Metagenome / Metatranscriptome Family F089517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	96 residues
Representative Sequence	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKRSVFAELKTKDHTIESAKEMIEALQKYVDKNDTTTTEEDN
Number of Associated Samples	76
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.12 %
% of genes near scaffold ends (potentially truncated)	34.86 %
% of genes from short scaffolds (< 2000 bps)	81.65 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.128 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (25.688 % of family members)
Environment Ontology (ENVO)	Unclassified (69.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (82.569 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.16% β-sheet: 11.90% Coil/Unstructured: 57.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13619	KTSC	10.09
PF14700	RPOL_N	6.42
PF16778	Phage_tail_APC	0.92
PF00476	DNA_pol_A	0.92
PF00589	Phage_integrase	0.92
PF01503	PRA-PH	0.92
PF00940	RNA_pol	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.92
COG5108	Mitochondrial DNA-directed RNA polymerase	Transcription [K]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.13 %
Viruses	superkingdom	All Organisms → Viruses	42.20 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.75 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.75 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.75 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.75 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.83 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	1.83 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Kajamvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus	0.92 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Synechococcus virus SRIP1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	0.92 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	52.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.94 %
Unclassified	root	N/A	3.67 %
Synechococcus phage S-RIP1	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1 → Synechococcus phage S-RIP1	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10050765	All Organisms → Viruses → Predicted Viral	1817	Open in IMG/M
3300000116\|DelMOSpr2010_c10067159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1475	Open in IMG/M
3300000116\|DelMOSpr2010_c10113466	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	993	Open in IMG/M
3300000117\|DelMOWin2010_c10123209	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	901	Open in IMG/M
3300001355\|JGI20158J14315_10202288	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	566	Open in IMG/M
3300001450\|JGI24006J15134_10091529	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300001460\|JGI24003J15210_10108148	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	781	Open in IMG/M
3300001935\|GOS2223_1004971	All Organisms → Viruses → Predicted Viral	1502	Open in IMG/M
3300001940\|GOS2222_1006306	All Organisms → Viruses → Predicted Viral	1807	Open in IMG/M
3300001947\|GOS2218_1044222	All Organisms → Viruses → Predicted Viral	3825	Open in IMG/M
3300004448\|Ga0065861_1039339	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1130	Open in IMG/M
3300004448\|Ga0065861_1039340	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004457\|Ga0066224_1004163	All Organisms → Viruses	929	Open in IMG/M
3300004461\|Ga0066223_1022311	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300004461\|Ga0066223_1022312	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	561	Open in IMG/M
3300005731\|Ga0076919_1065790	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	551	Open in IMG/M
3300005748\|Ga0076925_1036815	Not Available	964	Open in IMG/M
3300006752\|Ga0098048_1017862	All Organisms → Viruses	2404	Open in IMG/M
3300006789\|Ga0098054_1053726	All Organisms → Viruses → Predicted Viral	1539	Open in IMG/M
3300006793\|Ga0098055_1116082	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300006793\|Ga0098055_1133911	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300006793\|Ga0098055_1276381	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	629	Open in IMG/M
3300006793\|Ga0098055_1342462	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	556	Open in IMG/M
3300006921\|Ga0098060_1128733	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	708	Open in IMG/M
3300006924\|Ga0098051_1008565	All Organisms → Viruses → Predicted Viral	3171	Open in IMG/M
3300006924\|Ga0098051_1182743	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	550	Open in IMG/M
3300007555\|Ga0102817_1069799	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	768	Open in IMG/M
3300007718\|Ga0102852_1066435	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	693	Open in IMG/M
3300007863\|Ga0105744_1107438	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	690	Open in IMG/M
3300007953\|Ga0105738_1041366	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	726	Open in IMG/M
3300007992\|Ga0105748_10226159	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	782	Open in IMG/M
3300009026\|Ga0102829_1029498	All Organisms → Viruses → Predicted Viral	1596	Open in IMG/M
3300009058\|Ga0102854_1021463	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M
3300009498\|Ga0115568_10495592	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	520	Open in IMG/M
3300009512\|Ga0115003_10060163	All Organisms → Viruses → Predicted Viral	2387	Open in IMG/M
3300010149\|Ga0098049_1262258	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	524	Open in IMG/M
3300010150\|Ga0098056_1011509	Not Available	3233	Open in IMG/M
3300010150\|Ga0098056_1037621	All Organisms → Viruses → Predicted Viral	1691	Open in IMG/M
3300010150\|Ga0098056_1138877	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	822	Open in IMG/M
3300010150\|Ga0098056_1192467	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	682	Open in IMG/M
3300010392\|Ga0118731_113221494	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	647	Open in IMG/M
3300011252\|Ga0151674_1053113	All Organisms → Viruses → Predicted Viral	1314	Open in IMG/M
3300011258\|Ga0151677_1097159	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	696	Open in IMG/M
3300017708\|Ga0181369_1017856	All Organisms → Viruses → Predicted Viral	1749	Open in IMG/M
3300017709\|Ga0181387_1017780	All Organisms → Viruses → Predicted Viral	1377	Open in IMG/M
3300017709\|Ga0181387_1041114	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	914	Open in IMG/M
3300017709\|Ga0181387_1088425	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	630	Open in IMG/M
3300017714\|Ga0181412_1028435	All Organisms → Viruses → Predicted Viral	1516	Open in IMG/M
3300017714\|Ga0181412_1042599	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300017719\|Ga0181390_1009047	All Organisms → Viruses → Predicted Viral	3567	Open in IMG/M
3300017725\|Ga0181398_1003251	All Organisms → Viruses → Predicted Viral	4417	Open in IMG/M
3300017727\|Ga0181401_1035454	All Organisms → Viruses → Predicted Viral	1416	Open in IMG/M
3300017727\|Ga0181401_1038118	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300017728\|Ga0181419_1007389	All Organisms → Viruses → Predicted Viral	3333	Open in IMG/M
3300017728\|Ga0181419_1015929	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300017728\|Ga0181419_1020297	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300017728\|Ga0181419_1103986	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	698	Open in IMG/M
3300017735\|Ga0181431_1015923	All Organisms → Viruses → Predicted Viral	1768	Open in IMG/M
3300017735\|Ga0181431_1021606	All Organisms → Viruses → Predicted Viral	1498	Open in IMG/M
3300017735\|Ga0181431_1046000	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	990	Open in IMG/M
3300017740\|Ga0181418_1158452	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	542	Open in IMG/M
3300017752\|Ga0181400_1028094	All Organisms → Viruses → Predicted Viral	1823	Open in IMG/M
3300017757\|Ga0181420_1136722	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	737	Open in IMG/M
3300017757\|Ga0181420_1189986	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	600	Open in IMG/M
3300017762\|Ga0181422_1061963	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300017764\|Ga0181385_1026308	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300017773\|Ga0181386_1020164	All Organisms → Viruses → Predicted Viral	2224	Open in IMG/M
3300017773\|Ga0181386_1098233	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	914	Open in IMG/M
3300017776\|Ga0181394_1000953	All Organisms → Viruses	12624	Open in IMG/M
3300017782\|Ga0181380_1183287	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	706	Open in IMG/M
3300018682\|Ga0188851_1037092	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	519	Open in IMG/M
3300020310\|Ga0211515_1002711	All Organisms → Viruses → Predicted Viral	4858	Open in IMG/M
3300020347\|Ga0211504_1051070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1 → Synechococcus phage S-RIP1	986	Open in IMG/M
3300020352\|Ga0211505_1095420	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	710	Open in IMG/M
3300020431\|Ga0211554_10135106	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1226	Open in IMG/M
3300020431\|Ga0211554_10424647	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	614	Open in IMG/M
3300020459\|Ga0211514_10000119	Not Available	43371	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10054854	All Organisms → Viruses → Predicted Viral	1627	Open in IMG/M
3300024346\|Ga0244775_10533738	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	956	Open in IMG/M
3300025084\|Ga0208298_1004001	All Organisms → Viruses → Predicted Viral	4421	Open in IMG/M
3300025084\|Ga0208298_1006142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	3296	Open in IMG/M
3300025085\|Ga0208792_1000542	All Organisms → Viruses	14283	Open in IMG/M
3300025098\|Ga0208434_1090449	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	611	Open in IMG/M
3300025099\|Ga0208669_1048425	All Organisms → Viruses	979	Open in IMG/M
3300025108\|Ga0208793_1009329	All Organisms → Viruses → Predicted Viral	3972	Open in IMG/M
3300025108\|Ga0208793_1130037	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	681	Open in IMG/M
3300025120\|Ga0209535_1076080	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300025168\|Ga0209337_1192778	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	837	Open in IMG/M
3300025168\|Ga0209337_1339883	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	520	Open in IMG/M
3300025890\|Ga0209631_10261107	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	858	Open in IMG/M
3300028125\|Ga0256368_1070545	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	600	Open in IMG/M
3300029448\|Ga0183755_1002199	All Organisms → Viruses	10469	Open in IMG/M
3300029448\|Ga0183755_1022551	All Organisms → Viruses → Predicted Viral	2037	Open in IMG/M
3300031539\|Ga0307380_10766258	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	802	Open in IMG/M
3300031539\|Ga0307380_10917650	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	708	Open in IMG/M
3300031539\|Ga0307380_11114576	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	619	Open in IMG/M
3300031565\|Ga0307379_11110461	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	663	Open in IMG/M
3300031565\|Ga0307379_11115308	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	661	Open in IMG/M
3300031569\|Ga0307489_10019617	Not Available	3839	Open in IMG/M
3300031578\|Ga0307376_10962548	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	516	Open in IMG/M
3300031669\|Ga0307375_10455865	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	780	Open in IMG/M
3300031669\|Ga0307375_10547809	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	689	Open in IMG/M
3300031673\|Ga0307377_10446173	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	952	Open in IMG/M
3300031673\|Ga0307377_11085326	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	531	Open in IMG/M
3300032073\|Ga0315315_10666321	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	956	Open in IMG/M
3300032212\|Ga0316207_10337971	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	553	Open in IMG/M
3300032277\|Ga0316202_10348825	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	691	Open in IMG/M
3300033742\|Ga0314858_070032	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	871	Open in IMG/M
3300033742\|Ga0314858_166345	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	567	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.83%
Terrestrial	Environmental → Terrestrial	9.17%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.91%
Soil	Environmental → Terrestrial → Soil	9.17%
Freshwater	Environmental → Aquatic → Freshwater	0.92%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.69%
Strait	Environmental → Aquatic → Marine → Strait	23.85%
Coastal	Environmental → Aquatic → Marine → Coastal	15.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.09%
Clay	Environmental → Terrestrial → Soil → Clay	9.17%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.34%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	5.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.92%
Inlet	Environmental → Aquatic → Marine → Inlet	0.92%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	25.69%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	23.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.09%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.67%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.67%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	25.69%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	23.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	9.17%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.34%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.59%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.67%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.67%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.75%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.75%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.75%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	1.83%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.83%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.92%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.92%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.92%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.92%
M	Environmental → Aquatic → Marine → Unclassified → Unclassified → M	0.92%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001935	Marine microbial communities from Northern Gulf of Maine, Canada - GS007	Environmental	Open in IMG/M
3300001940	Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005731	Seawater microbial communities from Vineyard Sound, MA, USA - succinate ammended T14	Environmental	Open in IMG/M
3300005748	Seawater microbial communities from Vineyard Sound, MA, USA - control T7	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300020310	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032212	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-week pyrite	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100507653	3300000116	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN*
DelMOSpr2010_100671591	3300000116	Marine	MLQSPSVMYTYYMRDASAFWAQCDDSINIHDCEDNTICINGVDANAMFMTCRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYVDKNDTTTEETN*
DelMOSpr2010_101134662	3300000116	Marine	MLQSPSVMYTYYMRDASAYWAQCDDSINIHDCEDNTICINGVDANAMFMACRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYIDKNDTTTEKTN*
DelMOWin2010_101232091	3300000117	Marine	MLSQPSVMYTYCMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKRSVFGELKTKDHTIASAKEMIEALQKYVDKNDTTTEDN*
JGI20158J14315_102022881	3300001355	Pelagic Marine	MLSQPSVMYTYYMKDASVFWAECDESINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN*
JGI24006J15134_100915291	3300001450	Marine	FTSHYKDAPMLSQPSVMYTYYMKDASVYWAECDDSINLHNCEDDTICIHGVDATAMFMACRNALCSKNSVFGELKTRDYTIASAKEMIEALQKYVDKNDTTTEDN*
JGI24003J15210_101081481	3300001460	Marine	MLSQPSVMYTYCMKDASVFWAGCDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKRNVFNELKVRDSTLASAAEMIQALQKFVDKNDTTTEDN*
GOS2223_10049717	3300001935	Marine	PSVMYTYYMRDASAFWAQCDDSINIHDCEDNTICINGVDANAMFMTCRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYVDKNDTTTTEEDN*
GOS2222_10063067	3300001940	Marine	VMLQSPSVMYTYYMQNASVFWAQCDDSLNLHDREDNTICIHGVDADSMFMACRNALCSKRNVFEEPTDKPHILASAKEMIEALQEYVDKNDTTTEDN*
GOS2218_10442221	3300001947	Marine	VMLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDASAMFMTCRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYVDKNDTTTEEEDAN*
Ga0065861_10393392	3300004448	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKRSVFAELKTKDHTIESAKEMIAALQKYVDKNDTTTTEEDAN*
Ga0065861_10393402	3300004448	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKRSVFAELKTKDHTIESAKEMIVALQEYVDNNDTTTEDN*
Ga0066224_10041631	3300004457	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKRSVFAELKTKDHTIESAKEMI
Ga0066223_10223112	3300004461	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKRSVFAELKTKDHTIESAKEMIEALQKYVDKNDTTTTEEDN*
Ga0066223_10223123	3300004461	Marine	MLQSPSVMYTYYMRDASAYWAQCDDSLNLHDCEDNTICINGVDANSMFMTCRNALCSKRSVLSELTTKPHVLESAKEMIAALQKYVDKNDTTTTEEEDAN*
Ga0076919_10657902	3300005731	M	MLSQPSVMYTYYMKDASVYWAECDDSLNLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN*
Ga0076925_10368151	3300005748	Marine	MYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN*
Ga0098048_10178622	3300006752	Marine	MLSQPSVMYTYYMKDAQVFWAECDDSLNLHDYEDNTICINGVNATAMFMACRNALCSNRNVFNELKTKDHTIESAKEMIAALQKYVDKNDTSSGKTKGEE*
Ga0098054_10537261	3300006789	Marine	FIKDAVMLQSPSVMYTYYMKGASVYWAQCDDSINLHDCEDNSICINGVNADAMFIACRNALCSKRNVFEELSDKPHILDSAKEMIEVLQKYVDKNDTTTEDN*
Ga0098055_11160821	3300006793	Marine	MLQSPSVMYTYYMKGASVYWAQCDDSINLHDCEDNSICINGVNADAMFIACRNALCSKRNVFEELSDKPHILDSAKEMIEVLQKYVDKNDTTTEDN*
Ga0098055_11339112	3300006793	Marine	MYTYYMRDASVYWAECDDSINLHDCEDNTICIHGVDANAMFLACRNALCSKNSVFGELKTKNHTIASAKEMIEVLQKYVSDNNEEDN*
Ga0098055_12763812	3300006793	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTRDHTIASAKEMIKVLQKYVSDNNEEDN*
Ga0098055_13424623	3300006793	Marine	FIKDAVLLSQPSVMYTYYMKDASVYWAECDDSINLHDYEDNTICINGVNANAMFMACRNALCSKNSVFKELKAKDHTIASAKEMIEALQKYVSDNNEEDN*
Ga0098060_11287331	3300006921	Marine	MLSQPSVMYTYCMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKRNVFNELKTKDHTIESAKEMIAALQKYVDENDTTTEDN*
Ga0098051_10085657	3300006924	Marine	MKGASVYWAQCDDSINLHDCEDNSICINGVNADAMFIACRNALCSKRNVFEELSDKPHILDSAKEMIEVLQKYVDKNDTTTEDN*
Ga0098051_11827431	3300006924	Marine	MLTGFTFNTFTNTTKDAVLLSQPSVMYTYYMKDASVYWAECDDSINLHDYEDNTICINGVNANAMFMACRNALCSKNSVFKELKAKDHTIASAKEMIEALQKYVSDNNEEDN*
Ga0102817_10697991	3300007555	Estuarine	FIKDAVMLQSPSVMYTYYMRTASAYWAQCDDSLNLHDCEDNTICINGVDANAMFMTCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDKNDTTTEDN*
Ga0102852_10664353	3300007718	Estuarine	SVMYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNALCSKTSVFGELKTKDNTIKSAKEMIEALQKYVDKNDTTTTEDN*
Ga0105744_11074384	3300007863	Estuary Water	MRNASAYWAQCDDSLNLHDCEDNTICINGVDANAMFIACRNALCSKRNVFEDLTTKPHILASAKEMIVALQEYVNNNDTTTEEDN*
Ga0105738_10413662	3300007953	Estuary Water	MKDASVFWAECDDSINLHDWEDNTICIHGVDATAMFMACRNALCSKTSVFGELKTKDNTIKSAKELIEALQKYVDKNDTTTTEDN*
Ga0105748_102261592	3300007992	Estuary Water	MKDASVYWAECDDSINLHNCEDDTICIHGVDATAMFMACRNALCSKNSVFGELKTRDHTIKSAKEMIEALQKYVDKNDTTTTEDN*
Ga0102829_10294986	3300009026	Estuarine	MRTASAYWAQCDDSLNLHDCEDNTICINGVDANAMFMTCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDKNDTTTTEDN*
Ga0102854_10214638	3300009058	Estuarine	MKDASVFWAECDDSINLHDWEDNTICIHGVDATAMFMACRNALCSKTSVFGELKTKDNTIKSAKEMIEALQKYVDKNDTTTTDDN*
Ga0115568_104955923	3300009498	Pelagic Marine	FTSHYKDAPMLSQPSVMYTYYMKDASVFWAECDESINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN*
Ga0115003_100601636	3300009512	Marine	FNKFTSHNKDAPMLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGINADAMFLACRNALCSKRSVFGELKTKDFTIKSAKEMIEALQKYVDKNDTTTEDN*
Ga0098049_12622581	3300010149	Marine	MKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTRDHTIASAKEMIKVLQKYVSDNNEEDN*
Ga0098056_10115094	3300010150	Marine	MKDAQVFWAECDDSLNLHDYEDNTICINGVNATAMFMACRNALCSNRNVFNELKTKDHTIESAKEMIAALQKYVDKNDTSSGKTKGEE*
Ga0098056_10376214	3300010150	Marine	MRDASVYWAECDDSINLHDCEDNTICIHGVDANAMFLACRNALCSKNSVFGELKTKNHTIASAKEMIEVLQKYVSDNNEEDN*
Ga0098056_11388773	3300010150	Marine	FIKDAVLLSQPSVMYTYYMKDASVYWAECDDSINLHDCEDNSICINGVNATAMFMACRNALCSKNSVFEELKTRDHTIAAAKEMITALQKYVLDNNEEDN*
Ga0098056_11924674	3300010150	Marine	MKDASVYWAECDDSINLHDYEDNTICINGVNANAMFMACRNALCSKNSVFKELKAKDHTIASAKEMIEALQKYVSDNNEEDN*
Ga0118731_1132214941	3300010392	Marine	FTSHYKDAPMLSQPSVMYTYYMKDASVFWAECDDSINIHDYEDNTICIHGINADAMFMACRNAMCSKNNIFNELKVKDSALSSAKEMIGALRNFVDNNSATTEDN*
Ga0151674_10531133	3300011252	Marine	MKDASVFWAECDDSINLHDYEDNTICINGVDADAMFLACRNALCSKNSVFGGLKTKDLTIKSAKEMIEALQKYVDKNDTTTEETN*
Ga0151677_10971593	3300011258	Marine	FTSHYKDAPMLSQPSVMYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTPEED*
Ga0181369_10178563	3300017708	Marine	LLSQPSVMYTYYMKDASVYWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKNSVFRELKTKDHTIASAKEMITVLQKYVSDNNEEDN
Ga0181387_10177803	3300017709	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDHEDNTICIHGVDATAMFMACRNALCSKNSVFGEIKTRDFTIESAKEMIKALQKYVEENN
Ga0181387_10411142	3300017709	Seawater	MLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFITCRNALCSKNSVFEELSTKPHILASAKEMIVALQEYVNNNDTTTEEDN
Ga0181387_10884251	3300017709	Seawater	KDAPMLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTKDHTISSAKEMIEALQKYVEENN
Ga0181412_10284352	3300017714	Seawater	MLSQPSVTYTYYMRDASVFWAECDDSINLHDYEDNTICINGVDATSMFLACRNALCSKRSVFAELKTKDHTIASAKEMIAALQKYVDKNDTITEDDCC
Ga0181412_10425995	3300017714	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDHEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTKEHTIASAKEMIATLQKYVEENN
Ga0181390_10090479	3300017719	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTKDHTISSAKEMIEALQKYVEENN
Ga0181398_10032519	3300017725	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDFEDNTICIHGINADAMFLACRNALCSKRSVFAELKAKDHTIDSAKEMIAALQKYVDKNDTTTEDN
Ga0181401_10354542	3300017727	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDHEDNTICIHGVDATAMFMACRNALCSKNNVFGELKTKEHTIASAKEMIATLQKYVEENN
Ga0181401_10381182	3300017727	Seawater	MLSQPSVTYTYYMRDASVFWAECDDSINLHDYEDNTICINGVDATSMFLACRNALCSKRSVFAELKTKDHTIASAKEMIEALQKYVDKNDTITEDN
Ga0181419_10073899	3300017728	Seawater	MLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFMTCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDNNDTTTEEDN
Ga0181419_10159291	3300017728	Seawater	MLTGFTYTNTFIKDAVLLSQPSVMYTYYMNDASVYWAECDDSLNLHDNEDNTICIHGVNASAMFMACRNALCSNRNVFGELKTRDHTIASAKEMIVALQKYVDKNGTTTEDN
Ga0181419_10202974	3300017728	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNADAMFLACRNALCSKRSVFAELKTKDHTINSAKEMIEALQKYVDNNDTTTTNEDD
Ga0181419_11039861	3300017728	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGINADAMFLACRNALCSKRSVFAELKTKDHTINSAKEMIAALQKYVDKNATTTEDN
Ga0181431_10159231	3300017735	Seawater	AVLLSQPSVMYTYYMNDASVYWAECDDSLNLHDNEDNTICIHGVNASAMFMACRNALCSNRNVFGELKTRDHTIASAKEMIVALQKYVDKNGTTTEDN
Ga0181431_10216061	3300017735	Seawater	ANTFTHYKDAPMLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTKEHTIASAKEMIATLQKYVEENN
Ga0181431_10460005	3300017735	Seawater	MLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFITCRNALCSKNSVFEELSTKPHILASAKEMIVALQEYVDNNDTTTEEDN
Ga0181418_11584522	3300017740	Seawater	MLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFMTCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDN
Ga0181400_10280945	3300017752	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDHEDNTICIHGVDATAMFMACRNALCSKNNVFGELKTKEHTIASAKEMIAT
Ga0181420_11367222	3300017757	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGVNADAMFLACRNALCSKNSVFGELKTKDHTIASAKEMNAALQKYVLDNNEENN
Ga0181420_11899861	3300017757	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGINADAMFLACRNALCSKRSVFAELKTKDHTIKSAKEMIAALQKYVDKNATTTEDN
Ga0181422_10619635	3300017762	Seawater	MLSQPSVMYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRSVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTTEEDN
Ga0181385_10263084	3300017764	Seawater	MLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFITCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDNNDTTTEEDN
Ga0181386_10201648	3300017773	Seawater	SPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANSMFITCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDNNDTTTEEDN
Ga0181386_10982332	3300017773	Seawater	SPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDADAMFIACRNALCSKRNVFEDLTTKPHILASAKEMIVALQEYVNNNDTTTEEDN
Ga0181394_100095322	3300017776	Seawater	MLSQPSVTYTYYMKDASVFWAECDDSINLHDYEDNTICINGVDATSMFMACRNALCSKRSVFAELKTKDHTIDSAKEMIAALQKYVDKNDTITEDN
Ga0181380_11832871	3300017782	Seawater	VLLIQMLADFTYTNTFIKDAVLLSQPSVMYTYYMKGASVYWAECDDSINLNDYEDNTICINGVDATSMFMACRNALCSKNSVFGELKTKDHTISSAKEMIEALQKYVEENN
Ga0188851_10370922	3300018682	Freshwater Lake	FIKDAVLLQSPSVTYTYYMRDASVYWAECDDSINLYDFEDNTICINGINADAMFMACRNAMCSKNNVFNELKVRDSALSSAKEMIEALQKYVDKNDTTTENN
Ga0211515_10027112	3300020310	Marine	MKDASVFWAECDDSINLHDYEDNTICINGINADAMFMACRSALCSKRNVFNELKTKEHTIESAKEMIKALEKYVVKNDTSTKDD
Ga0211504_10510703	3300020347	Marine	MKDASVYWAECDDSINLHDCEDNAICINGVNATAMFMACRNALCSKRNVFEELSDKPHILNSAKEMIEALQKYVDKNDTTTTEETNXCQLKPQSS
Ga0211505_10954202	3300020352	Marine	MLTGFTFNTFIKDAVLLQSPSVMYTYYMKDASVYWAECDDSINLHDCEDNAICINGVNATAMFMACRNALCSKRNVFEELSDKPHILNSAKEMIEALQKYVD
Ga0211554_101351062	3300020431	Marine	MLQSPSVMYTYYMRDASAYWAQCDDSINIHDCEDNTICINGVDANSMFIACRNALCSKRSVFEELSTKPHMLESAKEMIAALQEYVDNNDTTTTEEEDAN
Ga0211554_104246472	3300020431	Marine	MLQSPSVMYTYYMRDASAFWAQCDDSINIHDCEDNTICINGVDANAMFMTCRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYVDKNDTTTTEETN
Ga0211514_1000011946	3300020459	Marine	MLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGINADAMFMACRSALCSKRNVFNELKTKEHTIESAKEMIKALEKYVVKNDTSTKDD
(restricted) Ga0233412_100548541	3300023210	Seawater	MLSQPSVMYTYCMKDASVFWAECDESINLHDYEDNTICIHGVDATAMFMACRNALCSKNSVFGELKTRDHTIASAKEMIKALQKYVDKNDTTTEDN
Ga0244775_105337381	3300024346	Estuarine	MLQSPSVMYTYYMRTASAYWAQCDDSLNLHDCEDNTICINGVDANAMFMTCRNALCSKNSVFEELSTKPHILASAKEMIEALQKYVDKNDTTTEDN
Ga0208298_10040017	3300025084	Marine	MLTGFTFNTFTNTTKDAVLLSQPSVMYTYYMKDASVYWAECDDSINLHDYEDNTICINGVNANAMFMACRNALCSKNSVFKELKAKDHTIASAKEMIEALQKYVSDNNEEDN
Ga0208298_10061429	3300025084	Marine	MLSQPSVMYTYYMKDAQVFWAECDDSLNLHDYEDNTICINGVNATAMFMACRNALCSNRNVFNELKTKDHTIESAKEMIAALQKYVDKNDTSSGKTKGEE
Ga0208792_100054225	3300025085	Marine	MKGASVYWAQCDDSINLHDCEDNSICINGVNADAMFIACRNALCSKRNVFEELSDKPHILDSAKEMIEVLQKYVDKNDTTTEDN
Ga0208434_10904491	3300025098	Marine	SQGRTMLSQPSVMYTYYMKDAQVFWAECDDSLNLHDYEDNTICINGVNATAMFMACRNALCSNRNVFNELKTKDHTIESAKEMIAALQKYVDKNDTSSGKTKGEE
Ga0208669_10484253	3300025099	Marine	MLSQPSVMYTYCMKDASVFWAECDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKRNVFNELKTKDHTIESAKEMIAALQKYVDENDTTTEDN
Ga0208793_10093298	3300025108	Marine	MYTYYMRDASVYWAECDDSINLHDCEDNTICIHGVDANAMFLACRNALCSKNSVFGELKTKNHTIASAKEMIEVLQKYVSDNNEEDN
Ga0208793_11300371	3300025108	Marine	FIKDAVLLSQPSVMYTYYMKDASVYWAECDDSINLHDCEDNSICINGVNATAMFMACRNALCSKNSVFEELKTRDHTIAAAKEMITALQKYVLDNNEEDN
Ga0209535_10760801	3300025120	Marine	MLSQPSVMYTYCMKDASVFWAGCDDSINLHDYEDNTICIHGVDATAMFMACRNALCSKRNVFNELKVRDSTLASAAEMIQALQKFVDKNDTTTEDN
Ga0209337_11927783	3300025168	Marine	FTSHYKDAPMLSQPSVMYTYYMKDASIFWAECDDSINLHDYEDNTICINGVNATAMFMACRNALCSKNSVFVELKTKDHTIESAKEMIKALQKYVDKNDTTTEEMNDS
Ga0209337_13398831	3300025168	Marine	HFPKDAQMLSQPSVMYTYYMKDASVFWAECDDSINLHDYEDNTICINGINADAMFLACRNALCSKRSVFVELKTKDHTINSAKEMIEALQKYVDKNDTTTEEVNDS
Ga0209631_102611073	3300025890	Pelagic Marine	MLSQPSVMYTYYMKDASVFWAECDESINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTEDN
Ga0256368_10705451	3300028125	Sea-Ice Brine	SFTFNTFTSHYKDAPMLSQPSVMYTYYMKDASVFWAECDDSINLHDNEDNTICINGINADAMFLACRNALCSKRSVFAELKTKDHTINSAKEMIEALQKYVDKNDTTTEDN
Ga0183755_100219918	3300029448	Marine	MLQSPSVMYTYYMRNSQAFWHLCDDSLNISDYEDNTICINGVDANAMFATCRNALCSKRSVFEELTTKPHTLESAKEMIKALQEYVDNNDTTTTEEEDAN
Ga0183755_10225515	3300029448	Marine	MLSQPSVMYTYYMKDASVYWAQCDDSINLHDYEDNTICINGVDADAMFRACRNALCSKNNVFKELKIKDYTIASAKEMIKALQEYVDNNNTTTEDN
Ga0307380_107662584	3300031539	Soil	MLSQPSVMYTYYMKDASVFWAEWEDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTTEDD
Ga0307380_109176501	3300031539	Soil	MLSQPSVMYTYYMKDASVFWAECNDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQEYVDKNDTTTTEDD
Ga0307380_111145762	3300031539	Soil	MLSQPSVMYTYYMKDASVFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQEYVDKNDTTTTEDD
Ga0307379_111104611	3300031565	Soil	MLSQPSVMYTYYMKDASIFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQKYVDKNDTTTTEDDXC
Ga0307379_111153083	3300031565	Soil	YYMKDASVFWAECEDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTTEDD
Ga0307489_100196171	3300031569	Sackhole Brine	FTNTPKDAVMLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDANAMFMACRNALCSKNSVFDELSTKPHVLESAKEMIAALQKYVDKNDTTTTEEEDAN
Ga0307376_109625481	3300031578	Soil	SLSITNTNTGGISHSTHIHSSKDALMLSQPSVMYTYYMKDASIFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQKYVDKNDTTTTEDN
Ga0307375_104558651	3300031669	Soil	MLSQPSVMYTYYMKDASIFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQEYVDKNDTTTTEDD
Ga0307375_105478094	3300031669	Soil	MLSQPSVMYTYYMKDASVFWAECNDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQKYVDKNDTTTTTEDN
Ga0307377_104461735	3300031673	Soil	MLSQPSVMYTYYMKDASVFWAECEDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTTEDD
Ga0307377_110853261	3300031673	Soil	FTSHNKDVAMLSQPSVMYTYYMKDASIFWAECDDSINLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVKDSALSSAKEMIEALQKYVDKNDTTTTEETN
Ga0315315_106663211	3300032073	Seawater	FTSTPKDAVMLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDATAMFMACRNALCSKNSVFGELKTRDHTIESAKEMIKVLQKYVLDNNEENN
Ga0316207_103379711	3300032212	Microbial Mat	FTNTPKDAVMLQSPSVMYTYYMRNASAYWAQCDDSLNLHDCEDNTICINGVDADAMFIACRNALCSKRNVFEDLTTKPHILASAKEMIVALQEYVNNNDTTTEEDN
Ga0316202_103488251	3300032277	Microbial Mat	MLSQPSVMYTYYMKDASVFWAECDDSLNLHDFEDNTICINGINADAMFMACRNAMCSKRNVFNELKVRDSALSSAKEMIEALQKFVDKNDTTTTEEDN
Ga0314858_070032_480_734	3300033742	Sea-Ice Brine	MQNASAYWAQCDDSLNLHDREDNTICIHGVDANSMFMACRNALCSKRNVFEELTDKDHILASAKEMIEALQKYVDKNDTTTEDN
Ga0314858_166345_54_314	3300033742	Sea-Ice Brine	MRDASAYWAQCDDSINIHDCEDNTICINGVDATAMFMACRNALCSKRSVFDELTTKPHVLESAKEMIAALQKYVDKNDTTTTEEDN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters