Metagenome Family F089500

Overview

Basic Information

• Family ID: F089500
• Family Type: Metagenome
• Number of Sequences: 109
• Average Sequence Length: 43 residues
• Representative Sequence: MYYEVKNKISSTLVQLLVHFFNETKRTATKFEGLEKKRKIRTV
• Number of Associated Samples: 5
• Number of Associated Scaffolds: 109

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 4
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 57.75%
  β-sheet: 0.00%
  Coil/Unstructured: 42.25%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00078	RVT_1	1.83
PF00754	F5_F8_type_C	0.92
PF14291	DUF4371	0.92
PF00665	rve	0.92
PF01391	Collagen	0.92
PF05699	Dimer_Tnp_hAT	0.92
PF14529	Exo_endo_phos_2	0.92
PF00084	Sushi	0.92
PF00753	Lactamase_B	0.92
PF13843	DDE_Tnp_1_7	0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.92
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.92
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.92
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.92

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001463|JGI24021J15306_10101917	Not Available	2123

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Tunicates	Host-Associated → Tunicates	100.00%

Category

Habitat	Taxonomy	Distribution
Ascidians	Host-Associated → Tunicates → Ascidians	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Ecteinascidia Turbinata	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001463	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 1	Host-Associated
3300001539	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2	Host-Associated
3300001689	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 4	Host-Associated
3300001913	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 3	Host-Associated
3300027611	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24021J15306_1000033645	3300001463	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLPANFFNETKRKATKFESIEKREE*
JGI24021J15306_100077298	3300001463	Ecteinascidia Turbinata	MKNLLEGKNKISSTLPQLTVNIFFQTKRIAMKFEGLEKKE*
JGI24021J15306_1000917211	3300001463	Ecteinascidia Turbinata	MYYEVKNKISSKLVQLIVDIFNKEKRAATKFEGLEKEIRIIRTV*
JGI24021J15306_1000985611	3300001463	Ecteinascidia Turbinata	MYXEVKSKLSSTLIQLAVHFFNETKRTATKFEGLEKKRRIIRTV*
JGI24021J15306_100104714	3300001463	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLTVHFLNETKRTATKFEGLEKREK*
JGI24021J15306_100111653	3300001463	Ecteinascidia Turbinata	MHYEVKSKISSTLVQLTVHFLNETKRIAMKFEGLE*
JGI24021J15306_1001175911	3300001463	Ecteinascidia Turbinata	MYYEVKNKISSTVVQLTVHFFNETKRTATKCEGHEKREE*
JGI24021J15306_100134499	3300001463	Ecteinascidia Turbinata	MYYEVKNEISTTLVQSTVFFIETKRTATEFERLEKKRIYRIV*
JGI24021J15306_100140206	3300001463	Ecteinascidia Turbinata	MYYKVESKISTTRTVTVTFFTETKRTATKFEGLEKREEKRQHFQ*
JGI24021J15306_100151218	3300001463	Ecteinascidia Turbinata	MYYEVKSEISSTLVQLAVHFFNETKRTATKFEGLEKKRRIMRTV*
JGI24021J15306_1001776818	3300001463	Ecteinascidia Turbinata	MCYEVRSKISSTLVQLTVNFFTETKRTATKFEGIEKKRRII*
JGI24021J15306_100276186	3300001463	Ecteinascidia Turbinata	MYHEVKSKISSTLVQLAVHFFNGTKRTATKFEGFEKKRRIIRTV*
JGI24021J15306_100297946	3300001463	Ecteinascidia Turbinata	MYYEVKGKISSTLVQLTVHFFNETKQTASKFEGREKKRRIIRTA*
JGI24021J15306_100298236	3300001463	Ecteinascidia Turbinata	MNCEVKSKISNTLVPLTVIFLNHTKRTATKFEGLEKKRRIIQTV*
JGI24021J15306_100327907	3300001463	Ecteinascidia Turbinata	MCYEVKSEISSTLVQLAVNFFNETKRTATKFEGLEKK*
JGI24021J15306_100379227	3300001463	Ecteinascidia Turbinata	MYYEVQNKISSTLIQLAVHFLNETKRTETKFEGLEKKRRIIRTV*
JGI24021J15306_100441173	3300001463	Ecteinascidia Turbinata	MHYEVKSKISSTLLQLTVHFFNETKRTATKFEDPDKKRRIIRTL*
JGI24021J15306_100445152	3300001463	Ecteinascidia Turbinata	MYYEVKSKISSALVQLTVHFFNETKRTATKLEGR*
JGI24021J15306_100599555	3300001463	Ecteinascidia Turbinata	MYYEVKSKISSTLVRLAVHFFNETKQTATKFEGLEKKRRIIRTV*
JGI24021J15306_100613962	3300001463	Ecteinascidia Turbinata	MFYEVKSTISSTLVQLTVNFFDETERTATKVEGFEKKKIIIRTV*
JGI24021J15306_100655527	3300001463	Ecteinascidia Turbinata	MYYEVKNKISSTLVQLTLHFFNETKRTATKFQELEKKRRMIRTV*
JGI24021J15306_100656324	3300001463	Ecteinascidia Turbinata	MSYEVNNKTSSTLVQLTTFFNEAKQTATKFEGLENKRRIIRTV*
JGI24021J15306_100664464	3300001463	Ecteinascidia Turbinata	MYYELKRKVSSTLVQLDVDFFNETKRTATKFEGLENKEK*
JGI24021J15306_100731335	3300001463	Ecteinascidia Turbinata	MYGEVKSKISSTVVQLTANFFNETKQTATKFEGLEKKRRIIRMV*
JGI24021J15306_100767078	3300001463	Ecteinascidia Turbinata	MCYEVKSKISSTLVQLAVHFLNETKRTATNFEGL*
JGI24021J15306_100771642	3300001463	Ecteinascidia Turbinata	MYYEAKSEVSNTLARLAVHFFNDTKRTATKFEGLEKKRRIIRTA*
JGI24021J15306_100781284	3300001463	Ecteinascidia Turbinata	MYYEVKSKINSTLVQLTANFFNETKRIATKFEGLEKKEKNN*
JGI24021J15306_100801596	3300001463	Ecteinascidia Turbinata	MYYEVKSKIRSTLVQLPVQLFYETKRTATKFEGLDKKRRKVRTV*
JGI24021J15306_100853504	3300001463	Ecteinascidia Turbinata	VKREISSTLAQLMQIIFIETKRTATKFEGLEKREK*
JGI24021J15306_100857557	3300001463	Ecteinascidia Turbinata	VKSKIRSTLVQLSVQFFNETKRTATKFEGLEKKRRTVIRTV*
JGI24021J15306_101019174	3300001463	Ecteinascidia Turbinata	MYYEVKSKLSSTLVRLTVNFLNETKRTATKFEXLAKKRKIMRTV*
JGI24021J15306_101146305	3300001463	Ecteinascidia Turbinata	MYYEIKSKISSTLVQLTVIFFNETKRTATKFEEPGKKRRILQKL*
JGI24021J15306_101225902	3300001463	Ecteinascidia Turbinata	MYYEVKSKIGSTLVQLTANFFNETKRTATMFE*IETREE*
JGI24021J15306_101323442	3300001463	Ecteinascidia Turbinata	MHYEVKSKISSTLVQLTVQFFKETKRTATKFKGLEKKRRIIRTV*
JGI24021J15306_101326113	3300001463	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLQQIIFNETKRTATTFEGLEKREQ*
JGI24021J15306_101331392	3300001463	Ecteinascidia Turbinata	MKYEVKSKISGTLVQLTVGLNFFNETKRTATKFEGLEKMRRIIRTV*
JGI24021J15306_101356274	3300001463	Ecteinascidia Turbinata	MYYEVKSKMSSTLVQLSEILFNETKPTATRFEELEKKRRIIRTA*
JGI24021J15306_101545315	3300001463	Ecteinascidia Turbinata	MYYEVKSKRSSTLVQLDVHFFNETKRTATKFEGLEKREK*
JGI24021J15306_101603402	3300001463	Ecteinascidia Turbinata	MYYAVKSKISSTLVQLTLHFFIETKRTATKFEGLEKKRRITNTWE*
JGI24021J15306_102004581	3300001463	Ecteinascidia Turbinata	VKIYYEAKRKISITLVQLDVHFFNETKRTATKFEGLEKREK*
JGI24021J15306_102107112	3300001463	Ecteinascidia Turbinata	LKNVAYYEVKSKIRSTLIQLTGHFFNETKRTATKFEGLEKREEEFEQIW*
JGI24022J15233_1000834213	3300001539	Ecteinascidia Turbinata	MCYEVKSKISSTLVHLTVNFFNETKRTATNFEGLEKKRRIIRTV*
JGI24022J15233_100215924	3300001539	Ecteinascidia Turbinata	MYHEVKNKISTTLLQLTVNFFNETKQTATKFEGLEKKRRIIRIV*
JGI24022J15233_100343967	3300001539	Ecteinascidia Turbinata	MYYEVKGKISSTLVQLIENFFNKTKRTVTKFEGLDKNRRIIRTV*
JGI24022J15233_1003708212	3300001539	Ecteinascidia Turbinata	MYYELKKIKSSTLVQLIVHFFNERKRTATKFEGLEKKRRIIGTV*
JGI24022J15233_100402503	3300001539	Ecteinascidia Turbinata	MYYEVKSKLSSTLIQLGVHFFNETKRTATKFEGLEKKRRIIRTV*
JGI24022J15233_1004071412	3300001539	Ecteinascidia Turbinata	MYYEVKNKTNSTIVHLTVDLHFFNETKRTATKFEGLEKKRRIIRTV*VNSTGY
JGI24022J15233_100506276	3300001539	Ecteinascidia Turbinata	MYYEGKSKISSTLVQLTANFFEDTKRTATKFEGLVKKRTIEQFE*
JGI24022J15233_100517955	3300001539	Ecteinascidia Turbinata	MYYQVKSKISSTLVQLNVHFFNETKRTATKFERLEKKRRKIRTV*
JGI24022J15233_100543217	3300001539	Ecteinascidia Turbinata	MXYEVKSEISSTLVQLAVNFFNETKRTATKFEGLEKK*
JGI24022J15233_100612522	3300001539	Ecteinascidia Turbinata	MYYEVKKNKQHTYTVDLHFSNEKKRTATKFEELEKKRRIIRKV*
JGI24022J15233_100825084	3300001539	Ecteinascidia Turbinata	MYYEVKSKRSSTVVQLTVIFFNETKPTATKFEGLDKKRRKIRTV*
JGI24022J15233_100831333	3300001539	Ecteinascidia Turbinata	MHYEVKSKISSTLLQLTVHFFNETKRTATKFEDPNKKRRIIRTL*
JGI24022J15233_100837024	3300001539	Ecteinascidia Turbinata	MYYEVKNKISSTLLQLTAHFFNETKRTATKFEGLEKKRKII*
JGI24022J15233_100961873	3300001539	Ecteinascidia Turbinata	MYCEVVGRLSSTLVQLTEIFFNETKRTATKCEGLEKKEEKLQQFE*
JGI24022J15233_101089534	3300001539	Ecteinascidia Turbinata	MYYEVKRKISSTLVQLPVIFFYETKRTATKFEGLENKRRMIGIV*
JGI24022J15233_101144374	3300001539	Ecteinascidia Turbinata	MYYEVKSKLSSTLVRLTVNFLNETKRTATKFEGLAKKRKIMRTV*
JGI24022J15233_101214712	3300001539	Ecteinascidia Turbinata	MHYEVESKIRSTLVQLTVQFSKKTKRTATKFEGLEKR*
JGI24022J15233_101218833	3300001539	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLPANFFNETKRKATKFEAIEKREE*
JGI24022J15233_101486353	3300001539	Ecteinascidia Turbinata	MYYEVKNKISSTLVQLPVHFFNETKRTAMKFEGIEI*
JGI24022J15233_101658693	3300001539	Ecteinascidia Turbinata	MYFEIKNKTSSTLVQLTIHFLNEKKRTATKCEGLEKKRRTIRTV*
JGI24022J15233_101935241	3300001539	Ecteinascidia Turbinata	MNYEVKSKISSTLVQLIANLFNERERTATKFNRREKKRRIILTV*
JGI24159J19872_100085762	3300001689	Ecteinascidia Turbinata	MYYEVKNKQQHVQLIVHFFNETKRTATKSEGLKNRQE*
JGI24159J19872_100353523	3300001689	Ecteinascidia Turbinata	MYYEVKYKISIILVQLTVHFFNETKRTATKCEGLEKKRRIVLTI*
JGI24159J19872_100425464	3300001689	Ecteinascidia Turbinata	MCYEVKNKTSSTLIQLTVHLFNETKRTATKFERLEKKRTIIRTV*
JGI24159J19872_100618074	3300001689	Ecteinascidia Turbinata	VKMCYEVKSEISSTLVQLAVNFFNETKRTATKFEGLEKK*
JGI24159J19872_100654816	3300001689	Ecteinascidia Turbinata	MHYEVKSKISSTLVQLTVQFFNETKRTATKFKGLEKKRRIIRTV*
JGI24159J19872_100714482	3300001689	Ecteinascidia Turbinata	MYYEGKSKISSTLVQLTANFLNDTKRTATKFEGLVKKRTIEQFE*
JGI24159J19872_100743378	3300001689	Ecteinascidia Turbinata	MYYELKRKVSSTLVQLDVDXFNETKRTATKXEGXENKEK*
JGI24159J19872_100779234	3300001689	Ecteinascidia Turbinata	MYYEVKSEVSNTLARLAVHFFNDTKRTATKFEGLEKKRRIIRTA*
JGI24159J19872_100801878	3300001689	Ecteinascidia Turbinata	SKIRSTLVQLSVQFFNETKRTATKFEGLEKKRRTVIRTV*
JGI24159J19872_100823085	3300001689	Ecteinascidia Turbinata	MYYEVKNKISSTLVQLLVHFFNETKRTATKFEGLEKKRKIRTV*
JGI24159J19872_100861373	3300001689	Ecteinascidia Turbinata	MYHEVKSKISSTLVQLAVQFFNETKRTATKFEGLEKKRRIIRTV*
JGI24159J19872_100994383	3300001689	Ecteinascidia Turbinata	MYYEVKSKISRTLVQLMQIFYNETERTATKFEGLEKTKRIIRTV*
JGI24159J19872_101068294	3300001689	Ecteinascidia Turbinata	MKNHDDVKSKISSALVQLTVQFFNETKRTATEFDGLEKKRRII*
JGI24159J19872_101085881	3300001689	Ecteinascidia Turbinata	MYYEVKNKISSILVQLTVHFFNETKQTATKFERFDETRRIIRTV*
JGI24159J19872_101440802	3300001689	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLDVHFFNETKRTATKFERLEKREK*
JGI24159J19872_102274121	3300001689	Ecteinascidia Turbinata	MYHEVKSKISSTLVQLLVHFFNETKRTATKFEGFEKAKNNSNSLS
JGI24158J21664_1001328015	3300001913	Ecteinascidia Turbinata	MYYEVKSEISSTLVQLAVHFFNETKRTATKFEGLEKKRRIMRTA*
JGI24158J21664_100422291	3300001913	Ecteinascidia Turbinata	MYYEVKNKISSTLVQLSVHFFNETKLTATKLEGLEKKRRIIRK
JGI24158J21664_100530985	3300001913	Ecteinascidia Turbinata	MYYEVKNKISSTLLQLTVHFFNETKRTATKFEGLEKKRKIIRTV*
JGI24158J21664_100609175	3300001913	Ecteinascidia Turbinata	MHYEVKSKISSALVQLTVHFFHETKRTATKFEGLEKKRRIIRTI*
JGI24158J21664_100650743	3300001913	Ecteinascidia Turbinata	MHYEVKSKISSTLVQLTVQFFNETKRTATKFKGLEKKRRXIRTV*
JGI24158J21664_100663738	3300001913	Ecteinascidia Turbinata	MYYEVKNKTNSTIVHLTVDLHFFNETKRTATKFEGLEKKRRIIRTV*VNSTGYL
JGI24158J21664_100774597	3300001913	Ecteinascidia Turbinata	VKMCYEVNSKTSSTLVQLAVHFLNETKLTATKFEGL*
JGI24158J21664_101182852	3300001913	Ecteinascidia Turbinata	MYYEVKNTISSTLVQLLVHFFNETKRTATKFEGLEKKEKKNSTV*
JGI24158J21664_101240913	3300001913	Ecteinascidia Turbinata	MYYEVKIKIRSTLVQLTAHFFNETKRTATKFEGLEKKEEFEQFG*
JGI24158J21664_102325492	3300001913	Ecteinascidia Turbinata	MYYEVKKIISSTLVQLIVHFFNERKRTATKFEGLEKKRRIIGTV*
Ga0210059_100762813	3300027611	Ecteinascidia Turbinata	MYYEVKRKISSTLVQLPVIFFYETKRTATKFEGLENKRRMIGIV
Ga0210059_10078517	3300027611	Ecteinascidia Turbinata	MYYEVKSKISSTLVQLPANFFNETKRKATKFEAIEKREE
Ga0210059_10088225	3300027611	Ecteinascidia Turbinata	MYYEVKSKRSSTVVQLTVIFFNETKPTATKFEGLDKKRRKIRTV
Ga0210059_10117332	3300027611	Ecteinascidia Turbinata	MYYELKKIKSSTLVQLIVHFFNERKRTATKFEGLEKKRRIIGTV
Ga0210059_10135847	3300027611	Ecteinascidia Turbinata	MYYEVKGKISSTLVQLTVHFFNETKQTASKFEGREKKRRIIRTA
Ga0210059_10152115	3300027611	Ecteinascidia Turbinata	MYYEVKNKISSKLVQLIVDIFNKEKRAATKFEGLEKEIRIIRTV
Ga0210059_10213434	3300027611	Ecteinascidia Turbinata	MYYEVKSKINSTLVQLTANFFNETKRIATKFEGLEKKEKNN
Ga0210059_10233092	3300027611	Ecteinascidia Turbinata	MYYEVKSKISKTLVQLTANFMNEIKRTATKFEGLEKKRTIIRTV
Ga0210059_10270872	3300027611	Ecteinascidia Turbinata	MCYEVRSKISSTLVQLTVNFFTETKRTATKFEGIEKKRRII
Ga0210059_10303506	3300027611	Ecteinascidia Turbinata	MYYEVKNKISSTLLQLTAHFFNETKRTATKFEGLEKKRKII
Ga0210059_10316991	3300027611	Ecteinascidia Turbinata	MYYEVKGKISSTLVQLIENFFNKTKRTVTKFEGLDKNRRIIRTV
Ga0210059_10319202	3300027611	Ecteinascidia Turbinata	MFYEVKSTISSTLVQLTVNFFDETERTATKVEGLEKKKIIIRTV
Ga0210059_10434714	3300027611	Ecteinascidia Turbinata	EVKNKISSTLVQLPVHFFNETKRTATKFERLEKKRRIIRTV
Ga0210059_10621043	3300027611	Ecteinascidia Turbinata	MYYEVKSKRSSTLVQLDVHFFNETKRTATKFEGLEKREK
Ga0210059_10626185	3300027611	Ecteinascidia Turbinata	MYYEIKSKISSTLVQLTVIFFNETKRTATKFEEPGKKRRILQKL
Ga0210059_10671212	3300027611	Ecteinascidia Turbinata	MYYELKRKVSSTLVQLDVDFFNETKRTATKFEGLENKEK
Ga0210059_10717773	3300027611	Ecteinascidia Turbinata	MYGEVKSKISSTVVQLTANFFNETKQTATKFEGLEKKRRIIRMV
Ga0210059_10941812	3300027611	Ecteinascidia Turbinata	MYYEVKNKINSTLVQLSVHFFNETKLTATKLEGLEKKRRIIRKV
Ga0210059_11008513	3300027611	Ecteinascidia Turbinata	MYLEVKSKISSTLVQLLVHFFNETKRTATKFEGFEK
Ga0210059_11241752	3300027611	Ecteinascidia Turbinata	MYYEVKSKISSTLVRLAVHFFNETKQTATKFEGLEKKRRIIRTV
Ga0210059_11864232	3300027611	Ecteinascidia Turbinata	MYYEVKNKISSTLVQLPVHFFNETKRTATKFERLEKKRRIIRTV