	Not Available	1304	Open in IMG/M
3300016357\|Ga0182032_11378146	Not Available	610	Open in IMG/M
3300016387\|Ga0182040_10311742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1207	Open in IMG/M
3300016404\|Ga0182037_10074060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2367	Open in IMG/M
3300016445\|Ga0182038_11473744	Not Available	611	Open in IMG/M
3300021475\|Ga0210392_10504623	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300021478\|Ga0210402_11041502	Not Available	745	Open in IMG/M
3300021560\|Ga0126371_11052311	Not Available	954	Open in IMG/M
3300024347\|Ga0179591_1250170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2165	Open in IMG/M
3300027903\|Ga0209488_10097172	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300027903\|Ga0209488_10106917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2100	Open in IMG/M
3300028718\|Ga0307307_10253479	Not Available	562	Open in IMG/M
3300031543\|Ga0318516_10009952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4559	Open in IMG/M
3300031545\|Ga0318541_10069387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1845	Open in IMG/M
3300031545\|Ga0318541_10080461	Not Available	1723	Open in IMG/M
3300031546\|Ga0318538_10005303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4890	Open in IMG/M
3300031549\|Ga0318571_10412305	Not Available	529	Open in IMG/M
3300031564\|Ga0318573_10806082	Not Available	504	Open in IMG/M
3300031572\|Ga0318515_10569183	Not Available	603	Open in IMG/M
3300031573\|Ga0310915_10061820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2444	Open in IMG/M
3300031573\|Ga0310915_10149781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1612	Open in IMG/M
3300031573\|Ga0310915_10257059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300031679\|Ga0318561_10057535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1963	Open in IMG/M
3300031744\|Ga0306918_10015893	All Organisms → cellular organisms → Bacteria → Proteobacteria	4428	Open in IMG/M
3300031744\|Ga0306918_10080841	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300031744\|Ga0306918_10088066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2178	Open in IMG/M
3300031747\|Ga0318502_10660566	Not Available	631	Open in IMG/M
3300031748\|Ga0318492_10186952	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031751\|Ga0318494_10359881	Not Available	842	Open in IMG/M
3300031763\|Ga0318537_10107664	Not Available	1033	Open in IMG/M
3300031765\|Ga0318554_10182026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1196	Open in IMG/M
3300031765\|Ga0318554_10339330	Not Available	854	Open in IMG/M
3300031768\|Ga0318509_10041587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2303	Open in IMG/M
3300031771\|Ga0318546_10645765	Not Available	744	Open in IMG/M
3300031778\|Ga0318498_10524713	Not Available	520	Open in IMG/M
3300031779\|Ga0318566_10499195	Not Available	596	Open in IMG/M
3300031795\|Ga0318557_10089892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1348	Open in IMG/M
3300031795\|Ga0318557_10378729	Not Available	650	Open in IMG/M
3300031797\|Ga0318550_10035186	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300031798\|Ga0318523_10245712	Not Available	894	Open in IMG/M
3300031846\|Ga0318512_10025776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2475	Open in IMG/M
3300031846\|Ga0318512_10219662	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300031879\|Ga0306919_10037338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3121	Open in IMG/M
3300031896\|Ga0318551_10661803	Not Available	604	Open in IMG/M
3300031896\|Ga0318551_10897896	Not Available	517	Open in IMG/M
3300031897\|Ga0318520_10746451	Not Available	613	Open in IMG/M
3300031912\|Ga0306921_10357060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1708	Open in IMG/M
3300031941\|Ga0310912_10050695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2915	Open in IMG/M
3300031945\|Ga0310913_10580122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300031954\|Ga0306926_11351266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300032025\|Ga0318507_10333557	Not Available	660	Open in IMG/M
3300032042\|Ga0318545_10228467	Not Available	667	Open in IMG/M
3300032043\|Ga0318556_10224627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	979	Open in IMG/M
3300032052\|Ga0318506_10187284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300032059\|Ga0318533_10845687	Not Available	671	Open in IMG/M
3300032065\|Ga0318513_10152744	Not Available	1102	Open in IMG/M
3300032076\|Ga0306924_10948432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300033289\|Ga0310914_11807238	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.08%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.23%
Loam	Environmental → Terrestrial → Soil → Loam	23.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	22.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_09401670	2170459024	Grass Soil	MAPRSKPKLARFVFVVGMAVTILAILMWRSRDLAAPIPPTESIYRAQHLILY
AF_2010_repII_A1DRAFT_101680652	3300000597	Forest Soil	VAPKPGPARLAFVFGMAVTILAIMMWLSRELAAPIPPTEPIYQAQHLNLY*
JGI10216J12902_1016194161	3300000956	Soil	MAPKPKGARFALVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY*
Ga0062590_1030461022	3300004157	Soil	MAPKPKPRLARFVFVFGMAVTILAILMWRSRDLAASIPPTEPVYRAQHLILY*
Ga0062595_1018242842	3300004479	Soil	MAPKPKPKLAKFVFVFGMTVTILAILMWRSRDLAAPIPPTEPVYRAQHLILY*
Ga0066388_1009862273	3300005332	Tropical Forest Soil	MAPRPKPKLVRFVFVFGMALTILAILMWRSHDLAAPIPPTEAIYRAQHLILY*
Ga0066388_1010947293	3300005332	Tropical Forest Soil	MARKPKPKLARFVFVFAMAMTILTILMWRSRDLAAPIPPTESIYRAQHLISY*
Ga0066388_1012508903	3300005332	Tropical Forest Soil	MAPKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY*
Ga0066388_1013872932	3300005332	Tropical Forest Soil	VAPKPERARLAFAVGIVLAMAVTILAILTWTRRDLAAPIPPTESIYQPQHLILY*
Ga0066388_1024837022	3300005332	Tropical Forest Soil	MAPKPKPKPKLARFVFVFGMAVTILAILMWQSRDLAAPVPPTESVYRAQHFILY*
Ga0066388_1029498532	3300005332	Tropical Forest Soil	VAPKPERARLAFAFGVVLAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHLILY*
Ga0066388_1032095071	3300005332	Tropical Forest Soil	MAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQS
Ga0066388_1033010002	3300005332	Tropical Forest Soil	MAPKLKLARFVFVFGMAVTILAILVWQSRDLAAPIPATESIYRAQHLILY*
Ga0066388_1070703721	3300005332	Tropical Forest Soil	VAPKPKLKPARFVFVFGMAVTILAILTWLSRDLAAPTPPTESIYQPQHLILY*
Ga0066388_1084302552	3300005332	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVAILVILTWLSRDLAAPPLPTESIYRAQSLILY*
Ga0070714_1005593503	3300005435	Agricultural Soil	MAPKSKPRLARFVFVFGMAVTILAILMWRSRDLAAPIPPTEPVYRAQHLILY*
Ga0070696_1008465702	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRPKPKLVRFVLVFGMAMTILAILMWRSRDLAAPIPPTESIYRAQHLILY*
Ga0066905_1003680311	3300005713	Tropical Forest Soil	MAPKPEPARLAFVFGMVLAMAVTILAILTWTRRDLAAPTPPTEAIYRPQHLNLY*
Ga0066905_1017739741	3300005713	Tropical Forest Soil	MTPKPKPKLARFVFVFGMALTILAVLMWRSRDLAAPIPPTESIYRAQHLILY*
Ga0066905_1020665481	3300005713	Tropical Forest Soil	VAPKPKLKPARFVFVFGMAVTILAILTWVSRDLAAPTPPTESIYQP
Ga0066905_1022848551	3300005713	Tropical Forest Soil	MAPKPKLKPARFVFVFGMAVTILAILTWLSRDLAAPNPPTEPTYQPQHLILY*
Ga0066903_1003986201	3300005764	Tropical Forest Soil	MAPKQKPKLARFIFVFGMAVTILAILMWRSRDLAAPIPPTETIYRAQHLILY*
Ga0066903_1014367632	3300005764	Tropical Forest Soil	VAPKPHPGRLAFVFGMAVTILAIMMWLSRELTAPIPPTEPIYQAQHLNLY*
Ga0066903_1016646922	3300005764	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTILAILMWQSRDLAAPIPPTESVYRAQHLILY*
Ga0066903_1026987111	3300005764	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTIMAILMWRSRDLAAPIPPTESIYRAQHLIL
Ga0066903_1032968661	3300005764	Tropical Forest Soil	MAPKPKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQ
Ga0066903_1033654651	3300005764	Tropical Forest Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY*
Ga0066903_1056755351	3300005764	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTILAILMWQSRDLAAPVPP
Ga0066903_1075804862	3300005764	Tropical Forest Soil	VAPKPERARLAFAFGMVLAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHLILY*
Ga0099792_106299411	3300009143	Vadose Zone Soil	MAPKPEQARLAFAFGMVLAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHRILY*
Ga0105242_133165811	3300009176	Miscanthus Rhizosphere	MAPKPKPKLARFVFVFGMAVTILAILMWRSRDLAAPIPPTEPVYRAQHLILY*
Ga0126380_107949651	3300010043	Tropical Forest Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY*
Ga0126382_101792292	3300010047	Tropical Forest Soil	MAPKPKGARFAFVFGLAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY*
Ga0126373_108847102	3300010048	Tropical Forest Soil	MAPKSKPKPKLARFLFVFGMAVTILAILMWQSRDLAAPVPPTESVYRAQH
Ga0126373_128632672	3300010048	Tropical Forest Soil	MAPKPKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY*
Ga0126372_106723282	3300010360	Tropical Forest Soil	MAPKSKPARLAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY*
Ga0126372_110403473	3300010360	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTILAILVWQSRDLAAPIPATESIYRAQHLILY*
Ga0126378_105658004	3300010361	Tropical Forest Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY*
Ga0126377_105470461	3300010362	Tropical Forest Soil	MVPKPEGARFAFVFGLAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY*
Ga0126381_1040842901	3300010376	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTILAILMWQSRDLAAPVPPTESVYRAQLFILY*
Ga0126383_113491362	3300010398	Tropical Forest Soil	MAPKPKPKLARFVFVFGMAVTILAILMWQSRDLAAPVPPTESVYRAQHFILY*
Ga0126383_129418162	3300010398	Tropical Forest Soil	KPKLKPARFVFVFGMAVTILAILTWLSRDLAAPNPPTEPTYQPQHLILY*
Ga0124844_10358853	3300010868	Tropical Forest Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLAALAPPTEPIYQSQLLLLY*
Ga0124844_11191781	3300010868	Tropical Forest Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLPALAPPTEPIYQSQLLLLY*
Ga0137363_102846712	3300012202	Vadose Zone Soil	VAPTPARLAFVFGMAVTILAIMMWLSRELAAPIPPTEPIYQTQHLNLY*
Ga0137359_112595271	3300012923	Vadose Zone Soil	VAPKPERARLAFAFGMVLAMAVIILAILTWTRRDLAAPIPPTESIYQPQHLILY*
Ga0137413_100664182	3300012924	Vadose Zone Soil	MAPKPKPKLARFVFVFGMAVTILAILMWRSRDLAAPIPPTESIYRAQHLILY*
Ga0182041_105542801	3300016294	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPT
Ga0182033_102767481	3300016319	Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQ
Ga0182033_104045341	3300016319	Soil	LKPARFVFVFGMAVTILGILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0182033_120627122	3300016319	Soil	VAPKPKLKPPRFVFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQSQ
Ga0182035_103065244	3300016341	Soil	YMAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0182032_113781462	3300016357	Soil	LPPQRLAAVGPAFLVAFVFGMAVTILAIMMWLSRELAAPIPPTEPIYQAQHLNLY
Ga0182040_103117422	3300016387	Soil	MAPKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY
Ga0182037_100740601	3300016404	Soil	MAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEP
Ga0182038_114737441	3300016445	Soil	ARVAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY
Ga0210392_105046232	3300021475	Soil	MAPKPKPKLARFVFVFGMAVTILAILMWRSRDLAAPIPPTESVYRAQHLILY
Ga0210402_110415022	3300021478	Soil	VAPNPEAVRLAFVFGMAATILVIMTWLSRDLAAPNPPTEAIYQPQHSNVY
Ga0126371_110523111	3300021560	Tropical Forest Soil	MAPKQKPQLARFIFVFGMAVTILAILMWRRRDLAAPIPPTETIYRAQHLILY
Ga0179591_12501702	3300024347	Vadose Zone Soil	MAPRPKPKLARFVFVFGMAVTILAILMWRSRDLAAPIPPTESIYRAQHLILY
Ga0209488_100971723	3300027903	Vadose Zone Soil	MAPGPKPKLARFVFVFGMAVTILAILMWRSRDLAAPIPPTESIYRAQHLILY
Ga0209488_101069174	3300027903	Vadose Zone Soil	MAPKPEQARLAFAFGMVLAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHRILY
Ga0307307_102534791	3300028718	Soil	VAPKPERARLAFVFGIALAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHRILY
Ga0318516_100099524	3300031543	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318541_100693872	3300031545	Soil	MAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318541_100804614	3300031545	Soil	VAPKPERARLAFAFGMVLAMAVTILAILTWTRRDLAAPIPPTEPIYQPQHLILY
Ga0318538_100053035	3300031546	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318571_104123051	3300031549	Soil	GGGDVAPKLEPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHLILY
Ga0318573_108060821	3300031564	Soil	YMAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318515_105691832	3300031572	Soil	MAPKPNLKPARFVFVFGMAVTILAILTWLSRDLAAPNPPTEPTYQPQHLILY
Ga0310915_100618202	3300031573	Soil	VAPKPKLKPARFVFVFGMAVTILGILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0310915_101497811	3300031573	Soil	LAPGGGDVAPKLEPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHLILY
Ga0310915_102570595	3300031573	Soil	PKPKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY
Ga0318561_100575351	3300031679	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTE
Ga0306918_100158938	3300031744	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLL
Ga0306918_100808411	3300031744	Soil	VAPKLEPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHLILY
Ga0306918_100880667	3300031744	Soil	MAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPT
Ga0318502_106605663	3300031747	Soil	ARFVFVFGMAVTILAILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0318492_101869523	3300031748	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQ
Ga0318494_103598811	3300031751	Soil	RFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318537_101076644	3300031763	Soil	EPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHLILY
Ga0318554_101820264	3300031765	Soil	EGYMAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318554_103393301	3300031765	Soil	MAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQ
Ga0318509_100415872	3300031768	Soil	MGPKPARFVFVFGMAVTILAILTWLSHDLAAPTPPTEPIYQPQHLISY
Ga0318546_106457651	3300031771	Soil	STWRQEGYMAPKPKGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY
Ga0318498_105247131	3300031778	Soil	GYMAPKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318566_104991951	3300031779	Soil	LKPARFVFVFGMAVTILAILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0318557_100898921	3300031795	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPI
Ga0318557_103787293	3300031795	Soil	EGYMAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318550_100351861	3300031797	Soil	KGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY
Ga0318523_102457121	3300031798	Soil	QEGYMAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318512_100257761	3300031846	Soil	PKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318512_102196623	3300031846	Soil	VAPKLEPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHL
Ga0306919_100373381	3300031879	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIY
Ga0318551_106618031	3300031896	Soil	APKSKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318551_108978961	3300031896	Soil	PKPKGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY
Ga0318520_107464511	3300031897	Soil	MAPKPNLKPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLIL
Ga0306921_103570603	3300031912	Soil	VAPKPKLKPARFVFVFGMAVTILAILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0310912_100506956	3300031941	Soil	MAPKPKPARVAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQ
Ga0310913_105801222	3300031945	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQ
Ga0306926_113512662	3300031954	Soil	VAPKPKLKPPRFVFVFGMAVTILAILTWLSRDLAAPTPPTESIYQPQHLILY
Ga0318507_103335571	3300032025	Soil	DVAPKLEPARLAFVFGMAVTILAILTWLSRDLAAPTPPTEPIYQPQHLILY
Ga0318545_102284671	3300032042	Soil	SKPARFAFVFGMAVTILAMLTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0318556_102246272	3300032043	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLLLY
Ga0318506_101872841	3300032052	Soil	MAPKPKPARFAFVFGMAVTILAMLTWLSRDLAAPTP
Ga0318533_108456871	3300032059	Soil	MAPKPEPARFVFVFGMAVTILAILTWLSRDLAAPSPPTEPIYQPQHLILY
Ga0318513_101527443	3300032065	Soil	MAPKSKPARFAFVFGMAVTILAMRTWLSRDLAAPTPPTEPIYQSQLLLLY
Ga0306924_109484322	3300032076	Soil	IGRGDVAPKPHPARLAFVFGMAVTILAIMMWLSRELAAPIPPTEPIYQAQHLNLY
Ga0310914_118072382	3300033289	Soil	MAPKPKGARFAFVFGMAVTILAMLTWLSRDLAAPAPPTEPIYQSQLLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089583

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences