Metagenome Family F089477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089477
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	107 residues
Representative Sequence	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Number of Associated Samples	78
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.35 %
% of genes near scaffold ends (potentially truncated)	32.11 %
% of genes from short scaffolds (< 2000 bps)	57.80 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (26.605 % of family members)
Environment Ontology (ENVO)	Unclassified (55.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.85% β-sheet: 37.96% Coil/Unstructured: 35.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03575	Peptidase_S51	31.19
PF11218	DUF3011	11.93
PF01476	LysM	11.01
PF00578	AhpC-TSA	10.09
PF07690	MFS_1	5.50
PF02195	ParBc	2.75
PF13614	AAA_31	1.83
PF13603	tRNA-synt_1_2	0.92
PF02577	BFN_dom	0.92
PF04389	Peptidase_M28	0.92
PF13103	TonB_2	0.92
PF11937	DUF3455	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.69 %
Unclassified	root	N/A	19.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.34 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.34 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10051161	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300002245\|JGIcombinedJ26739_100081096	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300002245\|JGIcombinedJ26739_100082263	All Organisms → cellular organisms → Bacteria	2991	Open in IMG/M
3300004080\|Ga0062385_10027756	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300004082\|Ga0062384_100106874	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300004091\|Ga0062387_100187302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1235	Open in IMG/M
3300005435\|Ga0070714_100100945	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300005437\|Ga0070710_10138255	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300005439\|Ga0070711_100920928	Not Available	747	Open in IMG/M
3300005439\|Ga0070711_101496581	Not Available	589	Open in IMG/M
3300005538\|Ga0070731_10034827	All Organisms → cellular organisms → Bacteria	3395	Open in IMG/M
3300005541\|Ga0070733_10015962	All Organisms → cellular organisms → Bacteria → Proteobacteria	4701	Open in IMG/M
3300005542\|Ga0070732_10036200	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300005542\|Ga0070732_10146188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1407	Open in IMG/M
3300005602\|Ga0070762_10012572	All Organisms → cellular organisms → Bacteria	4285	Open in IMG/M
3300005764\|Ga0066903_100527635	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300005921\|Ga0070766_10285920	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006028\|Ga0070717_10032714	All Organisms → cellular organisms → Bacteria	4192	Open in IMG/M
3300006163\|Ga0070715_10093708	Not Available	1387	Open in IMG/M
3300006176\|Ga0070765_100358178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1357	Open in IMG/M
3300006893\|Ga0073928_10000350	All Organisms → cellular organisms → Bacteria	109728	Open in IMG/M
3300010048\|Ga0126373_11910305	Not Available	657	Open in IMG/M
3300010358\|Ga0126370_11020258	Not Available	757	Open in IMG/M
3300012181\|Ga0153922_1002937	All Organisms → cellular organisms → Bacteria	5113	Open in IMG/M
3300012202\|Ga0137363_10072007	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300012677\|Ga0153928_1102910	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300016357\|Ga0182032_10525345	Not Available	976	Open in IMG/M
3300020581\|Ga0210399_10027509	All Organisms → cellular organisms → Bacteria	4533	Open in IMG/M
3300020581\|Ga0210399_10377101	All Organisms → cellular organisms → Bacteria → Acidobacteria	1184	Open in IMG/M
3300020581\|Ga0210399_10762007	Not Available	792	Open in IMG/M
3300020583\|Ga0210401_10014022	All Organisms → cellular organisms → Bacteria	7772	Open in IMG/M
3300021088\|Ga0210404_10152715	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300021168\|Ga0210406_10150991	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300021170\|Ga0210400_10385733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1155	Open in IMG/M
3300021171\|Ga0210405_10036249	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300021171\|Ga0210405_10075467	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
3300021181\|Ga0210388_10010936	All Organisms → cellular organisms → Bacteria	7226	Open in IMG/M
3300021181\|Ga0210388_10059838	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300021181\|Ga0210388_10807730	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300021401\|Ga0210393_10077373	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300021403\|Ga0210397_10341884	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300021405\|Ga0210387_10015135	All Organisms → cellular organisms → Bacteria	5971	Open in IMG/M
3300021407\|Ga0210383_10270027	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300021420\|Ga0210394_10004436	All Organisms → cellular organisms → Bacteria → Acidobacteria	16421	Open in IMG/M
3300021420\|Ga0210394_11713576	Not Available	526	Open in IMG/M
3300021432\|Ga0210384_10080755	All Organisms → cellular organisms → Bacteria	2923	Open in IMG/M
3300021433\|Ga0210391_10308093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1243	Open in IMG/M
3300021474\|Ga0210390_10133556	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300021475\|Ga0210392_10040540	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300021475\|Ga0210392_10611807	Not Available	808	Open in IMG/M
3300021477\|Ga0210398_11233882	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300021478\|Ga0210402_10079641	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300021479\|Ga0210410_10417364	Not Available	1201	Open in IMG/M
3300021560\|Ga0126371_10069898	All Organisms → cellular organisms → Bacteria	3412	Open in IMG/M
3300022557\|Ga0212123_10000135	All Organisms → cellular organisms → Bacteria	245814	Open in IMG/M
3300025906\|Ga0207699_10198709	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300025916\|Ga0207663_11193319	Not Available	613	Open in IMG/M
3300025939\|Ga0207665_10737253	Not Available	776	Open in IMG/M
3300026557\|Ga0179587_10096407	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300027266\|Ga0209215_1032730	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300027371\|Ga0209418_1057800	Not Available	690	Open in IMG/M
3300027545\|Ga0209008_1015161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1811	Open in IMG/M
3300027548\|Ga0209523_1130254	Not Available	518	Open in IMG/M
3300027575\|Ga0209525_1000088	All Organisms → cellular organisms → Bacteria → Acidobacteria	30485	Open in IMG/M
3300027842\|Ga0209580_10068488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1682	Open in IMG/M
3300027842\|Ga0209580_10080427	Not Available	1558	Open in IMG/M
3300027867\|Ga0209167_10096584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1507	Open in IMG/M
3300027869\|Ga0209579_10026799	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300027869\|Ga0209579_10109310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1467	Open in IMG/M
3300027908\|Ga0209006_10349016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1254	Open in IMG/M
3300028906\|Ga0308309_10283127	Not Available	1397	Open in IMG/M
3300031231\|Ga0170824_128489481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1494	Open in IMG/M
3300031680\|Ga0318574_10179040	Not Available	1213	Open in IMG/M
3300031715\|Ga0307476_10150829	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300031715\|Ga0307476_10586104	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300031715\|Ga0307476_10904099	Not Available	651	Open in IMG/M
3300031718\|Ga0307474_10054792	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300031718\|Ga0307474_10180203	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300031718\|Ga0307474_10667679	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031718\|Ga0307474_11036725	Not Available	649	Open in IMG/M
3300031719\|Ga0306917_10032844	All Organisms → cellular organisms → Bacteria	3352	Open in IMG/M
3300031720\|Ga0307469_10020931	All Organisms → cellular organisms → Bacteria	3553	Open in IMG/M
3300031720\|Ga0307469_10028063	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300031720\|Ga0307469_10320636	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300031753\|Ga0307477_10293769	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300031753\|Ga0307477_10622518	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300031754\|Ga0307475_10014153	All Organisms → cellular organisms → Bacteria	5424	Open in IMG/M
3300031754\|Ga0307475_10037493	All Organisms → cellular organisms → Bacteria → Acidobacteria	3569	Open in IMG/M
3300031754\|Ga0307475_10291887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300031754\|Ga0307475_10352488	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300031754\|Ga0307475_11007969	Not Available	654	Open in IMG/M
3300031820\|Ga0307473_10001351	All Organisms → cellular organisms → Bacteria → Acidobacteria	6503	Open in IMG/M
3300031820\|Ga0307473_10791078	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300031823\|Ga0307478_10042539	All Organisms → cellular organisms → Bacteria	3337	Open in IMG/M
3300031823\|Ga0307478_10337383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1240	Open in IMG/M
3300031823\|Ga0307478_10593812	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031947\|Ga0310909_10064877	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300031962\|Ga0307479_10008209	All Organisms → cellular organisms → Bacteria → Acidobacteria	9637	Open in IMG/M
3300031962\|Ga0307479_10113258	All Organisms → cellular organisms → Bacteria	2640	Open in IMG/M
3300031962\|Ga0307479_10404624	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300031962\|Ga0307479_10765296	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300032063\|Ga0318504_10185480	Not Available	968	Open in IMG/M
3300032180\|Ga0307471_100011317	All Organisms → cellular organisms → Bacteria → Acidobacteria	6026	Open in IMG/M
3300032205\|Ga0307472_100009550	All Organisms → cellular organisms → Bacteria → Acidobacteria	4801	Open in IMG/M
3300032205\|Ga0307472_100051595	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300032770\|Ga0335085_10611083	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300032783\|Ga0335079_10107251	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300032805\|Ga0335078_10869610	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300032828\|Ga0335080_10165963	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.17%
Host-Associated	Host-Associated	1.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.58%
Aquatic	Environmental → Aquatic	4.59%
Fungi	Host-Associated → Fungi	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.58%
Freshwater	Environmental → Aquatic → Freshwater	2.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%
Mycelium	Host-Associated → Fungi → Mycelium	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.81%
Loam	Environmental → Terrestrial → Soil → Loam	21.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	26.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100511613	3300001867	Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEALLPIA*
JGIcombinedJ26739_1000810962	3300002245	Forest Soil	MDLSPKQAVILQRTLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
JGIcombinedJ26739_1000822631	3300002245	Forest Soil	MDLSPKQAGILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTLRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
Ga0062385_100277563	3300004080	Bog Forest Soil	MDLSPQQAASLQRIHALGFELVAFPIYPSHVGIRKGNCAALLAPVASGTFRIFGEPTYVVDGNLSARITLDGHDYFIWKKQKLEATPARRAELESFAADLADALLAPM*
Ga0062384_1001068742	3300004082	Bog Forest Soil	MDLSPQQAASLQRIHALDFELVAFPIYPSHVGIRRGNCAALLAPVASGTFRIFGEPTYVVDGNLSARITLDGHDYFIWKKQKLEATPARRAELESFAADLAEALLAPM*
Ga0062387_1001873022	3300004091	Bog Forest Soil	MDLSPQQAASLQRIHALDFELVAFPIYPSHVGIRRGNCAALLAPVASGTFRIFGEPTYVVDGNLSARITLDGHDYFIWKKQKLEATPVRRAELESFAADLSEALLAPM*
Ga0070714_1001009453	3300005435	Agricultural Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPLE*
Ga0070710_101382552	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPNTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
Ga0070711_1009209281	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLVPVVSDTFQLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLSDALLPVD*
Ga0070711_1014965811	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
Ga0070731_100348273	3300005538	Surface Soil	MDLSPKQAVILQRTLSLGFELIAFPVYPNHVGIRKGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
Ga0070733_100159625	3300005541	Surface Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPAVPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLAEALLPVE*
Ga0070732_100362002	3300005542	Surface Soil	MDLTPKQAAVLQRVLSLGFELIALPVYPKHVGIRRGNCAALLAPAVPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLAEALLPVE*
Ga0070732_101461881	3300005542	Surface Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPLGPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELAAFADDLAEALLPVE*
Ga0070762_100125723	3300005602	Soil	MDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD*
Ga0066903_1005276353	3300005764	Tropical Forest Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDSHDYFIWKKQKLEATAARRAELASFTADLSDALLPVE*
Ga0070766_102859202	3300005921	Soil	MDLPPKQAALLQRILSLGFELITFPVYPNHIGIRRGNCAALLTPVAADTFQVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEGTAARQAELAAFAADLAEALLPVA*
Ga0070717_100327143	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDLAPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLVPVVPDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQWLEATPARRAELASFADDLSDALLPVD*
Ga0070715_100937081	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPETFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPLE*
Ga0070765_1003581782	3300006176	Soil	TNLSILSSGKRPMDLTPKQAVILQRILSLGFELITFPVYPNHVGIRRGSCAALLAPVVPDTFKMFAEPAYLVDGNLSARVTLDGHDYFIWKKQKLEATPARLAELTSFTDDLSEALLPVE
Ga0073928_1000035075	3300006893	Iron-Sulfur Acid Spring	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEAILPIA*
Ga0126373_119103052	3300010048	Tropical Forest Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATA
Ga0126370_110202581	3300010358	Tropical Forest Soil	LMDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDSHDYFIWKKQKLEATAARRAELASFTADLSDALLPVE*
Ga0153922_10029375	3300012181	Attine Ant Fungus Gardens	MDLTPKQATLLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPIAPDTFRVFAEPAYLVDGNLSARITLDGRDYYIWKKQKLEATAARQAELASFAADLAEALLPVA*
Ga0137363_100720073	3300012202	Vadose Zone Soil	MDLTPKQAAVLQRILSLGFELIAFPIYPNHVGIRRGNCAALLVPAVPDTFRLFAEPAYLVEGNLSARITLDGRDYFIWKKQRLEATPARRAEVASFADDLAEALLPVE*
Ga0153928_11029102	3300012677	Attine Ant Fungus Gardens	MDLTPKQATLLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPIAPDTFRVFAEPAYLVDGNLSARITLDGRDYYIWKKQKLEATAARQAELASFAADL
Ga0182032_105253451	3300016357	Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRENCTVLLAPFLRDNFQVFAEPAYLVDGNLSARITLDGYDYFIWKKQKVEATAARRAELASFADDLA
Ga0210399_100275091	3300020581	Soil	MDLSPKQGVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0210399_103771011	3300020581	Soil	MDLTPKQAALLQRLHSLGFEFVAFPIYPNHIGIRKGNCAALLAPVASDTFRVFTEPAYLVEGNLSAKIRLDGHEYYIWKKQKLEATPARRAEVEEFASELTEALLPTA
Ga0210399_107620071	3300020581	Soil	ATLSPSITLPTNLSILSSGKRPMDLTPKQAVILQRILSLGFELITFPVYPNHVGIRRGSCAALLAPVVPDTFKMFAEPAYLVDGNLSARVTLDGHDYFIWKKQKLEATPARLAELTSFTDDLSEALLPVE
Ga0210401_100140227	3300020583	Soil	MDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFADDLSDALLPVD
Ga0210404_101527151	3300021088	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAE
Ga0210406_101509911	3300021168	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEGLLPVE
Ga0210400_103857332	3300021170	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRVFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEALLPVE
Ga0210405_100362493	3300021171	Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNQVGIRRGNCAALLAPVVPDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPLE
Ga0210405_100754673	3300021171	Soil	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0210388_100109366	3300021181	Soil	MDLSPQQAALLQRIHALGFELVAFPIYPNHIGVRKGNCAALLAPIASGTFRIFGEPTYVVDGNLSAKITLDGHDYFIWKKQKLEATPARRAELESFAGDLTEALLPKV
Ga0210388_100598383	3300021181	Soil	MDLSPKQGVILQRILSLGFELIAFPVYPNHVGIRRGSCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0210388_108077302	3300021181	Soil	PFPARSLNCYPDFSMDLSPQQAALLQRIHALGFELVAFPIYPNHIGVRRGNCAALLAPIASGTFRIFGEPTYVVDGNLSAKISLDGHDYFIWKKQKLEATSARRAELESFVADLAEALLPQT
Ga0210393_100773731	3300021401	Soil	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGSCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0210397_103418842	3300021403	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSGALL
Ga0210387_100151354	3300021405	Soil	MDLSPQQAALLQRIHALGFELVAFPIYPNHIGVRRGNCAALLAPIASGTFRIFGEPTYVVDGNLSAKISLDGHDYFIWKKQKLEATSARRAELESFVADLAEALLPQT
Ga0210383_102700272	3300021407	Soil	MDLTPKQAGLLQRLHSLGFEFVAFPIYPNHIGIRKGNCAALLAPVASDTFRVFTEPAYLVEGNLSAKIRLDGHEYYIWKKQKLEATPARRAEVEEFASELTEALLPTA
Ga0210394_1000443615	3300021420	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPLGPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQQLEATPARRAELASFADDLAEALLPVE
Ga0210394_117135761	3300021420	Soil	RAMDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFADDLSDALLPVD
Ga0210384_100807552	3300021432	Soil	MDLSPKQAVILQRTLSLGFELIAFPVYPNHVGIRKGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0210391_103080931	3300021433	Soil	PSIAPQTNLSILSSGKRAMDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFADDLSDALLPVD
Ga0210390_101335563	3300021474	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDL
Ga0210392_100405404	3300021475	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATTARRAELTSFADDLSEGLLPVE
Ga0210392_106118071	3300021475	Soil	PRVSTLMDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRTELTSFAADLSDALLPVD
Ga0210398_112338821	3300021477	Soil	ILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRVFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEGLLPVE
Ga0210402_100796412	3300021478	Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRMFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELTSFADDLSGALLPVE
Ga0210410_104173642	3300021479	Soil	MDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0126371_100698983	3300021560	Tropical Forest Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARIALDGHDYFIWKKQRLEATAARRAELASFTADLSDALLPVE
Ga0212123_10000135182	3300022557	Iron-Sulfur Acid Spring	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEAILPIA
Ga0207699_101987093	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLVPVVSDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPLE
Ga0207663_111933191	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLVPVVSDTFQLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLSDALLPVD
Ga0207665_107372532	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVAPETFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLAVALLPLE
Ga0179587_100964073	3300026557	Vadose Zone Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLSPVVPETFRLFAEPAYLVEGNLSARITLDGRDYFIWKKQRLEATPARRAELALFADDLAEALLPVE
Ga0209215_10327302	3300027266	Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARIALDGHDYYIWKRQKLEATAARQAELASFAADLAEALLPVT
Ga0209418_10578001	3300027371	Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKRQKLEATAARQAELASFAADLAEALLPVT
Ga0209008_10151611	3300027545	Forest Soil	MDLSPKQAGILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTLRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFADDLSDALLPVD
Ga0209523_11302541	3300027548	Forest Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLVPVVSDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPLE
Ga0209525_10000887	3300027575	Forest Soil	MDLSPKQAVILQRTLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0209580_100684882	3300027842	Surface Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPLGPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELAAFADDLAEALLPVE
Ga0209580_100804273	3300027842	Surface Soil	MDLTPKQAAVLQRVLSLGFELIALPVYPKHVGIRRGNCAALLAPAVPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLAEALLPVE
Ga0209167_100965842	3300027867	Surface Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPAVPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLAEALLPVE
Ga0209579_100267994	3300027869	Surface Soil	MRRRSIAPPTNLSILSSAKRLMDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPAVPDTFKVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARRAELASFADDLADALLPVE
Ga0209579_101093101	3300027869	Surface Soil	RVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0209006_103490161	3300027908	Forest Soil	MDLSPKQAVILQRTLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTLRVFAEPAYLVDGNLSARITLDGHDYFIWKKQRLEATPARR
Ga0308309_102831271	3300028906	Soil	LPTNLSILSSGKRPMDLTPKQAVILQRILSLGFELITFPVYPNHVGIRRGSCAALLAPVVPDTFKMFAEPAYLVDGNLSARVTLDGHDYFIWKKQKLEATPARLAELTSFTDDLSEALLPVE
Ga0170824_1284894812	3300031231	Forest Soil	MDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHGYFIWKKQKLEATPARRAELTSFADDLADALLPVD
Ga0318574_101790401	3300031680	Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELASFTADLSD
Ga0307476_101508291	3300031715	Hardwood Forest Soil	MDLTPKQVVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEGLLPVE
Ga0307476_105861042	3300031715	Hardwood Forest Soil	MDLTPKQATLLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPIAPDTFRVFAEPAYLVDGNLSARITLDGRDYYIWKKQKLEATAARQAELASFAADLAEALLPVA
Ga0307476_109040991	3300031715	Hardwood Forest Soil	GKHPMDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELTSFAADLSDALLPVD
Ga0307474_100547923	3300031718	Hardwood Forest Soil	MDLTPKQATLLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPIAPDTFRVFAEPAYLVDGNLSARITLDGRDYYIWKKQKLETTAARQAELASFAADLAEALLPVA
Ga0307474_101802032	3300031718	Hardwood Forest Soil	MDLTPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPESFKMFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEALLPVE
Ga0307474_106676791	3300031718	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAFLVDGNLSARITLDGHDYYIWKKQKVEATAVRQ
Ga0307474_110367252	3300031718	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGLRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEALLPVV
Ga0306917_100328444	3300031719	Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELASFTADLSDALLPVE
Ga0307469_100209315	3300031720	Hardwood Forest Soil	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTTPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELASFADDLSDALLPVD
Ga0307469_100280632	3300031720	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEALLPIA
Ga0307469_103206362	3300031720	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQSELASFAADLAEALLPIA
Ga0307477_102937691	3300031753	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGLRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELAS
Ga0307477_106225182	3300031753	Hardwood Forest Soil	MDLTPKQATLLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPIAPDTFRVFAEPAYLVDGNLSARITLDGRDYYIWKKQKLEATAARQA
Ga0307475_100141532	3300031754	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSTRITLDGHAYYIWKKQKVEATAARQAELAAFAADLAEALLPVA
Ga0307475_100374935	3300031754	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLGARITLDGHDCYIWKKQKVEATAVRQAELAAFAADLAEALLPVA
Ga0307475_102918871	3300031754	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARIMLDGHDYYIWKKQKVEATAARQAELASFAADLAETLLPVA
Ga0307475_103524882	3300031754	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARTTLDGHDYYIWKKQKLEATSARRAELATFAVDLAEALLPVT
Ga0307475_110079692	3300031754	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELAAFT
Ga0307473_100013511	3300031820	Hardwood Forest Soil	MDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAE
Ga0307473_107910781	3300031820	Hardwood Forest Soil	SILSSGSRAMDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHDYYIWKKQKLEATAARQAELASFAADLAEALLPVA
Ga0307478_100425393	3300031823	Hardwood Forest Soil	MDLSPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPTAPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELTSFAADLSDALLPVD
Ga0307478_103373833	3300031823	Hardwood Forest Soil	MDLTPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRIFAEPAYLVDGNLSARIALDGHDYFIWKKQKLEATAARRAELTSFADDLSEALLPVE
Ga0307478_105938122	3300031823	Hardwood Forest Soil	MDLTPKQAALLQSILSLGFEFASFPVYPNHIGIRRANCAALLSPVAPDTFRVFAEPAYLVDGNLGARITLDGHDCYIWKKQKVEATAVRQAELAAFAADLAEALLHVA
Ga0310909_100648771	3300031947	Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELASFADDLADALLPVE
Ga0307479_1000820911	3300031962	Hardwood Forest Soil	MDLTPKQAVILQRVLSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPESFKMFAEPAYLVDGNLSARIALDGHDYLIWKKQKLEATAARRAELTSFADDLSEALLPVE
Ga0307479_101132583	3300031962	Hardwood Forest Soil	MDLTPKQAALLQRILSLDFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARITLDGHAYYIWKKQKVEATAARQAELAAFAADLAEALLPVA
Ga0307479_104046241	3300031962	Hardwood Forest Soil	MDLTPKQAALLQRILSLGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSTRITLDGHAYYIWKKQKVEATAARQAELAAFAADLAEALLPV
Ga0307479_107652962	3300031962	Hardwood Forest Soil	HPRMDLTPKQAALLQRILSLGFEFASFPVYPNHIGIRRGNCAALLSPVAPDTFRVFAEPAYLVDGNLSARTTLDGHDYYIWKKQKLEATSARRAELATFAVDLAEALLPVT
Ga0318504_101854801	3300032063	Soil	LMDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAVLLAPFVRDTFQVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATAARRAELASFTADLSDALLPVE
Ga0307471_1000113176	3300032180	Hardwood Forest Soil	MDLSHKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTTPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELASFAGDLSDALLPVD
Ga0307472_1000095502	3300032205	Hardwood Forest Soil	MDLSPKQAVILQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPTTPDTFRVFAEPAYLVDGNLSARITLDGHDYFIWKKQKLEATPARRAELASFAGDLSDALLPVD
Ga0307472_1000515952	3300032205	Hardwood Forest Soil	MDLTPKQAAVLQRILSLGFELIAFPVYPNHVGIRRGNCAALLAPVVPDTFRLFAEPAYLVEGNLSARITLDGHDYFIWKKQRLEATPARRAELSAFADDLAEALLPVE
Ga0335085_106110832	3300032770	Soil	ERAVDLTPKQAALLQRLNALGFELVAFPIYPNHVGIRKGNCAALLAPAGADSFEIAAAPSYIVNGNLSARITLDGREHFIWKKEKLEVTAARRNELAAFSSELADALLPVT
Ga0335079_101072514	3300032783	Soil	VDLTPKQAALLQRLNALGFELVAFPIYPNHVGIRKGNCAALLAPAGADSFEIAAAPSYIVNGNLSARITLDGREHFIWKKEKLEVTAARRNELAAFSSELADALLPVT
Ga0335078_108696102	3300032805	Soil	VDLTPKRAALLQRLNALGFELVAFPIYPNHVGIRKGNCAALLAPAGADSFEIAAAPSYIVNGNLSARITLDGREHFIWKKEKLEVTAARRNELAAFSSELADALLPVT
Ga0335080_101659631	3300032828	Soil	FIGERAVDLTPKQAALLQRLNALGFELVAFPIYPNHVGIRKGNCAALLAPAGADSFEIAAAPSYIVNGNLSARITLDGREHFIWKKEKLEVTAARRNELAAFSSELADALLPVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089477

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences