NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089443

Metagenome Family F089443

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089443
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 105 residues
Representative Sequence LPDIASVLLVTSVLLVIAFVLLTVSLMRLRRTTRELQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKNEMRRQA
Number of Associated Samples 100
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.85 %
% of genes near scaffold ends (potentially truncated) 96.33 %
% of genes from short scaffolds (< 2000 bps) 88.07 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.330 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.018 % of family members)
Environment Ontology (ENVO) Unclassified
(33.945 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.798 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 70.00%    β-sheet: 0.00%    Coil/Unstructured: 30.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF02401LYTB 11.01
PF01575MaoC_dehydratas 7.34
PF08282Hydrolase_3 1.83
PF02585PIG-L 0.92
PF028262-Hacid_dh_C 0.92
PF00990GGDEF 0.92
PF06271RDD 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG07614-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspHLipid transport and metabolism [I] 22.02
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 1.83
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 1.83
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 1.83
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 1.83
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 1.83
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.92
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.33 %
UnclassifiedrootN/A3.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001089|JGI12683J13190_1009524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium933Open in IMG/M
3300001164|JGI11823J13286_1015191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium570Open in IMG/M
3300001361|A30PFW6_1121106All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300001538|A10PFW1_10471891All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300002561|JGI25384J37096_10128857All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300002915|JGI25387J43893_1043344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus620Open in IMG/M
3300005167|Ga0066672_10571373All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300005172|Ga0066683_10004034All Organisms → cellular organisms → Bacteria6839Open in IMG/M
3300005174|Ga0066680_10037104All Organisms → cellular organisms → Bacteria2795Open in IMG/M
3300005184|Ga0066671_10803476All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300005526|Ga0073909_10502129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300005545|Ga0070695_100274450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1236Open in IMG/M
3300005557|Ga0066704_10061282All Organisms → cellular organisms → Bacteria2401Open in IMG/M
3300005557|Ga0066704_10077245All Organisms → cellular organisms → Bacteria2154Open in IMG/M
3300005557|Ga0066704_10240814All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300005557|Ga0066704_10352316All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300005558|Ga0066698_10766626All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005568|Ga0066703_10232265All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300005586|Ga0066691_10381248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium836Open in IMG/M
3300006034|Ga0066656_10831533All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300006041|Ga0075023_100158952All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300006047|Ga0075024_100720106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria550Open in IMG/M
3300006163|Ga0070715_10974405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium527Open in IMG/M
3300006172|Ga0075018_10752458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium531Open in IMG/M
3300006794|Ga0066658_10415078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae731Open in IMG/M
3300006796|Ga0066665_11315575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium555Open in IMG/M
3300006864|Ga0066797_1129164All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300006903|Ga0075426_10731622All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300009038|Ga0099829_11054597All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300009088|Ga0099830_10845306All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300009661|Ga0105858_1067306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium928Open in IMG/M
3300010047|Ga0126382_10709485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium845Open in IMG/M
3300010333|Ga0134080_10186099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium894Open in IMG/M
3300011270|Ga0137391_10077840All Organisms → cellular organisms → Bacteria2856Open in IMG/M
3300011401|Ga0153984_1114161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300011998|Ga0120114_1008641All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300011999|Ga0120148_1009673All Organisms → cellular organisms → Bacteria2403Open in IMG/M
3300012014|Ga0120159_1174380All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012096|Ga0137389_11218781All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012189|Ga0137388_10466047All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300012189|Ga0137388_11006209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium769Open in IMG/M
3300012202|Ga0137363_11828735All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300012206|Ga0137380_11498360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300012207|Ga0137381_11492463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium568Open in IMG/M
3300012208|Ga0137376_11616270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium539Open in IMG/M
3300012211|Ga0137377_10889208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium822Open in IMG/M
3300012211|Ga0137377_11522448All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012361|Ga0137360_10664800All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300012362|Ga0137361_10019809All Organisms → cellular organisms → Bacteria5092Open in IMG/M
3300012363|Ga0137390_10060036All Organisms → cellular organisms → Bacteria3704Open in IMG/M
3300012917|Ga0137395_11296205All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012918|Ga0137396_10625228All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300012918|Ga0137396_10897412All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012918|Ga0137396_10950160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium626Open in IMG/M
3300012975|Ga0134110_10241511All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300012977|Ga0134087_10224840All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300014052|Ga0120109_1012628All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300014150|Ga0134081_10270587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300014157|Ga0134078_10105842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1058Open in IMG/M
3300014827|Ga0120171_1135648All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300015079|Ga0167657_1003698All Organisms → cellular organisms → Bacteria2389Open in IMG/M
3300015241|Ga0137418_10941988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium630Open in IMG/M
3300015356|Ga0134073_10363145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium536Open in IMG/M
3300017656|Ga0134112_10171644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium840Open in IMG/M
3300018468|Ga0066662_10258794All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300019883|Ga0193725_1119191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium604Open in IMG/M
3300019885|Ga0193747_1110332All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300020004|Ga0193755_1053782All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300021046|Ga0215015_10324936All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300021080|Ga0210382_10257262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium764Open in IMG/M
3300021479|Ga0210410_10423908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1191Open in IMG/M
3300022557|Ga0212123_10292551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1143Open in IMG/M
3300025579|Ga0207927_1095986All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300025604|Ga0207930_1034568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1334Open in IMG/M
3300025910|Ga0207684_10327543All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300025910|Ga0207684_11117202All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300025922|Ga0207646_10419170All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300026223|Ga0209840_1051955All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300026297|Ga0209237_1289516All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300026320|Ga0209131_1370662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium533Open in IMG/M
3300026322|Ga0209687_1289662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium517Open in IMG/M
3300026332|Ga0209803_1177734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium803Open in IMG/M
3300026334|Ga0209377_1270168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium561Open in IMG/M
3300026499|Ga0257181_1062715All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300026529|Ga0209806_1206167All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300026536|Ga0209058_1145474All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300026547|Ga0209156_10245242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium834Open in IMG/M
3300026550|Ga0209474_10167271All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300026550|Ga0209474_10612256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium558Open in IMG/M
3300026551|Ga0209648_10833892All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300027181|Ga0208997_1042639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium670Open in IMG/M
3300027388|Ga0208995_1081996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300027535|Ga0209734_1042519All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300027645|Ga0209117_1169449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium563Open in IMG/M
3300027651|Ga0209217_1118795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium746Open in IMG/M
3300027898|Ga0209067_10945784Not Available508Open in IMG/M
3300027910|Ga0209583_10175274All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300027911|Ga0209698_10840584All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300027915|Ga0209069_10452264All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300028673|Ga0257175_1058032All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300028811|Ga0307292_10220922All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300031671|Ga0307372_10276487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium972Open in IMG/M
3300031720|Ga0307469_10705004All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300031820|Ga0307473_10955215All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300031962|Ga0307479_11140895All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300032180|Ga0307471_100987085All Organisms → cellular organisms → Bacteria1009Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.02%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.35%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.42%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost6.42%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.59%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.75%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.92%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.92%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.92%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001089Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3EnvironmentalOpen in IMG/M
3300001164Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1EnvironmentalOpen in IMG/M
3300001361Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002915Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009661Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011401Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaGHost-AssociatedOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015079Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025579Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026223Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12683J13190_100952413300001089Forest SoilLDLAGVLLITSVLLIPALLLLVFSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQPTKAQLHREAEYNLAHRARG
JGI11823J13286_101519113300001164Forest SoilLDLAGVLLIVSVLLVFAFLLLTVSLMRLRGTTRQLQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQQDKTEMKREAEYNLTPRARGALR
A30PFW6_112110623300001361PermafrostMTDFDPGRVSLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAAYGLTHRPRGSV
A10PFW1_1047189113300001538PermafrostLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAAYGLTHRPRGSV
JGI25384J37096_1012885723300002561Grasslands SoilLLDISAVLLVTSVMFIVAVVLLTLALMRMRGMTHRLQGALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQYGLTHRPR
JGI25387J43893_104334413300002915Grasslands SoilLDLAAVLLIVAVAFVIALVLLTVSLMRNRVTTRELEAAFADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMHREASYNLTNRARGG
Ga0066672_1057137313300005167SoilVPDVASVLLITSVLFIVAVVLLTIALMRMRSMTSRLQLALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRTMGAVAGAMYLVVPGKTEMRRQAQFGLTT
Ga0066683_1000403493300005172SoilLDLAAVLLVVSVLFVIAFILLTVSLMRQRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMYREASYNLTTR
Ga0066680_1003710413300005174SoilVPDVASVLLITSVLFIIAVVLLTIALMRMRSMTSRLQLALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQFGLTTR
Ga0066671_1080347623300005184SoilVDLAAVLLVVSGLLVVASILLTVLVVRLRGTTRELERALAEQSGTRDRAALLLAVASAVNSSLGLSEVLHVAVTQAGRLMGAVAGAMYLVAPGK
Ga0073909_1050212913300005526Surface SoilVPDIASVLLVTSILLVIAFVLLTVSLMRLRRTTRQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKAEMRRQA
Ga0070695_10027445023300005545Corn, Switchgrass And Miscanthus RhizosphereLELAGVLLVTSVLLVFAFLLLTVSLMRLRGTTRDLQAALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQPDKADMKREGEYNLAHRARGAIRKI
Ga0066704_1006128243300005557SoilVELAGVLLVTSVLLVIAFILLTVSLMRLRGTAQELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRIGKAEMYREASYNLTNRARGGV
Ga0066704_1007724513300005557SoilLPDVASVLLITSVLFIIAVVLLTIALMRMRSMTSRLQMALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQF
Ga0066704_1024081443300005557SoilLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLV
Ga0066704_1035231623300005557SoilVPDIASVLLVTSILLVVAFVLLTVSLWRLRRTTRQLEAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLMTPGTNEMRREAEYNL
Ga0066698_1076662613300005558SoilMEPAGILLIVSVLLVAAFILLTLSLMRLRGTARELEAALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGKTELYREASYNLTNRA
Ga0066703_1023226513300005568SoilLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQYGLTHRPRGSVRALTEE
Ga0066702_1004521443300005575SoilVDLAAVLLVASGLLVLALILLTVAMMRLRATTRELEQALSEQSGSRDRAGLLLAVASAVNSSLGLSEVLHVAVTQAGRLMGAVAGAMYLVAPGKAEMRRQ
Ga0066691_1038124823300005586SoilLEPAGVLLVVSFLLVVAFVLLTISLMRLRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMYREASYNLT
Ga0070717_1127398823300006028Corn, Switchgrass And Miscanthus RhizosphereMDLSAVLLVVSGLLVLALVLLTVVVVRLRGTTRELEAALAERSGTGDRASLLLKVAEAVNSSLAINDVLNVALTQAGRLVGAVAGAIYLNAPGKGEM
Ga0066656_1083153323300006034SoilVELAGVLLVVSVLLVLAFILLTVSLMRLRGTTRELEATLADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRSGKAEMYREASYNLT
Ga0075023_10015895213300006041WatershedsLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQAALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAQYGLTHR
Ga0075024_10072010623300006047WatershedsLEPAGVLLITSGLLVVALVLLTVSLMRLRGTAQELKAALEDESGARDREGSLLQMAIAVNSALSLKEVLDVALTQAGESMKAAAGAMYLVKPGTVEMHRQAWYRIK
Ga0070715_1097440513300006163Corn, Switchgrass And Miscanthus RhizosphereLDLAAVLLVVSVLFVIAFLLLTVTLMRQRGTARELEAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRT
Ga0075018_1075245823300006172WatershedsLDLAGVLLVTSVLLVIAFVLLTVSLMRLRRTTQELQAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTTGKAEM
Ga0066658_1041507813300006794SoilLEPAGVLLVVSFLLVVAFVLLTISLMRLRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMYREASYNLTNRARGGIR
Ga0066665_1131557513300006796SoilLEPAGVLLVVSVLLVVAFVLLTISLMRLRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVR
Ga0066797_112916423300006864SoilLDLAAVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGSMYLVQQDKAEMHR
Ga0075426_1073162223300006903Populus RhizosphereMEPAGILLIVSVFLVAALMLLTLSLMRLRGATRKLEATLADETGARDRSDLLIALISAVNSSLALEEVLNVALTHIGRVMGAVAGAMYLVRP
Ga0099829_1105459713300009038Vadose Zone SoilMASSNPGRVSVPDIASVLLITSVLFIIAVILLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTEMRRQAQYGLTHRPRG
Ga0099830_1084530613300009088Vadose Zone SoilLFDISAVLLVTSVLFIVAVVLLTIALMRMRGMTARLQAALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKAEMRRQAQYGLTHRPRGTVRAL
Ga0105858_106730623300009661Permafrost SoilVPDIASVLLVTSILLVIAFVLLTVSLMRLRRTTRQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLMTPGTNEMRREAEYNL
Ga0126382_1070948523300010047Tropical Forest SoilMEPAGILLAVSVLLVAALILLTLSLIRIRGTTRELEAALADESGARDRARLLLTIAEAVNSSLSLEDVLNVALTQPGRLIGAVAGAMYLVRPGKAELYREASYNLTNRARGGTRN
Ga0134080_1018609913300010333Grasslands SoilMEPAGILLIVSVLLVAAFILLTLSLMRLRGTARELEAALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGKTELYRE
Ga0137391_1007784013300011270Vadose Zone SoilLDLAAVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVKQGKAEMHREAEYNLTHR
Ga0153984_111416123300011401Attine Ant Fungus GardensMDLAAVLLIVSVALLFAIVLLTVSLMRNRGTALELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTNAGRIMGAVAGAMYLVRTGKTEMHREASYN
Ga0120114_100864113300011998PermafrostLDLAGVLLVTSVLLIPALLLLVFSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQPTKAQLHREAEYN
Ga0120148_100967343300011999PermafrostGRAEYSPNNPAVRGVNLGQLKRGGSVPDIASVLLVTSILLVVAFVLLTVSLMRLRRTTRQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYXXXXXXXX
Ga0120159_117438013300012014PermafrostMTDFDPGRVSLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEM
Ga0137389_1121878113300012096Vadose Zone SoilVTSVLFIMAVVLLTIALMRLRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKGEMRRQA
Ga0137388_1046604713300012189Vadose Zone SoilMASSNPGRVSVPDVASVLLITSVLFIIAVILLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTDMRRQ
Ga0137388_1100620923300012189Vadose Zone SoilLDLTAVLLITSVLLVGAFLLLTISLMRLRGTTNELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVAMTHAGRIMGAVAGAMYLVRAGKAEMHREA
Ga0137363_1182873513300012202Vadose Zone SoilVYLDIASVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMSLVVPGKAEMRRQAAYGLTHRPRG
Ga0137380_1149836013300012206Vadose Zone SoilLELAAVLLVVSVLLVIGLVVLTVSLMRRHGTANELEAALGDASGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGKADL
Ga0137381_1149246313300012207Vadose Zone SoilVELAGVLLITSVLLVIAFILLTISLMRLRGTAHELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMCLVRTGKAEMYREASYNLTNR
Ga0137376_1161627013300012208Vadose Zone SoilLELAGVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQSALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVEPGKTDMKREGEY
Ga0137377_1088920823300012211Vadose Zone SoilLPDIASVLLVTSILLVVAFVLLTVSLMRLRRTTRDLQAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKNEMRREAEYNLANRAKGAVR
Ga0137377_1152244823300012211Vadose Zone SoilVPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTEMRRQAQYGLTHRPRGGVRALS
Ga0137360_1066480013300012361Vadose Zone SoilMTNSDPGRVYLDIASVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAAYGLTHRPRGSVRPLT
Ga0137361_1001980913300012362Vadose Zone SoilMTNSDPGRVYLDIASVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPCKAEMRRQAAYGF
Ga0137390_1006003613300012363Vadose Zone SoilMASSNPGRVSVPDIASVLLITSVLFIIAVILLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLV
Ga0137395_1129620513300012917Vadose Zone SoilVLFIIALVLLTIALMRMRGMTRRLQAALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGAMYLVVPGKAEMRRQAQYGLTHRPRGSVRALSEEPLRSAL
Ga0137396_1062522813300012918Vadose Zone SoilLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQYGLTHRPRGSVRALSE
Ga0137396_1089741213300012918Vadose Zone SoilLDIASVLLVTSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKA
Ga0137396_1095016023300012918Vadose Zone SoilLEPAGVLLVVSVLLVVAFVLLTVSLMRLRGTARELEAALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMYREASYNLTTR
Ga0134110_1024151123300012975Grasslands SoilMEPAGILLIVSVLLVAAFILLTLSLMRLRGTARELEAALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGK
Ga0134087_1022484023300012977Grasslands SoilVTLVLLVAAFILLLISLIRLRGATRELEAALADESGARDRASLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRIESCHRLTPRTCS*
Ga0120109_101262813300014052PermafrostLDLAGVLLIVSVLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLMTPGTNEMRRE
Ga0134081_1027058723300014150Grasslands SoilVELAGVLLVTSVLLVIAFILLTVSLMRLRGTAQELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRIGKAEMYREA
Ga0134078_1010584223300014157Grasslands SoilLELAAVLLVVSVLLIIALVTLTLSLMRKRGSASELETALGDASGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGKADLYREASYNLTNRAR
Ga0120171_113564813300014827PermafrostMTDFDPGRVSLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAAYGLTHRPRGS
Ga0167657_100369813300015079Glacier Forefield SoilVPDIASVLLVTSILLVIAFVLLTVSLMRLRRTTRQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLMTPGTNEMRREAEYNLA
Ga0137418_1094198823300015241Vadose Zone SoilLDLTAVLLITSVLLVGAFLLLTISLMRLRGTTNELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVAMTHAGRIMGAVAGAMYLVRAGKAEMHR
Ga0134073_1036314513300015356Grasslands SoilVELAGVLLVVSVLLVLAFILLTVSLMRLRGTTRELEVTLADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRSGKA
Ga0134112_1017164423300017656Grasslands SoilLDLAAVLLVVSVLFVIAFILLTVSLMRQRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRIGKAEMYREASYNLTTRARGG
Ga0066662_1025879413300018468Grasslands SoilMEPAGVLLIVSVLLVAAFILLTLSLMRLRHATRELESALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRMMGAVAGAMYLVRPQKAELYREASYNLTNRARGGVRKP
Ga0193725_111919113300019883SoilLPDIASVLLVTSVLLVIAFVLLTVSLMRLRRTTRELQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKNEMRRQA
Ga0193747_111033223300019885SoilLDLAAVLLVVSVLLVIAFILLTVTLMRQRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVR
Ga0193755_105378213300020004SoilLELAGVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQSALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVEPGKTDMKREGEYNLAHRARGAVRKIEE
Ga0215015_1032493623300021046SoilVPDIASVLLITSVLFIIAVILLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTEMRRQAAYGLTHRP
Ga0210382_1025726213300021080Groundwater SedimentMATQKGRRLLPDIASVLLVTSVLLVIAFVLLTVSLMRLRRTTRQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVSPGTNEMRRQAEYNLSYR
Ga0210410_1042390823300021479SoilLDLAAVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQGGKAEMHREAEYNLTHRARGAIR
Ga0212123_1029255123300022557Iron-Sulfur Acid SpringMTTSGREGFSLDLAGVLLVTSVLLIPVLLLLVFSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVHPDKAEMHREAEYNLTHRARGS
Ga0207927_109598613300025579Arctic Peat SoilLPDLASVLLVTSILLVVAFVLLTVSLMRLRRTTRQLQLALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKAEM
Ga0207930_103456813300025604Arctic Peat SoilLDLAAVLLVTSGLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQQGKAEMHRDAEYNLTPRA
Ga0207684_1032754313300025910Corn, Switchgrass And Miscanthus RhizosphereLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLV
Ga0207684_1111720213300025910Corn, Switchgrass And Miscanthus RhizosphereVPDVASVLLITSVLFIIAVVLLTIALMRMRSMTSRLQLALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVP
Ga0207646_1041917023300025922Corn, Switchgrass And Miscanthus RhizosphereLPDVASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTEMRRQAQYGLTHRPRGSVRALSE
Ga0209840_105195513300026223SoilLDLAAVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVQQ
Ga0209237_128951613300026297Grasslands SoilVPDVASVLLITSVLFIIAVVLLTIALMRMRSMTSRLQLALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGAMYLVVPGKTEMRRQAQFGLTTRARG
Ga0209131_137066213300026320Grasslands SoilLELAGVLLVTSVLLVFAFLLLTVSLMRLRGTTRELQSALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVEPGKTDM
Ga0209687_128966213300026322SoilVEPAGVLLVVSVLLVVAFVLLTVSLMRLRGTTRELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAE
Ga0209803_117773423300026332SoilVELAGVLLVTSVLLVIAFILLTVSLMRLRGTAQELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRIGKAEMYREASYN
Ga0209377_127016823300026334SoilVELAGVLLVTSVLLVIAFILLTVSLMRLRGTAQELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVR
Ga0257181_106271513300026499SoilLDIASVLLVTSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGAMYLVVPGKAEMRRQAQY
Ga0209059_109315813300026527SoilVDLAAVLLVASGLLVLALILLTVAMMRLRATTRELEQALSEQSGSRDRAGLLLAVASAVNSSLGLSEVLHVAVTQAGRLMGAVAGAMYLVAPGKAEMRR
Ga0209806_120616723300026529SoilLDLAAVLLVASGLLLLALILLTVAMMRLRATTRELEQALGEQSGSRDRAGLLLAVASAVNSSLGLSEVLHVAVTQAGRLMGAVAGAMYLVAPGKA
Ga0209058_114547423300026536SoilLGVNLWQLIREGYLPDIASVLLVTSILLVVAFVLLTVLLMRLRRTTRELQLALQDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKAEMLREAE
Ga0209156_1024524213300026547SoilLEPAGVLLVVSFLLVVAFVLLTISLMRLRGTARELEAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTGKAEMY
Ga0209474_1016727113300026550SoilLDLAAVLLVVSVLFVIAFLLLTVTLMRQRGTARELEAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRTG
Ga0209474_1061225613300026550SoilMEPAGILLIVSVLLVAAFILLTLSLMRLRGTARELEAALADETGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVRPGKTELY
Ga0209648_1083389223300026551Grasslands SoilLDIASVLLVTSMLFIIALVLLTIALMRMRGMTRRLQGALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEM
Ga0208997_104263913300027181Forest SoilLPDLASVLLVTSVLLVIAFVLLTVSLMRLRRTTRELQLALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKSEMRRQAEYNVAKRSKGAVRDIEEE
Ga0208995_108199613300027388Forest SoilVFDLSAVLLITFVLLVVAFILLTLSLMRIRGTTRELQAALDDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRILGAVAGAMYLVRPGKSEMHREASYNLT
Ga0209734_104251913300027535Forest SoilLELAGVLLVTSVLLVFAFLLLTVSLMRLRGTTRDLQAALEDESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPGKNEMRRQAEYNLSHRAKGA
Ga0209117_116944913300027645Forest SoilLDPAGVLLVTSVLLVVAFVLLTVSLMRLRRTTQELQAALADESGARDRAALLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTT
Ga0209217_111879523300027651Forest SoilLDLAGVLLVTSVLLIPVLLLLVFSLMRLRGTTRELQAALDDESGARDRAALLLTIASAVNSSLALEEVLNVALTHAGRLMGAVAGAMYLVQTGKAEMNRDAAYNLVP
Ga0209067_1094578413300027898WatershedsLEPDGVLLITSALVVALILLSVALMRLRGTARELSAALEEESGARAREGLLLQMALAVNSKLALTEVLDVALTQAGEIMGAVAGAMYLVKPGAVEMHREAWYKIKE
Ga0209583_1017527413300027910WatershedsLDIAAVLLVTSVLFIIALVLLTIALMRMRGMTRRLQAALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAQYGLTHRPRGSVRRETP
Ga0209698_1084058423300027911WatershedsLDPAGVLLITSVLLVVAMVLLTVSLMRLRGTARELQAALQDESGARDRASLLLSMALAVNSSLALTKVLDVALTQAGDVMGAVAGAIYLVRQGT
Ga0209069_1045226423300027915WatershedsLEPAGVLLITSGLLVVALVLLTVSLMRLRGTAQELKAALEDESGARDREGSLLQMAIAVNSALSLKEVLDVALTQAGESMKAAAGAMYLVKPGTVEMHRQAWYRIKER
Ga0257175_105803213300028673SoilLDIASVLLVTSVLFIIALVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIGHAGRIMGAVAGSMYLVVPGKAEMRRQAAYGLTHRPRGSVRPL
Ga0307292_1022092223300028811SoilLPDIASVLLVTSVLLVIAFVLLTVSLMRLRRTTRELQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLVTPG
Ga0307372_1027648723300031671SoilVPDIASVLLVTSILLVVAFVLLTVSLMRLRRATSQLQAALADESGARDRAGLLLAIASAVNSSLALEEVLNVALTHAGRIMGAVAGAMYLMAPGTNEMRREAEYN
Ga0307469_1070500413300031720Hardwood Forest SoilVDLAAVLLGASVLFVLALVLLTIALIRMRSMTKRLQLALEDESGARDRAALLLAMASAVNSSLGLEEVLNHALRHAGRIMGAVAGSMYLIVPGKTEMRRQATYGLTPRPRGSVRQLHDEP
Ga0307473_1095521523300031820Hardwood Forest SoilLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALEDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVV
Ga0307479_1114089513300031962Hardwood Forest SoilLPDIASVLLITSVLFIIAVVLLTIALMRMRGMTRRLQEALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIRHAGRIMGAVAGSMYLVVPGKTEMRRQAAYGLTHRPRGS
Ga0307471_10098708523300032180Hardwood Forest SoilLLDISAVLLVTSVMFIVAVVLLTLALIRMRGMTQRLQAALDDESGARDRAALLLAMASAVNSSLGLEEVLDVAIKHAGRIMGAVAGAMYL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.