NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F089564

Metagenome / Metatranscriptome Family F089564

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089564
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 73 residues
Representative Sequence KVGNRTMVSDTRVSNYKEIDGFEIPTEFLVLRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ
Number of Associated Samples 97
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.83 %
% of genes near scaffold ends (potentially truncated) 96.33 %
% of genes from short scaffolds (< 2000 bps) 83.49 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.349 % of family members)
Environment Ontology (ENVO) Unclassified
(35.780 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.202 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.12%    β-sheet: 30.21%    Coil/Unstructured: 66.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF07676PD40 28.44
PF04264YceI 22.94
PF00005ABC_tran 13.76
PF00930DPPIV_N 9.17
PF00581Rhodanese 1.83
PF00899ThiF 1.83
PF02811PHP 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 22.94
COG0823Periplasmic component TolB of the Tol biopolymer transport systemIntracellular trafficking, secretion, and vesicular transport [U] 9.17
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 9.17

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908044|A5_c1_ConsensusfromContig66199All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium638Open in IMG/M
3300001305|C688J14111_10092938All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium917Open in IMG/M
3300001330|A305W6_1032975All Organisms → cellular organisms → Bacteria → FCB group536Open in IMG/M
3300001412|JGI20173J14856_1049464All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium500Open in IMG/M
3300001661|JGI12053J15887_10292105All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium799Open in IMG/M
3300002025|smpD1_1118853All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium662Open in IMG/M
3300004081|Ga0063454_101460465All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium582Open in IMG/M
3300004114|Ga0062593_102920334All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300004156|Ga0062589_102511326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300004463|Ga0063356_106465362All Organisms → cellular organisms → Bacteria → FCB group502Open in IMG/M
3300005295|Ga0065707_10736993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium624Open in IMG/M
3300005328|Ga0070676_10070950All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia2091Open in IMG/M
3300005329|Ga0070683_100051423All Organisms → cellular organisms → Bacteria3815Open in IMG/M
3300005330|Ga0070690_100891572All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium695Open in IMG/M
3300005434|Ga0070709_10114461All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1818Open in IMG/M
3300005435|Ga0070714_100877987All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium870Open in IMG/M
3300005445|Ga0070708_100128217All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2346Open in IMG/M
3300005446|Ga0066686_10670347All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium703Open in IMG/M
3300005447|Ga0066689_10142071All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300005457|Ga0070662_101472155All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6587Open in IMG/M
3300005518|Ga0070699_101961123All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium535Open in IMG/M
3300005545|Ga0070695_100172634All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300005545|Ga0070695_101887667All Organisms → cellular organisms → Bacteria → FCB group502Open in IMG/M
3300005547|Ga0070693_100232762All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_61213Open in IMG/M
3300005564|Ga0070664_101522256All Organisms → cellular organisms → Bacteria → FCB group633Open in IMG/M
3300005578|Ga0068854_102144794All Organisms → cellular organisms → Bacteria → FCB group516Open in IMG/M
3300006046|Ga0066652_100404692All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300006797|Ga0066659_11429536All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium578Open in IMG/M
3300006914|Ga0075436_100367693All Organisms → cellular organisms → Bacteria → FCB group1038Open in IMG/M
3300006954|Ga0079219_10372361All Organisms → cellular organisms → Bacteria → FCB group930Open in IMG/M
3300007076|Ga0075435_101096043All Organisms → cellular organisms → Bacteria → FCB group696Open in IMG/M
3300007740|Ga0104326_128832All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2321Open in IMG/M
3300009143|Ga0099792_11221596All Organisms → cellular organisms → Bacteria → FCB group511Open in IMG/M
3300009176|Ga0105242_10287180All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300009176|Ga0105242_11763250All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6657Open in IMG/M
3300010039|Ga0126309_10074299All Organisms → cellular organisms → Bacteria1691Open in IMG/M
3300010040|Ga0126308_11039146All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium575Open in IMG/M
3300010396|Ga0134126_11966864All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium639Open in IMG/M
3300010400|Ga0134122_10059141All Organisms → cellular organisms → Bacteria2957Open in IMG/M
3300010400|Ga0134122_11218916All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6754Open in IMG/M
3300010403|Ga0134123_10047766All Organisms → cellular organisms → Bacteria3205Open in IMG/M
3300011431|Ga0137438_1085971All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium952Open in IMG/M
3300012003|Ga0120163_1091486All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium675Open in IMG/M
3300012200|Ga0137382_10453972All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium907Open in IMG/M
3300012201|Ga0137365_10868356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium659Open in IMG/M
3300012208|Ga0137376_10012196All Organisms → cellular organisms → Bacteria6230Open in IMG/M
3300012208|Ga0137376_11553098All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium553Open in IMG/M
3300012211|Ga0137377_10894716All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium819Open in IMG/M
3300012212|Ga0150985_104289670All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6921Open in IMG/M
3300012285|Ga0137370_10882991All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium553Open in IMG/M
3300012901|Ga0157288_10216853All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium621Open in IMG/M
3300012944|Ga0137410_10948010All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6730Open in IMG/M
3300012955|Ga0164298_11642451All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300013296|Ga0157374_10118672All Organisms → cellular organisms → Bacteria2551Open in IMG/M
3300013297|Ga0157378_10537159All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1173Open in IMG/M
3300013297|Ga0157378_10795854All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium971Open in IMG/M
3300013503|Ga0120127_10000359All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes9698Open in IMG/M
3300013766|Ga0120181_1001700All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes8855Open in IMG/M
3300013766|Ga0120181_1015901All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2006Open in IMG/M
3300013766|Ga0120181_1046920All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium982Open in IMG/M
3300013768|Ga0120155_1012283All Organisms → cellular organisms → Bacteria2988Open in IMG/M
3300013772|Ga0120158_10062030All Organisms → cellular organisms → Bacteria2482Open in IMG/M
3300014058|Ga0120149_1061325All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium964Open in IMG/M
3300014823|Ga0120170_1108944All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium556Open in IMG/M
3300014827|Ga0120171_1103582All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium714Open in IMG/M
3300015052|Ga0137411_1364868All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium4179Open in IMG/M
3300015076|Ga0167656_1038642All Organisms → cellular organisms → Bacteria → FCB group528Open in IMG/M
3300015079|Ga0167657_1027112All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium717Open in IMG/M
3300015086|Ga0167655_1050316All Organisms → cellular organisms → Bacteria → FCB group620Open in IMG/M
3300015164|Ga0167652_1027887All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1125Open in IMG/M
3300015190|Ga0167651_1108405All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300015371|Ga0132258_10709571All Organisms → cellular organisms → Bacteria2532Open in IMG/M
3300018061|Ga0184619_10414652All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium606Open in IMG/M
3300018061|Ga0184619_10425958All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium596Open in IMG/M
3300018076|Ga0184609_10288908All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium767Open in IMG/M
3300018468|Ga0066662_11365426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium731Open in IMG/M
3300019877|Ga0193722_1024647All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300019878|Ga0193715_1019158All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1486Open in IMG/M
3300020006|Ga0193735_1005024All Organisms → cellular organisms → Bacteria4257Open in IMG/M
3300020018|Ga0193721_1145044All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium577Open in IMG/M
3300020022|Ga0193733_1132057All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium685Open in IMG/M
3300020059|Ga0193745_1069993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium765Open in IMG/M
3300020059|Ga0193745_1134337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300021080|Ga0210382_10400428All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium607Open in IMG/M
3300021411|Ga0193709_1026293All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1408Open in IMG/M
3300022756|Ga0222622_10419156All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium945Open in IMG/M
3300025457|Ga0208850_1000026All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae60999Open in IMG/M
3300025893|Ga0207682_10464107All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6600Open in IMG/M
3300025911|Ga0207654_10444170All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300025929|Ga0207664_10800625All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium848Open in IMG/M
3300025933|Ga0207706_11528349All Organisms → cellular organisms → Bacteria → FCB group543Open in IMG/M
3300025934|Ga0207686_11356228All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6585Open in IMG/M
3300025981|Ga0207640_10304582All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300026041|Ga0207639_11979018All Organisms → cellular organisms → Bacteria → FCB group544Open in IMG/M
3300026524|Ga0209690_1084765All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1327Open in IMG/M
3300027565|Ga0209219_1161505All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium535Open in IMG/M
3300027787|Ga0209074_10011853All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium2183Open in IMG/M
3300028768|Ga0307280_10361944All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium537Open in IMG/M
3300028793|Ga0307299_10189048All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium774Open in IMG/M
3300028793|Ga0307299_10261794All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium650Open in IMG/M
3300028799|Ga0307284_10161042All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium870Open in IMG/M
3300028807|Ga0307305_10198908All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium921Open in IMG/M
3300028807|Ga0307305_10263155All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium787Open in IMG/M
3300028807|Ga0307305_10412756All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300028872|Ga0307314_10084220All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium848Open in IMG/M
3300031114|Ga0308187_10491346All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium503Open in IMG/M
3300031231|Ga0170824_120118892All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300031538|Ga0310888_10894777All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6554Open in IMG/M
3300032174|Ga0307470_11640987All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium539Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.35%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost10.09%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.50%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil4.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.75%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.75%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.83%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.92%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Permafrost And Active Layer SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.92%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.92%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908044Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001330Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-5cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001412Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002025Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007740Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012003Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014823Permafrost microbial communities from Nunavut, Canada - A3_80cm_0MEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015076Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6a, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015079Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015086Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)EnvironmentalOpen in IMG/M
3300015164Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015190Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_c1_002099902124908044SoilQKVGERTTVSDIRVKGYKEIGGFDVPTEFLVIRNGRPVWREEYADVRINADFPAGTFDQATWTDIPIPK
C688J14111_1009293823300001305SoilNGDRTMVSDIRVSSYKEIQGFDVPTEFVVLRNGKPFWREQYADVRINDELPAGTFDQARWNDIPIPK*
A305W6_103297523300001330PermafrostMWVDAERLVLLRFIQRTKSGERTTISDSRVQNYKEIQGFLVPTEFLVLRNGRPVWREEYANVRINEELPDGIFDQARWKDIPIPQ*
JGI20173J14856_104946423300001412Arctic Peat SoilTSNQLWVDRDQLRLVRFIQSQKVGERTTVSDTRVQGYKEIGGFDVPTEFLMIRNGRPIWREEYDDVRINADFPPGTFDQARWNDIPIPK*
JGI12053J15887_1029210513300001661Forest SoilRGKSAEHPVVSDIRVGSYKEIQGYQIPTEFLVIRNGRPVWREQYANVRINEELPAGTFDQALWKDIPIPQ*
smpD1_111885323300002025Permafrost And Active Layer SoilFIQRGKSGGRTIVSDYRVQNYEEIQGYQIPTEFLVIRNGRPVWRERYANVRINEEFPARTFDQARWKEIPIPE*
Ga0063454_10146046523300004081SoilIQAQKNGDRTIVSDIHVLNYKDIQGFDVPTEFVVLRNGKPVWREQYADVRINDEFPAGTFDQARWNDIPIPK*
Ga0062593_10292033423300004114SoilLWVDRDRLRLVRFIQSTKTGDRTMVSDIRVKNYKEIGGFDVPTEFLVIRNGRPFWREEYADVRINVEFPPGTFDQATWNDIPIPK*
Ga0062589_10251132613300004156SoilDIRVKGYKEIGGFDVPTEFLVIRNGRPVWREEYADVRINADFPPGTFDQATWNDIPIPK*
Ga0063356_10646536213300004463Arabidopsis Thaliana RhizosphereDSTSNQMWVDRNHLRLVRFIQRSKMGERTIVSDIRVRNYKEIQGFEVPTEFLVLRNGRPFWREQYADVRVNEEFVVGTFDQAKWYDIPIPK*
Ga0065707_1073699323300005295Switchgrass RhizosphereLVRFIQRSKSGDRTIVSDMRVQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEVFPTGTFDQAKWYDIPIPN*
Ga0070676_1007095013300005328Miscanthus RhizosphereDNLRLVRFIQREKRGDRTIVSDIRVTNYKEIEGFDLPTEFLVLRNGRPFWREQYADVRINEELPAGTFDQARWNDIPIPK*
Ga0070683_10005142313300005329Corn RhizosphereDTRVQNYKEIEGFLIPTEFLVTRNGRPIWREEYANVRVNEPIPAGAFDQAVWNDIPIPQ*
Ga0070690_10089157213300005330Switchgrass RhizosphereGERTMVSDIRVRDYKEIDGFEIPTEFLVLRNGRPVWREQYADVRINGEFPAGTFDQARWNDIPIPQ*
Ga0070709_1011446123300005434Corn, Switchgrass And Miscanthus RhizosphereVQDYKEIQGFEIPTEFLVVRNGKPFWREQYADVRINDEFPAGTFDQARWNDIPIPK*
Ga0070714_10087798723300005435Agricultural SoilQLWVDRGQLRLVRFIQTQKVGDRTTVSDIRVQGYKDIGGFDVPTEFLVIRNGRPVFREEYANVRVDTEFPPGTFDQARWNDIPIPK*
Ga0070708_10012821713300005445Corn, Switchgrass And Miscanthus RhizosphereRNIVSDIRVLNYKEIQGFDIPTEFLIIRNGRPFWREQYADVRINEELPAGTFDQARWNDIPIPK*
Ga0066686_1067034713300005446SoilMNVSDIRVLNYKEIEGFEVPTEFLVLRNGRPFWREQYADVRINEDFPPGTFDQARWNDIPIPK*
Ga0066689_1014207133300005447SoilMWVDRDHLRLVRFVQRSRAGERNIVSDIRVLNYKEIQGFDIPTEFLIIRNGRPFWREQYADVRINEQLPAGTFDQARWNDIPIPK*
Ga0070662_10147215513300005457Corn RhizosphereKAGDTTSNQMWVDRDNLRLVRFIQSQKVGNRTMVSDTRVSNYKEIDGFEIPTEFLVLRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ*
Ga0070699_10196112313300005518Corn, Switchgrass And Miscanthus RhizosphereRSKMGERTIVSDIRVRNYKEIQGFEVPTEFLVLRNGRPFWREQYADVRVNEEFVVGTFDQAKWYDIPIPK*
Ga0070695_10017263413300005545Corn, Switchgrass And Miscanthus RhizosphereAEERTIVSDYRVQNYKEIGGFQVPTEFLVLRNGRPVWREQYSDVHINEEIPAGAFDQARWNDVPIPQ*
Ga0070695_10188766713300005545Corn, Switchgrass And Miscanthus RhizosphereKVGNRTMVSDTRVSNYKEIDGFEIPTEFLVLRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ*
Ga0070693_10023276213300005547Corn, Switchgrass And Miscanthus RhizosphereVDRDNLRLVRLIQSQKVGDRTMVSDTRVLNYKEIEGFDVPTEFLVLRNGRPFWREQYADVRINEEFPAGTFDQARWNDIPIPK*
Ga0070664_10152225613300005564Corn RhizosphereTLSNQYWVDRDNLRLVRLIQSQKVGDRTMVSDTRVLNYKEIEGFDVPTEFLVLRNGRPFWREQYADVRINEEFPAGTFDQARWNDIPIPK*
Ga0068854_10214479423300005578Corn RhizosphereSNQMWVDRGQLRLVRFIQTQKVGDRTTVSDIRVQGYKDIGGFDVPTEFLVIRNGRPVFREEYANVRVNDEFPPGTFDQARWNDIPIPK*
Ga0066652_10040469223300006046SoilTLVSDIRVQNYKDIDGFEIPTEFLFIRNGKPVWREQYADVRINDDFPAGTFDQARWNDIPIPK*
Ga0066659_1142953613300006797SoilKASDRTMISDIRVQDYKEIQGFEIPTEFLVVRNGKPFWREQYADVRINDEFPPGTFDQARWNDIPIPK*
Ga0075436_10036769313300006914Populus RhizosphereSNQFWVDKDNLRLLRFIQRAKAGDRTIVSDMRVKSYKEIEGFDIPTEFLVLRNGRPVWREEYADVRINEEFPAGTFDQARWNDIPIPKG*
Ga0079219_1037236123300006954Agricultural SoilDNLRLLRFIQRAKAGDRTIVSDMRVKSYKEIEGYDIPTEFLVLRNGRPVWREEYADVRINEEFPAGTFDQARWNDIPIPKG*
Ga0075435_10109604313300007076Populus RhizosphereVQNYKEIEGFDIPTEFLVIRNGKPVWREQYADVKINEEFPAGTFDQARWYDIPIPKG*
Ga0104326_12883223300007740SoilVVSDIRVENYKEIQGFQIPTEFLVIRNGRPVWREQYANVRINEELPPGTFDQALWKDIPIPQ*
Ga0099792_1122159613300009143Vadose Zone SoilRDELRLVRFIQRQKAGERTIVSDNRVLNYKEMGGFSVPTEFLVIRNGRPVWREQYADVRINEDFPPGTFDQARWNDIPIPK*
Ga0105242_1028718023300009176Miscanthus RhizosphereQSQKAGDRTMVSDTRVKGYKEMGGFEVPTEFLVLRNGRPYWREEYADVRLNETFPAGTFDQARWNDIPIPQ*
Ga0105242_1176325013300009176Miscanthus RhizosphereTSNQMWVDRDRLRLVRFIQSQKAGDRTMVSDTRVKGYKEIEGFEVPTEFLVIRNGRPYWREEYADVRVNETFPAGTFDQARWNDIPIPK*
Ga0126309_1007429913300010039Serpentine SoilAGDYTTTQAWIDKEHLRLVRFIQRSKSGDRTMISDIRVRNYKEIQGFEVPTEFLTFRNGRPVWREQYADVRVNEEFPNGTFDQAKWYDIPIPQ*
Ga0126308_1103914623300010040Serpentine SoilEKRGERTIVSDIRVTNYKEIEGFDLPTEFLVLRNGRPFWREQYADVRVNEELPAGTFDQARWNDIPIPK*
Ga0134126_1196686423300010396Terrestrial SoilLVRFIQSSKAGERTIVSDIRVLNYKEIQGFDIPTEFLIIRNGRPFWREQYADVRINEELPAGTFDQARWNDIPIPK*
Ga0134122_1005914113300010400Terrestrial SoilLRLVRFIQSQKVGNRTMVSDTRVSNYKEIDGFEIPTEFLVLRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ*
Ga0134122_1121891613300010400Terrestrial SoilDHLRLVRFIQSQKVGNRTMVSDTRVSNYKEIEGFEIPTEFLVIRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ*
Ga0134123_1004776613300010403Terrestrial SoilTRVSNYKEIEGFEIPTGFLVIRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ*
Ga0137438_108597123300011431SoilQLWVDRDQLRLVRFIQSQKVGDRTTVSDIRVKGYKEIGGFDVPTEFLVIRNGRPVWREEYADVRINTDFPAGTFDQATWNDIPIPK*
Ga0120163_109148623300012003PermafrostPVSDIRVKGYKEIGGFDVPTEFLVIRNGRPVWREEYADVRINTDFPAGTFDQARWNDIPIPE*
Ga0137382_1045397223300012200Vadose Zone SoilMWVDRDYLRLVRFIQSSKIGDRTMLSDIRVLSYKEIGGFDVPTEFLVIRNGRPVWREQYADVRINENFPPGTFDQATWNAIPIPK*
Ga0137365_1086835613300012201Vadose Zone SoilTSNQMWVDRDYLRLVRFIQSSKIGDRTMLSDIRVLGYKEIGGFDVPTEFLVIRNGRPVWREQYDDVRINENFPPGTFDQATWNAIPIPK*
Ga0137376_1001219653300012208Vadose Zone SoilDREHLRLVRFIQTSRAGDRTMISDIRVQDYKEIQGFEIPTEFLVVRNGKPFWREQYADVRINDEFQPGTFDQARWNDIPIPK*
Ga0137376_1155309813300012208Vadose Zone SoilIVSDMRVKSYKEIEGFDIPTEFLVIRNGRPVWREEYANVRINDEFPAGTFDQARWNDISIPKG*
Ga0137377_1089471623300012211Vadose Zone SoilRVLNYKEIEGFEVPTEFLVLRNGRPFWREQYADVRINEDFPPGTFDQARWNDIPIPK*
Ga0150985_10428967023300012212Avena Fatua RhizosphereDTTANQMWVDRDHLRLVRFIQTQKAGDRTMVSDIRVRNYKEIEGFDIPTEFLVLRNGRPVWREQYADVHINGEFPAGTFDQARWNDIPIPQ*
Ga0137370_1088299123300012285Vadose Zone SoilFIQRSKAGERTMISDIRVSGYKEIQGFEVPTEFLVLRNGRPVWREVYADVRVNEEFPPGTFDQAKWYDIPIPK*
Ga0157288_1021685313300012901SoilGDIRIKGYKEMEGFEVPTEFLELRNGRPSWREEYADVRVNETFPAGTFDQARWNDIPIPR
Ga0137410_1094801023300012944Vadose Zone SoilQMWVDRSELRLVRFIQSQKAGDRTMVSDIRVLNYKEMSGFDVPTEFLVLRNGRPVWREQYADVRINEDFPPGTFDQARWNDIPIPKL*
Ga0164298_1164245113300012955SoilIQAQKTGDRTIVSDIHVSNYKEIQGFDVPTEFVVLRNGKPVWREQYADVRINDEFPVGTFDQARWNDIPIPKQ*
Ga0157374_1011867213300013296Miscanthus RhizosphereIVSDTRVQNYKDIQGFQIPTEFLVTRNGRPIWREEYANVRVNEPIPAGTFDQAVWNDIPIPQ*
Ga0157378_1053715923300013297Miscanthus RhizosphereSDIRVRDYKEIDGFEIPTEFLVLRNGRTVWREQYADVRINGEFPAGTFDQARWNDIPIPQ
Ga0157378_1079585413300013297Miscanthus RhizosphereTQKVGDRTTVSDIRVQGYKDIGGFDVPTEFLVIRNGRPVFREEYANVRVNDEFPPGTFDQARWNDIPIPK*
Ga0120127_1000035973300013503PermafrostRVANYKDIQGYQIPTEFLVIRNGRPVWREQYANVRINEDLPAGTFDQALWKDIPIPQ*
Ga0120181_100170033300013766PermafrostVISDIQVGGYKDIQGYQVPTEFLVIRNGRPVLREQYANVRINEEFPAGTFDQALWKDIPIPQ*
Ga0120181_101590123300013766PermafrostIRVENYKEIQGFQIPTEFLVIRNGRPVWREQYANVRINEELPPGTFDQALWKDIPIPQ*
Ga0120181_104692023300013766PermafrostFIQRGKSGERPIISDYRVETYKDIQGYQIPTEFLVIRNGRPVWREQYANVRINEEFPAGTFDQALWKDIPIPQ*
Ga0120155_101228313300013768PermafrostVRIHPARKGGDPTIVSDYRVQNYEEIQGYQIPTEFLVIRNGRPVWRERYANVRINEEFPAGTFDQARWKEIPIPE*
Ga0120158_1006203033300013772PermafrostRTIVSDYRVQSYKDIQGYQIATEFLVIRSGRPVWREQYANVRINEEFPAGTFNQATWKEIPIPQ*
Ga0120149_106132523300014058PermafrostDRVLTYKDIQGFQIPTEFLVIRNGRPVWREEYANVRINEEFPAGTFDQALWKDIPIPQ*
Ga0120170_110894413300014823PermafrostADRPIVSDYRVLSYKEIQGYQVPTEFLVIRNGRPAWREVYANIRVNEEFPAGTFDQALWKDIPIPQ*
Ga0120171_110358213300014827PermafrostLWVDRDQLRLVRFIQSQKAGERTTVSDIRVQGYKEIGGFDVPTEFLVIRNGRPVWREEYADVRINTDFPAGTFDQARWNDIPIPE*
Ga0137411_136486863300015052Vadose Zone SoilMLSDIRVLGYKEIGGFDVPTEFLVLRNGRPFWREQYADVRINENFPPGTFDQATWNAIPIPK*
Ga0167656_103864213300015076Glacier Forefield SoilFIQRGKGTERPMVSDIRVGGYKEIQGYQIPTEFLVIRNGRPVWREQYANVRINEDLPAGTFDQALWKDIPIPK*
Ga0167657_102711223300015079Glacier Forefield SoilVDRMLLLRFIQRGKSGDRRMISDYRVQGYKDIQGYHIPTEFLVIRNGRPVWREEYANVRINEEFPAGTFDQALWKDIPIPQ*
Ga0167655_105031623300015086Glacier Forefield SoilWVDADRLLLLRFIQRGKSGERTIVSDYRVQTYKEIQGYQIPTEFLVIRNGRPVWREQYANVRINEEFPAGTFDQARWKEIPIPQ*
Ga0167652_102788723300015164Glacier Forefield SoilVVSDIRVANYKEIQGYQIPTEFLVVRNGRPVWREQYENVRINETLPAGTFDQALWKDIPIPQ*
Ga0167651_110840523300015190Glacier Forefield SoilRSGSGDHTMVSDHRILNYKDIQGFQVPTEFLVIRNGRPFWREQYADIRVNEEFPPNTFDQAKWYDIPIPK*
Ga0132258_1070957113300015371Arabidopsis RhizosphereRVKGYKEMGGFEVPTEFLVLRNGRPYWREEYADVRLNETFPAGTFDQARWNDIPIPQ*
Ga0184619_1041465223300018061Groundwater SedimentMVSDIRVQNYKDIGGFQVPTEFLVIRNGRPVWREQYADVRVNQEFPPGTFDQARWNDIPIPQ
Ga0184619_1042595813300018061Groundwater SedimentDIRVQNYKDIGGFQVPTEFLVIRNGRPVWREQYADVRVNQEFPPGTFDQARWNDIPIPQ
Ga0184609_1028890813300018076Groundwater SedimentTVSDIRVQAYKDIQGFEIPTEFLVLRNGRPVWREQYADIRVNEDFPPGTFDQAKWYDIPIPTSK
Ga0066662_1136542633300018468Grasslands SoilDRDHLRLVRFVQRSRAGERNIVSDIRVLNYKEIQGFDIPTEFLIIRNGRPFWREQYADVRINEQLPAGTFDQARWNDIPIPK
Ga0193722_102464713300019877SoilTSNQMWVDRAQLRLVRFIQTQKVGDRTTVSDIRVQGYKEIGGFDVPTEFLVIRNGRPVWREEYANVRINADFPPGTFDQATWNDIPIPK
Ga0193715_101915813300019878SoilVRFIQSSKVGDRTMLSDIRVLGYKEIGGFDVPTEFLVLRNGRPFWREQYADVRINENFPPGTFDQATWNEIPIPK
Ga0193735_100502443300020006SoilRDQLRLVRFIQSQKVGERTMVSDNRVQGYKDIGGFDVPTEFLVIRNGRPVWREEYANVRVNPEFPPGTFDQARWNDIPIPK
Ga0193721_114504423300020018SoilMWVDRDHLRLVRFIQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0193733_113205713300020022SoilVDRDHLRLVRFIQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPVGTFDQAKWYDIPIPN
Ga0193745_106999313300020059SoilRSRAGDRTMVSDIRVSGYKEIQGFEVPTEFLVLRNGRPVWREVYADVRVNEEFPPNTFDQAKWYDIPIPK
Ga0193745_113433723300020059SoilRSKAGDRTMVSDIRVSGYKEIQGFEVPTEFLVLRNGRPVWREVYADVRVNDEFPPNTFDQAKWYDIPIPK
Ga0210382_1040042823300021080Groundwater SedimentRVRNYKEIQGFEVPTEFLVIRNGRPFWREQYADMRVNEEFPTGTFDQAKWYDIPIPVK
Ga0193709_102629313300021411SoilTTVSDIRVQGYKEIGGFDVPTEFLVIRNGRPVWREEYANVRINADFPPGTFDQATWNDIPIPK
Ga0222622_1041915623300022756Groundwater SedimentSDIRVSGYKEIQGFEVPTEFLVLRNGRPVWREVYADVRVNDEFPPNTFDQAKWYDIPIPK
Ga0208850_1000026653300025457Arctic Peat SoilTTSNQLWVDRDQLRLVRFIQSQKVGERTTVSDIHVQGYKEIGGFDVPTEFLLIRNGRPVWREEYADVRINADFPPGTFDQARWNDIPIPK
Ga0207682_1046410723300025893Miscanthus RhizosphereGAKAGDTTSNQMWVDRDHLRLVRFIQSQKVGNRTMVSDTRVSNYKEIEGFEIPTEFLVIRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ
Ga0207654_1044417023300025911Corn RhizosphereLRAKAGDRTIVSDMRVQNYKEIEGFDIPTEFMVIRNGKPVWREQYADVKINEEFPAGTFDQARWYDIPIPKG
Ga0207664_1080062523300025929Agricultural SoilQLWVDRGQLRLVRFIQTQKVGDRTTVSDIRVQGYKDIGGFDVPTEFLVIRNGRPVFREEYANVRVDTEFPPGTFDQARWNDIPIPK
Ga0207706_1152834923300025933Corn RhizosphereVRFIQSQKAGDRTMVSDTRVKGYKEIEGFEVPTEFLVIRNGRPYWREEYADVRVNETFPAGTFDQARWNDIPIPK
Ga0207686_1135622813300025934Miscanthus RhizosphereQKAGDRTMVSDTRVKGYKEIEGFEVPTEFLVIRNGRPYWREEYADVRVNETFPAGTFDQARWNDIPIPK
Ga0207640_1030458213300025981Corn RhizosphereSNQMWVDRGQLRLVRFIQTQKVGDRTTVSDIRVQGYKDIGGFDVPTEFLVIRNGRPVFREEYANVRVNDEFPPGTFDQARWNDIPIPK
Ga0207639_1197901813300026041Corn RhizosphereTMVSDTRVKGYKEMGGFEVPTEFLVLRNGRPYWREEYADVRLNETFPAGTFDQARWNDIPIPQ
Ga0209690_108476523300026524SoilQAQKTGKGINVSDIRVLNYKEIEGFEVPTEFLVLRNGRPFWREQYADVRINEDFPPGTFDQARWNDIPIPK
Ga0209219_116150523300027565Forest SoilDIRVQGYKEIGGFDVPTEFLVIRNGRPVWREQYADVRINENFPPGTFDQATWNAIPIPK
Ga0209074_1001185313300027787Agricultural SoilFWVDKDNLRLLRFIQRAKAGDRTIVSDMRVKSYKEIEGYDIPTEFLVLRNGRPVWREEYADVRINEEFPAGTFDQARWNDIPIPKG
Ga0307280_1036194413300028768SoilTIVSDTRVQNYKDIQGFQIPTEFLVTRNGRPIWREEYANVRVNEPIPAGAFDQAVWNDIPIPQ
Ga0307299_1018904813300028793SoilTPNQMWVDRDHLRLVRFIQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0307299_1026179413300028793SoilQRSKAGDRTTVSDIRVGGYKEIQGFEVPTEFLVLRNGRPVWREVYADVRVNEEFPPNTFDQAKWYDIPIPK
Ga0307284_1016104213300028799SoilWVDAERLVLLRFIQRSKSGERTIVSDTRVQNYKEIQGFQIPTEFLVTRNGRPIWREEYANVRVNEPIPAGTFDQAVWNDVPIPQ
Ga0307305_1019890823300028807SoilTSNQMWVDRDHLRLVRFIQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0307305_1026315513300028807SoilKTGDRTMTSDIRIKSYKEIGGFDVPTEFLVIRNGRPFWREEYADVRINAEFPPGTFDQATWHDIPIPKQ
Ga0307305_1041275623300028807SoilIQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0307314_1008422013300028872SoilMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0308187_1049134623300031114SoilQRNKSGDRTIVSDMRIQNYKEIQGFEVPTEFLFLRNGRPVWREQYADVKVNEEFPTGTFDQAKWYDIPIPN
Ga0170824_12011889223300031231Forest SoilVDAERLVLLRFIQRNKAGERTIISDTRVQNYKDIQGFQIPTEFLVTRNGRPIWREEYANVRVNEPIPAGTFDQAVWNDIPIPQ
Ga0310888_1089477713300031538SoilIQSQKVGNRTMVSDTRVSNYKEIEGFEIPTEFLVIRNGRPYWREQYADVRINEEFPAGTFDQARWNDIPIPQ
Ga0307470_1164098723300032174Hardwood Forest SoilSRVQEYKEIQGFEIPTEFLVLRNGKPFWREQYADVRINDDFPPGTFDQARWNDIPIPK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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