NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089504

Metagenome Family F089504

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089504
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 52 residues
Representative Sequence MKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRITK
Number of Associated Samples 75
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 53.70 %
% of genes near scaffold ends (potentially truncated) 30.28 %
% of genes from short scaffolds (< 2000 bps) 67.89 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.477 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(29.358 % of family members)
Environment Ontology (ENVO) Unclassified
(55.046 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.661 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 43.21%    β-sheet: 0.00%    Coil/Unstructured: 56.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF04226Transgly_assoc 7.34
PF05045RgpF 6.42
PF12836HHH_3 3.67
PF13365Trypsin_2 2.75
PF03781FGE-sulfatase 2.75
PF12705PDDEXK_1 1.83
PF00777Glyco_transf_29 0.92
PF13578Methyltransf_24 0.92
PF01583APS_kinase 0.92
PF09723Zn-ribbon_8 0.92
PF04545Sigma70_r4 0.92
PF07883Cupin_2 0.92
PF00154RecA 0.92
PF00478IMPDH 0.92
PF16363GDP_Man_Dehyd 0.92
PF00535Glycos_transf_2 0.92
PF03796DnaB_C 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 7.34
COG3754Lipopolysaccharide biosynthesis proteinCell wall/membrane/envelope biogenesis [M] 6.42
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 2.75
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.92
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.92
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 0.92
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.48 %
All OrganismsrootAll Organisms27.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2222084006|2223493098All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.576Open in IMG/M
3300000117|DelMOWin2010_c10000331All Organisms → cellular organisms → Bacteria29060Open in IMG/M
3300001460|JGI24003J15210_10082288Not Available970Open in IMG/M
3300001472|JGI24004J15324_10002471Not Available7344Open in IMG/M
3300001589|JGI24005J15628_10000072Not Available78909Open in IMG/M
3300001589|JGI24005J15628_10013993All Organisms → cellular organisms → Bacteria3601Open in IMG/M
3300001589|JGI24005J15628_10048549Not Available1654Open in IMG/M
3300002231|KVRMV2_100159532Not Available1049Open in IMG/M
3300005239|Ga0073579_1174298All Organisms → cellular organisms → Bacteria58349Open in IMG/M
3300005239|Ga0073579_1538629Not Available760Open in IMG/M
3300006025|Ga0075474_10214501Not Available587Open in IMG/M
3300006802|Ga0070749_10018120All Organisms → cellular organisms → Bacteria4480Open in IMG/M
3300006802|Ga0070749_10088306All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1844Open in IMG/M
3300006802|Ga0070749_10235976Not Available1039Open in IMG/M
3300006802|Ga0070749_10385953Not Available774Open in IMG/M
3300006810|Ga0070754_10000680All Organisms → cellular organisms → Bacteria30398Open in IMG/M
3300006810|Ga0070754_10007802All Organisms → cellular organisms → Bacteria6971Open in IMG/M
3300006810|Ga0070754_10019078All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4053Open in IMG/M
3300006869|Ga0075477_10173988Not Available891Open in IMG/M
3300006870|Ga0075479_10303349Not Available626Open in IMG/M
3300006874|Ga0075475_10393982Not Available558Open in IMG/M
3300006916|Ga0070750_10001814All Organisms → cellular organisms → Bacteria11925Open in IMG/M
3300007344|Ga0070745_1076794Not Available1332Open in IMG/M
3300007344|Ga0070745_1248532Not Available644Open in IMG/M
3300007539|Ga0099849_1107625All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1106Open in IMG/M
3300009000|Ga0102960_1099468Not Available1059Open in IMG/M
3300009000|Ga0102960_1289310Not Available579Open in IMG/M
3300009433|Ga0115545_1133585Not Available875Open in IMG/M
3300009703|Ga0114933_10226961Not Available1257Open in IMG/M
3300009703|Ga0114933_10287194Not Available1094Open in IMG/M
3300010148|Ga0098043_1216803Not Available526Open in IMG/M
3300010296|Ga0129348_1197397Not Available685Open in IMG/M
3300010299|Ga0129342_1127361Not Available941Open in IMG/M
3300010299|Ga0129342_1283321Not Available572Open in IMG/M
3300010318|Ga0136656_1074163Not Available1208Open in IMG/M
3300012928|Ga0163110_10361471Not Available1078Open in IMG/M
3300012936|Ga0163109_10988821Not Available614Open in IMG/M
3300017720|Ga0181383_1005871Not Available3326Open in IMG/M
3300017745|Ga0181427_1116075Not Available654Open in IMG/M
3300017757|Ga0181420_1084061Not Available990Open in IMG/M
3300017763|Ga0181410_1056671Not Available1191Open in IMG/M
3300017818|Ga0181565_10000047Not Available73605Open in IMG/M
3300017818|Ga0181565_10250507All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1202Open in IMG/M
3300017949|Ga0181584_10082648Not Available2217Open in IMG/M
3300017949|Ga0181584_10167520All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1463Open in IMG/M
3300017950|Ga0181607_10196175Not Available1191Open in IMG/M
3300017951|Ga0181577_10166735Not Available1490Open in IMG/M
3300017956|Ga0181580_10014628All Organisms → cellular organisms → Bacteria6210Open in IMG/M
3300017956|Ga0181580_10016104All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon5907Open in IMG/M
3300017956|Ga0181580_11010868Not Available514Open in IMG/M
3300017957|Ga0181571_10389240Not Available865Open in IMG/M
3300017958|Ga0181582_10229810All Organisms → cellular organisms → Bacteria → PVC group1246Open in IMG/M
3300017962|Ga0181581_10046667All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3099Open in IMG/M
3300017962|Ga0181581_10497906Not Available754Open in IMG/M
3300017967|Ga0181590_10120132Not Available2035Open in IMG/M
3300017967|Ga0181590_10663724All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae706Open in IMG/M
3300017969|Ga0181585_10082796Not Available2437Open in IMG/M
3300017969|Ga0181585_10098647Not Available2196Open in IMG/M
3300017969|Ga0181585_10121748All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1936Open in IMG/M
3300017969|Ga0181585_10193647Not Available1461Open in IMG/M
3300017969|Ga0181585_10382592All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon963Open in IMG/M
3300017986|Ga0181569_10214135Not Available1353Open in IMG/M
3300017986|Ga0181569_10386440All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon959Open in IMG/M
3300017986|Ga0181569_10686785All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium678Open in IMG/M
3300018080|Ga0180433_10464358All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla967Open in IMG/M
3300018421|Ga0181592_10312358All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1133Open in IMG/M
3300018424|Ga0181591_10473881Not Available918Open in IMG/M
3300018428|Ga0181568_10068359All Organisms → cellular organisms → Bacteria2997Open in IMG/M
3300020055|Ga0181575_10277364Not Available958Open in IMG/M
3300020347|Ga0211504_1000019Not Available73929Open in IMG/M
3300020403|Ga0211532_10006529All Organisms → cellular organisms → Archaea7910Open in IMG/M
3300020403|Ga0211532_10092394Not Available1310Open in IMG/M
3300020403|Ga0211532_10231972Not Available727Open in IMG/M
3300020438|Ga0211576_10003673Not Available10649Open in IMG/M
3300020438|Ga0211576_10026973Not Available3426Open in IMG/M
3300020438|Ga0211576_10556740Not Available575Open in IMG/M
3300020438|Ga0211576_10668081Not Available511Open in IMG/M
3300020442|Ga0211559_10000077Not Available53072Open in IMG/M
3300020442|Ga0211559_10307900Not Available737Open in IMG/M
3300020451|Ga0211473_10000552Not Available19617Open in IMG/M
3300020451|Ga0211473_10082269Not Available1634Open in IMG/M
3300020474|Ga0211547_10053156All Organisms → cellular organisms → Archaea2172Open in IMG/M
3300021371|Ga0213863_10214646Not Available840Open in IMG/M
3300021379|Ga0213864_10000138Not Available30806Open in IMG/M
3300021389|Ga0213868_10599657Not Available576Open in IMG/M
3300021957|Ga0222717_10000966All Organisms → cellular organisms → Bacteria23981Open in IMG/M
3300022187|Ga0196899_1034507Not Available1752Open in IMG/M
3300023115|Ga0255760_10224252Not Available983Open in IMG/M
3300023116|Ga0255751_10454634Not Available618Open in IMG/M
3300023172|Ga0255766_10247898Not Available938Open in IMG/M
3300023175|Ga0255777_10349859Not Available816Open in IMG/M
3300024183|Ga0228603_1066381Not Available566Open in IMG/M
3300024188|Ga0228602_1002803Not Available1708Open in IMG/M
3300024235|Ga0228665_1010203All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1876Open in IMG/M
3300024296|Ga0228629_1174866Not Available554Open in IMG/M
3300025132|Ga0209232_1062867Not Available1325Open in IMG/M
3300025138|Ga0209634_1004263Not Available9470Open in IMG/M
3300025138|Ga0209634_1016557Not Available4229Open in IMG/M
3300025671|Ga0208898_1004920Not Available7584Open in IMG/M
3300025674|Ga0208162_1142095Not Available666Open in IMG/M
3300025674|Ga0208162_1167901Not Available585Open in IMG/M
3300025759|Ga0208899_1145967Not Available816Open in IMG/M
3300025853|Ga0208645_1052288All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1939Open in IMG/M
3300025889|Ga0208644_1158894Not Available1027Open in IMG/M
3300025892|Ga0209630_10347470Not Available658Open in IMG/M
3300027917|Ga0209536_102918202Not Available553Open in IMG/M
3300028197|Ga0257110_1002592Not Available8414Open in IMG/M
3300032073|Ga0315315_10000007Not Available157014Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh29.36%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous20.18%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine8.26%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.42%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.67%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.75%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.83%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.83%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.92%
MarineEnvironmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.92%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.92%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.92%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2222084006Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - oil_dispersant_7EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300023115Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300024183Seawater microbial communities from Monterey Bay, California, United States - 3DEnvironmentalOpen in IMG/M
3300024188Seawater microbial communities from Monterey Bay, California, United States - 2DEnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024296Seawater microbial communities from Monterey Bay, California, United States - 36DEnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22239090062222084006MarineMKLLDRIALNSLIKTITNFILAVIKIFAPKPIKEITPKKRRPIKDLLDKVFKND
DelMOWin2010_1000033193300000117MarineMKLLDKIALNSLIKTITNFILAILKMFKPGDITAPKPKRPLKDLLDRIFKK*
JGI24003J15210_1008228833300001460MarineALNSLIKTITSFILAILKMFAPTKSDSITPRERKRPVLDFLKKWMK*
JGI24004J15324_1000247133300001472MarineMRLLDKIALNSLIKTITSFILAILKMFAPTKSDXXTPXERKRPVLDFLKKWMK*
JGI24005J15628_10000072553300001589MarineMRLLDKIALNSLVKTITNFILAILKMFKPTDITTPKPKRPLKDLLDRIFNK*
JGI24005J15628_1001399343300001589MarineMKLLDKIALNSLVKTITSFILSLIKLFKPNTDGGISTPKKRRPLRDLLDRWVK*
JGI24005J15628_1004854933300001589MarineMRLLDKIALNSLIKTITSFILAILKMFAPTKSDSTTPKERKRPVLDFLKKWMK*
KVRMV2_10015953223300002231Marine SedimentMKLLDKIALNSLIKTITNFILAILKMFKPTDITTPKNKRPLKDLLDRIFKK*
Ga0073579_1174298383300005239MarineMKLLDKIALNSLIKTITNFILAILKMFAPKQHDVKPEKKRPVLDFLRRWIK*
Ga0073579_153862933300005239MarineLLMKLLDKIALNSLVKTITSFILSLIKLFKPNTDGGISTPKKKKTLKRPAR*
Ga0075474_1021450113300006025AqueousMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPAKKRRPLRDLLDRITK*
Ga0070749_1001812073300006802AqueousMKLLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK*
Ga0070749_1008830653300006802AqueousMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRITK*
Ga0070749_1023597613300006802AqueousLMKFLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK*
Ga0070749_1038595323300006802AqueousMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKR
Ga0070754_10000680363300006810AqueousMKLLDRIAISRLVKTITDFILALLKILKPSNPSVIIDPKKKRRPLKDLLDRWRT*
Ga0070754_1000780213300006810AqueousIMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPAKKRRPLRDLLDRITK*
Ga0070754_1001907823300006810AqueousMKLLDKIALNSLIKTITNFILAICKIFASKNTDIVKPPKRRRPLRDLLDRFTK*
Ga0075477_1017398823300006869AqueousMKLLDRIAINSLVKTITSFILAVLKIFQPTNTIEKPKRRPLRDLLDKVFKK
Ga0075479_1030334923300006870AqueousMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITK*
Ga0075475_1039398213300006874AqueousMKLLDRIAINSLVKTITSFILAVLKIFQPTNTIEKPKRRPLRDLL
Ga0070750_10001814173300006916AqueousMKFLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK*
Ga0070745_107679423300007344AqueousMKLLDRIAINSLVKTITSFILAVLKIFQPTNTIEKPKRRPLRDLLDKVFKK*
Ga0070745_124853213300007344AqueousKMKLLDRIALNSLIKTVTNFILAILKIFAPKNTDIVQPPKKRRPLKDLLDRILK*
Ga0099849_110762523300007539AqueousMKLLDRIALNRLIKTVTNFILAILKIFAPTKIEDVEKSQRKRPVIDAIRRWIKP*
Ga0102960_109946833300009000Pond WaterMKFLDKIALNSLIKTISNFILSLIKILSPNQSVHKPRRRPLKDILDRWKNK*
Ga0102960_128931023300009000Pond WaterMKLLDRIAINSLIKTITHFILSLIKIFNPTATEKTKRRPLRDLLDRLKNK*
Ga0115545_113358523300009433Pelagic MarineMKLLDKIALNSLVKTITNFILAILKMFKPGDVTAPKPKRPLKDLLDRIFKK*
Ga0114933_1022696123300009703Deep SubsurfaceMRLLDKIALNSLIKTITSFILAILKMFAPSKSDSITPRERKRPVLDFLKKWMK*
Ga0114933_1028719423300009703Deep SubsurfaceMKLLDKIALNSLIKTITNFILAILKMFAPQQHDVTPDKKRPFLDFLRRWKK*
Ga0098043_121680313300010148MarineMKLLDKIALNSLIKTITNFILAILKMFKPVDTTAPKPKRPLKDL
Ga0129348_119739723300010296Freshwater To Marine Saline GradientMKLLDRIALNSLIKTVTNFILAILKIFAPTKIEDVEKSQRKRPVIDAIRRWIKP*
Ga0129342_112736133300010299Freshwater To Marine Saline GradientMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRITK*
Ga0129342_128332123300010299Freshwater To Marine Saline GradientMKLLDRLAINSLVKTITNFILAIIKIFKPNDITEPKKRRRPLKDLLDRLKK*
Ga0136656_107416313300010318Freshwater To Marine Saline GradientMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRP
Ga0163110_1036147123300012928Surface SeawaterMKLLDKIALNSLVKTITNFILAILKMFKPVDTTAPKPKRPLKDLLDRIFKK*
Ga0163109_1098882123300012936Surface SeawaterMKLLDKIALNSLVKTITSFILAILKMFAPTQHDVAPDKKRPLLDFLRRWKK*
Ga0181383_100587163300017720SeawaterMKLLDKIALNSLVKTITNFILAILKMFKPTDITTPKHKRPLKDLLDRIFKK
Ga0181427_111607533300017745SeawaterLLDKIALNSLIKTITNFILAILKMFAPNNDKAAPKPKRPIKDLIDRLFKK
Ga0181420_108406133300017757SeawaterRRLFMRLLDKIALNSLIKTITSFILAILKMFAPSKSDNITPRERKRPVLDFLKRWMK
Ga0181410_105667123300017763SeawaterMRLLDKIALNSLIKTITSFILAILKMFAPTKSDSITPRERKRPVLDFLKRWMK
Ga0181565_1000004723300017818Salt MarshMKLLDRIALNSLIKTITNFILAIIKIFAPDTKTDMVTPKRKRPIRDLLDKVFKNE
Ga0181565_1025050723300017818Salt MarshMKLLDRIAINSLIKTITNFILAIIKIFVPHNNSDESPKRRRPLRDLIDRIKK
Ga0181584_1008264843300017949Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPSNSNNEPTKPKRRRPLKDLLDKVFNND
Ga0181584_1016752053300017949Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITK
Ga0181607_1019617533300017950Salt MarshMKLLDRIAINTLIKTITNFILAIIKIFAPSKTTDIPKPKRKRPLRDLLDKVFKND
Ga0181577_1016673523300017951Salt MarshMRLLDKIALNSLIKTITNFILSIIKIFAPTSVSDDIKPKRKRPLKDLLDRIIKK
Ga0181580_1001462823300017956Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRIIK
Ga0181580_1001610423300017956Salt MarshMKLLDRIALNSLIKTVTNFILAILKIFAPKNTDIVQPPKKRRPLKDLLDRILK
Ga0181580_1101086813300017956Salt MarshLFMKLLDRLAINSLVKTITNFILAIIKIFKPNDITEPKKRRRPLKDLLDRLKK
Ga0181571_1038924013300017957Salt MarshMKLLDRIAINSLIKTITNFILAIIKIFVPHNNSDESPKRRRPLRDLIDRIKNE
Ga0181582_1022981013300017958Salt MarshDKIALNSLIKTITNFILSIIKIFAPTSVSDDIKPKRKRPLKDLLDRIIKK
Ga0181581_1004666723300017962Salt MarshMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITK
Ga0181581_1049790633300017962Salt MarshALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRIIK
Ga0181590_1012013223300017967Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPSNPNNEPTKPKRRRPLKDLLDKVFNND
Ga0181590_1066372413300017967Salt MarshLVKTITNFILAIIKIFKPNDITEPKKRRRPLKDLLDRLKK
Ga0181585_1008279623300017969Salt MarshMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPSKKRRPLRDLLDRITK
Ga0181585_1009864723300017969Salt MarshMKLIDRIALNSLIKTITNFILAILKMFAPKNTDTVKPPKKRRPLRDLLDRITK
Ga0181585_1012174843300017969Salt MarshMKLLDKIALNSLIKTITNFILAILKIFAPKNTDIVKPPKKRRPLRDLLDRITK
Ga0181585_1019364733300017969Salt MarshMKLLDRIAINSLIKTITNFILAIIKIFAPSKTKDIPNPKRKRPLRDLLDKVFKND
Ga0181585_1038259213300017969Salt MarshTIGEPIMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITK
Ga0181569_1021413533300017986Salt MarshMKLLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK
Ga0181569_1038644013300017986Salt MarshSVYTIGEPIMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITK
Ga0181569_1068678533300017986Salt MarshMRLLDKIALNSLIKTITNFILSIIKIFAPTSVSDDIKPKRKRPLKDLLDRIIKKXTNYL
Ga0180433_1046435813300018080Hypersaline Lake SedimentRRIPMKLLDRIAINSLIKTITSFILAVLKIFQPTNTIEKPKRRPLRDLLDKVLKK
Ga0181592_1031235833300018421Salt MarshMKLLDRLAINSLVKTITNFILAIIKIFKPNDITEPKKRRRPLKDLLDRLKK
Ga0181591_1029130343300018424Salt MarshMKLLDRIAINSLIKTISNFILAIIKIFHPTDSKSDPRRKQPIRDWLRRKKND
Ga0181591_1047388123300018424Salt MarshMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRI
Ga0181568_1006835973300018428Salt MarshFRRLLMKLLDRIAINSLIKTITNFILAIIKIFVPHNNSDESPKRRRPLRDLIDRIKNE
Ga0181575_1027736423300020055Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPSNSNNEPIRPKKRRPLKDLLDKVFKND
Ga0211504_1000019533300020347MarineMRLLDKIALNSLIKTITSFILAILKMFAPSKSDSITPRERKRPVLDFLKKWMK
Ga0211532_10006529103300020403MarineMKLLDKIALNSLIKTITNFILAILKMFKPVDTTAPKPKRPLKDLLDRIFKK
Ga0211532_1009239423300020403MarineMKLLDKIALNSLVKTITNFILAILKMFKPGDVTAPKPKRPLKDLLDRIFKK
Ga0211532_1023197213300020403MarineTSGLRFRRLLMKLLDKIALNSLIKTITNFILAILKMFAPNKGTAEPKPKRPIKDLIDRLFKK
Ga0211576_1000367393300020438MarineMRLLDKIALNSLIKTITNFILAILKMFAPNNDKAAPKPKRPIKDLIDRLFKK
Ga0211576_1002697333300020438MarineMRLLDKIALNSLIKTITSFILAILKMFAPTKSDSITPRERKRPVLDFLKKWMK
Ga0211576_1055674023300020438MarineMKLLDKIALNSLIKTITNFILAILKMFAPKQHDVAPDKKRPFLDFLRRWKK
Ga0211576_1066808113300020438MarineLNSLIKTITSFILAILKMFAPSKSDSITPREKKRPVLDFLKKWMK
Ga0211559_10000077373300020442MarineMKLLDKIALNSLIKTITSFILAIIKIFVPHSKDITDPKPKRPIRDLLDKWFKK
Ga0211559_1030790013300020442MarineIKTITNFILAILKMFAPKQHDVKPEKKRPVIDFLRRWIK
Ga0211473_10000552203300020451MarineMKLLDKIALNSLVKTITNFILAILKMFKPTDITTPKNKRPLKDLLDRIFKK
Ga0211473_1008226923300020451MarineMKLLDRIALNSLIKTITNFILAILKMFKPTETTTPKPKRPIRDILDRLFK
Ga0211547_1005315663300020474MarineMRLLDKIALNSLVKTITNFILAILKMFKPTDITTPKPKRPLKDLLDRIFNK
Ga0213863_1021464623300021371SeawaterMKLLDRIALNSLIKTITNFILAILKMFAPTKSDGLEPKERKKPVIDFLRRWIK
Ga0213864_10000138263300021379SeawaterMKLLDRIALNSLIKTITNFILAIIKIFAPEQTKEIKPKKRQPLRDLLDKVFKDD
Ga0213868_1059965733300021389SeawaterKIALNSLIKTITNFILAILKMFKPGDITAPKPKRPLKDLLDRIFKK
Ga0222717_10000966103300021957Estuarine WaterMTDNKHKGFLDKIAINQLVKIITDFILAILKMFSPNDSSEPKRRKPLKDILDRWFK
Ga0196899_103450733300022187AqueousMKLLDRIAISRLVKTITDFILALLKILKPSNPSVIIDPKKKRRPLKDLLDRWRT
Ga0255760_1022425213300023115Salt MarshTVMKLLDRIALNSLIKTITNFILAILKMFAPSNSNNEPTKPKRRRPLKDLLDKVFNND
Ga0255751_1045463413300023116Salt MarshMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLRDLLDRITKXI
Ga0255766_1024789813300023172Salt MarshMKLLDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRITK
Ga0255777_1034985933300023175Salt MarshMKFLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK
Ga0228603_106638113300024183SeawaterFLDKVALNSLIKTITNFILAILKMFAPNQTTDKSRRPLRDLLDKWRK
Ga0228602_100280333300024188SeawaterMKFLDKVALNSLIKTITNFILAILKMFAPNQTTDKSRRPLRDLLDKWRK
Ga0228665_101020313300024235SeawaterNSLIKTITNFILAILKMFAPNQTTDKSRRPLRDLLDKWRK
Ga0228629_117486623300024296SeawaterMKLLDKIALNSLIKTITNFILAILKMFAPTQHDVAPDKKRPLLDFLRRWKK
Ga0209232_106286733300025132MarineMKLLDKIALNSLIKTITNFILAILKMFKPGDITAPKPKRPLKDLLDRIFKK
Ga0209634_100426363300025138MarineMRLLDKIALNSLIKTITSFILAILKMFAPTKSDSTTPKERKRPVLDFLKKWMK
Ga0209634_101655723300025138MarineMKLLDKIALNSLVKTITSFILSLIKLFKPNTDGGISTPKKRRPLRDLLDRWVK
Ga0208898_100492063300025671AqueousMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPAKKRRPLRDLLDRITK
Ga0208162_114209523300025674AqueousMKLLDRIALNRLIKTVTNFILAILKIFAPTKIEDVEKSQRKRPVIDAIRRWIKP
Ga0208162_116790113300025674AqueousIRRISMKLLDRIAISRLVKTITDFILALLKILKPSNPSVIIDPKKKRRPLKDLLDRWRT
Ga0208899_114596733300025759AqueousMKLIDRIALNSLIKTITNFILAILKMFAPKNTDIVKPPKKRRPLKDLLDRITK
Ga0208645_105228853300025853AqueousMKLLDKIALNSLIKTITNFILAICKIFASKNTDIVKPPKRRRPLRDLLDRFTK
Ga0208644_115889433300025889AqueousLDKIALNSLIKTISNFILSLIKILSPNQSVDKPRRRPLKDILDRWKNK
Ga0209630_1034747023300025892Pelagic MarineMKLLDKIALNSLVKTITNFILAILKMFAPTQHDVAPDKKRPLLDFLRRWKK
Ga0209536_10291820223300027917Marine SedimentMKLLDRIAISRLVKTITDFILALLKILKPSTPSVIIDPKKKRRPLKDLLDRWRT
Ga0257110_100259243300028197MarineMKLLDKIALNSLIKTITNFILAILKMFAPKQHDVKPEKKRPVLDFLRRWIK
Ga0315315_100000071053300032073SeawaterMRLLDKIALNSLIKTITSFILAILKMFAPSKSDNITPRERKRPVLDFLKRWMK


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