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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F089455 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 109 |
| Average Sequence Length | 64 residues |
| Representative Sequence | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYW |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 109 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.92 % |
| % of genes from short scaffolds (< 2000 bps) | 0.92 % |
| Associated GOLD sequencing projects | 77 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.27 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.349 % of family members) |
| Environment Ontology (ENVO) | Unclassified (27.523 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (68.807 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 27.17% β-sheet: 0.00% Coil/Unstructured: 72.83% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 109 Family Scaffolds |
|---|---|---|
| PF13604 | AAA_30 | 10.09 |
| PF01541 | GIY-YIG | 1.83 |
| PF01068 | DNA_ligase_A_M | 1.83 |
| PF02649 | GCHY-1 | 0.92 |
| PF07927 | HicA_toxin | 0.92 |
| PF01443 | Viral_helicase1 | 0.92 |
| PF08751 | TrwC | 0.92 |
| PF00589 | Phage_integrase | 0.92 |
| COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
|---|---|---|---|
| COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 1.83 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 1.83 |
| COG1469 | GTP cyclohydrolase FolE2 | Coenzyme transport and metabolism [H] | 0.92 |
| COG1724 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family | General function prediction only [R] | 0.92 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300030043|Ga0302306_10348934 | Not Available | 567 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 18.35% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 17.43% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 11.93% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 7.34% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 5.50% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.50% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.59% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 4.59% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.67% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.67% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.75% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.75% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.75% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 2.75% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.83% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.83% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.92% |
| Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.92% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.92% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2170459003 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021046 | Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
| 3300021444 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02 | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027667 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
| 3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027825 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028806 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300029943 | I_Palsa_N3 coassembly | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300030043 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1 | Environmental | Open in IMG/M |
| 3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
| 3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
| 3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
| 3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| E4A_10289160 | 2170459003 | Grass Soil | MNDNVIRGPARSLKEQFSRSSEAWKEQSDPIFRFWTEGDWWGFPFFGLSASRYFGDKETLCLYWPIGTVVI |
| INPhiseqgaiiFebDRAFT_1043702681 | 3300000364 | Soil | MDDNAMRLPVRSLKKQFAKGSEAWDEQSDPIFRFWADGDWWGFPFFSLSASRY |
| JGI1027J12803_1069304693 | 3300000955 | Soil | MNDNVMRVPTRSLKEQFSRASEAWKDQSDPIFRFWADGDWWGFPFFSLSG |
| JGI1027J12803_1093854573 | 3300000955 | Soil | MNVSVIREPSRSLKEQFSRTSESWKEQSDPIFRFWAEGD |
| JGIcombinedJ26739_1014803442 | 3300002245 | Forest Soil | MSDNVMGVPARSLKEQFSRGSEAWQEQSDPIFRFWAEGDWWGFPFFSLTASRYFGDKETLCLYWPLGTVAIT |
| Ga0062386_1001516441 | 3300004152 | Bog Forest Soil | MNDNVIRASARSLKEQFSRGSEAWKEQSDPLFRFWAEGDWWG |
| Ga0062386_1004504421 | 3300004152 | Bog Forest Soil | MSDNMMRVPPRSLKEQFSKGSDAWKEQSDPLFRFWAEGDWWG |
| Ga0062386_1016669722 | 3300004152 | Bog Forest Soil | MSDDVIQAPARSLKEQFSRGTEAWKEQSDPIFRFCAEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVIAGPKVL |
| Ga0066388_1004026141 | 3300005332 | Tropical Forest Soil | MNDNVTRVSVRSLKEQFAKGSEAWEEQSDPIFRFWVDGDWWGFP |
| Ga0070711_1019546411 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MNANVIRVPARSLKEQFSRSSEAWKEQSDPIFQFWAEGDWWGFPFFSLSASRYFGEKETLCLYWPLGTVVI |
| Ga0070708_1012854502 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDNVTRVSVRSLKEQFAKGSDAWKEQSDPIFRFWAEGDWWGF |
| Ga0070707_1003000911 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDNMMRVSVRSLKEQFSRGSEAWKEQSDPIFRFWAEGGWWGFPFFSLSASRYFGDK |
| Ga0070698_1001638342 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDNMMRVSVRSLKEQFSRGSEAWKEQSDPIFRFWVEGDWWGFPFFSLSANRYFGDKEMLCLYWPLGTLVITGPKVLDFYAGF |
| Ga0070697_1003533461 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MNGNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFF |
| Ga0070697_1005027182 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDNVMRVPARSLKEQFSRGSEAWKEQSDPIFRFCAEGDWWGFPFFSISASRYFGHKETLCLYWPLGTVVITGPKVLDFYAGFCA |
| Ga0070697_1005711923 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDNVIRVPARSLKEQFSRGSEAWKEQSDPIFRFSTEGDWWGFPFFSLSASRYFGDK |
| Ga0066903_1037795612 | 3300005764 | Tropical Forest Soil | MNDNVTRVSVRSLKEQFSRGSEAWKDQSEAIFRFWAEGDCWGFPFFSITASRYFGDRDTLCLYWPLGT |
| Ga0066903_1081679012 | 3300005764 | Tropical Forest Soil | MNDNTMRVSARSLKEQFSKGSEAWNEQLDPIFRFRAKGDWWGFPFFSLSASRYFGDKE |
| Ga0070766_105336082 | 3300005921 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVIAG |
| Ga0070715_104701411 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MNANVIRVPARSLKEQFSRSSEAWKEQSDPIFRFCAEGDWWGFPFFSLSAS |
| Ga0070712_1007000901 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MNGNVIRVPARSLKEQFSKGSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKET |
| Ga0070712_1016865231 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MNANVIRVPARSLKEQFSRSSEAWKEQSDPIFQFWAEGDWWGFPFFSLSASRYFGEKETLCLYWPLGTVVIAGPKVLDFYAGFC |
| Ga0070765_1006334873 | 3300006176 | Soil | MNGSVIREPSRSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKEMLCLYWPLGTVVVRVRRR* |
| Ga0070765_1014956551 | 3300006176 | Soil | MNDNLIRAPARSLKEQFSKSSEAWQEQSDPIFRFWAEGDWWGFPFFSLSASRYF |
| Ga0073928_106076961 | 3300006893 | Iron-Sulfur Acid Spring | MSDNVVPARSLKEQFSPGSEAWKERSDPIFRFCAEGDWWGFPFFSLSASRYFCDKETLCLYWPLGTVVITGPKVLNFYTGFCAHRATSLKCD |
| Ga0074046_100294751 | 3300010339 | Bog Forest Soil | MNDNVMRVQSRSLKEQFSKGSDAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKETLCLYWPL |
| Ga0074046_104071422 | 3300010339 | Bog Forest Soil | MSDNVIRAPTRSLKEQFSRGSEAWKEQSDPIFRFRAEGDWWGFPFY |
| Ga0074044_108076011 | 3300010343 | Bog Forest Soil | MSDSLVRVPARSLKEQFSRGSEAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFSEKEALCLYWPLGKNS* |
| Ga0126370_122214021 | 3300010358 | Tropical Forest Soil | MNDNVTRVSVRSLKEQFAKGSEAWEEQSDPIFRFWVDGDWWGFPFFSLSASRYFG |
| Ga0134125_127721501 | 3300010371 | Terrestrial Soil | MNGNVIRMPARSLKEQFSRSSEAWKEQSDPIFWFWAEGDWWDFPFFDLSASRYFCDKETVCLNWPLGTVIITGPKVLDFYAGFCAHRATSPK |
| Ga0126381_1002565881 | 3300010376 | Tropical Forest Soil | MNDNMTRVSVRSLKDQFSRGLEAWKEQSDPIFRFLAEGDWWGFP |
| Ga0136449_1039152031 | 3300010379 | Peatlands Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYWPLGT |
| Ga0126383_103474141 | 3300010398 | Tropical Forest Soil | MRDNLIRVPIRSLKEQFSRGSDAWKEQSDPIFRFWVDGDWWGFPFFSLSASRYFGERETLCLYWPVGSVLITGPKVLDFYVAFCAHRAT |
| Ga0137388_120384833 | 3300012189 | Vadose Zone Soil | MSDNLIRVPARSLKEQFSKGSAAWKEQSDPIFRFWAEGDWWGFPFFSLNA |
| Ga0137390_110731071 | 3300012363 | Vadose Zone Soil | MSDNVMRVPSRSLKEQFSKGSDAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVITGPKVLDFYAGFCAHR |
| Ga0137398_109416003 | 3300012683 | Vadose Zone Soil | MNGNVIRVPARSLKEQFSKGADAWKEQSDPVFRFCTEGDWWGFPFFSL |
| Ga0126375_107766801 | 3300012948 | Tropical Forest Soil | MNDNVTRVSARSLKEQFSRGSEAWKEQSDPIFRFLAEGDWWGFPFFGLSASRYFGDKEMLSLYWPLGTLVITGPKVLDFYAE |
| Ga0164298_110581532 | 3300012955 | Soil | MNGSVIREPLRALKEQFSRSSEAWKEQADPIVRFWAEGDWWGF |
| Ga0164303_111565752 | 3300012957 | Soil | MNGSIIRELSRSLKEQISRSSEAWKEQPDPIFRFWAE |
| Ga0164302_107211491 | 3300012961 | Soil | MNANVIRVPARSLKEQFSRSSEAWKEQSDPISRFWAEGDWWGFPFFSLSASRY |
| Ga0164306_108561712 | 3300012988 | Soil | MNGSVIRESSRSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVITGPKVLDFYSGFCAHR |
| Ga0182036_100569911 | 3300016270 | Soil | MSDNTIRVPTRSLKEQFSRGSEAWKEQSDPIFRFWTDGDWWGVPFFSLNASRYLGEKETLCLYWPFGTL |
| Ga0182041_104838341 | 3300016294 | Soil | MNDNTMRVSARSLKEQFSKGSEASNEQLDPIFRFRAKGDWWGF |
| Ga0182041_111597502 | 3300016294 | Soil | MRDNLIQVPIRSLKEQFSRGSDAWKEQSDPIFRFWADGDWWGLPFFSLSASRYFGERDAVSLLA |
| Ga0182041_114757191 | 3300016294 | Soil | MNDNVMQMPARSLKEQFSKGFEAWKEQLDPIFRFRAEGDWWG |
| Ga0182035_101869172 | 3300016341 | Soil | MSDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLDF |
| Ga0182032_111960191 | 3300016357 | Soil | MSGNTIRVPTRSLKEQFSRGSEAWKEQSDPIFRFWTDGDWWGVPFFS |
| Ga0182034_105016861 | 3300016371 | Soil | MNDNTMRVSARSLKEQFSKGFEAWKEQLDPIFRFRAKGDWWGFPFFSLSASRYFGDKETLCL |
| Ga0182040_104546901 | 3300016387 | Soil | MPVGGPTRSLKEQFSRASEAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKGILCLY |
| Ga0210399_101795711 | 3300020581 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWADGDWWGFPFFSLSAS |
| Ga0210401_109131033 | 3300020583 | Soil | MSDNLIHTPARSLKEQFSRGSEAWKDQSDPIFRFWQRGDW |
| Ga0210401_113238592 | 3300020583 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVIAGPKVLDFYAGFCAHRATCLK |
| Ga0215015_104715762 | 3300021046 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYWP |
| Ga0210405_110890351 | 3300021171 | Soil | EQFSRGSEAWKEQSDPIFRFLAEGDWWGFPFFSLSASRYFGDKEILCLYWPLGTVVITGPKVLDFYAGFVLTGQRVSRQMEKTSKS |
| Ga0210393_109503202 | 3300021401 | Soil | MNGNVIRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRY |
| Ga0210387_101200181 | 3300021405 | Soil | MNGSVIREPSRSLKEQFSRSSEAWKKQSDPILRNTLSLL |
| Ga0210387_107675132 | 3300021405 | Soil | MNDSVIRVPARSLKEQFSRSSEAWKEQSDPVFRFWAEGDWW |
| Ga0210386_108716752 | 3300021406 | Soil | MNANLIPMTARSLKEQFSRSSEAWKEQSDPIFRFWAEGDCWGFPFFSLSASRYFGDKETLCL |
| Ga0213878_105375261 | 3300021444 | Bulk Soil | MRMSARSLKEQFSRGSDSWKEQSDPIFRFWAAGDWWGFPFLSLSASRYFGDKETLCLYWPLGTVVIRGSKVLDFYAGFCAHR |
| Ga0210390_115667851 | 3300021474 | Soil | MNGSVIREPSRSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSAS |
| Ga0210410_108702931 | 3300021479 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYW |
| Ga0212123_104371021 | 3300022557 | Iron-Sulfur Acid Spring | MNDNLIRAPARSLKEQFSKSSEAWQEQSDPIFRFWAEGDWWGFPFFSLSASRYFSE |
| Ga0207692_111975922 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDNVIRVPARSLKEQFSRSSGAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETLCLYWPLGTVVIAGPKVLDFYAG |
| Ga0207663_107752061 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MNGNVSQLPARSLKEQFSRSLEAWKEQSDPSFRFCAEGDWWGFPFFSLSASRYFGEKETLCLYWPLGTLVIAGPKVLD |
| Ga0207700_117689392 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | MNGNVIRVPARSLKEQFSRSSEAWKEQSDPIFQFWAEGDWWGFPFFSLSASRYFGEKETLCL |
| Ga0209217_12187551 | 3300027651 | Forest Soil | MSDNVMGVPARSLKEQFSRGSEAWQEQSDPIFRFWAEGDWWGFPFFSLTASRYFGDKETLCLYWPLGTVAITGPKVLDFYAGFCAHHRFRNLCRQPL |
| Ga0209009_10381512 | 3300027667 | Forest Soil | MNGNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLS |
| Ga0207862_10554832 | 3300027703 | Tropical Forest Soil | MNDNMMRAPARPLKEQFSRGSEAWKEQSDPIFRFWAEGDW |
| Ga0209656_104615612 | 3300027812 | Bog Forest Soil | MSDNVLRVPTRSLKEQFSRGSEAWKEQSDPIFRFRAEGDWWGFPFYSLSASRYFSNKETLCLYWPLGTLLITGPKVLDFYAGFCAHRAT |
| Ga0209039_100278685 | 3300027825 | Bog Forest Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWG |
| Ga0209039_102165641 | 3300027825 | Bog Forest Soil | MSDNVIRAPARSLKEQFSKGSEAWKEQSDPIFRFWTEGDWWGFPFFSLAANRYFGDRETLCLYWPLGTVVITGPKVLDFYAGF |
| Ga0209526_102108523 | 3300028047 | Forest Soil | MSDNVIRAPARSLKEQFSRGSEAWKEQSDPIFRFWTEGD |
| Ga0209526_106672132 | 3300028047 | Forest Soil | MNGSVIRSPSRSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLIASRYFGEKETLCLYWPLATVVIAGP |
| Ga0302221_101465691 | 3300028806 | Palsa | MNGSVIREPSRSLKEQFSRSSEAWKEQSDRIFRFWAGGDWWGFP |
| Ga0308309_108170322 | 3300028906 | Soil | MSDSLVRVPARSLKEQFSRGSAAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFG |
| Ga0308309_115124122 | 3300028906 | Soil | MNDNVIRVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGDKETRCLISRLG |
| Ga0222749_101598611 | 3300029636 | Soil | MSDNVIRAPARSLKEQFSKGSEAWKEQSDQIFRFSTEGDWWGFPFFSLTASRYFGDRQTLCLYWALGTVVITGPKVL |
| Ga0222749_106029721 | 3300029636 | Soil | MSDNVIRVPARSLKEQFSRGSEAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFG |
| Ga0311340_107145381 | 3300029943 | Palsa | MSDNVIREPARSLKEQFSRCSDAWKEQSDPIFRFWTDGDWWGFPFFSLIASRYFGDKETLCLYWPLGTVVITGPKVLDFYSGFCAHRATC |
| Ga0311338_103911631 | 3300030007 | Palsa | MNGSVIREPSRSLKEQFSRSSEAWKEQSDRIFRFWAGGDWWGFPFFSLSASRYFGDK |
| Ga0302306_103489341 | 3300030043 | Palsa | MNGSVIREPSRSLKEQFSRSSEEWKEQSDPIFRFWADGDWWGLPVFSLSASRYFGEKQTFCLYWPLASVVIAGPKVLDFYAGFCAHQATCLKA |
| Ga0311353_106664342 | 3300030399 | Palsa | MNGKVIQVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGAKETLCLYWPLGTVIIAGPKVLDF |
| Ga0311353_111900502 | 3300030399 | Palsa | MNGSVIREPSRSLKEQFSRSSEAWKEQSDRIFRFWAGGDWWGFPFFSLSASRYFGDKETLCLY |
| Ga0311356_112471472 | 3300030617 | Palsa | MNDSVIRVPARSLKEQFSRSSEAWKEQSDPVFRFWAEGDWWGFPFFSLNAGRYFGDKGTLCLYWPLGTVVITGPKVLDFYFG |
| Ga0302325_108657272 | 3300031234 | Palsa | MNGKVIQVPARSLKEQFSRSSEAWKEQSDPIFRFWAEGDWWGFPFFSLSASRYFGAKETLCLYWPLGTVIIAG |
| Ga0318561_104267492 | 3300031679 | Soil | MNDNMMRVPARSLKEQFSRASETWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKGILCLYW |
| Ga0310686_1125791242 | 3300031708 | Soil | MSDNVIRVSTRSLKEQFSRGSEAWKEHSDPIFRFATEGDWWGFPFFSLSASR |
| Ga0306917_115713082 | 3300031719 | Soil | MNDNVTRVSVRSLKEQFAKGSDAWKEQSDPIFRFWAEGDWWGFP |
| Ga0318493_106912631 | 3300031723 | Soil | MSDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLDFY |
| Ga0306918_108057771 | 3300031744 | Soil | MNDNVTRVSVRSLKEQFSRGSEAWREQSDPIFRFLAEGDWWGFPFFSLS |
| Ga0307473_109970052 | 3300031820 | Hardwood Forest Soil | MNDNVMRVPARSLKEQFSRGSEAWKEQSDPIFRFCAEGDWWGFPFFSISASRYFGHKETLCLYWP |
| Ga0307478_111747151 | 3300031823 | Hardwood Forest Soil | MNGNLIRVPARSLKEQFSRSSEAWKEQSDPIFRFLADGDW |
| Ga0306919_101763051 | 3300031879 | Soil | MNDNMMRVPARSLKEQFSRASETWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKGILCLYWSLGTIVITGPKVLDFYDGFCAHR |
| Ga0306919_113051982 | 3300031879 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLD |
| Ga0306925_118097192 | 3300031890 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKET |
| Ga0306923_119901001 | 3300031910 | Soil | MSDNVMRVPTRSLKEQFSRGSEAWNEQSDPIFRFWADGDCWGFPFFSLSASRYFGDKETLCL |
| Ga0306921_102162192 | 3300031912 | Soil | MNDNVMRAPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLDF |
| Ga0306921_106312695 | 3300031912 | Soil | MPVGGPTRSLKEQFSRASEAWKEQSDPIFRFWTEGDWWGFPFFSLSASRYFGDKGILCLYWSL |
| Ga0310916_102898282 | 3300031942 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLDF |
| Ga0310916_110942171 | 3300031942 | Soil | MNDNVTRVSVRSLKEQFAKGSDAWKEQSDPIFRFWAEGDWWGFPFFNLSASRYFSDRETLCLYWPLGTVVITGPKVLDFLAGFCAHRAT |
| Ga0310910_109139002 | 3300031946 | Soil | MQKRRRNNETEVMNDNVTRVSVRSLKEQFSRGSEAWREQSDPIFRFLAEGDWWGFPFFSLSASRY |
| Ga0306922_123760922 | 3300032001 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETLCLYWPLGAVLITGPKVLDFYAEFCAH |
| Ga0310911_107088932 | 3300032035 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLNASRYFGDKETLCLYWPLGAVLITGPKVLDFYAGFCAHRA |
| Ga0318533_103330511 | 3300032059 | Soil | MNDNVMRVPTRSLKEQFSRGSEAWKEQSDPIFRFWAEGDWWGFPLFSLSASRYFGDKETL |
| Ga0306924_109181492 | 3300032076 | Soil | MQKRRRNNETEVMNDNVTRVSVRSLKEQFSRGSEAWREQSDPIFRFLAEGDWWGFPFFSLSASLYFGDKEMLSLYWPLGTLVITGPKVLDFYAGFCSQRAT |
| Ga0311301_105119674 | 3300032160 | Peatlands Soil | MSDNVVRVPVRSLKEQFSRGSEAWKEQSDPIFRFWTDGDW |
| Ga0307471_1036160811 | 3300032180 | Hardwood Forest Soil | MNDNVTRVSVRSLKEQFAKGSDAWKEQSDPIFRFWADGDWWGFPFFSLSASRYFNDRETLCLYWPLWTVVIT |
| Ga0306920_1018399681 | 3300032261 | Soil | MRVPTRSLKEQFSRGSEAWKEQSDPIFRFWADGDCWGFPFFSLSASRYFGDKETLCLYWPLGTLIITGSKVL |
| Ga0310914_106859341 | 3300033289 | Soil | MSDNVTRVSVRSLKEQFSRGSEAWKEQSEPIFRFWAEGDWWGFPFYSLSASRYFGDKDTLCLYWPLGTIVVTGPKVMDF |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |