Basic Information | |
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Family ID | F089526 |
Family Type | Metagenome |
Number of Sequences | 109 |
Average Sequence Length | 47 residues |
Representative Sequence | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEK |
Number of Associated Samples | 51 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 43.12 % |
% of genes near scaffold ends (potentially truncated) | 24.77 % |
% of genes from short scaffolds (< 2000 bps) | 84.40 % |
Associated GOLD sequencing projects | 46 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.67 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (66.055 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (40.367 % of family members) |
Environment Ontology (ENVO) | Unclassified (81.651 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (77.982 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 45.33% β-sheet: 0.00% Coil/Unstructured: 54.67% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.67 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 108 Family Scaffolds |
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PF00124 | Photo_RC | 17.59 |
PF00504 | Chloroa_b-bind | 8.33 |
PF07681 | DoxX | 6.48 |
PF02945 | Endonuclease_7 | 5.56 |
PF05315 | ICEA | 3.70 |
PF05869 | Dam | 2.78 |
PF13392 | HNH_3 | 1.85 |
PF02867 | Ribonuc_red_lgC | 0.93 |
PF01503 | PRA-PH | 0.93 |
COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
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COG2259 | Uncharacterized membrane protein YphA, DoxX/SURF4 family | Function unknown [S] | 6.48 |
COG4270 | Uncharacterized membrane protein | Function unknown [S] | 6.48 |
COG0209 | Ribonucleotide reductase alpha subunit | Nucleotide transport and metabolism [F] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 66.06 % |
All Organisms | root | All Organisms | 33.94 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2189573028|GS313G0146KB_1112079340936 | Not Available | 796 | Open in IMG/M |
3300000116|DelMOSpr2010_c10073146 | Not Available | 1385 | Open in IMG/M |
3300001450|JGI24006J15134_10019890 | Not Available | 3105 | Open in IMG/M |
3300001450|JGI24006J15134_10027028 | Not Available | 2563 | Open in IMG/M |
3300001450|JGI24006J15134_10090170 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 1124 | Open in IMG/M |
3300001450|JGI24006J15134_10092780 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 1101 | Open in IMG/M |
3300002231|KVRMV2_101475387 | Not Available | 783 | Open in IMG/M |
3300004448|Ga0065861_1117663 | All Organisms → Viruses → Predicted Viral | 1354 | Open in IMG/M |
3300004448|Ga0065861_1218165 | Not Available | 524 | Open in IMG/M |
3300004457|Ga0066224_1190612 | Not Available | 547 | Open in IMG/M |
3300004460|Ga0066222_1061359 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 758 | Open in IMG/M |
3300004461|Ga0066223_1103581 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 541 | Open in IMG/M |
3300005239|Ga0073579_1017314 | All Organisms → Viruses → Predicted Viral | 1907 | Open in IMG/M |
3300005239|Ga0073579_1091462 | Not Available | 1557 | Open in IMG/M |
3300005239|Ga0073579_1165475 | Not Available | 968 | Open in IMG/M |
3300005239|Ga0073579_1190873 | Not Available | 86332 | Open in IMG/M |
3300005239|Ga0073579_1190873 | Not Available | 86332 | Open in IMG/M |
3300005239|Ga0073579_1325411 | Not Available | 836 | Open in IMG/M |
3300006024|Ga0066371_10292795 | Not Available | 511 | Open in IMG/M |
3300006735|Ga0098038_1240599 | Not Available | 574 | Open in IMG/M |
3300006752|Ga0098048_1093690 | Not Available | 912 | Open in IMG/M |
3300006752|Ga0098048_1208318 | Not Available | 576 | Open in IMG/M |
3300006789|Ga0098054_1112975 | All Organisms → Viruses → Predicted Viral | 1013 | Open in IMG/M |
3300006793|Ga0098055_1010432 | All Organisms → Viruses → Predicted Viral | 4195 | Open in IMG/M |
3300006793|Ga0098055_1027696 | Not Available | 2368 | Open in IMG/M |
3300006793|Ga0098055_1037905 | All Organisms → Viruses | 1978 | Open in IMG/M |
3300006793|Ga0098055_1105438 | Not Available | 1099 | Open in IMG/M |
3300006793|Ga0098055_1106276 | Not Available | 1094 | Open in IMG/M |
3300006793|Ga0098055_1132026 | Not Available | 967 | Open in IMG/M |
3300006793|Ga0098055_1181997 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae | 802 | Open in IMG/M |
3300006793|Ga0098055_1206856 | Not Available | 744 | Open in IMG/M |
3300006793|Ga0098055_1212116 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ROS8604 | 734 | Open in IMG/M |
3300006793|Ga0098055_1385900 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 519 | Open in IMG/M |
3300006793|Ga0098055_1397189 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 510 | Open in IMG/M |
3300006919|Ga0070746_10464227 | Not Available | 560 | Open in IMG/M |
3300006921|Ga0098060_1102785 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 809 | Open in IMG/M |
3300006921|Ga0098060_1136545 | Not Available | 683 | Open in IMG/M |
3300006921|Ga0098060_1174406 | Not Available | 592 | Open in IMG/M |
3300006924|Ga0098051_1023090 | All Organisms → Viruses → Predicted Viral | 1790 | Open in IMG/M |
3300006925|Ga0098050_1074156 | Not Available | 879 | Open in IMG/M |
3300006925|Ga0098050_1087867 | Not Available | 799 | Open in IMG/M |
3300006925|Ga0098050_1099712 | All Organisms → Viruses | 743 | Open in IMG/M |
3300006925|Ga0098050_1153295 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1 | 580 | Open in IMG/M |
3300006925|Ga0098050_1173256 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 541 | Open in IMG/M |
3300007647|Ga0102855_1188409 | Not Available | 551 | Open in IMG/M |
3300007863|Ga0105744_1199566 | Not Available | 503 | Open in IMG/M |
3300007954|Ga0105739_1121571 | Not Available | 608 | Open in IMG/M |
3300009058|Ga0102854_1042372 | All Organisms → Viruses | 1310 | Open in IMG/M |
3300009529|Ga0114919_11069581 | Not Available | 542 | Open in IMG/M |
3300009593|Ga0115011_10202220 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 1468 | Open in IMG/M |
3300010150|Ga0098056_1198866 | Not Available | 670 | Open in IMG/M |
3300017708|Ga0181369_1032621 | Not Available | 1221 | Open in IMG/M |
3300017708|Ga0181369_1087585 | Not Available | 657 | Open in IMG/M |
3300017725|Ga0181398_1000040 | Not Available | 34051 | Open in IMG/M |
3300017740|Ga0181418_1145479 | Not Available | 570 | Open in IMG/M |
3300017741|Ga0181421_1146400 | Not Available | 611 | Open in IMG/M |
3300017744|Ga0181397_1008947 | Not Available | 3126 | Open in IMG/M |
3300017744|Ga0181397_1013839 | All Organisms → Viruses → Predicted Viral | 2440 | Open in IMG/M |
3300017744|Ga0181397_1035157 | Not Available | 1425 | Open in IMG/M |
3300017757|Ga0181420_1066088 | Not Available | 1143 | Open in IMG/M |
3300017757|Ga0181420_1210710 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 561 | Open in IMG/M |
3300017762|Ga0181422_1123158 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1 | 803 | Open in IMG/M |
3300017762|Ga0181422_1129643 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 779 | Open in IMG/M |
3300017762|Ga0181422_1191814 | Not Available | 618 | Open in IMG/M |
3300017764|Ga0181385_1237120 | Not Available | 548 | Open in IMG/M |
3300017767|Ga0181406_1236720 | Not Available | 537 | Open in IMG/M |
3300017776|Ga0181394_1041868 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1568 | Open in IMG/M |
3300017781|Ga0181423_1280877 | Not Available | 617 | Open in IMG/M |
3300017781|Ga0181423_1346817 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 541 | Open in IMG/M |
3300020417|Ga0211528_10057073 | Not Available | 1678 | Open in IMG/M |
3300020451|Ga0211473_10613279 | Not Available | 550 | Open in IMG/M |
3300021185|Ga0206682_10319092 | Not Available | 673 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10007993 | Not Available | 8047 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10029623 | Not Available | 3094 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10034354 | Not Available | 2783 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10082409 | Not Available | 1516 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10100879 | Not Available | 1318 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10107962 | Not Available | 1257 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10118964 | Not Available | 1175 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10156371 | Not Available | 973 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10186463 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Omegavirus → Omegavirus littlee | 862 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10206589 | Not Available | 803 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10209280 | Not Available | 795 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10220270 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Llyrvirus → Synechococcus virus SSKS1 | 768 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10245667 | Not Available | 710 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10276646 | Not Available | 652 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10309584 | Not Available | 602 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10387374 | Not Available | 512 | Open in IMG/M |
(restricted) 3300024518|Ga0255048_10073399 | All Organisms → Viruses → Predicted Viral | 1701 | Open in IMG/M |
(restricted) 3300024518|Ga0255048_10624334 | All Organisms → Viruses | 521 | Open in IMG/M |
(restricted) 3300024520|Ga0255047_10244534 | Not Available | 911 | Open in IMG/M |
3300025085|Ga0208792_1019663 | Not Available | 1416 | Open in IMG/M |
3300025085|Ga0208792_1069789 | Not Available | 637 | Open in IMG/M |
3300025108|Ga0208793_1010662 | All Organisms → Viruses → Predicted Viral | 3626 | Open in IMG/M |
3300025108|Ga0208793_1015898 | All Organisms → cellular organisms → Bacteria | 2773 | Open in IMG/M |
3300025108|Ga0208793_1038432 | Not Available | 1541 | Open in IMG/M |
3300025108|Ga0208793_1138434 | All Organisms → Viruses | 652 | Open in IMG/M |
3300025108|Ga0208793_1156828 | Not Available | 598 | Open in IMG/M |
3300025168|Ga0209337_1025161 | Not Available | 3387 | Open in IMG/M |
3300025168|Ga0209337_1161900 | Not Available | 955 | Open in IMG/M |
3300025668|Ga0209251_1173083 | All Organisms → Viruses | 544 | Open in IMG/M |
3300025879|Ga0209555_10133491 | Not Available | 1043 | Open in IMG/M |
3300027906|Ga0209404_10074553 | Not Available | 1963 | Open in IMG/M |
3300027906|Ga0209404_10611004 | Not Available | 730 | Open in IMG/M |
3300028194|Ga0257106_1068401 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1312 | Open in IMG/M |
3300028197|Ga0257110_1002589 | Not Available | 8415 | Open in IMG/M |
3300032073|Ga0315315_10148630 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2185 | Open in IMG/M |
3300032073|Ga0315315_10290325 | All Organisms → Viruses → Predicted Viral | 1524 | Open in IMG/M |
3300032073|Ga0315315_10467933 | Not Available | 1169 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 40.37% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 17.43% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 14.68% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 7.34% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 4.59% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 3.67% |
Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 1.83% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 1.83% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 1.83% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 1.83% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 0.92% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 0.92% |
Marine Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine | 0.92% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.92% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 0.92% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2189573028 | Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15m | Environmental | Open in IMG/M |
3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300002231 | Marine sediment microbial communities from Santorini caldera mats, Greece - red mat | Environmental | Open in IMG/M |
3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004457 | Marine viral communities from Newfoundland, Canada MC-1 | Environmental | Open in IMG/M |
3300004460 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004461 | Marine viral communities from Newfoundland, Canada BC-2 | Environmental | Open in IMG/M |
3300005239 | Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine | Environmental | Open in IMG/M |
3300006024 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
3300007647 | Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 | Environmental | Open in IMG/M |
3300007863 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um | Environmental | Open in IMG/M |
3300007954 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2um | Environmental | Open in IMG/M |
3300009058 | Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 | Environmental | Open in IMG/M |
3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
3300010150 | Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG | Environmental | Open in IMG/M |
3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
3300017725 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29 | Environmental | Open in IMG/M |
3300017740 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13 | Environmental | Open in IMG/M |
3300017741 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19 | Environmental | Open in IMG/M |
3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017762 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18 | Environmental | Open in IMG/M |
3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
3300020451 | Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996) | Environmental | Open in IMG/M |
3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
3300024518 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2 | Environmental | Open in IMG/M |
3300024520 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1 | Environmental | Open in IMG/M |
3300025085 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025108 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
3300025668 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025879 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes) | Environmental | Open in IMG/M |
3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
3300028194 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m | Environmental | Open in IMG/M |
3300028197 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m | Environmental | Open in IMG/M |
3300032073 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GS313G0146KB_00627460 | 2189573028 | Marine Estuarine | MTLNNEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEKK |
DelMOSpr2010_100731462 | 3300000116 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSITNPRYNDYEVILQLLSETKEEK* |
JGI24006J15134_100198902 | 3300001450 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQVLSDIKEEK* |
JGI24006J15134_100270285 | 3300001450 | Marine | MDLNREQLNDVMHAVSFYMHRHVSIQNPRYNDYEVILQVLNDIKKEK* |
JGI24006J15134_100901702 | 3300001450 | Marine | MTLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSDSEVKK* |
JGI24006J15134_100927802 | 3300001450 | Marine | MTLNNEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKAKK* |
KVRMV2_1014753872 | 3300002231 | Marine Sediment | MNFNDEQLRDIRAAVKYYMQRHVSINNPRYNDYEVILQLLTKSIKEHK* |
Ga0065861_11176633 | 3300004448 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSINNPRYNDYEVILQLLSETKEEK* |
Ga0065861_12181651 | 3300004448 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSEHKKEAK* |
Ga0066224_11906122 | 3300004457 | Marine | MNLNKEQLNDVRHAMAYYMYHHVSISNPRYNDYEVILQLLSELKEEK* |
Ga0066222_10613593 | 3300004460 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSELKEEK* |
Ga0066223_11035812 | 3300004461 | Marine | MNLNKEQLNDVRHAVAYYMYHHISVNNPRYNDYEVILQLLSETKEEK* |
Ga0073579_10173142 | 3300005239 | Marine | MNLNKEQLNDLRYVLAHYMQNYVSITNPRYNDYEVILQLLSETKEEK* |
Ga0073579_10914622 | 3300005239 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSVNNPRYNEYEVILQLLSDTKEETK* |
Ga0073579_11654751 | 3300005239 | Marine | KEQLNDVKHAVAYYMYHHVSVNNPRYNEYEVILQLLSETKEEK*LQ* |
Ga0073579_119087385 | 3300005239 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSVNNPRYNDYEVILQLLSETREEK* |
Ga0073579_119087387 | 3300005239 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLNEYKDESK* |
Ga0073579_13254111 | 3300005239 | Marine | MNDVRHAVAYYMYHHVSVNNPRYNEYEVILQLLNGTNEETK* |
Ga0066371_102927952 | 3300006024 | Marine | MELKQEQLNDVKAAVRYYQQHHISPTNPRYKDYEVILQLLEKDKDE* |
Ga0098038_12405992 | 3300006735 | Marine | MDDLSLEQLNDIRAAVTHYQHHQVSISNPRYKDYEVILQLLEKRKE |
Ga0098048_10936901 | 3300006752 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEV |
Ga0098048_12083181 | 3300006752 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSELKEEKK* |
Ga0098054_11129754 | 3300006789 | Marine | MNLTKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0098055_10104327 | 3300006793 | Marine | MMNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSETKEEK* |
Ga0098055_10276968 | 3300006793 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0098055_10379053 | 3300006793 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSITNPRYNDYEVILQLLSELKEETK* |
Ga0098055_11054383 | 3300006793 | Marine | LLGSFNGPLIIMKLNKEQLNDVKHAVAYYMHHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0098055_11062762 | 3300006793 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEVK*LQ* |
Ga0098055_11320263 | 3300006793 | Marine | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK*LQ* |
Ga0098055_11819973 | 3300006793 | Marine | AFFNVMNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEAK* |
Ga0098055_12068563 | 3300006793 | Marine | CHKDYRQMNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEETK* |
Ga0098055_12121163 | 3300006793 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSEL |
Ga0098055_13859002 | 3300006793 | Marine | MNLTKEQLNDVRHAVAYYMYHHVSIQNPRYNDYEVILQLLTEYKNETL* |
Ga0098055_13971892 | 3300006793 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSELKEKK* |
Ga0070746_104642272 | 3300006919 | Aqueous | MKLTKEQLNDVQHAVAYYMYHHVSINNPRYNDYEVILQLLSDYKDTK* |
Ga0098060_11027853 | 3300006921 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSELKEDNDCNN* |
Ga0098060_11365453 | 3300006921 | Marine | MKLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0098060_11744062 | 3300006921 | Marine | MMNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSEYKAELNDCNN* |
Ga0098051_10230903 | 3300006924 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSETKEEK* |
Ga0098050_10741561 | 3300006925 | Marine | LLGSFNGPSIIMKLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0098050_10878671 | 3300006925 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSELK |
Ga0098050_10997122 | 3300006925 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEAK* |
Ga0098050_11532952 | 3300006925 | Marine | MALNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLL |
Ga0098050_11732562 | 3300006925 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK*L* |
Ga0102855_11884093 | 3300007647 | Estuarine | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKE |
Ga0105744_11995661 | 3300007863 | Estuary Water | MTLNKEQLTDLKHAVSYYMSQQVSIQNPRYNDYEVILQL |
Ga0105739_11215711 | 3300007954 | Estuary Water | MTLNKEQLNDVRHAVAYYMFHHVSISNPRYNDYEVILQL |
Ga0102854_10423723 | 3300009058 | Estuarine | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK* |
Ga0114919_110695812 | 3300009529 | Deep Subsurface | MNLNKEQLNDVRHAVAYYMYHHVSINNPRYQDYEVILQLLSDTKEETK* |
Ga0115011_102022201 | 3300009593 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYKDYEVILQL |
Ga0098056_11988662 | 3300010150 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSITNPRYNDYEVILQLLSELKEETK |
Ga0181369_10326214 | 3300017708 | Marine | KFFNAMNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSELKEDNDCNNE |
Ga0181369_10875852 | 3300017708 | Marine | MMNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK |
Ga0181398_100004037 | 3300017725 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSIQNPRYNDYEVILQLLSDTKEEAK |
Ga0181418_11454792 | 3300017740 | Seawater | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEKK |
Ga0181421_11464001 | 3300017741 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKATENDDSN |
Ga0181397_10089478 | 3300017744 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKGKENDDSD |
Ga0181397_10138392 | 3300017744 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEETK |
Ga0181397_10351575 | 3300017744 | Seawater | RAFFNAMNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKAEK |
Ga0181420_10660883 | 3300017757 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEE |
Ga0181420_12107102 | 3300017757 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSDTKEEK |
Ga0181422_11231583 | 3300017762 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSIQNPRYDDYEVILQLLNETKEETK |
Ga0181422_11296432 | 3300017762 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKGETK |
Ga0181422_11918142 | 3300017762 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSISNPRYSEYEAILQLLSETKATENDDSN |
Ga0181385_12371201 | 3300017764 | Seawater | MALTKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEETK |
Ga0181406_12367202 | 3300017767 | Seawater | MNFNKEQLNDVRHAVAYYMYHHVSIKNPRYNDYEVILQLLSETKGKENDDSNXRRR |
Ga0181394_10418683 | 3300017776 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSISNPRYSDYEAILQLLSETKATENDDSN |
Ga0181423_12808771 | 3300017781 | Seawater | TLNKEQLNDVKHAVAYYMYHHVSIHNPRYNDYEVILQLLSETKEEK |
Ga0181423_13468172 | 3300017781 | Seawater | MTLNNEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKAKK |
Ga0211528_100570732 | 3300020417 | Marine | MDLNQEQLNDVRAAVKFYQQHHISPTNPRYKEYEVILQLLEKYKDDQ |
Ga0211473_106132792 | 3300020451 | Marine | MNFNDEQLRDIRAAVKYYMQRHVSINNPRYNDYEVILQLLTKSIKEHK |
Ga0206682_103190923 | 3300021185 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK |
(restricted) Ga0233438_100079932 | 3300024255 | Seawater | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEETK |
(restricted) Ga0233438_100296236 | 3300024255 | Seawater | MGLTKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEKXP |
(restricted) Ga0233438_100343543 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSECNEQNDCNN |
(restricted) Ga0233438_100824093 | 3300024255 | Seawater | MDLTNEQLNDVRHAVAYYMYHHVSVKNPRYNDYEVILHLLSETKEETK |
(restricted) Ga0233438_101008792 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEKXLK |
(restricted) Ga0233438_101079621 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQL |
(restricted) Ga0233438_101189641 | 3300024255 | Seawater | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVIL |
(restricted) Ga0233438_101563712 | 3300024255 | Seawater | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLNELKGEEND |
(restricted) Ga0233438_101864633 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEETK |
(restricted) Ga0233438_102065893 | 3300024255 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKAKENDDSN |
(restricted) Ga0233438_102092802 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYDDYEVILQLLSETKEEK |
(restricted) Ga0233438_102202701 | 3300024255 | Seawater | MALTKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEETKXL |
(restricted) Ga0233438_102456672 | 3300024255 | Seawater | MKLTKEQLNDVKHAVAYYMYHHVSIQNPRYSDYEVILQLLSETKEEK |
(restricted) Ga0233438_102766462 | 3300024255 | Seawater | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYTDYEVILQLLSETKEEK |
(restricted) Ga0233438_103095843 | 3300024255 | Seawater | AVAYYMYHHVSISNPRYNDYEVILQLLSDTKEETQ |
(restricted) Ga0233438_103873742 | 3300024255 | Seawater | MALTKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEKXP |
(restricted) Ga0255048_100733993 | 3300024518 | Seawater | MNLTKEQLNDVKHAVAYYMYHHVSINNPRYNDYEVILQLLSETKEEK |
(restricted) Ga0255048_106243342 | 3300024518 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKGKENDDSN |
(restricted) Ga0255047_102445342 | 3300024520 | Seawater | MKLTNEQLNDVRHAVAYYMYHHVSVKNPRFNDYEVILQLLSETKE |
Ga0208792_10196631 | 3300025085 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSISNPRYNDYEVI |
Ga0208792_10697891 | 3300025085 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSE |
Ga0208793_10106624 | 3300025108 | Marine | MMNLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSETKEEK |
Ga0208793_10158981 | 3300025108 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSELKEKK |
Ga0208793_10384321 | 3300025108 | Marine | MALNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQLLSETKEEKXLQ |
Ga0208793_11384342 | 3300025108 | Marine | MNLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEEK |
Ga0208793_11568282 | 3300025108 | Marine | MKLNKEQLNDVKHAVAYYMHHHVSIQNPRYNDYEVILQLLSETKEEK |
Ga0209337_10251612 | 3300025168 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQVLSDIKEEK |
Ga0209337_11619002 | 3300025168 | Marine | MTLNKEQLNDVKHAVAYYMYHHVSITNPRYNDYEVILQVLSDIKKEK |
Ga0209251_11730832 | 3300025668 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEK |
Ga0209555_101334911 | 3300025879 | Marine | MALTKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKEEK |
Ga0209404_100745533 | 3300027906 | Marine | MNFNDEQLRDIRAAVKYYMQRHVSIKNPRYDDYEVILQLLSKSITEHK |
Ga0209404_106110042 | 3300027906 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVI |
Ga0257106_10684012 | 3300028194 | Marine | MNLNKEQLNDLRFVLAHYMQKNVSISNPRYKDYEVILQLLNETEVSK |
Ga0257110_10025892 | 3300028197 | Marine | MNLNKEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSEYKNETK |
Ga0315315_101486305 | 3300032073 | Seawater | MTLNKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEKK |
Ga0315315_102903254 | 3300032073 | Seawater | MNLSKEQLNDVKHAVAYYMYHHVSIQNPRYNDYEVILQLLSETKEETK |
Ga0315315_104679335 | 3300032073 | Seawater | KEQLNDVRHAVAYYMYHHVSISNPRYNDYEVILQLLSETKAEK |
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